View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF10176_low_29 (Length: 285)
Name: NF10176_low_29
Description: NF10176
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF10176_low_29 |
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Alignment Details
Target: chr4 (Bit Score: 253; Significance: 1e-141; HSPs: 1)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 253; E-Value: 1e-141
Query Start/End: Original strand, 1 - 269
Target Start/End: Original strand, 19146290 - 19146558
Alignment:
| Q |
1 |
aatattttttacagggcacaaacactaccaacaaaagaaaatctcatcccctcaattaaaaaattatttgacctcttaatcttagttacaatagtcagaa |
100 |
Q |
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| T |
19146290 |
aatattttttacagggcacaaacactaccaacaaaagaaaatctcatcacctcaattaaaaaattatttgacctcttaatcttagttacaatagtcagaa |
19146389 |
T |
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| Q |
101 |
ttttttatctttttcccaatcagagtttgatccagctggatgagacgtttacaaagcacatcccttatatcattttggccaacatgcaaaattaatgaca |
200 |
Q |
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| T |
19146390 |
ttttttatcgttttctcaatcagagtttgatccagctggatgagacgtttacaaagcacatcccttatatcattttggccaacatgcaaaattaatgaca |
19146489 |
T |
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| Q |
201 |
tagaaagccaaaaccaactcattcatctttatcattttggctaacaatccaaattttcaacatagaaac |
269 |
Q |
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| T |
19146490 |
tagaaagccaaaaccaactcattcatctttatcattttggctaacaatcaaaattttcaacatagaaac |
19146558 |
T |
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