View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF10178_high_1 (Length: 503)

Name: NF10178_high_1
Description: NF10178
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF10178_high_1
NF10178_high_1
[»] chr4 (10 HSPs)
chr4 (227-484)||(29098248-29098505)
chr4 (186-224)||(9663208-9663246)
chr4 (186-224)||(15323431-15323469)
chr4 (186-224)||(54442228-54442266)
chr4 (187-224)||(32641-32678)
chr4 (187-224)||(18638379-18638416)
chr4 (187-224)||(19675855-19675892)
chr4 (187-224)||(49236545-49236582)
chr4 (186-218)||(45617469-45617501)
chr4 (186-218)||(47465185-47465217)
[»] chr8 (13 HSPs)
chr8 (245-488)||(27021077-27021319)
chr8 (1-115)||(14152471-14152585)
chr8 (174-218)||(14152644-14152688)
chr8 (187-230)||(10761174-10761217)
chr8 (186-224)||(17159113-17159151)
chr8 (187-224)||(116619-116656)
chr8 (187-224)||(22981055-22981092)
chr8 (187-224)||(28004642-28004679)
chr8 (187-224)||(28061944-28061981)
chr8 (187-224)||(36574436-36574473)
chr8 (187-224)||(40628420-40628457)
chr8 (186-230)||(1552732-1552776)
chr8 (186-230)||(12610687-12610731)
[»] chr7 (30 HSPs)
chr7 (245-335)||(38534857-38534947)
chr7 (364-427)||(38535199-38535262)
chr7 (425-488)||(38536209-38536271)
chr7 (186-230)||(16274465-16274509)
chr7 (186-230)||(31079106-31079150)
chr7 (186-230)||(41745085-41745129)
chr7 (186-229)||(43989041-43989084)
chr7 (186-224)||(7881661-7881699)
chr7 (187-229)||(11666753-11666795)
chr7 (186-224)||(12179932-12179970)
chr7 (186-224)||(15093702-15093740)
chr7 (186-224)||(17358249-17358287)
chr7 (186-224)||(22947612-22947650)
chr7 (186-224)||(23774953-23774991)
chr7 (186-224)||(25728436-25728474)
chr7 (186-224)||(30165476-30165514)
chr7 (186-224)||(31079355-31079393)
chr7 (186-224)||(31298793-31298831)
chr7 (186-224)||(47668130-47668168)
chr7 (187-224)||(4098099-4098136)
chr7 (186-223)||(15984426-15984463)
chr7 (186-223)||(18318709-18318746)
chr7 (187-224)||(20033909-20033946)
chr7 (187-224)||(23775138-23775175)
chr7 (187-224)||(24919915-24919952)
chr7 (187-224)||(37101557-37101594)
chr7 (187-224)||(38651786-38651823)
chr7 (186-230)||(11685281-11685325)
chr7 (337-365)||(38535064-38535092)
chr7 (186-230)||(48741828-48741872)
[»] scaffold0098 (1 HSPs)
scaffold0098 (187-230)||(4206-4249)
[»] chr5 (18 HSPs)
chr5 (187-230)||(13006666-13006709)
chr5 (187-230)||(13078685-13078728)
chr5 (186-229)||(14435626-14435669)
chr5 (187-230)||(22833647-22833690)
chr5 (187-230)||(29690711-29690754)
chr5 (186-224)||(10542294-10542332)
chr5 (186-224)||(13078457-13078495)
chr5 (186-224)||(20884035-20884073)
chr5 (186-224)||(21262849-21262887)
chr5 (186-224)||(26006515-26006553)
chr5 (186-224)||(26524638-26524676)
chr5 (187-229)||(29989461-29989503)
chr5 (187-224)||(13003799-13003836)
chr5 (187-224)||(16867762-16867799)
chr5 (187-224)||(29989711-29989748)
chr5 (187-223)||(5105105-5105141)
chr5 (186-230)||(27829951-27829995)
chr5 (186-230)||(39987131-39987175)
[»] chr2 (23 HSPs)
chr2 (185-224)||(2077287-2077326)
chr2 (186-229)||(5529169-5529212)
chr2 (186-229)||(8224386-8224429)
chr2 (187-230)||(20962290-20962333)
chr2 (186-224)||(5513485-5513523)
chr2 (186-224)||(5863188-5863226)
chr2 (186-224)||(12883084-12883122)
chr2 (186-224)||(20101004-20101042)
chr2 (186-224)||(20962046-20962084)
chr2 (186-224)||(22265137-22265175)
chr2 (186-224)||(24388849-24388887)
chr2 (187-229)||(27926930-27926972)
chr2 (186-224)||(33010800-33010838)
chr2 (186-224)||(39257376-39257414)
chr2 (186-224)||(44353904-44353942)
chr2 (187-224)||(2077046-2077083)
chr2 (190-235)||(5513732-5513777)
chr2 (187-224)||(23081040-23081077)
chr2 (187-224)||(34963599-34963636)
chr2 (187-224)||(36202122-36202159)
chr2 (186-230)||(8224633-8224677)
chr2 (186-218)||(8972672-8972704)
chr2 (187-223)||(20891623-20891659)
[»] chr1 (13 HSPs)
chr1 (186-229)||(11586474-11586517)
chr1 (186-224)||(163350-163388)
chr1 (186-224)||(1613838-1613876)
chr1 (186-224)||(6953882-6953920)
chr1 (186-224)||(12886998-12887036)
chr1 (186-224)||(22374564-22374602)
chr1 (186-224)||(45323432-45323470)
chr1 (186-235)||(1819328-1819377)
chr1 (187-224)||(15734476-15734513)
chr1 (187-224)||(51237964-51238001)
chr1 (186-230)||(9403566-9403610)
chr1 (187-223)||(24169110-24169146)
chr1 (187-223)||(28362622-28362658)
[»] scaffold0744 (1 HSPs)
scaffold0744 (186-224)||(1516-1554)
[»] scaffold0235 (1 HSPs)
scaffold0235 (186-224)||(24193-24231)
[»] scaffold0037 (1 HSPs)
scaffold0037 (186-224)||(96689-96727)
[»] scaffold0023 (1 HSPs)
scaffold0023 (186-224)||(125560-125598)
[»] scaffold0009 (2 HSPs)
scaffold0009 (186-224)||(25010-25048)
scaffold0009 (186-223)||(24766-24803)
[»] chr6 (20 HSPs)
chr6 (187-229)||(2965818-2965860)
chr6 (186-224)||(4407870-4407908)
chr6 (186-224)||(9964355-9964393)
chr6 (186-224)||(14597338-14597376)
chr6 (186-224)||(15502529-15502567)
chr6 (186-224)||(15502773-15502811)
chr6 (186-224)||(21383967-21384005)
chr6 (186-224)||(22043525-22043563)
chr6 (186-224)||(27660376-27660414)
chr6 (186-224)||(28039139-28039177)
chr6 (187-224)||(6176694-6176731)
chr6 (187-224)||(6176938-6176975)
chr6 (187-224)||(13788043-13788080)
chr6 (187-224)||(13796662-13796699)
chr6 (187-224)||(18699245-18699282)
chr6 (187-224)||(19591546-19591583)
chr6 (187-224)||(28632013-28632050)
chr6 (186-230)||(9887649-9887693)
chr6 (186-230)||(16840293-16840337)
chr6 (186-230)||(25948626-25948670)
[»] chr3 (18 HSPs)
chr3 (186-224)||(3526784-3526822)
chr3 (186-224)||(6019643-6019681)
chr3 (186-224)||(7014731-7014769)
chr3 (186-224)||(8763901-8763939)
chr3 (186-224)||(9268575-9268613)
chr3 (186-224)||(9268818-9268856)
chr3 (186-224)||(33312580-33312618)
chr3 (187-224)||(5047413-5047450)
chr3 (187-224)||(5154723-5154760)
chr3 (187-224)||(7014974-7015011)
chr3 (187-224)||(7731272-7731309)
chr3 (187-224)||(10265492-10265529)
chr3 (187-224)||(25484118-25484155)
chr3 (187-224)||(37585638-37585675)
chr3 (187-224)||(40004121-40004158)
chr3 (187-224)||(54014559-54014596)
chr3 (186-230)||(16343632-16343676)
chr3 (186-230)||(19271615-19271659)
[»] scaffold0420 (1 HSPs)
scaffold0420 (187-224)||(4491-4528)
[»] scaffold0734 (1 HSPs)
scaffold0734 (186-218)||(2979-3011)
[»] scaffold0284 (1 HSPs)
scaffold0284 (187-223)||(3366-3402)


Alignment Details
Target: chr4 (Bit Score: 235; Significance: 1e-130; HSPs: 10)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 235; E-Value: 1e-130
Query Start/End: Original strand, 227 - 484
Target Start/End: Original strand, 29098248 - 29098505
Alignment:
Q  227 taaagttataatacttacttcctcataaatcaaccgacttgattattatatcagcatttttctt-ggacttcattataagctctgcattgagtctgtcgt 325  Q
    ||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||| ||||||||||||||| |||||||||||||||||||    
T  29098248 taaagttataatacttacttcctcagaaatcaaccgacttgattattatatcagcatttttctttggacttcattataagttctgcattgagtctgtcgt 29098347  T
Q  326 tgttctctattcgctgcttagcaatgtctggaggcttgccagtagagatatgcctcttcaaaactcgctgcattgctttatcaatatcaatatcaataaa 425  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  29098348 tgttctctattcgctgcttagcaatgtctggaggcttgccagtagagatatgcctcttcaaaactcgctgcattgctttatcaatatcaatatcaataaa 29098447  T
Q  426 ccatttctcatcaaacaaagatgaaatctccttccatacccccattttccaagagcaaa 484  Q
    |||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||    
T  29098448 ccatttctcatcaaacaaagatgaaatctccttccata-ccccattttccaagagcaaa 29098505  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 186 - 224
Target Start/End: Complemental strand, 9663246 - 9663208
Alignment:
Q  186 gaaatgacatatattacaggggtgagaaacacttttaac 224  Q
    ||||||||||||||||||||||||| ||||||| |||||    
T  9663246 gaaatgacatatattacaggggtgaaaaacactattaac 9663208  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 186 - 224
Target Start/End: Complemental strand, 15323469 - 15323431
Alignment:
Q  186 gaaatgacatatattacaggggtgagaaacacttttaac 224  Q
    ||||||||||||||||||||||||| ||||||| |||||    
T  15323469 gaaatgacatatattacaggggtgaaaaacactattaac 15323431  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 186 - 224
Target Start/End: Original strand, 54442228 - 54442266
Alignment:
Q  186 gaaatgacatatattacaggggtgagaaacacttttaac 224  Q
    ||||||||||||||||||||||||| ||||||| |||||    
T  54442228 gaaatgacatatattacaggggtgaaaaacactattaac 54442266  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 187 - 224
Target Start/End: Original strand, 32641 - 32678
Alignment:
Q  187 aaatgacatatattacaggggtgagaaacacttttaac 224  Q
    |||||||||||||||||||||||| ||||||| |||||    
T  32641 aaatgacatatattacaggggtgaaaaacactattaac 32678  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 187 - 224
Target Start/End: Original strand, 18638379 - 18638416
Alignment:
Q  187 aaatgacatatattacaggggtgagaaacacttttaac 224  Q
    |||||||||||||||||||||||| ||||||| |||||    
T  18638379 aaatgacatatattacaggggtgaaaaacactattaac 18638416  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 187 - 224
Target Start/End: Original strand, 19675855 - 19675892
Alignment:
Q  187 aaatgacatatattacaggggtgagaaacacttttaac 224  Q
    |||||||||||||||||||||||| ||||||| |||||    
T  19675855 aaatgacatatattacaggggtgaaaaacactattaac 19675892  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 187 - 224
Target Start/End: Original strand, 49236545 - 49236582
Alignment:
Q  187 aaatgacatatattacaggggtgagaaacacttttaac 224  Q
    |||||||||||||||||||||||| ||||||| |||||    
T  49236545 aaatgacatatattacaggggtgaaaaacactattaac 49236582  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 186 - 218
Target Start/End: Complemental strand, 45617501 - 45617469
Alignment:
Q  186 gaaatgacatatattacaggggtgagaaacact 218  Q
    ||||||||||||||||||||||||| |||||||    
T  45617501 gaaatgacatatattacaggggtgaaaaacact 45617469  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 186 - 218
Target Start/End: Complemental strand, 47465217 - 47465185
Alignment:
Q  186 gaaatgacatatattacaggggtgagaaacact 218  Q
    ||||||||||||||||||||||||| |||||||    
T  47465217 gaaatgacatatattacaggggtgaaaaacact 47465185  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 196; Significance: 1e-106; HSPs: 13)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 196; E-Value: 1e-106
Query Start/End: Original strand, 245 - 488
Target Start/End: Complemental strand, 27021319 - 27021077
Alignment:
Q  245 ttcctcataaatcaaccgacttgattattatatcagcatttttcttggacttcattataagctctgcattgagtctgtcgttgttctctattcgctgctt 344  Q
    ||||||| ||||||||||| ||||||||||||||||||||||||||||||||||||||||| ||| |||||| |||||||||||||||||| ||||||||    
T  27021319 ttcctcagaaatcaaccgaattgattattatatcagcatttttcttggacttcattataagttctccattgattctgtcgttgttctctatccgctgctt 27021220  T
Q  345 agcaatgtctggaggcttgccagtagagatatgcctcttcaaaactcgctgcattgctttatcaatatcaatatcaataaaccatttctcatcaaacaaa 444  Q
    |||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  27021219 agcaatgtctggaggcttgccaatagagatatgcctcttcaaaactcgctgcattgctttatcaatatcaatatcaataaaccatttctcatcaaacaaa 27021120  T
Q  445 gatgaaatctccttccatacccccattttccaagagcaaatagt 488  Q
    ||| |||| |||||||||| |||||| |||||||||||||||||    
T  27021119 gataaaatttccttccata-ccccatcttccaagagcaaatagt 27021077  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 111; E-Value: 8e-56
Query Start/End: Original strand, 1 - 115
Target Start/End: Original strand, 14152471 - 14152585
Alignment:
Q  1 cctgataacttcttcaatgtttcctttcttgtttttgacagcctcatgtagaatatcagcttcatgttttgccaaaattggattgatttcaacaccatca 100  Q
    |||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||    
T  14152471 cctgataacttcttcaatgtttcctttcttgtttttgacagcctcatgaagaatatcagcttcatgttttgccaaaattggattgatttcaacaccatca 14152570  T
Q  101 tatctaaatgagctc 115  Q
    |||||||||||||||    
T  14152571 tatctaaatgagctc 14152585  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 174 - 218
Target Start/End: Original strand, 14152644 - 14152688
Alignment:
Q  174 tagtacacgcatgaaatgacatatattacaggggtgagaaacact 218  Q
    ||||||||||| ||||||||||||||||||||||||| |||||||    
T  14152644 tagtacacgcaggaaatgacatatattacaggggtgaaaaacact 14152688  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 187 - 230
Target Start/End: Original strand, 10761174 - 10761217
Alignment:
Q  187 aaatgacatatattacaggggtgagaaacacttttaacactaaa 230  Q
    |||||||||||||||||||||||| ||||||| ||||| |||||    
T  10761174 aaatgacatatattacaggggtgaaaaacactattaaccctaaa 10761217  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 186 - 224
Target Start/End: Complemental strand, 17159151 - 17159113
Alignment:
Q  186 gaaatgacatatattacaggggtgagaaacacttttaac 224  Q
    ||||||||||||||||||||||||| ||||||| |||||    
T  17159151 gaaatgacatatattacaggggtgaaaaacactattaac 17159113  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 187 - 224
Target Start/End: Complemental strand, 116656 - 116619
Alignment:
Q  187 aaatgacatatattacaggggtgagaaacacttttaac 224  Q
    |||||||||||||||||||||||| ||||||| |||||    
T  116656 aaatgacatatattacaggggtgaaaaacactattaac 116619  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 187 - 224
Target Start/End: Original strand, 22981055 - 22981092
Alignment:
Q  187 aaatgacatatattacaggggtgagaaacacttttaac 224  Q
    |||||||||||||||||||||||| ||||||| |||||    
T  22981055 aaatgacatatattacaggggtgaaaaacactattaac 22981092  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 187 - 224
Target Start/End: Complemental strand, 28004679 - 28004642
Alignment:
Q  187 aaatgacatatattacaggggtgagaaacacttttaac 224  Q
    |||||||||||||||||||||||| ||||||| |||||    
T  28004679 aaatgacatatattacaggggtgaaaaacactattaac 28004642  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 187 - 224
Target Start/End: Complemental strand, 28061981 - 28061944
Alignment:
Q  187 aaatgacatatattacaggggtgagaaacacttttaac 224  Q
    |||||||||||||||||||||||| ||||||| |||||    
T  28061981 aaatgacatatattacaggggtgaaaaacactattaac 28061944  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 187 - 224
Target Start/End: Complemental strand, 36574473 - 36574436
Alignment:
Q  187 aaatgacatatattacaggggtgagaaacacttttaac 224  Q
    |||||||||||||||||||||||| ||||||| |||||    
T  36574473 aaatgacatatattacaggggtgaaaaacactgttaac 36574436  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 187 - 224
Target Start/End: Original strand, 40628420 - 40628457
Alignment:
Q  187 aaatgacatatattacaggggtgagaaacacttttaac 224  Q
    |||||||||||||||||||||||| ||||||| |||||    
T  40628420 aaatgacatatattacaggggtgaaaaacactattaac 40628457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 186 - 230
Target Start/End: Complemental strand, 1552776 - 1552732
Alignment:
Q  186 gaaatgacatatattacaggggtgagaaacacttttaacactaaa 230  Q
    |||||||| |||||||||||||||| ||||||| ||||| |||||    
T  1552776 gaaatgacctatattacaggggtgaaaaacactattaaccctaaa 1552732  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 186 - 230
Target Start/End: Complemental strand, 12610731 - 12610687
Alignment:
Q  186 gaaatgacatatattacaggggtgagaaacacttttaacactaaa 230  Q
    ||||||||||||||||| ||||||| ||||||| ||||| |||||    
T  12610731 gaaatgacatatattactggggtgaaaaacactattaaccctaaa 12610687  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 83; Significance: 4e-39; HSPs: 30)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 83; E-Value: 4e-39
Query Start/End: Original strand, 245 - 335
Target Start/End: Original strand, 38534857 - 38534947
Alignment:
Q  245 ttcctcataaatcaaccgacttgattattatatcagcatttttcttggacttcattataagctctgcattgagtctgtcgttgttctctat 335  Q
    ||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||    
T  38534857 ttcctcagaaatcaaccgacttgattattatatcagcatttttcttggacttcattataagttctgcattgagtctgtcgttgttctctat 38534947  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 364 - 427
Target Start/End: Original strand, 38535199 - 38535262
Alignment:
Q  364 ccagtagagatatgcctcttcaaaactcgctgcattgctttatcaatatcaatatcaataaacc 427  Q
    |||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||    
T  38535199 ccagtagagatatgcctcttcaaaactcgctgcattgctttatctatatcaatatcaataaacc 38535262  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 425 - 488
Target Start/End: Original strand, 38536209 - 38536271
Alignment:
Q  425 accatttctcatcaaacaaagatgaaatctccttccatacccccattttccaagagcaaatagt 488  Q
    ||||||||||||||||||||||||||| ||||||||||| |||||| |||||||||||||||||    
T  38536209 accatttctcatcaaacaaagatgaaacctccttccata-ccccatcttccaagagcaaatagt 38536271  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 186 - 230
Target Start/End: Complemental strand, 16274509 - 16274465
Alignment:
Q  186 gaaatgacatatattacaggggtgagaaacacttttaacactaaa 230  Q
    ||||||||||||||||||||||||| ||||||| ||||| |||||    
T  16274509 gaaatgacatatattacaggggtgaaaaacactattaaccctaaa 16274465  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 186 - 230
Target Start/End: Complemental strand, 31079150 - 31079106
Alignment:
Q  186 gaaatgacatatattacaggggtgagaaacacttttaacactaaa 230  Q
    ||||||||||||||||||||||||| ||||||| ||||| |||||    
T  31079150 gaaatgacatatattacaggggtgaaaaacactattaaccctaaa 31079106  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 186 - 230
Target Start/End: Complemental strand, 41745129 - 41745085
Alignment:
Q  186 gaaatgacatatattacaggggtgagaaacacttttaacactaaa 230  Q
    ||||||||||||||||||||||||| ||||||| ||||| |||||    
T  41745129 gaaatgacatatattacaggggtgaaaaacactattaaccctaaa 41745085  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 186 - 229
Target Start/End: Complemental strand, 43989084 - 43989041
Alignment:
Q  186 gaaatgacatatattacaggggtgagaaacacttttaacactaa 229  Q
    ||||||||||||||||||||||||| ||||||| ||||| ||||    
T  43989084 gaaatgacatatattacaggggtgaaaaacactattaaccctaa 43989041  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 186 - 224
Target Start/End: Original strand, 7881661 - 7881699
Alignment:
Q  186 gaaatgacatatattacaggggtgagaaacacttttaac 224  Q
    ||||||||||||||||||||||||| ||||||| |||||    
T  7881661 gaaatgacatatattacaggggtgaaaaacactattaac 7881699  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 187 - 229
Target Start/End: Complemental strand, 11666795 - 11666753
Alignment:
Q  187 aaatgacatatattacaggggtgagaaacacttttaacactaa 229  Q
    |||||||||||||||||||||||| ||||||| ||||| ||||    
T  11666795 aaatgacatatattacaggggtgaaaaacactattaaccctaa 11666753  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 186 - 224
Target Start/End: Complemental strand, 12179970 - 12179932
Alignment:
Q  186 gaaatgacatatattacaggggtgagaaacacttttaac 224  Q
    ||||||||||||||||||||||||| ||||||| |||||    
T  12179970 gaaatgacatatattacaggggtgaaaaacactattaac 12179932  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 186 - 224
Target Start/End: Original strand, 15093702 - 15093740
Alignment:
Q  186 gaaatgacatatattacaggggtgagaaacacttttaac 224  Q
    ||||||||||||||||||||||||| ||||||| |||||    
T  15093702 gaaatgacatatattacaggggtgaaaaacactattaac 15093740  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 186 - 224
Target Start/End: Original strand, 17358249 - 17358287
Alignment:
Q  186 gaaatgacatatattacaggggtgagaaacacttttaac 224  Q
    ||||||||||||||||||||||||| ||||||| |||||    
T  17358249 gaaatgacatatattacaggggtgaaaaacactattaac 17358287  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 186 - 224
Target Start/End: Original strand, 22947612 - 22947650
Alignment:
Q  186 gaaatgacatatattacaggggtgagaaacacttttaac 224  Q
    ||||||||||||||||||||||||| ||||||| |||||    
T  22947612 gaaatgacatatattacaggggtgaaaaacactattaac 22947650  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 186 - 224
Target Start/End: Complemental strand, 23774991 - 23774953
Alignment:
Q  186 gaaatgacatatattacaggggtgagaaacacttttaac 224  Q
    ||||||||||||||||||||||||| ||||||| |||||    
T  23774991 gaaatgacatatattacaggggtgaaaaacactattaac 23774953  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 186 - 224
Target Start/End: Original strand, 25728436 - 25728474
Alignment:
Q  186 gaaatgacatatattacaggggtgagaaacacttttaac 224  Q
    ||||||||||||||||||||||||| ||||||| |||||    
T  25728436 gaaatgacatatattacaggggtgaaaaacactattaac 25728474  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 186 - 224
Target Start/End: Complemental strand, 30165514 - 30165476
Alignment:
Q  186 gaaatgacatatattacaggggtgagaaacacttttaac 224  Q
    ||||||||||||||||||||||||| ||||||| |||||    
T  30165514 gaaatgacatatattacaggggtgaaaaacactattaac 30165476  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 186 - 224
Target Start/End: Original strand, 31079355 - 31079393
Alignment:
Q  186 gaaatgacatatattacaggggtgagaaacacttttaac 224  Q
    ||||||||||||||||||||||||| ||||||| |||||    
T  31079355 gaaatgacatatattacaggggtgaaaaacactattaac 31079393  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 186 - 224
Target Start/End: Original strand, 31298793 - 31298831
Alignment:
Q  186 gaaatgacatatattacaggggtgagaaacacttttaac 224  Q
    ||||||||||||||||||||||||| ||||||| |||||    
T  31298793 gaaatgacatatattacaggggtgaaaaacactattaac 31298831  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 186 - 224
Target Start/End: Complemental strand, 47668168 - 47668130
Alignment:
Q  186 gaaatgacatatattacaggggtgagaaacacttttaac 224  Q
    ||||||||||||||||||||||||| ||||||| |||||    
T  47668168 gaaatgacatatattacaggggtgaaaaacactattaac 47668130  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 187 - 224
Target Start/End: Complemental strand, 4098136 - 4098099
Alignment:
Q  187 aaatgacatatattacaggggtgagaaacacttttaac 224  Q
    |||||||||||||||||||||||| ||||||| |||||    
T  4098136 aaatgacatatattacaggggtgaaaaacactattaac 4098099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 186 - 223
Target Start/End: Original strand, 15984426 - 15984463
Alignment:
Q  186 gaaatgacatatattacaggggtgagaaacacttttaa 223  Q
    ||||||||||||||||||||||||| ||||||| ||||    
T  15984426 gaaatgacatatattacaggggtgaaaaacactattaa 15984463  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 186 - 223
Target Start/End: Original strand, 18318709 - 18318746
Alignment:
Q  186 gaaatgacatatattacaggggtgagaaacacttttaa 223  Q
    ||||||||||||||||||||||||| ||||||| ||||    
T  18318709 gaaatgacatatattacaggggtgaaaaacactattaa 18318746  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 187 - 224
Target Start/End: Original strand, 20033909 - 20033946
Alignment:
Q  187 aaatgacatatattacaggggtgagaaacacttttaac 224  Q
    |||||||||||||||||||||||| ||||||| |||||    
T  20033909 aaatgacatatattacaggggtgaaaaacactattaac 20033946  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 187 - 224
Target Start/End: Original strand, 23775138 - 23775175
Alignment:
Q  187 aaatgacatatattacaggggtgagaaacacttttaac 224  Q
    |||||||||||||||||||||||| ||||||| |||||    
T  23775138 aaatgacatatattacaggggtgaaaaacactattaac 23775175  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 187 - 224
Target Start/End: Original strand, 24919915 - 24919952
Alignment:
Q  187 aaatgacatatattacaggggtgagaaacacttttaac 224  Q
    |||||||||||||||||||||||| ||||||| |||||    
T  24919915 aaatgacatatattacaggggtgaaaaacactattaac 24919952  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 187 - 224
Target Start/End: Original strand, 37101557 - 37101594
Alignment:
Q  187 aaatgacatatattacaggggtgagaaacacttttaac 224  Q
    |||||||||||||||||||||||| ||||||| |||||    
T  37101557 aaatgacatatattacaggggtgaaaaacactattaac 37101594  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 187 - 224
Target Start/End: Complemental strand, 38651823 - 38651786
Alignment:
Q  187 aaatgacatatattacaggggtgagaaacacttttaac 224  Q
    |||||||||||||||||||||||| ||||||| |||||    
T  38651823 aaatgacatatattacaggggtgaaaaacactattaac 38651786  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 186 - 230
Target Start/End: Original strand, 11685281 - 11685325
Alignment:
Q  186 gaaatgacatatattacaggggtgagaaacacttttaacactaaa 230  Q
    |||||||| |||||||||||||||| ||||||| ||||| |||||    
T  11685281 gaaatgacctatattacaggggtgaaaaacactattaaccctaaa 11685325  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 337 - 365
Target Start/End: Original strand, 38535064 - 38535092
Alignment:
Q  337 cgctgcttagcaatgtctggaggcttgcc 365  Q
    |||||||||||||||||||||||||||||    
T  38535064 cgctgcttagcaatgtctggaggcttgcc 38535092  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 186 - 230
Target Start/End: Original strand, 48741828 - 48741872
Alignment:
Q  186 gaaatgacatatattacaggggtgagaaacacttttaacactaaa 230  Q
    ||||||||||||||||||||||||| || |||| ||||| |||||    
T  48741828 gaaatgacatatattacaggggtgaaaagcactattaaccctaaa 48741872  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0098 (Bit Score: 32; Significance: 0.00000001; HSPs: 1)
Name: scaffold0098
Description:

Target: scaffold0098; HSP #1
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 187 - 230
Target Start/End: Original strand, 4206 - 4249
Alignment:
Q  187 aaatgacatatattacaggggtgagaaacacttttaacactaaa 230  Q
    |||||||||||||||||||||||| ||||||| ||||| |||||    
T  4206 aaatgacatatattacaggggtgaaaaacactattaaccctaaa 4249  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 32; Significance: 0.00000001; HSPs: 18)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 187 - 230
Target Start/End: Original strand, 13006666 - 13006709
Alignment:
Q  187 aaatgacatatattacaggggtgagaaacacttttaacactaaa 230  Q
    |||||||||||||||||||||||| ||||||| ||||| |||||    
T  13006666 aaatgacatatattacaggggtgaaaaacactattaaccctaaa 13006709  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 187 - 230
Target Start/End: Original strand, 13078685 - 13078728
Alignment:
Q  187 aaatgacatatattacaggggtgagaaacacttttaacactaaa 230  Q
    |||||||||||||||||||||||| ||||||| ||||| |||||    
T  13078685 aaatgacatatattacaggggtgaaaaacactattaaccctaaa 13078728  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 186 - 229
Target Start/End: Complemental strand, 14435669 - 14435626
Alignment:
Q  186 gaaatgacatatattacaggggtgagaaacacttttaacactaa 229  Q
    ||||||||||||||||||||| ||| ||||||| ||||||||||    
T  14435669 gaaatgacatatattacagggatgaaaaacactattaacactaa 14435626  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 187 - 230
Target Start/End: Original strand, 22833647 - 22833690
Alignment:
Q  187 aaatgacatatattacaggggtgagaaacacttttaacactaaa 230  Q
    |||||||||||||||||||||||| ||||||| ||||| |||||    
T  22833647 aaatgacatatattacaggggtgaaaaacactattaaccctaaa 22833690  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 187 - 230
Target Start/End: Original strand, 29690711 - 29690754
Alignment:
Q  187 aaatgacatatattacaggggtgagaaacacttttaacactaaa 230  Q
    |||||||||||||||||||||||| ||||||| ||||| |||||    
T  29690711 aaatgacatatattacaggggtgaaaaacactattaaccctaaa 29690754  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 186 - 224
Target Start/End: Original strand, 10542294 - 10542332
Alignment:
Q  186 gaaatgacatatattacaggggtgagaaacacttttaac 224  Q
    ||||||||||||||||||||||||| ||||||| |||||    
T  10542294 gaaatgacatatattacaggggtgaaaaacactattaac 10542332  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 186 - 224
Target Start/End: Complemental strand, 13078495 - 13078457
Alignment:
Q  186 gaaatgacatatattacaggggtgagaaacacttttaac 224  Q
    ||||||||||||||||||||||||| ||||||| |||||    
T  13078495 gaaatgacatatattacaggggtgaaaaacactattaac 13078457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 186 - 224
Target Start/End: Complemental strand, 20884073 - 20884035
Alignment:
Q  186 gaaatgacatatattacaggggtgagaaacacttttaac 224  Q
    ||||||||||||||||||||||||| ||||||| |||||    
T  20884073 gaaatgacatatattacaggggtgaaaaacactattaac 20884035  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 186 - 224
Target Start/End: Original strand, 21262849 - 21262887
Alignment:
Q  186 gaaatgacatatattacaggggtgagaaacacttttaac 224  Q
    ||||||||||||||||||||||||| ||||||| |||||    
T  21262849 gaaatgacatatattacaggggtgaaaaacactattaac 21262887  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 186 - 224
Target Start/End: Complemental strand, 26006553 - 26006515
Alignment:
Q  186 gaaatgacatatattacaggggtgagaaacacttttaac 224  Q
    ||||||||||||||||||||||||| ||||||| |||||    
T  26006553 gaaatgacatatattacaggggtgaaaaacactattaac 26006515  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 186 - 224
Target Start/End: Original strand, 26524638 - 26524676
Alignment:
Q  186 gaaatgacatatattacaggggtgagaaacacttttaac 224  Q
    ||||||||||||||||||||||||| ||||||| |||||    
T  26524638 gaaatgacatatattacaggggtgaaaaacactattaac 26524676  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 187 - 229
Target Start/End: Complemental strand, 29989503 - 29989461
Alignment:
Q  187 aaatgacatatattacaggggtgagaaacacttttaacactaa 229  Q
    |||||||||||||||||||||||| ||||||| ||||| ||||    
T  29989503 aaatgacatatattacaggggtgaaaaacactattaaccctaa 29989461  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 187 - 224
Target Start/End: Complemental strand, 13003836 - 13003799
Alignment:
Q  187 aaatgacatatattacaggggtgagaaacacttttaac 224  Q
    |||||||||||||||||||||||| ||||||| |||||    
T  13003836 aaatgacatatattacaggggtgaaaaacactattaac 13003799  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 187 - 224
Target Start/End: Complemental strand, 16867799 - 16867762
Alignment:
Q  187 aaatgacatatattacaggggtgagaaacacttttaac 224  Q
    |||||||||||||||||||||||| ||||||| |||||    
T  16867799 aaatgacatatattacaggggtgaaaaacactattaac 16867762  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 187 - 224
Target Start/End: Original strand, 29989711 - 29989748
Alignment:
Q  187 aaatgacatatattacaggggtgagaaacacttttaac 224  Q
    |||||||||||||||||||||||| ||||||| |||||    
T  29989711 aaatgacatatattacaggggtgaaaaacactattaac 29989748  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 187 - 223
Target Start/End: Complemental strand, 5105141 - 5105105
Alignment:
Q  187 aaatgacatatattacaggggtgagaaacacttttaa 223  Q
    |||||||||||||||||||||||| ||||||| ||||    
T  5105141 aaatgacatatattacaggggtgaaaaacactattaa 5105105  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 186 - 230
Target Start/End: Complemental strand, 27829995 - 27829951
Alignment:
Q  186 gaaatgacatatattacaggggtgagaaacacttttaacactaaa 230  Q
    |||||| |||||||||||||||||| ||||||| ||||| |||||    
T  27829995 gaaatgtcatatattacaggggtgaaaaacactattaaccctaaa 27829951  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 186 - 230
Target Start/End: Complemental strand, 39987175 - 39987131
Alignment:
Q  186 gaaatgacatatattacaggggtgagaaacacttttaacactaaa 230  Q
    |||||||| |||||||||||||||| ||||||| ||||| |||||    
T  39987175 gaaatgacctatattacaggggtgaaaaacactattaaccctaaa 39987131  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 32; Significance: 0.00000001; HSPs: 23)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 185 - 224
Target Start/End: Original strand, 2077287 - 2077326
Alignment:
Q  185 tgaaatgacatatattacaggggtgagaaacacttttaac 224  Q
    |||||||||||||||||||||||||| ||||||| |||||    
T  2077287 tgaaatgacatatattacaggggtgaaaaacactattaac 2077326  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 186 - 229
Target Start/End: Original strand, 5529169 - 5529212
Alignment:
Q  186 gaaatgacatatattacaggggtgagaaacacttttaacactaa 229  Q
    ||||||||||||||||||||||||| ||||||| ||||| ||||    
T  5529169 gaaatgacatatattacaggggtgaaaaacactattaaccctaa 5529212  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 186 - 229
Target Start/End: Complemental strand, 8224429 - 8224386
Alignment:
Q  186 gaaatgacatatattacaggggtgagaaacacttttaacactaa 229  Q
    ||||||||||||||||||||||||| ||||||| ||||| ||||    
T  8224429 gaaatgacatatattacaggggtgaaaaacactattaaccctaa 8224386  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 187 - 230
Target Start/End: Original strand, 20962290 - 20962333
Alignment:
Q  187 aaatgacatatattacaggggtgagaaacacttttaacactaaa 230  Q
    |||||||||||||||||||||||| ||||||| ||||| |||||    
T  20962290 aaatgacatatattacaggggtgaaaaacactattaaccctaaa 20962333  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 186 - 224
Target Start/End: Complemental strand, 5513523 - 5513485
Alignment:
Q  186 gaaatgacatatattacaggggtgagaaacacttttaac 224  Q
    ||||||||||||||||||||||||| ||||||| |||||    
T  5513523 gaaatgacatatattacaggggtgaaaaacactattaac 5513485  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 186 - 224
Target Start/End: Complemental strand, 5863226 - 5863188
Alignment:
Q  186 gaaatgacatatattacaggggtgagaaacacttttaac 224  Q
    ||||||||||||||||||||||||| ||||||| |||||    
T  5863226 gaaatgacatatattacaggggtgaaaaacactattaac 5863188  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 186 - 224
Target Start/End: Complemental strand, 12883122 - 12883084
Alignment:
Q  186 gaaatgacatatattacaggggtgagaaacacttttaac 224  Q
    ||||||||||||||||||||||||| ||||||| |||||    
T  12883122 gaaatgacatatattacaggggtgaaaaacactattaac 12883084  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 186 - 224
Target Start/End: Original strand, 20101004 - 20101042
Alignment:
Q  186 gaaatgacatatattacaggggtgagaaacacttttaac 224  Q
    ||||||||||||||||||||||||| ||||||| |||||    
T  20101004 gaaatgacatatattacaggggtgaaaaacactattaac 20101042  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 186 - 224
Target Start/End: Complemental strand, 20962084 - 20962046
Alignment:
Q  186 gaaatgacatatattacaggggtgagaaacacttttaac 224  Q
    ||||||||||||||||||||||||| ||||||| |||||    
T  20962084 gaaatgacatatattacaggggtgaaaaacactattaac 20962046  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 186 - 224
Target Start/End: Complemental strand, 22265175 - 22265137
Alignment:
Q  186 gaaatgacatatattacaggggtgagaaacacttttaac 224  Q
    ||||||||||||||||||||||||| ||||||| |||||    
T  22265175 gaaatgacatatattacaggggtgaaaaacactattaac 22265137  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 186 - 224
Target Start/End: Original strand, 24388849 - 24388887
Alignment:
Q  186 gaaatgacatatattacaggggtgagaaacacttttaac 224  Q
    ||||||||||||||||||||||||| ||||||| |||||    
T  24388849 gaaatgacatatattacaggggtgaaaaacactattaac 24388887  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 187 - 229
Target Start/End: Complemental strand, 27926972 - 27926930
Alignment:
Q  187 aaatgacatatattacaggggtgagaaacacttttaacactaa 229  Q
    |||||||||||||||||||||||| ||||||| ||||| ||||    
T  27926972 aaatgacatatattacaggggtgaaaaacactattaaccctaa 27926930  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 186 - 224
Target Start/End: Complemental strand, 33010838 - 33010800
Alignment:
Q  186 gaaatgacatatattacaggggtgagaaacacttttaac 224  Q
    ||||||||||||||||||||||||| ||||||| |||||    
T  33010838 gaaatgacatatattacaggggtgaaaaacactattaac 33010800  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 186 - 224
Target Start/End: Original strand, 39257376 - 39257414
Alignment:
Q  186 gaaatgacatatattacaggggtgagaaacacttttaac 224  Q
    ||||||||||||||||||||||||| ||||||| |||||    
T  39257376 gaaatgacatatattacaggggtgaaaaacactcttaac 39257414  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 186 - 224
Target Start/End: Complemental strand, 44353942 - 44353904
Alignment:
Q  186 gaaatgacatatattacaggggtgagaaacacttttaac 224  Q
    ||||||||||||||||||||||||| ||||||| |||||    
T  44353942 gaaatgacatatattacaggggtgaaaaacactattaac 44353904  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 187 - 224
Target Start/End: Complemental strand, 2077083 - 2077046
Alignment:
Q  187 aaatgacatatattacaggggtgagaaacacttttaac 224  Q
    |||||||||||||||||||||||| ||||||| |||||    
T  2077083 aaatgacatatattacaggggtgaaaaacactattaac 2077046  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 190 - 235
Target Start/End: Original strand, 5513732 - 5513777
Alignment:
Q  190 tgacatatattacaggggtgagaaacacttttaacactaaagttat 235  Q
    ||||||||||||||||||||| ||||||| ||||| ||||| ||||    
T  5513732 tgacatatattacaggggtgaaaaacactattaaccctaaatttat 5513777  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 187 - 224
Target Start/End: Original strand, 23081040 - 23081077
Alignment:
Q  187 aaatgacatatattacaggggtgagaaacacttttaac 224  Q
    |||||||||||||||||||||||| ||||||| |||||    
T  23081040 aaatgacatatattacaggggtgaaaaacactattaac 23081077  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 187 - 224
Target Start/End: Original strand, 34963599 - 34963636
Alignment:
Q  187 aaatgacatatattacaggggtgagaaacacttttaac 224  Q
    |||||||||||||||||||||||| ||||||| |||||    
T  34963599 aaatgacatatattacaggggtgaaaaacactattaac 34963636  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 187 - 224
Target Start/End: Complemental strand, 36202159 - 36202122
Alignment:
Q  187 aaatgacatatattacaggggtgagaaacacttttaac 224  Q
    |||||||||||||||||||||||| ||||||| |||||    
T  36202159 aaatgacatatattacaggggtgaaaaacactattaac 36202122  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 186 - 230
Target Start/End: Original strand, 8224633 - 8224677
Alignment:
Q  186 gaaatgacatatattacaggggtgagaaacacttttaacactaaa 230  Q
    |||||| |||||||||||||||||| ||||||| ||||| |||||    
T  8224633 gaaatggcatatattacaggggtgaaaaacactattaaccctaaa 8224677  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 186 - 218
Target Start/End: Complemental strand, 8972704 - 8972672
Alignment:
Q  186 gaaatgacatatattacaggggtgagaaacact 218  Q
    ||||||||||||||||||||||||| |||||||    
T  8972704 gaaatgacatatattacaggggtgaaaaacact 8972672  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 187 - 223
Target Start/End: Complemental strand, 20891659 - 20891623
Alignment:
Q  187 aaatgacatatattacaggggtgagaaacacttttaa 223  Q
    |||||||||||||||||||||||| ||||||| ||||    
T  20891659 aaatgacatatattacaggggtgaaaaacactattaa 20891623  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 32; Significance: 0.00000001; HSPs: 13)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 186 - 229
Target Start/End: Original strand, 11586474 - 11586517
Alignment:
Q  186 gaaatgacatatattacaggggtgagaaacacttttaacactaa 229  Q
    ||||||||||||||||||||||||| ||||||| ||||| ||||    
T  11586474 gaaatgacatatattacaggggtgaaaaacactattaaccctaa 11586517  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 186 - 224
Target Start/End: Original strand, 163350 - 163388
Alignment:
Q  186 gaaatgacatatattacaggggtgagaaacacttttaac 224  Q
    ||||||||||||||||||||||||| ||||||| |||||    
T  163350 gaaatgacatatattacaggggtgaaaaacactattaac 163388  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 186 - 224
Target Start/End: Original strand, 1613838 - 1613876
Alignment:
Q  186 gaaatgacatatattacaggggtgagaaacacttttaac 224  Q
    ||||||||||||||||||||||||| ||||||| |||||    
T  1613838 gaaatgacatatattacaggggtgaaaaacactattaac 1613876  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 186 - 224
Target Start/End: Complemental strand, 6953920 - 6953882
Alignment:
Q  186 gaaatgacatatattacaggggtgagaaacacttttaac 224  Q
    ||||||||||||||||||||||||| ||||||| |||||    
T  6953920 gaaatgacatatattacaggggtgaaaaacactattaac 6953882  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 186 - 224
Target Start/End: Original strand, 12886998 - 12887036
Alignment:
Q  186 gaaatgacatatattacaggggtgagaaacacttttaac 224  Q
    ||||||||||||||||||||||||| ||||||| |||||    
T  12886998 gaaatgacatatattacaggggtgaaaaacactattaac 12887036  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 186 - 224
Target Start/End: Complemental strand, 22374602 - 22374564
Alignment:
Q  186 gaaatgacatatattacaggggtgagaaacacttttaac 224  Q
    ||||||||||||||||||||||||| ||||||| |||||    
T  22374602 gaaatgacatatattacaggggtgaaaaacactattaac 22374564  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 186 - 224
Target Start/End: Original strand, 45323432 - 45323470
Alignment:
Q  186 gaaatgacatatattacaggggtgagaaacacttttaac 224  Q
    ||||||||||||||||||||||||| ||||||| |||||    
T  45323432 gaaatgacatatattacaggggtgaaaaacactattaac 45323470  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 186 - 235
Target Start/End: Original strand, 1819328 - 1819377
Alignment:
Q  186 gaaatgacatatattacaggggtgagaaacacttttaacactaaagttat 235  Q
    ||||||||||||||||||| ||||| ||||||| ||||| ||||| ||||    
T  1819328 gaaatgacatatattacagaggtgaaaaacactattaaccctaaatttat 1819377  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 187 - 224
Target Start/End: Complemental strand, 15734513 - 15734476
Alignment:
Q  187 aaatgacatatattacaggggtgagaaacacttttaac 224  Q
    |||||||||||||||||||||||| ||||||| |||||    
T  15734513 aaatgacatatattacaggggtgaaaaacactattaac 15734476  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 187 - 224
Target Start/End: Complemental strand, 51238001 - 51237964
Alignment:
Q  187 aaatgacatatattacaggggtgagaaacacttttaac 224  Q
    |||||||||||||||||||||||| ||||||| |||||    
T  51238001 aaatgacatatattacaggggtgaaaaacactattaac 51237964  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 186 - 230
Target Start/End: Original strand, 9403566 - 9403610
Alignment:
Q  186 gaaatgacatatattacaggggtgagaaacacttttaacactaaa 230  Q
    ||||||||||||||||||||||||| || |||| ||||| |||||    
T  9403566 gaaatgacatatattacaggggtgaaaagcactattaaccctaaa 9403610  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 187 - 223
Target Start/End: Complemental strand, 24169146 - 24169110
Alignment:
Q  187 aaatgacatatattacaggggtgagaaacacttttaa 223  Q
    |||||||||||||||||||||||| ||||||| ||||    
T  24169146 aaatgacatatattacaggggtgaaaaacactattaa 24169110  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 187 - 223
Target Start/End: Original strand, 28362622 - 28362658
Alignment:
Q  187 aaatgacatatattacaggggtgagaaacacttttaa 223  Q
    |||||||||||||||||||||||| ||||||| ||||    
T  28362622 aaatgacatatattacaggggtgaaaaacactattaa 28362658  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0744 (Bit Score: 31; Significance: 0.00000004; HSPs: 1)
Name: scaffold0744
Description:

Target: scaffold0744; HSP #1
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 186 - 224
Target Start/End: Original strand, 1516 - 1554
Alignment:
Q  186 gaaatgacatatattacaggggtgagaaacacttttaac 224  Q
    ||||||||||||||||||||||||| ||||||| |||||    
T  1516 gaaatgacatatattacaggggtgaaaaacactattaac 1554  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0235 (Bit Score: 31; Significance: 0.00000004; HSPs: 1)
Name: scaffold0235
Description:

Target: scaffold0235; HSP #1
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 186 - 224
Target Start/End: Complemental strand, 24231 - 24193
Alignment:
Q  186 gaaatgacatatattacaggggtgagaaacacttttaac 224  Q
    ||||||||||||||||||||||||| ||||||| |||||    
T  24231 gaaatgacatatattacaggggtgaaaaacactattaac 24193  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0037 (Bit Score: 31; Significance: 0.00000004; HSPs: 1)
Name: scaffold0037
Description:

Target: scaffold0037; HSP #1
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 186 - 224
Target Start/End: Original strand, 96689 - 96727
Alignment:
Q  186 gaaatgacatatattacaggggtgagaaacacttttaac 224  Q
    ||||||||||||||||||||||||| ||||||| |||||    
T  96689 gaaatgacatatattacaggggtgaaaaacactattaac 96727  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0023 (Bit Score: 31; Significance: 0.00000004; HSPs: 1)
Name: scaffold0023
Description:

Target: scaffold0023; HSP #1
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 186 - 224
Target Start/End: Original strand, 125560 - 125598
Alignment:
Q  186 gaaatgacatatattacaggggtgagaaacacttttaac 224  Q
    ||||||||||||||||||||||||| ||||||| |||||    
T  125560 gaaatgacatatattacaggggtgaaaaacactattaac 125598  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0009 (Bit Score: 31; Significance: 0.00000004; HSPs: 2)
Name: scaffold0009
Description:

Target: scaffold0009; HSP #1
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 186 - 224
Target Start/End: Original strand, 25010 - 25048
Alignment:
Q  186 gaaatgacatatattacaggggtgagaaacacttttaac 224  Q
    ||||||||||||||||||||||||| ||||||| |||||    
T  25010 gaaatgacatatattacaggggtgaaaaacactattaac 25048  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0009; HSP #2
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 186 - 223
Target Start/End: Complemental strand, 24803 - 24766
Alignment:
Q  186 gaaatgacatatattacaggggtgagaaacacttttaa 223  Q
    ||||||||||||||||||||||||| ||||||| ||||    
T  24803 gaaatgacatatattacaggggtgaaaaacactattaa 24766  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 31; Significance: 0.00000004; HSPs: 20)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 187 - 229
Target Start/End: Original strand, 2965818 - 2965860
Alignment:
Q  187 aaatgacatatattacaggggtgagaaacacttttaacactaa 229  Q
    |||||||||||||||||||||||| ||||||| ||||| ||||    
T  2965818 aaatgacatatattacaggggtgaaaaacactattaaccctaa 2965860  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 186 - 224
Target Start/End: Complemental strand, 4407908 - 4407870
Alignment:
Q  186 gaaatgacatatattacaggggtgagaaacacttttaac 224  Q
    ||||||||||||||||||||||||| ||||||| |||||    
T  4407908 gaaatgacatatattacaggggtgaaaaacactattaac 4407870  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 186 - 224
Target Start/End: Complemental strand, 9964393 - 9964355
Alignment:
Q  186 gaaatgacatatattacaggggtgagaaacacttttaac 224  Q
    ||||||||||||||||||||||||| ||||||| |||||    
T  9964393 gaaatgacatatattacaggggtgaaaaacactattaac 9964355  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 186 - 224
Target Start/End: Original strand, 14597338 - 14597376
Alignment:
Q  186 gaaatgacatatattacaggggtgagaaacacttttaac 224  Q
    ||||||||||||||||||||||||| ||||||| |||||    
T  14597338 gaaatgacatatattacaggggtgaaaaacactattaac 14597376  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 186 - 224
Target Start/End: Complemental strand, 15502567 - 15502529
Alignment:
Q  186 gaaatgacatatattacaggggtgagaaacacttttaac 224  Q
    ||||||||||||||||||||||||| ||||||| |||||    
T  15502567 gaaatgacatatattacaggggtgaaaaacactattaac 15502529  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 186 - 224
Target Start/End: Original strand, 15502773 - 15502811
Alignment:
Q  186 gaaatgacatatattacaggggtgagaaacacttttaac 224  Q
    ||||||||||||||||||||||||| ||||||| |||||    
T  15502773 gaaatgacatatattacaggggtgaaaaacactattaac 15502811  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 186 - 224
Target Start/End: Original strand, 21383967 - 21384005
Alignment:
Q  186 gaaatgacatatattacaggggtgagaaacacttttaac 224  Q
    ||||||||||||||||||||||||| ||||||| |||||    
T  21383967 gaaatgacatatattacaggggtgaaaaacactattaac 21384005  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 186 - 224
Target Start/End: Complemental strand, 22043563 - 22043525
Alignment:
Q  186 gaaatgacatatattacaggggtgagaaacacttttaac 224  Q
    ||||||||||||||||||||||||| ||||||| |||||    
T  22043563 gaaatgacatatattacaggggtgaaaaacactattaac 22043525  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 186 - 224
Target Start/End: Complemental strand, 27660414 - 27660376
Alignment:
Q  186 gaaatgacatatattacaggggtgagaaacacttttaac 224  Q
    ||||||||||||||||||||||||| ||||||| |||||    
T  27660414 gaaatgacatatattacaggggtgaaaaacactattaac 27660376  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 186 - 224
Target Start/End: Original strand, 28039139 - 28039177
Alignment:
Q  186 gaaatgacatatattacaggggtgagaaacacttttaac 224  Q
    ||||||||||||||||||||||||| ||||||| |||||    
T  28039139 gaaatgacatatattacaggggtgaaaaacactattaac 28039177  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 187 - 224
Target Start/End: Complemental strand, 6176731 - 6176694
Alignment:
Q  187 aaatgacatatattacaggggtgagaaacacttttaac 224  Q
    |||||||||||||||||||||||| ||||||| |||||    
T  6176731 aaatgacatatattacaggggtgaaaaacactattaac 6176694  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 187 - 224
Target Start/End: Original strand, 6176938 - 6176975
Alignment:
Q  187 aaatgacatatattacaggggtgagaaacacttttaac 224  Q
    |||||||||||||||||||||||| ||||||| |||||    
T  6176938 aaatgacatatattacaggggtgaaaaacactattaac 6176975  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 187 - 224
Target Start/End: Complemental strand, 13788080 - 13788043
Alignment:
Q  187 aaatgacatatattacaggggtgagaaacacttttaac 224  Q
    |||||||||||||||||||||||| ||||||| |||||    
T  13788080 aaatgacatatattacaggggtgaaaaacactattaac 13788043  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 187 - 224
Target Start/End: Complemental strand, 13796699 - 13796662
Alignment:
Q  187 aaatgacatatattacaggggtgagaaacacttttaac 224  Q
    |||||||||||||||||||||||| ||||||| |||||    
T  13796699 aaatgacatatattacaggggtgaaaaacactattaac 13796662  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 187 - 224
Target Start/End: Original strand, 18699245 - 18699282
Alignment:
Q  187 aaatgacatatattacaggggtgagaaacacttttaac 224  Q
    |||||||||||||||||||||||| ||||||| |||||    
T  18699245 aaatgacatatattacaggggtgaaaaacactattaac 18699282  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 187 - 224
Target Start/End: Original strand, 19591546 - 19591583
Alignment:
Q  187 aaatgacatatattacaggggtgagaaacacttttaac 224  Q
    |||||||||||||||||||||||| ||||||| |||||    
T  19591546 aaatgacatatattacaggggtgaaaaacactattaac 19591583  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 187 - 224
Target Start/End: Original strand, 28632013 - 28632050
Alignment:
Q  187 aaatgacatatattacaggggtgagaaacacttttaac 224  Q
    |||||||||||||||||||||||| ||||||| |||||    
T  28632013 aaatgacatatattacaggggtgaaaaacactattaac 28632050  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 186 - 230
Target Start/End: Complemental strand, 9887693 - 9887649
Alignment:
Q  186 gaaatgacatatattacaggggtgagaaacacttttaacactaaa 230  Q
    ||||||||||||||||| ||||||| ||||||| ||||| |||||    
T  9887693 gaaatgacatatattactggggtgaaaaacactattaaccctaaa 9887649  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 186 - 230
Target Start/End: Complemental strand, 16840337 - 16840293
Alignment:
Q  186 gaaatgacatatattacaggggtgagaaacacttttaacactaaa 230  Q
    |||||||| |||||||||||||||| ||||||| ||||| |||||    
T  16840337 gaaatgacctatattacaggggtgaaaaacactattaaccctaaa 16840293  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 186 - 230
Target Start/End: Complemental strand, 25948670 - 25948626
Alignment:
Q  186 gaaatgacatatattacaggggtgagaaacacttttaacactaaa 230  Q
    |||||||||||||||||| |||||| ||||||| ||||| |||||    
T  25948670 gaaatgacatatattacaagggtgaaaaacactattaaccctaaa 25948626  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 31; Significance: 0.00000004; HSPs: 18)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 186 - 224
Target Start/End: Original strand, 3526784 - 3526822
Alignment:
Q  186 gaaatgacatatattacaggggtgagaaacacttttaac 224  Q
    ||||||||||||||||||||||||| ||||||| |||||    
T  3526784 gaaatgacatatattacaggggtgaaaaacactattaac 3526822  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 186 - 224
Target Start/End: Original strand, 6019643 - 6019681
Alignment:
Q  186 gaaatgacatatattacaggggtgagaaacacttttaac 224  Q
    ||||||||||||||||||||||||| ||||||| |||||    
T  6019643 gaaatgacatatattacaggggtgaaaaacactattaac 6019681  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 186 - 224
Target Start/End: Complemental strand, 7014769 - 7014731
Alignment:
Q  186 gaaatgacatatattacaggggtgagaaacacttttaac 224  Q
    ||||||||||||||||||||||||| ||||||| |||||    
T  7014769 gaaatgacatatattacaggggtgaaaaacactattaac 7014731  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 186 - 224
Target Start/End: Complemental strand, 8763939 - 8763901
Alignment:
Q  186 gaaatgacatatattacaggggtgagaaacacttttaac 224  Q
    ||||||||||||||||||||||||| ||||||| |||||    
T  8763939 gaaatgacatatattacaggggtgaaaaacactattaac 8763901  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 186 - 224
Target Start/End: Complemental strand, 9268613 - 9268575
Alignment:
Q  186 gaaatgacatatattacaggggtgagaaacacttttaac 224  Q
    ||||||||||||||||||||||||| ||||||| |||||    
T  9268613 gaaatgacatatattacaggggtgaaaaacactattaac 9268575  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 186 - 224
Target Start/End: Original strand, 9268818 - 9268856
Alignment:
Q  186 gaaatgacatatattacaggggtgagaaacacttttaac 224  Q
    ||||||||||||||||||||||||| ||||||| |||||    
T  9268818 gaaatgacatatattacaggggtgaaaaacactattaac 9268856  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 186 - 224
Target Start/End: Original strand, 33312580 - 33312618
Alignment:
Q  186 gaaatgacatatattacaggggtgagaaacacttttaac 224  Q
    ||||||||||||||||||||||||| ||||||| |||||    
T  33312580 gaaatgacatatattacaggggtgaaaaacactattaac 33312618  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 187 - 224
Target Start/End: Original strand, 5047413 - 5047450
Alignment:
Q  187 aaatgacatatattacaggggtgagaaacacttttaac 224  Q
    |||||||||||||||||||||||| ||||||| |||||    
T  5047413 aaatgacatatattacaggggtgaaaaacactattaac 5047450  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 187 - 224
Target Start/End: Complemental strand, 5154760 - 5154723
Alignment:
Q  187 aaatgacatatattacaggggtgagaaacacttttaac 224  Q
    |||||||||||||||||||||||| ||||||| |||||    
T  5154760 aaatgacatatattacaggggtgaaaaacactattaac 5154723  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 187 - 224
Target Start/End: Original strand, 7014974 - 7015011
Alignment:
Q  187 aaatgacatatattacaggggtgagaaacacttttaac 224  Q
    |||||||||||||||||||||||| ||||||| |||||    
T  7014974 aaatgacatatattacaggggtgaaaaacactattaac 7015011  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 187 - 224
Target Start/End: Complemental strand, 7731309 - 7731272
Alignment:
Q  187 aaatgacatatattacaggggtgagaaacacttttaac 224  Q
    |||||||||||||||||||||||| ||||||| |||||    
T  7731309 aaatgacatatattacaggggtgaaaaacactattaac 7731272  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 187 - 224
Target Start/End: Complemental strand, 10265529 - 10265492
Alignment:
Q  187 aaatgacatatattacaggggtgagaaacacttttaac 224  Q
    |||||||||||||||||||||||| ||||||| |||||    
T  10265529 aaatgacatatattacaggggtgaaaaacactattaac 10265492  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 187 - 224
Target Start/End: Complemental strand, 25484155 - 25484118
Alignment:
Q  187 aaatgacatatattacaggggtgagaaacacttttaac 224  Q
    |||||||||||||||||||||||| ||||||| |||||    
T  25484155 aaatgacatatattacaggggtgaaaaacactattaac 25484118  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 187 - 224
Target Start/End: Complemental strand, 37585675 - 37585638
Alignment:
Q  187 aaatgacatatattacaggggtgagaaacacttttaac 224  Q
    |||||||||||||||||||||||| ||||||| |||||    
T  37585675 aaatgacatatattacaggggtgaaaaacactattaac 37585638  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 187 - 224
Target Start/End: Original strand, 40004121 - 40004158
Alignment:
Q  187 aaatgacatatattacaggggtgagaaacacttttaac 224  Q
    |||||||||||||||||||||||| ||||||| |||||    
T  40004121 aaatgacatatattacaggggtgaaaaacactattaac 40004158  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 187 - 224
Target Start/End: Complemental strand, 54014596 - 54014559
Alignment:
Q  187 aaatgacatatattacaggggtgagaaacacttttaac 224  Q
    |||||||||||||||||||||||| ||||||| |||||    
T  54014596 aaatgacatatattacaggggtgaaaaacactattaac 54014559  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 186 - 230
Target Start/End: Complemental strand, 16343676 - 16343632
Alignment:
Q  186 gaaatgacatatattacaggggtgagaaacacttttaacactaaa 230  Q
    ||||||||||||||||||||||| | ||||||| ||||| |||||    
T  16343676 gaaatgacatatattacaggggttaaaaacactattaaccctaaa 16343632  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 186 - 230
Target Start/End: Complemental strand, 19271659 - 19271615
Alignment:
Q  186 gaaatgacatatattacaggggtgagaaacacttttaacactaaa 230  Q
    ||||||| ||||||||||||||||| ||||||| ||||| |||||    
T  19271659 gaaatgaaatatattacaggggtgaaaaacactattaaccctaaa 19271615  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0420 (Bit Score: 30; Significance: 0.0000002; HSPs: 1)
Name: scaffold0420
Description:

Target: scaffold0420; HSP #1
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 187 - 224
Target Start/End: Original strand, 4491 - 4528
Alignment:
Q  187 aaatgacatatattacaggggtgagaaacacttttaac 224  Q
    |||||||||||||||||||||||| ||||||| |||||    
T  4491 aaatgacatatattacaggggtgaaaaacactattaac 4528  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0734 (Bit Score: 29; Significance: 0.0000007; HSPs: 1)
Name: scaffold0734
Description:

Target: scaffold0734; HSP #1
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 186 - 218
Target Start/End: Complemental strand, 3011 - 2979
Alignment:
Q  186 gaaatgacatatattacaggggtgagaaacact 218  Q
    ||||||||||||||||||||||||| |||||||    
T  3011 gaaatgacatatattacaggggtgaaaaacact 2979  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0284 (Bit Score: 29; Significance: 0.0000007; HSPs: 1)
Name: scaffold0284
Description:

Target: scaffold0284; HSP #1
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 187 - 223
Target Start/End: Complemental strand, 3402 - 3366
Alignment:
Q  187 aaatgacatatattacaggggtgagaaacacttttaa 223  Q
    |||||||||||||||||||||||| ||||||| ||||    
T  3402 aaatgacatatattacaggggtgaaaaacactattaa 3366  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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