View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF10178_low_28 (Length: 235)

Name: NF10178_low_28
Description: NF10178
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF10178_low_28
NF10178_low_28
[»] scaffold0117 (3 HSPs)
scaffold0117 (3-235)||(21430-21662)
scaffold0117 (3-78)||(34270-34345)
scaffold0117 (185-235)||(42362-42412)
[»] scaffold0216 (1 HSPs)
scaffold0216 (3-235)||(21924-22156)
[»] chr1 (48 HSPs)
chr1 (3-232)||(29535663-29535892)
chr1 (3-235)||(13227472-13227704)
chr1 (124-235)||(21180597-21180708)
chr1 (3-78)||(24960626-24960701)
chr1 (3-74)||(21180515-21180586)
chr1 (155-234)||(21189971-21190050)
chr1 (86-150)||(24960492-24960556)
chr1 (168-234)||(35893598-35893664)
chr1 (186-235)||(297024-297073)
chr1 (186-235)||(16058648-16058697)
chr1 (185-234)||(28313018-28313067)
chr1 (185-233)||(2332543-2332591)
chr1 (187-235)||(14792897-14792945)
chr1 (186-234)||(44892117-44892165)
chr1 (185-232)||(50001146-50001193)
chr1 (186-232)||(13989477-13989523)
chr1 (186-232)||(21046383-21046429)
chr1 (186-232)||(21474591-21474637)
chr1 (185-235)||(38056984-38057034)
chr1 (185-235)||(45496615-45496665)
chr1 (185-235)||(45574385-45574435)
chr1 (186-235)||(1643262-1643311)
chr1 (190-235)||(4596183-4596228)
chr1 (190-235)||(19676380-19676425)
chr1 (186-235)||(20633968-20634017)
chr1 (186-235)||(41225789-41225838)
chr1 (186-235)||(41227042-41227091)
chr1 (185-233)||(6833885-6833933)
chr1 (187-235)||(18121273-18121321)
chr1 (187-235)||(38887422-38887470)
chr1 (196-235)||(12710557-12710596)
chr1 (185-235)||(8276325-8276375)
chr1 (185-235)||(22130398-22130448)
chr1 (186-232)||(51082888-51082934)
chr1 (190-235)||(17902100-17902145)
chr1 (186-235)||(20588348-20588396)
chr1 (186-235)||(20592886-20592934)
chr1 (155-232)||(21244330-21244407)
chr1 (186-235)||(42912719-42912768)
chr1 (190-235)||(50544520-50544565)
chr1 (190-234)||(16372421-16372465)
chr1 (187-230)||(21841380-21841423)
chr1 (187-230)||(21922797-21922840)
chr1 (196-235)||(46198069-46198108)
chr1 (186-232)||(14237946-14237992)
chr1 (185-235)||(23194884-23194934)
chr1 (186-227)||(16362535-16362576)
chr1 (190-235)||(24720032-24720077)
[»] scaffold0672 (1 HSPs)
scaffold0672 (3-233)||(7707-7937)
[»] chr4 (60 HSPs)
chr4 (3-235)||(14049186-14049419)
chr4 (3-235)||(30147524-30147756)
chr4 (3-135)||(14035415-14035558)
chr4 (154-234)||(10273024-10273104)
chr4 (186-235)||(33849411-33849460)
chr4 (154-235)||(55582860-55582940)
chr4 (168-235)||(9621859-9621926)
chr4 (155-226)||(14477017-14477088)
chr4 (186-235)||(2424955-2425004)
chr4 (186-235)||(15011847-15011896)
chr4 (186-235)||(25091322-25091371)
chr4 (186-235)||(46740867-46740916)
chr4 (187-235)||(16998194-16998242)
chr4 (186-233)||(44023938-44023985)
chr4 (186-232)||(15117857-15117903)
chr4 (186-232)||(18239117-18239163)
chr4 (186-232)||(44772588-44772634)
chr4 (190-235)||(12424632-12424677)
chr4 (186-235)||(14630495-14630544)
chr4 (185-234)||(15008636-15008685)
chr4 (186-235)||(16026263-16026312)
chr4 (190-235)||(28385912-28385957)
chr4 (190-235)||(49547282-49547327)
chr4 (188-233)||(53630809-53630854)
chr4 (188-232)||(1837026-1837070)
chr4 (187-235)||(26445553-26445601)
chr4 (195-235)||(35660515-35660555)
chr4 (186-234)||(36038480-36038528)
chr4 (195-235)||(37019338-37019378)
chr4 (195-235)||(42875467-42875507)
chr4 (188-235)||(10356772-10356819)
chr4 (188-235)||(11425614-11425661)
chr4 (186-233)||(19609995-19610042)
chr4 (187-230)||(50221845-50221888)
chr4 (185-235)||(630236-630286)
chr4 (186-232)||(7640691-7640737)
chr4 (185-235)||(9638676-9638726)
chr4 (185-235)||(10694580-10694630)
chr4 (185-235)||(10908346-10908396)
chr4 (186-235)||(12622981-12623030)
chr4 (186-235)||(15114891-15114940)
chr4 (190-235)||(16731779-16731824)
chr4 (186-234)||(15534791-15534839)
chr4 (185-233)||(24046867-24046915)
chr4 (190-234)||(47357287-47357331)
chr4 (200-235)||(19435045-19435080)
chr4 (190-232)||(3485580-3485622)
chr4 (185-235)||(14549295-14549345)
chr4 (185-235)||(14995747-14995797)
chr4 (196-234)||(18213236-18213274)
chr4 (185-235)||(19697929-19697979)
chr4 (185-235)||(19708514-19708564)
chr4 (185-235)||(40620199-40620249)
chr4 (185-234)||(18247843-18247892)
chr4 (190-235)||(33243634-33243679)
chr4 (186-230)||(9923870-9923914)
chr4 (187-235)||(19081676-19081724)
chr4 (188-232)||(19566255-19566299)
chr4 (186-230)||(33186575-33186619)
chr4 (185-233)||(56115169-56115217)
[»] scaffold0064 (2 HSPs)
scaffold0064 (3-232)||(68573-68802)
scaffold0064 (186-235)||(58417-58466)
[»] chr5 (57 HSPs)
chr5 (3-235)||(6766330-6766573)
chr5 (3-233)||(17813067-17813297)
chr5 (3-78)||(24276735-24276810)
chr5 (154-233)||(24276908-24276987)
chr5 (154-233)||(24385226-24385305)
chr5 (3-78)||(24385403-24385478)
chr5 (162-234)||(20312624-20312696)
chr5 (172-235)||(16604924-16604987)
chr5 (185-235)||(17011395-17011445)
chr5 (185-235)||(29448507-29448557)
chr5 (185-235)||(36509117-36509167)
chr5 (186-235)||(8833541-8833590)
chr5 (186-235)||(18744318-18744367)
chr5 (186-235)||(26749700-26749749)
chr5 (187-235)||(41875928-41875976)
chr5 (186-232)||(264273-264319)
chr5 (185-235)||(1627714-1627764)
chr5 (186-232)||(20909623-20909669)
chr5 (185-235)||(22758223-22758273)
chr5 (186-232)||(29346591-29346637)
chr5 (186-232)||(29349064-29349110)
chr5 (186-232)||(29351537-29351583)
chr5 (185-235)||(33472897-33472947)
chr5 (186-232)||(39363995-39364041)
chr5 (185-235)||(43242991-43243041)
chr5 (186-235)||(8504203-8504252)
chr5 (186-235)||(26762070-26762119)
chr5 (183-235)||(32607656-32607708)
chr5 (188-232)||(38620047-38620091)
chr5 (185-234)||(263527-263577)
chr5 (195-233)||(21554722-21554760)
chr5 (186-232)||(39245747-39245793)
chr5 (186-235)||(14026142-14026191)
chr5 (186-235)||(27868909-27868958)
chr5 (190-235)||(42961046-42961091)
chr5 (190-234)||(12007-12051)
chr5 (185-233)||(18419083-18419131)
chr5 (190-234)||(18778567-18778611)
chr5 (190-234)||(21074170-21074214)
chr5 (190-234)||(22336990-22337034)
chr5 (190-234)||(22340528-22340572)
chr5 (190-234)||(22367056-22367100)
chr5 (190-234)||(22750611-22750655)
chr5 (187-235)||(23199727-23199775)
chr5 (190-234)||(25426281-25426325)
chr5 (185-229)||(36460645-36460689)
chr5 (186-234)||(37804407-37804455)
chr5 (196-235)||(19511856-19511895)
chr5 (186-233)||(20566225-20566272)
chr5 (196-235)||(38145082-38145121)
chr5 (186-232)||(23065125-23065171)
chr5 (189-234)||(9776775-9776820)
chr5 (186-235)||(19921302-19921351)
chr5 (188-233)||(21557380-21557425)
chr5 (185-233)||(17909138-17909186)
chr5 (187-227)||(40917308-40917348)
chr5 (190-234)||(43443970-43444014)
[»] chr8 (67 HSPs)
chr8 (3-235)||(21860771-21861003)
chr8 (3-235)||(15635332-15635563)
chr8 (183-233)||(21399381-21399431)
chr8 (183-233)||(21793874-21793924)
chr8 (186-235)||(4381127-4381176)
chr8 (186-235)||(18024029-18024078)
chr8 (187-235)||(18834140-18834188)
chr8 (185-233)||(23478751-23478799)
chr8 (185-233)||(44432533-44432581)
chr8 (186-233)||(36405394-36405441)
chr8 (188-235)||(38185422-38185469)
chr8 (186-232)||(1485013-1485059)
chr8 (186-232)||(4483891-4483937)
chr8 (186-232)||(5852797-5852843)
chr8 (185-235)||(8414082-8414132)
chr8 (185-235)||(11775391-11775441)
chr8 (186-232)||(14408949-14408995)
chr8 (185-235)||(16198503-16198553)
chr8 (185-235)||(19880497-19880547)
chr8 (185-235)||(19882637-19882687)
chr8 (185-235)||(26454380-26454430)
chr8 (186-235)||(17795901-17795950)
chr8 (186-235)||(19140434-19140483)
chr8 (186-235)||(20178855-20178904)
chr8 (186-235)||(22207936-22207985)
chr8 (186-235)||(22474420-22474469)
chr8 (168-229)||(23883529-23883590)
chr8 (185-234)||(25657849-25657898)
chr8 (185-233)||(364459-364507)
chr8 (195-235)||(6102096-6102136)
chr8 (186-234)||(18816813-18816861)
chr8 (195-235)||(36732867-36732907)
chr8 (186-234)||(42818241-42818289)
chr8 (186-233)||(6573391-6573438)
chr8 (155-234)||(12037759-12037838)
chr8 (187-230)||(18677570-18677613)
chr8 (188-235)||(19331913-19331960)
chr8 (186-233)||(20083972-20084019)
chr8 (188-235)||(25295801-25295848)
chr8 (188-235)||(25757821-25757868)
chr8 (188-234)||(5082548-5082594)
chr8 (189-235)||(5761202-5761248)
chr8 (185-235)||(22483415-22483465)
chr8 (186-232)||(23914595-23914641)
chr8 (195-233)||(25483817-25483855)
chr8 (190-235)||(27941227-27941272)
chr8 (186-235)||(39936345-39936394)
chr8 (190-234)||(223266-223310)
chr8 (190-234)||(688037-688081)
chr8 (190-234)||(736889-736933)
chr8 (190-234)||(860784-860828)
chr8 (186-230)||(4541878-4541922)
chr8 (186-230)||(29763203-29763247)
chr8 (185-229)||(42559861-42559905)
chr8 (186-233)||(21513990-21514037)
chr8 (187-230)||(24485549-24485592)
chr8 (196-235)||(44477093-44477132)
chr8 (196-235)||(44480355-44480394)
chr8 (186-232)||(14824386-14824432)
chr8 (185-235)||(18612055-18612105)
chr8 (186-232)||(20045700-20045746)
chr8 (168-229)||(20879017-20879079)
chr8 (186-232)||(45290052-45290098)
chr8 (185-234)||(22147081-22147130)
chr8 (186-235)||(22258638-22258687)
chr8 (187-235)||(17437653-17437701)
chr8 (185-233)||(24907445-24907493)
[»] chr7 (107 HSPs)
chr7 (3-232)||(14153112-14153352)
chr7 (3-235)||(37727078-37727310)
chr7 (3-150)||(42041825-42041983)
chr7 (3-78)||(15726069-15726144)
chr7 (183-235)||(15720418-15720470)
chr7 (155-235)||(33556672-33556752)
chr7 (155-234)||(42566409-42566488)
chr7 (185-235)||(1856733-1856783)
chr7 (186-232)||(14259024-14259070)
chr7 (168-234)||(18570152-18570218)
chr7 (155-229)||(36301262-36301336)
chr7 (186-235)||(3287659-3287708)
chr7 (186-235)||(8851493-8851542)
chr7 (186-235)||(12127497-12127546)
chr7 (186-235)||(12371944-12371993)
chr7 (186-235)||(12465594-12465643)
chr7 (183-235)||(58749-58801)
chr7 (187-235)||(14928667-14928715)
chr7 (187-235)||(15352133-15352181)
chr7 (185-233)||(30820589-30820637)
chr7 (187-235)||(34957840-34957888)
chr7 (185-233)||(38828732-38828780)
chr7 (168-235)||(8931406-8931473)
chr7 (188-235)||(46386423-46386470)
chr7 (186-233)||(47094751-47094798)
chr7 (186-232)||(456932-456978)
chr7 (185-235)||(11661774-11661824)
chr7 (186-232)||(13869957-13870003)
chr7 (186-232)||(15376218-15376264)
chr7 (185-235)||(20252685-20252735)
chr7 (186-232)||(20384628-20384674)
chr7 (185-235)||(25926633-25926683)
chr7 (185-235)||(29052488-29052538)
chr7 (185-235)||(32160535-32160585)
chr7 (185-235)||(36685582-36685632)
chr7 (186-232)||(45847159-45847205)
chr7 (186-235)||(832357-832406)
chr7 (186-235)||(1197537-1197586)
chr7 (186-235)||(13147806-13147855)
chr7 (190-235)||(14317740-14317785)
chr7 (186-235)||(15576167-15576216)
chr7 (186-235)||(20586021-20586070)
chr7 (186-235)||(43277077-43277126)
chr7 (186-235)||(44374615-44374664)
chr7 (186-235)||(44383480-44383529)
chr7 (186-235)||(48213279-48213328)
chr7 (187-235)||(8514081-8514129)
chr7 (186-234)||(11303857-11303905)
chr7 (186-234)||(12323264-12323312)
chr7 (186-234)||(23664457-23664505)
chr7 (186-234)||(29797220-29797268)
chr7 (186-234)||(29801039-29801087)
chr7 (195-235)||(32433932-32433972)
chr7 (162-234)||(33059838-33059910)
chr7 (187-235)||(37539077-37539125)
chr7 (155-235)||(38294953-38295033)
chr7 (155-234)||(13316663-13316742)
chr7 (185-235)||(17070625-17070676)
chr7 (188-235)||(24270318-24270365)
chr7 (188-235)||(32301851-32301898)
chr7 (185-235)||(13917906-13917956)
chr7 (185-235)||(14415817-14415867)
chr7 (186-232)||(16460327-16460373)
chr7 (185-235)||(16550337-16550387)
chr7 (186-232)||(16580332-16580378)
chr7 (185-235)||(16615275-16615325)
chr7 (185-235)||(19194820-19194870)
chr7 (186-232)||(27217472-27217518)
chr7 (185-235)||(39431561-39431611)
chr7 (190-235)||(148087-148132)
chr7 (190-235)||(10896332-10896377)
chr7 (185-234)||(14188627-14188676)
chr7 (190-235)||(14422454-14422499)
chr7 (190-235)||(14566671-14566716)
chr7 (195-232)||(16233132-16233169)
chr7 (190-235)||(18872829-18872874)
chr7 (185-233)||(8563924-8563972)
chr7 (188-232)||(11392806-11392850)
chr7 (187-235)||(13745111-13745159)
chr7 (190-234)||(15167645-15167689)
chr7 (185-229)||(15214174-15214218)
chr7 (190-234)||(16108197-16108241)
chr7 (195-235)||(16462705-16462745)
chr7 (185-229)||(18985065-18985109)
chr7 (185-229)||(18999693-18999737)
chr7 (186-234)||(19282762-19282810)
chr7 (188-232)||(20488052-20488096)
chr7 (187-235)||(25942106-25942154)
chr7 (188-232)||(32126102-32126146)
chr7 (195-235)||(44190592-44190632)
chr7 (187-230)||(14948628-14948671)
chr7 (196-235)||(16009047-16009086)
chr7 (187-230)||(41523531-41523574)
chr7 (187-230)||(41525993-41526036)
chr7 (185-235)||(708888-708938)
chr7 (186-232)||(4691230-4691276)
chr7 (185-227)||(12755039-12755081)
chr7 (185-235)||(13647911-13647961)
chr7 (186-232)||(14161189-14161235)
chr7 (186-232)||(16410670-16410716)
chr7 (188-233)||(3136962-3137007)
chr7 (186-235)||(11067137-11067186)
chr7 (186-235)||(18875180-18875229)
chr7 (188-233)||(32771999-32772044)
chr7 (196-232)||(11287082-11287118)
chr7 (188-232)||(16999104-16999148)
chr7 (190-234)||(18607957-18608001)
[»] scaffold1783 (1 HSPs)
scaffold1783 (3-235)||(918-1161)
[»] chr3 (102 HSPs)
chr3 (3-235)||(1988372-1988615)
chr3 (157-234)||(8927970-8928047)
chr3 (3-74)||(8927794-8927865)
chr3 (154-234)||(6156375-6156455)
chr3 (157-229)||(48044052-48044124)
chr3 (153-234)||(21845984-21846065)
chr3 (154-229)||(48630801-48630876)
chr3 (178-235)||(54875809-54875866)
chr3 (163-227)||(3161232-3161296)
chr3 (155-235)||(3527781-3527861)
chr3 (155-235)||(12917937-12918017)
chr3 (155-234)||(15025687-15025766)
chr3 (167-234)||(25201537-25201604)
chr3 (185-235)||(42196-42246)
chr3 (183-233)||(6159068-6159118)
chr3 (185-235)||(10833672-10833722)
chr3 (185-235)||(13519952-13520002)
chr3 (185-235)||(14647436-14647486)
chr3 (185-235)||(30123782-30123832)
chr3 (185-235)||(54521431-54521481)
chr3 (186-235)||(40807665-40807714)
chr3 (186-235)||(40812502-40812551)
chr3 (186-235)||(44274088-44274137)
chr3 (186-234)||(5205988-5206036)
chr3 (183-235)||(17208009-17208061)
chr3 (183-235)||(17670040-17670092)
chr3 (187-235)||(24546509-24546557)
chr3 (172-235)||(43549997-43550060)
chr3 (189-235)||(10563378-10563424)
chr3 (185-235)||(10989137-10989187)
chr3 (188-234)||(12470472-12470518)
chr3 (186-232)||(12511520-12511566)
chr3 (185-235)||(15465763-15465813)
chr3 (185-235)||(16324874-16324924)
chr3 (186-232)||(17463789-17463835)
chr3 (186-232)||(17693740-17693786)
chr3 (186-232)||(34159937-34159983)
chr3 (189-235)||(35354271-35354317)
chr3 (186-235)||(5223992-5224041)
chr3 (186-235)||(13436907-13436956)
chr3 (186-235)||(17538775-17538824)
chr3 (187-232)||(28848127-28848172)
chr3 (186-235)||(35064915-35064964)
chr3 (186-235)||(41172705-41172753)
chr3 (186-235)||(50348360-50348409)
chr3 (188-232)||(10247230-10247274)
chr3 (186-234)||(12305732-12305780)
chr3 (187-235)||(14152734-14152782)
chr3 (195-235)||(17519216-17519256)
chr3 (195-235)||(17534078-17534118)
chr3 (183-235)||(17685174-17685226)
chr3 (185-233)||(31224286-31224334)
chr3 (188-232)||(45606413-45606457)
chr3 (188-232)||(55477102-55477146)
chr3 (196-235)||(5215316-5215355)
chr3 (188-235)||(43889135-43889182)
chr3 (186-232)||(13151295-13151341)
chr3 (186-232)||(13153761-13153807)
chr3 (183-233)||(14519933-14519983)
chr3 (186-232)||(15413042-15413088)
chr3 (185-235)||(16979579-16979629)
chr3 (188-234)||(22763966-22764012)
chr3 (189-235)||(26054772-26054818)
chr3 (186-235)||(11259099-11259148)
chr3 (188-229)||(11913396-11913437)
chr3 (190-235)||(14763299-14763344)
chr3 (186-235)||(17044635-17044684)
chr3 (190-235)||(20248322-20248367)
chr3 (190-235)||(38311341-38311386)
chr3 (183-235)||(14441837-14441888)
chr3 (195-235)||(14508516-14508556)
chr3 (185-233)||(19444182-19444229)
chr3 (190-234)||(27840563-27840607)
chr3 (186-234)||(29544346-29544394)
chr3 (195-235)||(43929020-43929060)
chr3 (195-235)||(49900405-49900445)
chr3 (190-234)||(51158605-51158649)
chr3 (187-230)||(15978146-15978189)
chr3 (184-235)||(49231871-49231921)
chr3 (190-233)||(50755720-50755763)
chr3 (187-229)||(6468640-6468682)
chr3 (195-233)||(6805304-6805342)
chr3 (186-232)||(10541792-10541838)
chr3 (191-233)||(14641889-14641931)
chr3 (185-235)||(25104537-25104587)
chr3 (188-230)||(33564803-33564845)
chr3 (188-230)||(53646396-53646438)
chr3 (185-235)||(55291974-55292024)
chr3 (186-235)||(2841797-2841846)
chr3 (190-235)||(3803504-3803549)
chr3 (185-234)||(8269319-8269368)
chr3 (185-234)||(8276430-8276479)
chr3 (190-235)||(9533798-9533843)
chr3 (185-234)||(12808609-12808658)
chr3 (186-235)||(15931841-15931890)
chr3 (185-234)||(18739565-18739614)
chr3 (196-233)||(54330650-54330687)
chr3 (188-232)||(18699809-18699853)
chr3 (168-232)||(29907163-29907227)
chr3 (168-232)||(29948329-29948393)
chr3 (168-232)||(29997483-29997547)
chr3 (185-229)||(51602933-51602977)
[»] scaffold0338 (2 HSPs)
scaffold0338 (3-235)||(3082-3325)
scaffold0338 (190-235)||(8669-8714)
[»] chr6 (68 HSPs)
chr6 (3-235)||(15816898-15817141)
chr6 (3-150)||(29266005-29266163)
chr6 (3-78)||(1590017-1590092)
chr6 (3-75)||(1639701-1639773)
chr6 (185-235)||(19825822-19825872)
chr6 (185-235)||(19234754-19234804)
chr6 (185-235)||(23415573-23415623)
chr6 (185-235)||(27557331-27557381)
chr6 (185-235)||(35057173-35057223)
chr6 (186-235)||(27125810-27125859)
chr6 (188-235)||(22556918-22556965)
chr6 (186-232)||(2290685-2290731)
chr6 (185-235)||(8759850-8759900)
chr6 (186-232)||(18334097-18334143)
chr6 (185-235)||(23956531-23956581)
chr6 (186-232)||(24423158-24423204)
chr6 (186-232)||(33864889-33864935)
chr6 (186-235)||(15891045-15891094)
chr6 (186-235)||(18703233-18703282)
chr6 (186-235)||(18709168-18709217)
chr6 (186-235)||(19008879-19008928)
chr6 (186-235)||(19655563-19655612)
chr6 (186-235)||(19773043-19773092)
chr6 (189-234)||(20411009-20411054)
chr6 (186-235)||(23656008-23656057)
chr6 (190-235)||(23838668-23838713)
chr6 (186-235)||(25807801-25807850)
chr6 (188-233)||(29044981-29045026)
chr6 (186-235)||(31734375-31734424)
chr6 (185-229)||(7430198-7430242)
chr6 (188-232)||(8055641-8055685)
chr6 (186-234)||(12942799-12942847)
chr6 (186-234)||(28288841-28288889)
chr6 (187-235)||(32259515-32259563)
chr6 (186-233)||(7827643-7827690)
chr6 (188-235)||(13765015-13765062)
chr6 (196-235)||(15891923-15891962)
chr6 (188-230)||(12742931-12742973)
chr6 (185-235)||(15173788-15173838)
chr6 (186-232)||(19858427-19858473)
chr6 (185-235)||(25601610-25601660)
chr6 (190-232)||(34140965-34141007)
chr6 (190-232)||(34153581-34153623)
chr6 (194-235)||(4477327-4477368)
chr6 (198-235)||(7219208-7219245)
chr6 (186-235)||(15704945-15704994)
chr6 (186-235)||(17318456-17318505)
chr6 (185-229)||(963-1007)
chr6 (188-232)||(1540418-1540462)
chr6 (185-229)||(14593958-14594002)
chr6 (3-55)||(16884852-16884904)
chr6 (186-230)||(18928397-18928441)
chr6 (190-234)||(25175216-25175260)
chr6 (190-234)||(27654558-27654602)
chr6 (186-229)||(23150601-23150644)
chr6 (182-234)||(25921399-25921453)
chr6 (187-230)||(26923953-26923996)
chr6 (187-230)||(33862407-33862450)
chr6 (185-235)||(8767596-8767646)
chr6 (188-230)||(17883004-17883046)
chr6 (197-235)||(31022042-31022080)
chr6 (190-235)||(22806418-22806463)
chr6 (186-235)||(27330306-27330355)
chr6 (186-235)||(27391046-27391095)
chr6 (188-229)||(34296604-34296645)
chr6 (188-232)||(13285380-13285424)
chr6 (185-229)||(18452328-18452372)
chr6 (183-235)||(18455403-18455455)
[»] scaffold0042 (1 HSPs)
scaffold0042 (3-197)||(67313-67518)
[»] scaffold0001 (3 HSPs)
scaffold0001 (3-235)||(152350-152593)
scaffold0001 (196-235)||(169108-169147)
scaffold0001 (196-235)||(176461-176500)
[»] scaffold0607 (1 HSPs)
scaffold0607 (3-235)||(3375-3621)
[»] scaffold0023 (2 HSPs)
scaffold0023 (3-235)||(105580-105815)
scaffold0023 (186-232)||(95022-95068)
[»] scaffold0008 (1 HSPs)
scaffold0008 (3-235)||(11646-11890)
[»] scaffold0575 (2 HSPs)
scaffold0575 (3-150)||(9131-9289)
scaffold0575 (186-232)||(5660-5706)
[»] scaffold0335 (1 HSPs)
scaffold0335 (3-235)||(1373-1606)
[»] scaffold0413 (2 HSPs)
scaffold0413 (154-235)||(11259-11340)
scaffold0413 (3-60)||(11417-11474)
[»] scaffold0071 (1 HSPs)
scaffold0071 (3-68)||(51750-51815)
[»] scaffold0007 (1 HSPs)
scaffold0007 (154-234)||(82692-82772)
[»] scaffold1354 (1 HSPs)
scaffold1354 (155-235)||(203-283)
[»] chr2 (67 HSPs)
chr2 (24-78)||(21903772-21903826)
chr2 (185-235)||(21081304-21081354)
chr2 (186-235)||(23338734-23338783)
chr2 (186-235)||(36839840-36839889)
chr2 (155-235)||(19196378-19196458)
chr2 (183-235)||(23068781-23068833)
chr2 (188-235)||(9975598-9975645)
chr2 (186-233)||(23610147-23610194)
chr2 (186-233)||(24781174-24781221)
chr2 (185-235)||(149880-149930)
chr2 (185-235)||(18358302-18358352)
chr2 (186-232)||(18809554-18809600)
chr2 (186-232)||(23131473-23131519)
chr2 (186-232)||(23133940-23133986)
chr2 (186-232)||(23711518-23711564)
chr2 (186-232)||(26505990-26506036)
chr2 (186-232)||(27920269-27920315)
chr2 (185-235)||(29113980-29114030)
chr2 (186-232)||(34402027-34402073)
chr2 (186-235)||(5031464-5031513)
chr2 (186-235)||(17307155-17307204)
chr2 (190-235)||(19201538-19201583)
chr2 (187-232)||(23136191-23136236)
chr2 (186-235)||(28652836-28652885)
chr2 (186-234)||(10684267-10684315)
chr2 (183-235)||(21368776-21368828)
chr2 (183-231)||(22686512-22686560)
chr2 (188-232)||(26508468-26508512)
chr2 (188-235)||(2524083-2524130)
chr2 (188-235)||(10039470-10039517)
chr2 (155-234)||(20006598-20006676)
chr2 (188-235)||(25183856-25183903)
chr2 (155-226)||(45527907-45527978)
chr2 (173-235)||(19646577-19646639)
chr2 (195-233)||(27484813-27484851)
chr2 (190-235)||(19661993-19662038)
chr2 (185-234)||(21915292-21915341)
chr2 (186-235)||(24515855-24515904)
chr2 (187-232)||(28577710-28577755)
chr2 (185-233)||(1384019-1384067)
chr2 (182-234)||(14179984-14180036)
chr2 (186-234)||(20261829-20261877)
chr2 (3-51)||(23086170-23086218)
chr2 (190-234)||(23759974-23760018)
chr2 (195-235)||(23968966-23969006)
chr2 (195-235)||(36734828-36734868)
chr2 (188-232)||(39682925-39682969)
chr2 (196-235)||(6260722-6260761)
chr2 (196-235)||(6483188-6483227)
chr2 (196-235)||(6486655-6486694)
chr2 (186-229)||(9785257-9785299)
chr2 (187-230)||(24897701-24897744)
chr2 (187-230)||(24900184-24900227)
chr2 (187-230)||(24902661-24902704)
chr2 (187-230)||(24905138-24905181)
chr2 (187-230)||(24907613-24907656)
chr2 (186-232)||(572009-572055)
chr2 (196-234)||(9242430-9242468)
chr2 (185-235)||(21132986-21133036)
chr2 (183-233)||(21335784-21335834)
chr2 (186-232)||(22690352-22690398)
chr2 (186-232)||(22694948-22694994)
chr2 (197-235)||(31345788-31345826)
chr2 (188-230)||(40911998-40912040)
chr2 (197-234)||(19887243-19887280)
chr2 (185-234)||(23778628-23778677)
chr2 (183-235)||(21315993-21316045)
[»] scaffold1160 (1 HSPs)
scaffold1160 (186-235)||(354-403)
[»] scaffold0217 (1 HSPs)
scaffold0217 (154-234)||(28084-28164)
[»] scaffold2015 (1 HSPs)
scaffold2015 (185-235)||(16-66)
[»] scaffold0436 (1 HSPs)
scaffold0436 (185-235)||(8627-8677)
[»] scaffold0200 (1 HSPs)
scaffold0200 (185-235)||(18262-18312)
[»] scaffold0026 (4 HSPs)
scaffold0026 (185-235)||(123893-123943)
scaffold0026 (186-235)||(146401-146450)
scaffold0026 (195-235)||(21750-21790)
scaffold0026 (196-235)||(111156-111195)
[»] scaffold0737 (1 HSPs)
scaffold0737 (186-235)||(5047-5096)
[»] scaffold0385 (1 HSPs)
scaffold0385 (186-235)||(13-62)
[»] scaffold0048 (1 HSPs)
scaffold0048 (186-235)||(56645-56694)
[»] scaffold0577 (1 HSPs)
scaffold0577 (185-233)||(6118-6166)
[»] scaffold0546 (2 HSPs)
scaffold0546 (185-233)||(10250-10298)
scaffold0546 (188-232)||(7647-7691)
[»] scaffold0109 (3 HSPs)
scaffold0109 (185-233)||(3009-3057)
scaffold0109 (188-232)||(314-358)
scaffold0109 (188-232)||(5616-5660)
[»] scaffold0108 (2 HSPs)
scaffold0108 (183-235)||(7114-7166)
scaffold0108 (190-235)||(6086-6131)
[»] scaffold0077 (5 HSPs)
scaffold0077 (185-233)||(17590-17638)
scaffold0077 (187-235)||(40072-40120)
scaffold0077 (188-235)||(34008-34055)
scaffold0077 (185-233)||(22512-22560)
scaffold0077 (185-233)||(23240-23287)
[»] scaffold0058 (2 HSPs)
scaffold0058 (155-227)||(60270-60342)
scaffold0058 (185-235)||(6127-6177)
[»] scaffold0004 (2 HSPs)
scaffold0004 (183-235)||(66363-66415)
scaffold0004 (173-231)||(75014-75072)
[»] scaffold0138 (1 HSPs)
scaffold0138 (188-235)||(33780-33827)
[»] scaffold0444 (1 HSPs)
scaffold0444 (186-232)||(14004-14050)
[»] scaffold0328 (1 HSPs)
scaffold0328 (185-235)||(18977-19027)
[»] scaffold0293 (1 HSPs)
scaffold0293 (185-235)||(19592-19642)
[»] scaffold0203 (1 HSPs)
scaffold0203 (186-232)||(18460-18506)
[»] scaffold0134 (1 HSPs)
scaffold0134 (186-232)||(38433-38479)
[»] scaffold0044 (2 HSPs)
scaffold0044 (186-232)||(41011-41057)
scaffold0044 (190-235)||(37962-38007)
[»] scaffold1766 (1 HSPs)
scaffold1766 (186-235)||(1030-1079)
[»] scaffold1283 (1 HSPs)
scaffold1283 (188-233)||(803-848)
[»] scaffold0462 (3 HSPs)
scaffold0462 (186-235)||(10890-10939)
scaffold0462 (186-235)||(987-1037)
scaffold0462 (186-235)||(6493-6543)
[»] scaffold0431 (1 HSPs)
scaffold0431 (190-235)||(5298-5343)
[»] scaffold0422 (1 HSPs)
scaffold0422 (186-235)||(3632-3681)
[»] scaffold0414 (1 HSPs)
scaffold0414 (186-235)||(11681-11730)
[»] scaffold0292 (1 HSPs)
scaffold0292 (190-235)||(7182-7227)
[»] scaffold0205 (1 HSPs)
scaffold0205 (190-235)||(30281-30326)
[»] scaffold0180 (1 HSPs)
scaffold0180 (186-235)||(10104-10153)
[»] scaffold0051 (2 HSPs)
scaffold0051 (185-234)||(31813-31862)
scaffold0051 (195-235)||(64412-64452)
[»] scaffold0047 (1 HSPs)
scaffold0047 (186-235)||(78733-78782)
[»] scaffold0020 (2 HSPs)
scaffold0020 (186-235)||(169333-169382)
scaffold0020 (188-235)||(143282-143329)
[»] scaffold0005 (1 HSPs)
scaffold0005 (186-235)||(186839-186888)
[»] scaffold0098 (1 HSPs)
scaffold0098 (183-235)||(39768-39820)
[»] scaffold1186 (1 HSPs)
scaffold1186 (186-229)||(1386-1429)
[»] scaffold0635 (1 HSPs)
scaffold0635 (188-235)||(7553-7600)
[»] scaffold0452 (1 HSPs)
scaffold0452 (190-233)||(13003-13046)
[»] scaffold0401 (1 HSPs)
scaffold0401 (188-235)||(8489-8536)
[»] scaffold0162 (1 HSPs)
scaffold0162 (187-234)||(24398-24445)
[»] scaffold0080 (1 HSPs)
scaffold0080 (186-233)||(22125-22172)
[»] scaffold0046 (1 HSPs)
scaffold0046 (188-235)||(22105-22152)
[»] scaffold0034 (2 HSPs)
scaffold0034 (188-235)||(120579-120626)
scaffold0034 (185-235)||(29530-29580)
[»] scaffold0515 (1 HSPs)
scaffold0515 (185-235)||(4703-4753)
[»] scaffold0468 (1 HSPs)
scaffold0468 (185-235)||(11551-11601)
[»] scaffold0407 (1 HSPs)
scaffold0407 (186-232)||(11608-11654)
[»] scaffold0306 (1 HSPs)
scaffold0306 (185-235)||(4703-4753)
[»] scaffold0054 (1 HSPs)
scaffold0054 (186-232)||(65315-65361)
[»] scaffold0040 (2 HSPs)
scaffold0040 (186-232)||(13324-13370)
scaffold0040 (186-231)||(106537-106582)
[»] scaffold0039 (1 HSPs)
scaffold0039 (186-232)||(10263-10309)
[»] scaffold0018 (1 HSPs)
scaffold0018 (186-232)||(21324-21370)
[»] scaffold1404 (1 HSPs)
scaffold1404 (190-235)||(1478-1523)
[»] scaffold0599 (1 HSPs)
scaffold0599 (188-229)||(672-713)
[»] scaffold0241 (1 HSPs)
scaffold0241 (186-235)||(2233-2282)
[»] scaffold0213 (1 HSPs)
scaffold0213 (186-235)||(18833-18882)
[»] scaffold0174 (2 HSPs)
scaffold0174 (185-234)||(20407-20456)
scaffold0174 (172-232)||(15637-15697)
[»] scaffold0127 (1 HSPs)
scaffold0127 (194-235)||(9709-9750)
[»] scaffold0029 (1 HSPs)
scaffold0029 (187-232)||(11901-11946)
[»] scaffold0011 (2 HSPs)
scaffold0011 (186-235)||(126417-126466)
scaffold0011 (186-235)||(33122-33171)
[»] scaffold0676 (1 HSPs)
scaffold0676 (195-235)||(2556-2596)
[»] scaffold0334 (2 HSPs)
scaffold0334 (185-233)||(1756-1804)
scaffold0334 (186-235)||(185-234)
[»] scaffold0266 (1 HSPs)
scaffold0266 (190-234)||(829-873)
[»] scaffold0083 (1 HSPs)
scaffold0083 (185-233)||(1606-1654)
[»] scaffold0639 (1 HSPs)
scaffold0639 (188-235)||(6924-6971)
[»] scaffold0454 (1 HSPs)
scaffold0454 (187-230)||(190-233)
[»] scaffold0254 (1 HSPs)
scaffold0254 (187-230)||(21362-21405)
[»] scaffold0232 (1 HSPs)
scaffold0232 (186-229)||(3945-3988)
[»] scaffold0230 (1 HSPs)
scaffold0230 (187-230)||(14561-14604)
[»] scaffold0695 (1 HSPs)
scaffold0695 (186-232)||(6558-6604)
[»] scaffold0630 (1 HSPs)
scaffold0630 (186-232)||(8736-8782)
[»] scaffold0364 (1 HSPs)
scaffold0364 (185-235)||(7802-7852)
[»] scaffold0337 (1 HSPs)
scaffold0337 (190-232)||(9294-9336)
[»] scaffold0104 (2 HSPs)
scaffold0104 (185-235)||(7888-7938)
scaffold0104 (185-235)||(14519-14569)
[»] scaffold0057 (1 HSPs)
scaffold0057 (185-235)||(70161-70211)
[»] scaffold0016 (1 HSPs)
scaffold0016 (185-235)||(174481-174531)
[»] scaffold0439 (1 HSPs)
scaffold0439 (186-235)||(4089-4138)
[»] scaffold0100 (1 HSPs)
scaffold0100 (185-234)||(9808-9856)
[»] scaffold0070 (1 HSPs)
scaffold0070 (185-226)||(8735-8776)
[»] scaffold0063 (1 HSPs)
scaffold0063 (186-235)||(62386-62435)
[»] scaffold0061 (2 HSPs)
scaffold0061 (186-235)||(14920-14969)
scaffold0061 (186-235)||(23978-24027)
[»] scaffold0021 (1 HSPs)
scaffold0021 (190-235)||(169107-169152)
[»] scaffold0017 (1 HSPs)
scaffold0017 (155-216)||(23053-23114)
[»] scaffold0632 (1 HSPs)
scaffold0632 (183-235)||(834-886)
[»] scaffold0394 (1 HSPs)
scaffold0394 (185-229)||(7885-7929)
[»] scaffold0379 (1 HSPs)
scaffold0379 (185-233)||(10371-10419)
[»] scaffold0220 (1 HSPs)
scaffold0220 (191-235)||(13615-13659)
[»] scaffold0165 (1 HSPs)
scaffold0165 (185-229)||(31576-31620)
[»] scaffold0151 (1 HSPs)
scaffold0151 (186-234)||(9725-9773)
[»] scaffold0146 (1 HSPs)
scaffold0146 (188-232)||(22700-22744)
[»] scaffold0096 (1 HSPs)
scaffold0096 (187-235)||(21737-21785)
[»] scaffold0086 (1 HSPs)
scaffold0086 (195-235)||(35860-35900)
[»] scaffold0019 (2 HSPs)
scaffold0019 (190-234)||(33908-33952)
scaffold0019 (190-234)||(133502-133546)


Alignment Details
Target: scaffold0117 (Bit Score: 189; Significance: 1e-102; HSPs: 3)
Name: scaffold0117
Description:

Target: scaffold0117; HSP #1
Raw Score: 189; E-Value: 1e-102
Query Start/End: Original strand, 3 - 235
Target Start/End: Complemental strand, 21662 - 21430
Alignment:
Q  3 ggtgaaaaactgcagaattcacgtagtctggtctgtcgcgattcgccatggcggagagatatttcgcctggcggatatattcaccatttcctcgccagta 102  Q
    |||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||| |||||||||||| ||| |||||||||||||||||    
T  21662 ggtgaaaaactgcagaattcacgtagtctggtctgtcgcgattcaccatggcggagagatatttctcctggcggatattttcgccatttcctcgccagta 21563  T
Q  103 gttcgcctggcgaaacatcatagtagccactcgccttgagctcgccattaattcgccttgcgaaatgttcagtggcagactgccctgtttcgtgttcttg 202  Q
    |||||||||||||||||||| |||||||||||||||||||||| |||||| ||||||| || ||||||||||||||| |||||||| |||||||||||||    
T  21562 gttcgcctggcgaaacatcacagtagccactcgccttgagctcaccattagttcgcctggcaaaatgttcagtggcaaactgccctatttcgtgttcttg 21463  T
Q  203 cgtcttttacacacgtttctgttttgaattggc 235  Q
    |||||||||||||||||||||||||||||||||    
T  21462 cgtcttttacacacgtttctgttttgaattggc 21430  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0117; HSP #2
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 3 - 78
Target Start/End: Complemental strand, 34345 - 34270
Alignment:
Q  3 ggtgaaaaactgcagaattcacgtagtctggtctgtcgcgattcgccatggcggagagatatttcgcctggcggat 78  Q
    ||||||||||| ||||||||||||||||||||||||||||| ||||||||||| ||||||||||||||||||||||    
T  34345 ggtgaaaaacttcagaattcacgtagtctggtctgtcgcgaatcgccatggcgaagagatatttcgcctggcggat 34270  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0117; HSP #3
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 185 - 235
Target Start/End: Complemental strand, 42412 - 42362
Alignment:
Q  185 ccctgtttcgtgttcttgcgtcttttacacacgtttctgttttgaattggc 235  Q
    |||||||||| ||||||||||||||| || |||||||||||||||||||||    
T  42412 ccctgtttcgcgttcttgcgtctttttcatacgtttctgttttgaattggc 42362  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0216 (Bit Score: 181; Significance: 6e-98; HSPs: 1)
Name: scaffold0216
Description:

Target: scaffold0216; HSP #1
Raw Score: 181; E-Value: 6e-98
Query Start/End: Original strand, 3 - 235
Target Start/End: Complemental strand, 22156 - 21924
Alignment:
Q  3 ggtgaaaaactgcagaattcacgtagtctggtctgtcgcgattcgccatggcggagagatatttcgcctggcggatatattcaccatttcctcgccagta 102  Q
    ||||||||||||||||||||||||| ||||||||||||||||||||||||| |||||||||||||||||| ||||||| ||| |||||||||||||||||    
T  22156 ggtgaaaaactgcagaattcacgtaatctggtctgtcgcgattcgccatggtggagagatatttcgcctgccggatattttcgccatttcctcgccagta 22057  T
Q  103 gttcgcctggcgaaacatcatagtagccactcgccttgagctcgccattaattcgccttgcgaaatgttcagtggcagactgccctgtttcgtgttcttg 202  Q
    |||||||| ||||||||||| ||||||||||||||||||||||||||||| ||||| | |||||||||| |||||||||||||||||||| ||||||||     
T  22056 gttcgccttgcgaaacatcacagtagccactcgccttgagctcgccattagttcgcttggcgaaatgtttagtggcagactgccctgttttgtgttctta 21957  T
Q  203 cgtcttttacacacgtttctgttttgaattggc 235  Q
    |||||||||||||||||||||||||||||||||    
T  21956 cgtcttttacacacgtttctgttttgaattggc 21924  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 178; Significance: 4e-96; HSPs: 48)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 178; E-Value: 4e-96
Query Start/End: Original strand, 3 - 232
Target Start/End: Complemental strand, 29535892 - 29535663
Alignment:
Q  3 ggtgaaaaactgcagaattcacgtagtctggtctgtcgcgattcgccatggcggagagatatttcgcctggcggatatattcaccatttcctcgccagta 102  Q
    |||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| |||||||||||||| ||    
T  29535892 ggtgaaaaactgcagaattcacatagtctggtctgtcgcgattcgccatggcggagagatatttcgcctggcggatattttcgccatttcctcgccatta 29535793  T
Q  103 gttcgcctggcgaaacatcatagtagccactcgccttgagctcgccattaattcgccttgcgaaatgttcagtggcagactgccctgtttcgtgttcttg 202  Q
    ||||||||| |||||| ||| |||||| |||||||||||||||||||||| ||||||| |||||||||||||||||||||| |||||||||| |||||||    
T  29535792 gttcgcctgacgaaacgtcacagtagctactcgccttgagctcgccattagttcgcctggcgaaatgttcagtggcagactaccctgtttcgcgttcttg 29535693  T
Q  203 cgtcttttacacacgtttctgttttgaatt 232  Q
    |||||||| |||||||||||||||||||||    
T  29535692 cgtctttttcacacgtttctgttttgaatt 29535663  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 165; E-Value: 2e-88
Query Start/End: Original strand, 3 - 235
Target Start/End: Complemental strand, 13227704 - 13227472
Alignment:
Q  3 ggtgaaaaactgcagaattcacgtagtctggtctgtcgcgattcgccatggcggagagatatttcgcctggcggatatattcaccatttcctcgccagta 102  Q
    |||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||| |||||||||| ||  |||||||||||||| ||    
T  13227704 ggtgaaaaactgcagaattcacgtagtctggtctgtcgtgattcgccatggcggagagatatttcgcttggcggatatttttgccatttcctcgccatta 13227605  T
Q  103 gttcgcctggcgaaacatcatagtagccactcgccttgagctcgccattaattcgccttgcgaaatgttcagtggcagactgccctgtttcgtgttcttg 202  Q
    |||||||||| ||||||||| |||||| |||||||||||||||||||||| ||||||| |||||||||||||||||||||| ||||||||   |||||||    
T  13227604 gttcgcctggagaaacatcacagtagctactcgccttgagctcgccattagttcgcctggcgaaatgttcagtggcagactaccctgttttacgttcttg 13227505  T
Q  203 cgtcttttacacacgtttctgttttgaattggc 235  Q
    |||||||| |||||||||||| |||||||||||    
T  13227504 cgtctttttcacacgtttctgatttgaattggc 13227472  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 124 - 235
Target Start/End: Original strand, 21180597 - 21180708
Alignment:
Q  124 agtagccactcgccttgagctcgccattaattcgccttgcgaaatgttcagtggcagactgccctgtttcgtgttcttgcgtcttttacacacgtttctg 223  Q
    |||||||||||||||    |||||||||| ||||||| ||||||||||||||||||||||||||| ||||||||||||||||||||| ||||||||||||    
T  21180597 agtagccactcgcctccttctcgccattagttcgcctggcgaaatgttcagtggcagactgccctatttcgtgttcttgcgtctttttcacacgtttctg 21180696  T
Q  224 ttttgaattggc 235  Q
    ||||||||||||    
T  21180697 ttttgaattggc 21180708  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 72; E-Value: 7e-33
Query Start/End: Original strand, 3 - 78
Target Start/End: Complemental strand, 24960701 - 24960626
Alignment:
Q  3 ggtgaaaaactgcagaattcacgtagtctggtctgtcgcgattcgccatggcggagagatatttcgcctggcggat 78  Q
    ||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||    
T  24960701 ggtgaaaaactgcagaattcacgtagtctggtctgtcgcaattcgccatggcggagagatatttcgcctggcggat 24960626  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 3 - 74
Target Start/End: Original strand, 21180515 - 21180586
Alignment:
Q  3 ggtgaaaaactgcagaattcacgtagtctggtctgtcgcgattcgccatggcggagagatatttcgcctggc 74  Q
    |||||||||||  |||||||||||||||||||||||||| |||||||||||| |||||||||||||||||||    
T  21180515 ggtgaaaaactatagaattcacgtagtctggtctgtcgctattcgccatggcagagagatatttcgcctggc 21180586  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 155 - 234
Target Start/End: Original strand, 21189971 - 21190050
Alignment:
Q  155 tcgccttgcgaaatgttcagtggcagactgccctgtttcgtgttcttgcgtcttttacacacgtttctgttttgaattgg 234  Q
    |||||| ||||| || |||||||||| |||||||||||||||||||||||||| || ||||||||||| |||||| ||||    
T  21189971 tcgcctcgcgaattgctcagtggcagcctgccctgtttcgtgttcttgcgtctgtttcacacgtttctattttgagttgg 21190050  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 86 - 150
Target Start/End: Complemental strand, 24960556 - 24960492
Alignment:
Q  86 ccatttcctcgccagtagttcgcctggcgaaacatcatagtagccactcgccttgagctcgccat 150  Q
    |||||||||||||| |||||||||||||||||||||  ||||||||||||||||  |||||||||    
T  24960556 ccatttcctcgccattagttcgcctggcgaaacatctcagtagccactcgccttttgctcgccat 24960492  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 168 - 234
Target Start/End: Complemental strand, 35893664 - 35893598
Alignment:
Q  168 tgttcagtggcagactgccctgtttcgtgttcttgcgtcttttacacacgtttctgttttgaattgg 234  Q
    ||||||||||||| ||||||||||||| |||||||||||| || || ||||||||||||| ||||||    
T  35893664 tgttcagtggcagtctgccctgtttcgcgttcttgcgtctgtttcatacgtttctgttttaaattgg 35893598  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 186 - 235
Target Start/End: Complemental strand, 297073 - 297024
Alignment:
Q  186 cctgtttcgtgttcttgcgtcttttacacacgtttctgttttgaattggc 235  Q
    ||||||||| ||||||||||||||| ||||||||||||||||||||||||    
T  297073 cctgtttcgcgttcttgcgtctttttcacacgtttctgttttgaattggc 297024  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 186 - 235
Target Start/End: Original strand, 16058648 - 16058697
Alignment:
Q  186 cctgtttcgtgttcttgcgtcttttacacacgtttctgttttgaattggc 235  Q
    |||||||| |||||||||||||||| ||||||||||||||||||||||||    
T  16058648 cctgtttcatgttcttgcgtctttttcacacgtttctgttttgaattggc 16058697  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 185 - 234
Target Start/End: Complemental strand, 28313067 - 28313018
Alignment:
Q  185 ccctgtttcgtgttcttgcgtcttttacacacgtttctgttttgaattgg 234  Q
    |||||||||| ||||||||||||||| |||||||||||||||||||||||    
T  28313067 ccctgtttcgcgttcttgcgtctttttcacacgtttctgttttgaattgg 28313018  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 185 - 233
Target Start/End: Original strand, 2332543 - 2332591
Alignment:
Q  185 ccctgtttcgtgttcttgcgtcttttacacacgtttctgttttgaattg 233  Q
    ||||||||| |||||||||||||||| ||||||||||||||||||||||    
T  2332543 ccctgtttcatgttcttgcgtctttttcacacgtttctgttttgaattg 2332591  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 187 - 235
Target Start/End: Original strand, 14792897 - 14792945
Alignment:
Q  187 ctgtttcgtgttcttgcgtcttttacacacgtttctgttttgaattggc 235  Q
    ||||||| |||||||||||||||| ||||||||||||||||||||||||    
T  14792897 ctgtttcatgttcttgcgtctttttcacacgtttctgttttgaattggc 14792945  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 186 - 234
Target Start/End: Complemental strand, 44892165 - 44892117
Alignment:
Q  186 cctgtttcgtgttcttgcgtcttttacacacgtttctgttttgaattgg 234  Q
    |||||||| |||||||||||||||| |||||||||||||||||||||||    
T  44892165 cctgtttcatgttcttgcgtctttttcacacgtttctgttttgaattgg 44892117  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 185 - 232
Target Start/End: Complemental strand, 50001193 - 50001146
Alignment:
Q  185 ccctgtttcgtgttcttgcgtcttttacacacgtttctgttttgaatt 232  Q
    |||||||||| ||||||||||||||| |||||||||||||||||||||    
T  50001193 ccctgtttcgcgttcttgcgtcttttgcacacgtttctgttttgaatt 50001146  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 186 - 232
Target Start/End: Complemental strand, 13989523 - 13989477
Alignment:
Q  186 cctgtttcgtgttcttgcgtcttttacacacgtttctgttttgaatt 232  Q
    |||||||| |||||||||||||||| |||||||||||||||||||||    
T  13989523 cctgtttcatgttcttgcgtctttttcacacgtttctgttttgaatt 13989477  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 186 - 232
Target Start/End: Original strand, 21046383 - 21046429
Alignment:
Q  186 cctgtttcgtgttcttgcgtcttttacacacgtttctgttttgaatt 232  Q
    |||||||| |||||||||||||||| |||||||||||||||||||||    
T  21046383 cctgtttcatgttcttgcgtctttttcacacgtttctgttttgaatt 21046429  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 186 - 232
Target Start/End: Original strand, 21474591 - 21474637
Alignment:
Q  186 cctgtttcgtgttcttgcgtcttttacacacgtttctgttttgaatt 232  Q
    |||||||| |||||||||||||||| |||||||||||||||||||||    
T  21474591 cctgtttcatgttcttgcgtctttttcacacgtttctgttttgaatt 21474637  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 185 - 235
Target Start/End: Original strand, 38056984 - 38057034
Alignment:
Q  185 ccctgtttcgtgttcttgcgtcttttacacacgtttctgttttgaattggc 235  Q
    |||||||||| ||||||||||||||| ||||||||| ||||||||||||||    
T  38056984 ccctgtttcgcgttcttgcgtctttttcacacgtttttgttttgaattggc 38057034  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 185 - 235
Target Start/End: Complemental strand, 45496665 - 45496615
Alignment:
Q  185 ccctgtttcgtgttcttgcgtcttttacacacgtttctgttttgaattggc 235  Q
    ||||||||| ||||||||||| |||| ||||||||||||||||||||||||    
T  45496665 ccctgtttcatgttcttgcgtgtttttcacacgtttctgttttgaattggc 45496615  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 185 - 235
Target Start/End: Original strand, 45574385 - 45574435
Alignment:
Q  185 ccctgtttcgtgttcttgcgtcttttacacacgtttctgttttgaattggc 235  Q
    ||||||||  |||||||||||||||| ||||||||||||||||||||||||    
T  45574385 ccctgttttatgttcttgcgtctttttcacacgtttctgttttgaattggc 45574435  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 186 - 235
Target Start/End: Complemental strand, 1643311 - 1643262
Alignment:
Q  186 cctgtttcgtgttcttgcgtcttttacacacgtttctgttttgaattggc 235  Q
    |||||||| ||||||||||| |||| ||||||||||||||||||||||||    
T  1643311 cctgtttcatgttcttgcgtatttttcacacgtttctgttttgaattggc 1643262  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 190 - 235
Target Start/End: Original strand, 4596183 - 4596228
Alignment:
Q  190 tttcgtgttcttgcgtcttttacacacgtttctgttttgaattggc 235  Q
    |||| |||||||||||||||| ||||||||||||||||||||||||    
T  4596183 tttcatgttcttgcgtctttttcacacgtttctgttttgaattggc 4596228  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 190 - 235
Target Start/End: Complemental strand, 19676425 - 19676380
Alignment:
Q  190 tttcgtgttcttgcgtcttttacacacgtttctgttttgaattggc 235  Q
    |||| |||||||||||||||| ||||||||||||||||||||||||    
T  19676425 tttcatgttcttgcgtctttttcacacgtttctgttttgaattggc 19676380  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 186 - 235
Target Start/End: Original strand, 20633968 - 20634017
Alignment:
Q  186 cctgtttcgtgttcttgcgtcttttacacacgtttctgttttgaattggc 235  Q
    |||||||| |||||||| ||||||| ||||||||||||||||||||||||    
T  20633968 cctgtttcatgttcttgtgtcttttccacacgtttctgttttgaattggc 20634017  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 186 - 235
Target Start/End: Original strand, 41225789 - 41225838
Alignment:
Q  186 cctgtttcgtgttcttgcgtcttttacacacgtttctgttttgaattggc 235  Q
    |||||||| |||||||||||||||| ||||||||| ||||||||||||||    
T  41225789 cctgtttcatgttcttgcgtctttttcacacgtttatgttttgaattggc 41225838  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 186 - 235
Target Start/End: Original strand, 41227042 - 41227091
Alignment:
Q  186 cctgtttcgtgttcttgcgtcttttacacacgtttctgttttgaattggc 235  Q
    |||||||| |||||||||||||||| ||||||||| ||||||||||||||    
T  41227042 cctgtttcatgttcttgcgtctttttcacacgtttatgttttgaattggc 41227091  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 185 - 233
Target Start/End: Complemental strand, 6833933 - 6833885
Alignment:
Q  185 ccctgtttcgtgttcttgcgtcttttacacacgtttctgttttgaattg 233  Q
    ||||||||| | |||||||||||||| ||||||||||||||||||||||    
T  6833933 ccctgtttcatattcttgcgtctttttcacacgtttctgttttgaattg 6833885  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 187 - 235
Target Start/End: Complemental strand, 18121321 - 18121273
Alignment:
Q  187 ctgtttcgtgttcttgcgtcttttacacacgtttctgttttgaattggc 235  Q
    ||||||| |||||||||||||||| ||||| ||||||||||||||||||    
T  18121321 ctgtttcatgttcttgcgtctttttcacacttttctgttttgaattggc 18121273  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 187 - 235
Target Start/End: Original strand, 38887422 - 38887470
Alignment:
Q  187 ctgtttcgtgttcttgcgtcttttacacacgtttctgttttgaattggc 235  Q
    ||||||| |||||||||||||||| ||||||||| ||||||||||||||    
T  38887422 ctgtttcatgttcttgcgtctttttcacacgtttttgttttgaattggc 38887470  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 196 - 235
Target Start/End: Complemental strand, 12710596 - 12710557
Alignment:
Q  196 gttcttgcgtcttttacacacgtttctgttttgaattggc 235  Q
    ||||||||||||||| ||||||||||||||||||||||||    
T  12710596 gttcttgcgtctttttcacacgtttctgttttgaattggc 12710557  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 185 - 235
Target Start/End: Original strand, 8276325 - 8276375
Alignment:
Q  185 ccctgtttcgtgttcttgcgtcttttacacacgtttctgttttgaattggc 235  Q
    ||||||||||  |||||||||||||| ||||||||| ||||||||||||||    
T  8276325 ccctgtttcgcattcttgcgtctttttcacacgtttatgttttgaattggc 8276375  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 185 - 235
Target Start/End: Original strand, 22130398 - 22130448
Alignment:
Q  185 ccctgtttcgtgttcttgcgtcttttacacacgtttctgttttgaattggc 235  Q
    ||||||||  ||||||| |||||||| ||||||||||||||||||||||||    
T  22130398 ccctgttttatgttcttacgtctttttcacacgtttctgttttgaattggc 22130448  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 186 - 232
Target Start/End: Complemental strand, 51082934 - 51082888
Alignment:
Q  186 cctgtttcgtgttcttgcgtcttttacacacgtttctgttttgaatt 232  Q
    |||||||| |||||||||||||||| ||||||||| |||||||||||    
T  51082934 cctgtttcatgttcttgcgtctttttcacacgtttttgttttgaatt 51082888  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 190 - 235
Target Start/End: Original strand, 17902100 - 17902145
Alignment:
Q  190 tttcgtgttcttgcgtcttttacacacgtttctgttttgaattggc 235  Q
    |||| ||||||||||| |||| ||||||||||||||||||||||||    
T  17902100 tttcatgttcttgcgtttttttcacacgtttctgttttgaattggc 17902145  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 186 - 235
Target Start/End: Complemental strand, 20588396 - 20588348
Alignment:
Q  186 cctgtttcgtgttcttgcgtcttttacacacgtttctgttttgaattggc 235  Q
    |||||||| |||||||||||||||| |||||| |||||||||||||||||    
T  20588396 cctgtttcatgttcttgcgtctttttcacacg-ttctgttttgaattggc 20588348  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 186 - 235
Target Start/End: Complemental strand, 20592934 - 20592886
Alignment:
Q  186 cctgtttcgtgttcttgcgtcttttacacacgtttctgttttgaattggc 235  Q
    |||||||| |||||||||||||||| |||||| |||||||||||||||||    
T  20592934 cctgtttcatgttcttgcgtctttttcacacg-ttctgttttgaattggc 20592886  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 155 - 232
Target Start/End: Original strand, 21244330 - 21244407
Alignment:
Q  155 tcgccttgcgaaatgttcagtggcagactgccctgtttcgtgttcttgcgtcttttacacacgtttctgttttgaatt 232  Q
    |||||| ||||| || ||||||||||  |||| ||||||| |||||||||||| || || |||||||| |||||||||    
T  21244330 tcgcctcgcgaattgctcagtggcagtatgccatgtttcgcgttcttgcgtctgtttcatacgtttctattttgaatt 21244407  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 186 - 235
Target Start/End: Complemental strand, 42912768 - 42912719
Alignment:
Q  186 cctgtttcgtgttcttgcgtcttttacacacgtttctgttttgaattggc 235  Q
    |||||||| ||||||||| || ||| ||||||||||||||||||||||||    
T  42912768 cctgtttcatgttcttgcatcgttttcacacgtttctgttttgaattggc 42912719  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 190 - 235
Target Start/End: Complemental strand, 50544565 - 50544520
Alignment:
Q  190 tttcgtgttcttgcgtcttttacacacgtttctgttttgaattggc 235  Q
    |||| |||||||||||||||| ||| ||||||||||||||||||||    
T  50544565 tttcatgttcttgcgtctttttcacgcgtttctgttttgaattggc 50544520  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 190 - 234
Target Start/End: Complemental strand, 16372465 - 16372421
Alignment:
Q  190 tttcgtgttcttgcgtcttttacacacgtttctgttttgaattgg 234  Q
    |||||||||||||  |||||| |||||||||||||||||||||||    
T  16372465 tttcgtgttcttgtatctttttcacacgtttctgttttgaattgg 16372421  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 187 - 230
Target Start/End: Complemental strand, 21841423 - 21841380
Alignment:
Q  187 ctgtttcgtgttcttgcgtcttttacacacgtttctgttttgaa 230  Q
    ||||||| |||||||||||||||| |||||||||| ||||||||    
T  21841423 ctgtttcatgttcttgcgtctttttcacacgtttccgttttgaa 21841380  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 187 - 230
Target Start/End: Original strand, 21922797 - 21922840
Alignment:
Q  187 ctgtttcgtgttcttgcgtcttttacacacgtttctgttttgaa 230  Q
    ||||||| |||||||||||||||| |||||||||| ||||||||    
T  21922797 ctgtttcatgttcttgcgtctttttcacacgtttccgttttgaa 21922840  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 196 - 235
Target Start/End: Original strand, 46198069 - 46198108
Alignment:
Q  196 gttcttgcgtcttttacacacgtttctgttttgaattggc 235  Q
    ||||||||||||||| |||| |||||||||||||||||||    
T  46198069 gttcttgcgtctttttcacatgtttctgttttgaattggc 46198108  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 186 - 232
Target Start/End: Original strand, 14237946 - 14237992
Alignment:
Q  186 cctgtttcgtgttcttgcgtcttttacacacgtttctgttttgaatt 232  Q
    |||||||| |||| |||||| |||| |||||||||||||||||||||    
T  14237946 cctgtttcatgtttttgcgtttttttcacacgtttctgttttgaatt 14237992  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 185 - 235
Target Start/End: Original strand, 23194884 - 23194934
Alignment:
Q  185 ccctgtttcgtgttcttgcgtcttttacacacgtttctgttttgaattggc 235  Q
    ||||||||  |||||||||||||||| |||| |||||| ||||||||||||    
T  23194884 ccctgttttatgttcttgcgtctttttcacaagtttctattttgaattggc 23194934  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 186 - 227
Target Start/End: Complemental strand, 16362576 - 16362535
Alignment:
Q  186 cctgtttcgtgttcttgcgtcttttacacacgtttctgtttt 227  Q
    |||||||| |||||||||||||||| |||||||||| |||||    
T  16362576 cctgtttcatgttcttgcgtctttttcacacgtttccgtttt 16362535  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #48
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 190 - 235
Target Start/End: Original strand, 24720032 - 24720077
Alignment:
Q  190 tttcgtgttcttgcgtcttttacacacgtttctgttttgaattggc 235  Q
    |||| |||||||||||||||| ||||||||| | ||||||||||||    
T  24720032 tttcatgttcttgcgtctttttcacacgtttttcttttgaattggc 24720077  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0672 (Bit Score: 175; Significance: 2e-94; HSPs: 1)
Name: scaffold0672
Description:

Target: scaffold0672; HSP #1
Raw Score: 175; E-Value: 2e-94
Query Start/End: Original strand, 3 - 233
Target Start/End: Original strand, 7707 - 7937
Alignment:
Q  3 ggtgaaaaactgcagaattcacgtagtctggtctgtcgcgattcgccatggcggagagatatttcgcctggcggatatattcaccatttcctcgccagta 102  Q
    ||||||||| ||||||||||||||| ||||||||||||||||||||||||||||| |||||||||||||||  ||||| ||| ||||||||||| |||||    
T  7707 ggtgaaaaattgcagaattcacgtactctggtctgtcgcgattcgccatggcggatagatatttcgcctggttgatattttcgccatttcctcgtcagta 7806  T
Q  103 gttcgcctggcgaaacatcatagtagccactcgccttgagctcgccattaattcgccttgcgaaatgttcagtggcagactgccctgtttcgtgttcttg 202  Q
    ||||||||||| |||||||| ||||||||||||||||||||||||||||| ||||||| |||||||||||||||| ||||||||||||||||||||||||    
T  7807 gttcgcctggcaaaacatcacagtagccactcgccttgagctcgccattagttcgcctggcgaaatgttcagtggtagactgccctgtttcgtgttcttg 7906  T
Q  203 cgtcttttacacacgtttctgttttgaattg 233  Q
    ||||||||| |||||||||||||||||||||    
T  7907 cgtcttttagacacgtttctgttttgaattg 7937  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 174; Significance: 9e-94; HSPs: 60)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 174; E-Value: 9e-94
Query Start/End: Original strand, 3 - 235
Target Start/End: Complemental strand, 14049419 - 14049186
Alignment:
Q  3 ggtgaaaaactgcagaattcacgtagtctggtctgtcgcgattcgccatggcggagagatatttcgcctggcggatatattcaccattt-cctcgccagt 101  Q
    ||||||||||| |||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||| || ||  |||||| ||||||||||    
T  14049419 ggtgaaaaactacagaattcacgtagtctggtttgtcgcgattcgccatggcggagagatatttcgcctggcggaaatttttgccattttcctcgccagt 14049320  T
Q  102 agttcgcctggcgaaacatcatagtagccactcgccttgagctcgccattaattcgccttgcgaaatgttcagtggcagactgccctgtttcgtgttctt 201  Q
    ||||||||||||||||||||| ||||||||||| ||||||||||||||||| ||||||| |||||||||||||||||||||| ||||||||| |||||||    
T  14049319 agttcgcctggcgaaacatcacagtagccactcaccttgagctcgccattagttcgcctggcgaaatgttcagtggcagacttccctgtttcatgttctt 14049220  T
Q  202 gcgtcttttacacacgtttctgttttgaattggc 235  Q
    ||||| ||||||||||||||||||||||||||||    
T  14049219 gcgtcgtttacacacgtttctgttttgaattggc 14049186  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 165; E-Value: 2e-88
Query Start/End: Original strand, 3 - 235
Target Start/End: Complemental strand, 30147756 - 30147524
Alignment:
Q  3 ggtgaaaaactgcagaattcacgtagtctggtctgtcgcgattcgccatggcggagagatatttcgcctggcggatatattcaccatttcctcgccagta 102  Q
    ||||||||| |||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||| ||| |||||| ||||||| ||    
T  30147756 ggtgaaaaattgcagaattcacgtagtctggtatgtcgcgattcgccatggcggagagatatttcgcctggcggatattttcgccatttactcgccatta 30147657  T
Q  103 gttcgcctggcgaaacatcatagtagccactcgccttgagctcgccattaattcgccttgcgaaatgttcagtggcagactgccctgtttcgtgttcttg 202  Q
    |||  |||||| ||| |||| |||||| |||||||||||||||||||||| ||||||| |||||||||||||||||||||| |||||||||| |||||||    
T  30147656 gttttcctggcaaaaaatcacagtagctactcgccttgagctcgccattagttcgcctggcgaaatgttcagtggcagactaccctgtttcgcgttcttg 30147557  T
Q  203 cgtcttttacacacgtttctgttttgaattggc 235  Q
    |||||||| ||||||||||||||||||||||||    
T  30147556 cgtctttttcacacgtttctgttttgaattggc 30147524  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 74; E-Value: 4e-34
Query Start/End: Original strand, 3 - 135
Target Start/End: Complemental strand, 14035558 - 14035415
Alignment:
Q  3 ggtgaaaaactgcagaattcacgtagtctggtctgtcgcgattcgccatggcggagagatatttcgcctggcggat-----------atattcaccattt 91  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| | |||||||            | ||| |||||     
T  14035558 ggtgaaaaactgcagaattcacgtagtctggtctgtcgcgattcgccatggcggagagatatttcgtccggcggatcattccagtagcttttcgccattg 14035459  T
Q  92 cctcgccagtagttcgcctggcgaaacatcatagtagccactcg 135  Q
    |||||||||||||||| |||||||||||||| ||||||||||||    
T  14035458 cctcgccagtagttcgtctggcgaaacatcacagtagccactcg 14035415  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 154 - 234
Target Start/End: Complemental strand, 10273104 - 10273024
Alignment:
Q  154 ttcgccttgcgaaatgttcagtggcagactgccctgtttcgtgttcttgcgtcttttacacacgtttctgttttgaattgg 234  Q
    ||||||| ||||||||||||||||||||||||||| |||||  ||||||||||| ||  ||||||||||||||||| ||||    
T  10273104 ttcgcctggcgaaatgttcagtggcagactgccctatttcgcattcttgcgtctgtttaacacgtttctgttttgagttgg 10273024  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 186 - 235
Target Start/End: Complemental strand, 33849460 - 33849411
Alignment:
Q  186 cctgtttcgtgttcttgcgtcttttacacacgtttctgttttgaattggc 235  Q
    ||||||||||||||||||||||||| ||||||||||||||||||||||||    
T  33849460 cctgtttcgtgttcttgcgtctttttcacacgtttctgttttgaattggc 33849411  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 154 - 235
Target Start/End: Complemental strand, 55582940 - 55582860
Alignment:
Q  154 ttcgccttgcgaaatgttcagtggcagactgccctgtttcgtgttcttgcgtcttttacacacgtttctgttttgaattggc 235  Q
    ||||||| |||||| |||||||||| |||  ||||||||||||||||||||||| || | ||||||||||||||||||||||    
T  55582940 ttcgcctggcgaaa-gttcagtggctgacgaccctgtttcgtgttcttgcgtctgtttcgcacgtttctgttttgaattggc 55582860  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 168 - 235
Target Start/End: Complemental strand, 9621926 - 9621859
Alignment:
Q  168 tgttcagtggcagactgccctgtttcgtgttcttgcgtcttttacacacgtttctgttttgaattggc 235  Q
    ||||||||||||| |||||||||||||||||||||||||| || | ||||||||| |||||| |||||    
T  9621926 tgttcagtggcagtctgccctgtttcgtgttcttgcgtctgtttcgcacgtttctattttgagttggc 9621859  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 155 - 226
Target Start/End: Complemental strand, 14477088 - 14477017
Alignment:
Q  155 tcgccttgcgaaatgttcagtggcagactgccctgtttcgtgttcttgcgtcttttacacacgtttctgttt 226  Q
    |||||| ||||| |||||||| |||| ||||||||||||| |||||||||||| || |||||||||||||||    
T  14477088 tcgcctcgcgaattgttcagtagcagcctgccctgtttcgcgttcttgcgtctgtttcacacgtttctgttt 14477017  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 186 - 235
Target Start/End: Original strand, 2424955 - 2425004
Alignment:
Q  186 cctgtttcgtgttcttgcgtcttttacacacgtttctgttttgaattggc 235  Q
    |||||||| |||||||||||||||| ||||||||||||||||||||||||    
T  2424955 cctgtttcatgttcttgcgtctttttcacacgtttctgttttgaattggc 2425004  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 186 - 235
Target Start/End: Original strand, 15011847 - 15011896
Alignment:
Q  186 cctgtttcgtgttcttgcgtcttttacacacgtttctgttttgaattggc 235  Q
    |||||||| |||||||||||||||| ||||||||||||||||||||||||    
T  15011847 cctgtttcatgttcttgcgtctttttcacacgtttctgttttgaattggc 15011896  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 186 - 235
Target Start/End: Complemental strand, 25091371 - 25091322
Alignment:
Q  186 cctgtttcgtgttcttgcgtcttttacacacgtttctgttttgaattggc 235  Q
    |||||||| |||||||||||||||| ||||||||||||||||||||||||    
T  25091371 cctgtttcatgttcttgcgtctttttcacacgtttctgttttgaattggc 25091322  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 186 - 235
Target Start/End: Complemental strand, 46740916 - 46740867
Alignment:
Q  186 cctgtttcgtgttcttgcgtcttttacacacgtttctgttttgaattggc 235  Q
    |||||||| |||||||||||||||| ||||||||||||||||||||||||    
T  46740916 cctgtttcatgttcttgcgtctttttcacacgtttctgttttgaattggc 46740867  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 187 - 235
Target Start/End: Complemental strand, 16998242 - 16998194
Alignment:
Q  187 ctgtttcgtgttcttgcgtcttttacacacgtttctgttttgaattggc 235  Q
    ||||||| |||||||||||||||| ||||||||||||||||||||||||    
T  16998242 ctgtttcatgttcttgcgtctttttcacacgtttctgttttgaattggc 16998194  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 186 - 233
Target Start/End: Original strand, 44023938 - 44023985
Alignment:
Q  186 cctgtttcgtgttcttgcgtcttttacacacgtttctgttttgaattg 233  Q
    |||||||| |||||||||||||||| ||||||||||||||||||||||    
T  44023938 cctgtttcatgttcttgcgtctttttcacacgtttctgttttgaattg 44023985  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 186 - 232
Target Start/End: Original strand, 15117857 - 15117903
Alignment:
Q  186 cctgtttcgtgttcttgcgtcttttacacacgtttctgttttgaatt 232  Q
    |||||||| |||||||||||||||| |||||||||||||||||||||    
T  15117857 cctgtttcatgttcttgcgtctttttcacacgtttctgttttgaatt 15117903  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 186 - 232
Target Start/End: Original strand, 18239117 - 18239163
Alignment:
Q  186 cctgtttcgtgttcttgcgtcttttacacacgtttctgttttgaatt 232  Q
    |||||||| |||||||||||||||| |||||||||||||||||||||    
T  18239117 cctgtttcatgttcttgcgtctttttcacacgtttctgttttgaatt 18239163  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 186 - 232
Target Start/End: Original strand, 44772588 - 44772634
Alignment:
Q  186 cctgtttcgtgttcttgcgtcttttacacacgtttctgttttgaatt 232  Q
    |||||||| |||||||||||||||| |||||||||||||||||||||    
T  44772588 cctgtttcatgttcttgcgtctttttcacacgtttctgttttgaatt 44772634  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 190 - 235
Target Start/End: Original strand, 12424632 - 12424677
Alignment:
Q  190 tttcgtgttcttgcgtcttttacacacgtttctgttttgaattggc 235  Q
    |||| |||||||||||||||| ||||||||||||||||||||||||    
T  12424632 tttcatgttcttgcgtctttttcacacgtttctgttttgaattggc 12424677  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 186 - 235
Target Start/End: Complemental strand, 14630544 - 14630495
Alignment:
Q  186 cctgtttcgtgttcttgcgtcttttacacacgtttctgttttgaattggc 235  Q
    |||||||| |||||||||||||||| |||||||||||||||||| |||||    
T  14630544 cctgtttcatgttcttgcgtctttttcacacgtttctgttttgatttggc 14630495  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 185 - 234
Target Start/End: Complemental strand, 15008685 - 15008636
Alignment:
Q  185 ccctgtttcgtgttcttgcgtcttttacacacgtttctgttttgaattgg 234  Q
    |||||||||| ||||||||||||||| ||||||||| |||||||||||||    
T  15008685 ccctgtttcgcgttcttgcgtctttttcacacgtttatgttttgaattgg 15008636  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 186 - 235
Target Start/End: Original strand, 16026263 - 16026312
Alignment:
Q  186 cctgtttcgtgttcttgcgtcttttacacacgtttctgttttgaattggc 235  Q
    |||||||| |||||||||||||||| ||||||||| ||||||||||||||    
T  16026263 cctgtttcatgttcttgcgtctttttcacacgtttatgttttgaattggc 16026312  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 190 - 235
Target Start/End: Complemental strand, 28385957 - 28385912
Alignment:
Q  190 tttcgtgttcttgcgtcttttacacacgtttctgttttgaattggc 235  Q
    ||||| ||||||||||||||| ||||||||||||||||||||||||    
T  28385957 tttcgcgttcttgcgtctttttcacacgtttctgttttgaattggc 28385912  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 190 - 235
Target Start/End: Original strand, 49547282 - 49547327
Alignment:
Q  190 tttcgtgttcttgcgtcttttacacacgtttctgttttgaattggc 235  Q
    ||||| ||||||||||||||| ||||||||||||||||||||||||    
T  49547282 tttcgcgttcttgcgtctttttcacacgtttctgttttgaattggc 49547327  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 188 - 233
Target Start/End: Original strand, 53630809 - 53630854
Alignment:
Q  188 tgtttcgtgttcttgcgtcttttacacacgtttctgttttgaattg 233  Q
    |||||| |||||||||||||||| ||||||||||||||||||||||    
T  53630809 tgtttcatgttcttgcgtctttttcacacgtttctgttttgaattg 53630854  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 188 - 232
Target Start/End: Original strand, 1837026 - 1837070
Alignment:
Q  188 tgtttcgtgttcttgcgtcttttacacacgtttctgttttgaatt 232  Q
    |||||| |||||||||||||||| |||||||||||||||||||||    
T  1837026 tgtttcatgttcttgcgtctttttcacacgtttctgttttgaatt 1837070  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 187 - 235
Target Start/End: Complemental strand, 26445601 - 26445553
Alignment:
Q  187 ctgtttcgtgttcttgcgtcttttacacacgtttctgttttgaattggc 235  Q
    |||||||  ||||||||||||||| ||||||||||||||||||||||||    
T  26445601 ctgtttcacgttcttgcgtctttttcacacgtttctgttttgaattggc 26445553  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 195 - 235
Target Start/End: Complemental strand, 35660555 - 35660515
Alignment:
Q  195 tgttcttgcgtcttttacacacgtttctgttttgaattggc 235  Q
    |||||||||||||||| ||||||||||||||||||||||||    
T  35660555 tgttcttgcgtctttttcacacgtttctgttttgaattggc 35660515  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 186 - 234
Target Start/End: Complemental strand, 36038528 - 36038480
Alignment:
Q  186 cctgtttcgtgttcttgcgtcttttacacacgtttctgttttgaattgg 234  Q
    ||||||||| ||||||||||||||| |||| ||||||||||||||||||    
T  36038528 cctgtttcgcgttcttgcgtctttttcacatgtttctgttttgaattgg 36038480  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 195 - 235
Target Start/End: Complemental strand, 37019378 - 37019338
Alignment:
Q  195 tgttcttgcgtcttttacacacgtttctgttttgaattggc 235  Q
    |||||||||||||||| ||||||||||||||||||||||||    
T  37019378 tgttcttgcgtctttttcacacgtttctgttttgaattggc 37019338  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 195 - 235
Target Start/End: Complemental strand, 42875507 - 42875467
Alignment:
Q  195 tgttcttgcgtcttttacacacgtttctgttttgaattggc 235  Q
    |||||||||||||||| ||||||||||||||||||||||||    
T  42875507 tgttcttgcgtctttttcacacgtttctgttttgaattggc 42875467  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 188 - 235
Target Start/End: Original strand, 10356772 - 10356819
Alignment:
Q  188 tgtttcgtgttcttgcgtcttttacacacgtttctgttttgaattggc 235  Q
    |||||| |||||||||||||||| ||||||||||||| ||||||||||    
T  10356772 tgtttcatgttcttgcgtctttttcacacgtttctgtattgaattggc 10356819  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 188 - 235
Target Start/End: Complemental strand, 11425661 - 11425614
Alignment:
Q  188 tgtttcgtgttcttgcgtcttttacacacgtttctgttttgaattggc 235  Q
    |||||| |||||||||||||||| |||||||||||||||| |||||||    
T  11425661 tgtttcatgttcttgcgtctttttcacacgtttctgttttaaattggc 11425614  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 186 - 233
Target Start/End: Complemental strand, 19610042 - 19609995
Alignment:
Q  186 cctgtttcgtgttcttgcgtcttttacacacgtttctgttttgaattg 233  Q
    |||||||| |||||||||||||||| ||||| ||||||||||||||||    
T  19610042 cctgtttcatgttcttgcgtctttttcacacatttctgttttgaattg 19609995  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 187 - 230
Target Start/End: Original strand, 50221845 - 50221888
Alignment:
Q  187 ctgtttcgtgttcttgcgtcttttacacacgtttctgttttgaa 230  Q
    ||||||| |||||||||||||||| |||||||||||||||||||    
T  50221845 ctgtttcatgttcttgcgtctttttcacacgtttctgttttgaa 50221888  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 185 - 235
Target Start/End: Original strand, 630236 - 630286
Alignment:
Q  185 ccctgtttcgtgttcttgcgtcttttacacacgtttctgttttgaattggc 235  Q
    ||||||||  |||||||||||||||| ||||| ||||||||||||||||||    
T  630236 ccctgttttatgttcttgcgtctttttcacacatttctgttttgaattggc 630286  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 186 - 232
Target Start/End: Original strand, 7640691 - 7640737
Alignment:
Q  186 cctgtttcgtgttcttgcgtcttttacacacgtttctgttttgaatt 232  Q
    |||||||| |||||||||||||||| |||||||||| ||||||||||    
T  7640691 cctgtttcatgttcttgcgtctttttcacacgtttcagttttgaatt 7640737  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 185 - 235
Target Start/End: Complemental strand, 9638726 - 9638676
Alignment:
Q  185 ccctgtttcgtgttcttgcgtcttttacacacgtttctgttttgaattggc 235  Q
    |||| ||||| ||||||||||||||| ||||||||| ||||||||||||||    
T  9638726 ccctatttcgcgttcttgcgtctttttcacacgtttatgttttgaattggc 9638676  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 185 - 235
Target Start/End: Original strand, 10694580 - 10694630
Alignment:
Q  185 ccctgtttcgtgttcttgcgtcttttacacacgtttctgttttgaattggc 235  Q
    |||||||||| |||||||||||||||  |||| ||||||||||||||||||    
T  10694580 ccctgtttcgcgttcttgcgtctttttgacacatttctgttttgaattggc 10694630  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 185 - 235
Target Start/End: Original strand, 10908346 - 10908396
Alignment:
Q  185 ccctgtttcgtgttcttgcgtcttttacacacgtttctgttttgaattggc 235  Q
    |||||||||| |||||||||||||||  |||| ||||||||||||||||||    
T  10908346 ccctgtttcgcgttcttgcgtctttttgacacatttctgttttgaattggc 10908396  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 186 - 235
Target Start/End: Complemental strand, 12623030 - 12622981
Alignment:
Q  186 cctgtttcgtgttcttgcgtcttttacacacgtttctgttttgaattggc 235  Q
    |||||||| | |||||||||||||| ||||| ||||||||||||||||||    
T  12623030 cctgtttcatattcttgcgtctttttcacacatttctgttttgaattggc 12622981  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 186 - 235
Target Start/End: Complemental strand, 15114940 - 15114891
Alignment:
Q  186 cctgtttcgtgttcttgcgtcttttacacacgtttctgttttgaattggc 235  Q
    |||||||| ||||||||| |||||| || |||||||||||||||||||||    
T  15114940 cctgtttcatgttcttgcttctttttcatacgtttctgttttgaattggc 15114891  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 190 - 235
Target Start/End: Complemental strand, 16731824 - 16731779
Alignment:
Q  190 tttcgtgttcttgcgtcttttacacacgtttctgttttgaattggc 235  Q
    ||||| ||||||| ||||||| ||||||||||||||||||||||||    
T  16731824 tttcgcgttcttgtgtctttttcacacgtttctgttttgaattggc 16731779  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 186 - 234
Target Start/End: Complemental strand, 15534839 - 15534791
Alignment:
Q  186 cctgtttcgtgttcttgcgtcttttacacacgtttctgttttgaattgg 234  Q
    ||||||||| |||||| |||||||| |||| ||||||||||||||||||    
T  15534839 cctgtttcgcgttcttccgtctttttcacatgtttctgttttgaattgg 15534791  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 185 - 233
Target Start/End: Original strand, 24046867 - 24046915
Alignment:
Q  185 ccctgtttcgtgttcttgcgtcttttacacacgtttctgttttgaattg 233  Q
    |||||||||||||||||| |||||||  ||| |||||||||||||||||    
T  24046867 ccctgtttcgtgttcttgtgtcttttttacatgtttctgttttgaattg 24046915  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 190 - 234
Target Start/End: Complemental strand, 47357331 - 47357287
Alignment:
Q  190 tttcgtgttcttgcgtcttttacacacgtttctgttttgaattgg 234  Q
    ||||| ||||||| ||||||| |||||||||||||||||||||||    
T  47357331 tttcgcgttcttgtgtctttttcacacgtttctgttttgaattgg 47357287  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 200 - 235
Target Start/End: Original strand, 19435045 - 19435080
Alignment:
Q  200 ttgcgtcttttacacacgtttctgttttgaattggc 235  Q
    ||||||||||| ||||||||||||||||||||||||    
T  19435045 ttgcgtctttttcacacgtttctgttttgaattggc 19435080  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 190 - 232
Target Start/End: Complemental strand, 3485622 - 3485580
Alignment:
Q  190 tttcgtgttcttgcgtcttttacacacgtttctgttttgaatt 232  Q
    |||| |||||||||||||||| ||||| |||||||||||||||    
T  3485622 tttcatgttcttgcgtctttttcacacatttctgttttgaatt 3485580  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 185 - 235
Target Start/End: Complemental strand, 14549345 - 14549295
Alignment:
Q  185 ccctgtttcgtgttcttgcgtcttttacacacgtttctgttttgaattggc 235  Q
    ||||||||  |||||||||||||||| |||| | |||||||||||||||||    
T  14549345 ccctgttttatgttcttgcgtctttttcacatgcttctgttttgaattggc 14549295  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 185 - 235
Target Start/End: Complemental strand, 14995797 - 14995747
Alignment:
Q  185 ccctgtttcgtgttcttgcgtcttttacacacgtttctgttttgaattggc 235  Q
    |||||||||| ||||||||||||||| |||   ||||||||||||||||||    
T  14995797 ccctgtttcgcgttcttgcgtctttttcacctttttctgttttgaattggc 14995747  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 196 - 234
Target Start/End: Complemental strand, 18213274 - 18213236
Alignment:
Q  196 gttcttgcgtcttttacacacgtttctgttttgaattgg 234  Q
    ||||||| ||||||| |||||||||||||||||||||||    
T  18213274 gttcttgtgtctttttcacacgtttctgttttgaattgg 18213236  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 185 - 235
Target Start/End: Original strand, 19697929 - 19697979
Alignment:
Q  185 ccctgtttcgtgttcttgcgtcttttacacacgtttctgttttgaattggc 235  Q
    |||||||||||||||||||||||||| |||   ||||| ||||||||||||    
T  19697929 ccctgtttcgtgttcttgcgtctttttcacctatttctattttgaattggc 19697979  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #52
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 185 - 235
Target Start/End: Original strand, 19708514 - 19708564
Alignment:
Q  185 ccctgtttcgtgttcttgcgtcttttacacacgtttctgttttgaattggc 235  Q
    |||||||||||||||||||||||||| |||   ||||| ||||||||||||    
T  19708514 ccctgtttcgtgttcttgcgtctttttcacctatttctattttgaattggc 19708564  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #53
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 185 - 235
Target Start/End: Complemental strand, 40620249 - 40620199
Alignment:
Q  185 ccctgtttcgtgttcttgcgtcttttacacacgtttctgttttgaattggc 235  Q
    |||||||||| |||||||| |||||| ||||||||||| |||| |||||||    
T  40620249 ccctgtttcgcgttcttgcatctttttcacacgtttctattttaaattggc 40620199  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #54
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 185 - 234
Target Start/End: Complemental strand, 18247892 - 18247843
Alignment:
Q  185 ccctgtttcgtgttcttgcgtcttttacacacgtttctgttttgaattgg 234  Q
    |||||||||| ||||||||||||||| |||   |||||||||||||||||    
T  18247892 ccctgtttcgcgttcttgcgtctttttcacctatttctgttttgaattgg 18247843  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #55
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 190 - 235
Target Start/End: Original strand, 33243634 - 33243679
Alignment:
Q  190 tttcgtgttcttgcgtcttttacacacgtttctgttttgaattggc 235  Q
    |||| ||||||||| |||||| ||||| ||||||||||||||||||    
T  33243634 tttcatgttcttgcatctttttcacacatttctgttttgaattggc 33243679  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #56
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 186 - 230
Target Start/End: Complemental strand, 9923914 - 9923870
Alignment:
Q  186 cctgtttcgtgttcttgcgtcttttacacacgtttctgttttgaa 230  Q
    |||||||| |||||||||||||||| ||||||||||  |||||||    
T  9923914 cctgtttcatgttcttgcgtctttttcacacgtttccattttgaa 9923870  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #57
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 187 - 235
Target Start/End: Original strand, 19081676 - 19081724
Alignment:
Q  187 ctgtttcgtgttcttgcgtcttttacacacgtttctgttttgaattggc 235  Q
    ||||||| ||||||||| |||||| ||||| ||||||||||| ||||||    
T  19081676 ctgtttcatgttcttgcatctttttcacacatttctgttttggattggc 19081724  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #58
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 188 - 232
Target Start/End: Original strand, 19566255 - 19566299
Alignment:
Q  188 tgtttcgtgttcttgcgtcttttacacacgtttctgttttgaatt 232  Q
    |||||| ||||||||| |||||| |||| ||||||||||||||||    
T  19566255 tgtttcatgttcttgcatctttttcacatgtttctgttttgaatt 19566299  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #59
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 186 - 230
Target Start/End: Complemental strand, 33186619 - 33186575
Alignment:
Q  186 cctgtttcgtgttcttgcgtcttttacacacgtttctgttttgaa 230  Q
    |||||||| ||||||||||||| || |||||||||| ||||||||    
T  33186619 cctgtttcatgttcttgcgtctgtttcacacgtttccgttttgaa 33186575  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #60
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 185 - 233
Target Start/End: Original strand, 56115169 - 56115217
Alignment:
Q  185 ccctgtttcgtgttcttgcgtcttttacacacgtttctgttttgaattg 233  Q
    ||||||||| ||||||||| | |||| | ||||||||||||||||||||    
T  56115169 ccctgtttcatgttcttgcatttttttcgcacgtttctgttttgaattg 56115217  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0064 (Bit Score: 162; Significance: 1e-86; HSPs: 2)
Name: scaffold0064
Description:

Target: scaffold0064; HSP #1
Raw Score: 162; E-Value: 1e-86
Query Start/End: Original strand, 3 - 232
Target Start/End: Complemental strand, 68802 - 68573
Alignment:
Q  3 ggtgaaaaactgcagaattcacgtagtctggtctgtcgcgattcgccatggcggagagatatttcgcctggcggatatattcaccatttcctcgccagta 102  Q
    ||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||  |||||| ||||||  ||    
T  68802 ggtgaaaaattgcagaattcacgtagtctggtctgtcgcgattcgccatggcggagagatatttcgcctggcggatatttttgccatttactcgccctta 68703  T
Q  103 gttcgcctggcgaaacatcatagtagccactcgccttgagctcgccattaattcgccttgcgaaatgttcagtggcagactgccctgtttcgtgttcttg 202  Q
    |||||||||||||||||||| |||||| |||||||||||||||||||||| ||||||| |||||||||||||||||||||| |||| ||||| |||||||    
T  68702 gttcgcctggcgaaacatcacagtagctactcgccttgagctcgccattagttcgcctggcgaaatgttcagtggcagactaccctatttcgcgttcttg 68603  T
Q  203 cgtcttttacacacgtttctgttttgaatt 232  Q
    | |||| | |||||||||||||||||||||    
T  68602 catcttcttcacacgtttctgttttgaatt 68573  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0064; HSP #2
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 186 - 235
Target Start/End: Complemental strand, 58466 - 58417
Alignment:
Q  186 cctgtttcgtgttcttgcgtcttttacacacgtttctgttttgaattggc 235  Q
    |||||||| | ||||||||| |||| ||||||||||||||||||||||||    
T  58466 cctgtttcatattcttgcgtgtttttcacacgtttctgttttgaattggc 58417  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 162; Significance: 1e-86; HSPs: 57)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 162; E-Value: 1e-86
Query Start/End: Original strand, 3 - 235
Target Start/End: Complemental strand, 6766573 - 6766330
Alignment:
Q  3 ggtgaaaaactgcagaattcacgtagtctggtctgtcgcgattcgccatggcggagagatatttcgcctggcggata-----------tattcaccattt 91  Q
    |||||| ||||||||||||||| ||||||||||||||| ||||||||||||||||||||||||| |||||||||||            | ||| ||||||    
T  6766573 ggtgaacaactgcagaattcacatagtctggtctgtcgtgattcgccatggcggagagatattttgcctggcggatcattccagtagcttttcgccattt 6766474  T
Q  92 cctcgccagtagttcgcctggcgaaacatcatagtagccactcgccttgagctcgccattaattcgccttgcgaaatgttcagtggcagactgccctgtt 191  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| | |||||||||||||||||||| |||||||    
T  6766473 cctcgccagtagttcgcctggcgaaacatcatagtagccactcgccttgagctcgccattagttcgcctggggaaatgttcagtggcagacttccctgtt 6766374  T
Q  192 tcgtgttcttgcgtcttttacacacgtttctgttttgaattggc 235  Q
    ||||||||||||||||||||||||||||||||||||||||||||    
T  6766373 tcgtgttcttgcgtcttttacacacgtttctgttttgaattggc 6766330  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 126; E-Value: 4e-65
Query Start/End: Original strand, 3 - 233
Target Start/End: Complemental strand, 17813297 - 17813067
Alignment:
Q  3 ggtgaaaaactgcagaattcacgtagtctggtctgtcgcgattcgccatggcggagagatatttcgcctggcggat-----------atattcaccattt 91  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||            | ||  ||||||    
T  17813297 ggtgaaaaactgcagaattcacgtagtctggtctgtcgcgattcgccatggcggagagatatttcgcctggcggatcattccagtagctttttgccattt 17813198  T
Q  92 cctcgccagtagttcgcctggcgaaacatcatagtagccactcgccttgagctcgccattaattcgccttgcgaaatgttcagtggcagactgccctgtt 191  Q
    ||||||||||||||||||||||||||||||| ||||||||           |||||||||  ||||||| |||||||||| |||||||||||||||||||    
T  17813197 cctcgccagtagttcgcctggcgaaacatcacagtagcca-----------ctcgccatttgttcgcctggcgaaatgttgagtggcagactgccctgtt 17813109  T
Q  192 tcgtgttcttgcgtcttttacacacgtttctgttttgaattg 233  Q
    |||||||||||||||||||||||||||||||||||| |||||    
T  17813108 tcgtgttcttgcgtcttttacacacgtttctgttttaaattg 17813067  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 3 - 78
Target Start/End: Original strand, 24276735 - 24276810
Alignment:
Q  3 ggtgaaaaactgcagaattcacgtagtctggtctgtcgcgattcgccatggcggagagatatttcgcctggcggat 78  Q
    |||||||||||| |||||||||||||||||||||||||||| |||||||||||||||| | |||||||||||||||    
T  24276735 ggtgaaaaactgtagaattcacgtagtctggtctgtcgcgactcgccatggcggagagctttttcgcctggcggat 24276810  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 154 - 233
Target Start/End: Original strand, 24276908 - 24276987
Alignment:
Q  154 ttcgccttgcgaaatgttcagtggcagactgccctgtttcgtgttcttgcgtcttttacacacgtttctgttttgaattg 233  Q
    ||||||| ||||||||||||||| |||| | |||||||||||||||||||||||||| ||||||||||||||||||||||    
T  24276908 ttcgcctggcgaaatgttcagtgtcagatttccctgtttcgtgttcttgcgtctttttcacacgtttctgttttgaattg 24276987  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 154 - 233
Target Start/End: Complemental strand, 24385305 - 24385226
Alignment:
Q  154 ttcgccttgcgaaatgttcagtggcagactgccctgtttcgtgttcttgcgtcttttacacacgtttctgttttgaattg 233  Q
    ||||||| ||||||||||||||| |||| | |||||||||||||||||||||||||| ||||||||||||||||||||||    
T  24385305 ttcgcctggcgaaatgttcagtgtcagatttccctgtttcgtgttcttgcgtctttttcacacgtttctgttttgaattg 24385226  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 3 - 78
Target Start/End: Complemental strand, 24385478 - 24385403
Alignment:
Q  3 ggtgaaaaactgcagaattcacgtagtctggtctgtcgcgattcgccatggcggagagatatttcgcctggcggat 78  Q
    |||||||||||| |||||||||||||||||||||||||||| |||||||||||||||| | |||||||||||||||    
T  24385478 ggtgaaaaactgtagaattcacgtagtctggtctgtcgcgactcgccatggcggagagctttttcgcctggcggat 24385403  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 162 - 234
Target Start/End: Complemental strand, 20312696 - 20312624
Alignment:
Q  162 gcgaaatgttcagtggcagactgccctgtttcgtgttcttgcgtcttttacacacgtttctgttttgaattgg 234  Q
    ||||| ||||||||||||||||||| ||||||| |||| ||||||| || |||||||||||||||||| ||||    
T  20312696 gcgaattgttcagtggcagactgccttgtttcgcgttcgtgcgtctgtttcacacgtttctgttttgagttgg 20312624  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 172 - 235
Target Start/End: Original strand, 16604924 - 16604987
Alignment:
Q  172 cagtggcagactgccctgtttcgtgttcttgcgtcttttacacacgtttctgttttgaattggc 235  Q
    |||||||||  | ||||||||| |||||||||||||||| ||||||||||||||||||||||||    
T  16604924 cagtggcagcataccctgtttcatgttcttgcgtctttttcacacgtttctgttttgaattggc 16604987  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 185 - 235
Target Start/End: Complemental strand, 17011445 - 17011395
Alignment:
Q  185 ccctgtttcgtgttcttgcgtcttttacacacgtttctgttttgaattggc 235  Q
    ||||||||| |||||||||||||||| ||||||||||||||||||||||||    
T  17011445 ccctgtttcatgttcttgcgtctttttcacacgtttctgttttgaattggc 17011395  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 185 - 235
Target Start/End: Complemental strand, 29448557 - 29448507
Alignment:
Q  185 ccctgtttcgtgttcttgcgtcttttacacacgtttctgttttgaattggc 235  Q
    |||||||||| ||||||||||||||| ||||||||||||||||||||||||    
T  29448557 ccctgtttcgcgttcttgcgtctttttcacacgtttctgttttgaattggc 29448507  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 185 - 235
Target Start/End: Original strand, 36509117 - 36509167
Alignment:
Q  185 ccctgtttcgtgttcttgcgtcttttacacacgtttctgttttgaattggc 235  Q
    ||||||||| |||||||||||||||| ||||||||||||||||||||||||    
T  36509117 ccctgtttcatgttcttgcgtctttttcacacgtttctgttttgaattggc 36509167  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 186 - 235
Target Start/End: Original strand, 8833541 - 8833590
Alignment:
Q  186 cctgtttcgtgttcttgcgtcttttacacacgtttctgttttgaattggc 235  Q
    |||||||| |||||||||||||||| ||||||||||||||||||||||||    
T  8833541 cctgtttcatgttcttgcgtctttttcacacgtttctgttttgaattggc 8833590  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 186 - 235
Target Start/End: Complemental strand, 18744367 - 18744318
Alignment:
Q  186 cctgtttcgtgttcttgcgtcttttacacacgtttctgttttgaattggc 235  Q
    |||||||| |||||||||||||||| ||||||||||||||||||||||||    
T  18744367 cctgtttcatgttcttgcgtctttttcacacgtttctgttttgaattggc 18744318  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 186 - 235
Target Start/End: Complemental strand, 26749749 - 26749700
Alignment:
Q  186 cctgtttcgtgttcttgcgtcttttacacacgtttctgttttgaattggc 235  Q
    |||||||| |||||||||||||||| ||||||||||||||||||||||||    
T  26749749 cctgtttcatgttcttgcgtctttttcacacgtttctgttttgaattggc 26749700  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 187 - 235
Target Start/End: Original strand, 41875928 - 41875976
Alignment:
Q  187 ctgtttcgtgttcttgcgtcttttacacacgtttctgttttgaattggc 235  Q
    |||||||| ||||||||||||||| ||||||||||||||||||||||||    
T  41875928 ctgtttcgcgttcttgcgtctttttcacacgtttctgttttgaattggc 41875976  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 186 - 232
Target Start/End: Original strand, 264273 - 264319
Alignment:
Q  186 cctgtttcgtgttcttgcgtcttttacacacgtttctgttttgaatt 232  Q
    |||||||| |||||||||||||||| |||||||||||||||||||||    
T  264273 cctgtttcatgttcttgcgtctttttcacacgtttctgttttgaatt 264319  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 185 - 235
Target Start/End: Original strand, 1627714 - 1627764
Alignment:
Q  185 ccctgtttcgtgttcttgcgtcttttacacacgtttctgttttgaattggc 235  Q
    |||||||||| ||||||||||||||| ||||| ||||||||||||||||||    
T  1627714 ccctgtttcgcgttcttgcgtctttttcacacatttctgttttgaattggc 1627764  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 186 - 232
Target Start/End: Complemental strand, 20909669 - 20909623
Alignment:
Q  186 cctgtttcgtgttcttgcgtcttttacacacgtttctgttttgaatt 232  Q
    |||||||| |||||||||||||||| |||||||||||||||||||||    
T  20909669 cctgtttcatgttcttgcgtctttttcacacgtttctgttttgaatt 20909623  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 185 - 235
Target Start/End: Original strand, 22758223 - 22758273
Alignment:
Q  185 ccctgtttcgtgttcttgcgtcttttacacacgtttctgttttgaattggc 235  Q
    ||||||||| |||||||||||||||| ||||| ||||||||||||||||||    
T  22758223 ccctgtttcatgttcttgcgtctttttcacacatttctgttttgaattggc 22758273  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 186 - 232
Target Start/End: Complemental strand, 29346637 - 29346591
Alignment:
Q  186 cctgtttcgtgttcttgcgtcttttacacacgtttctgttttgaatt 232  Q
    |||||||| |||||||||||||||| |||||||||||||||||||||    
T  29346637 cctgtttcatgttcttgcgtcttttccacacgtttctgttttgaatt 29346591  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 186 - 232
Target Start/End: Complemental strand, 29349110 - 29349064
Alignment:
Q  186 cctgtttcgtgttcttgcgtcttttacacacgtttctgttttgaatt 232  Q
    |||||||| |||||||||||||||| |||||||||||||||||||||    
T  29349110 cctgtttcatgttcttgcgtcttttccacacgtttctgttttgaatt 29349064  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 186 - 232
Target Start/End: Complemental strand, 29351583 - 29351537
Alignment:
Q  186 cctgtttcgtgttcttgcgtcttttacacacgtttctgttttgaatt 232  Q
    |||||||| |||||||||||||||| |||||||||||||||||||||    
T  29351583 cctgtttcatgttcttgcgtcttttccacacgtttctgttttgaatt 29351537  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 185 - 235
Target Start/End: Original strand, 33472897 - 33472947
Alignment:
Q  185 ccctgtttcgtgttcttgcgtcttttacacacgtttctgttttgaattggc 235  Q
    |||| ||||| ||||||||||||||| ||||||||||||||||||||||||    
T  33472897 ccctatttcgcgttcttgcgtctttttcacacgtttctgttttgaattggc 33472947  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 186 - 232
Target Start/End: Complemental strand, 39364041 - 39363995
Alignment:
Q  186 cctgtttcgtgttcttgcgtcttttacacacgtttctgttttgaatt 232  Q
    |||||||| |||||||||||||||| |||||||||||||||||||||    
T  39364041 cctgtttcatgttcttgcgtctttttcacacgtttctgttttgaatt 39363995  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 185 - 235
Target Start/End: Original strand, 43242991 - 43243041
Alignment:
Q  185 ccctgtttcgtgttcttgcgtcttttacacacgtttctgttttgaattggc 235  Q
    ||||||||| |||||||||||||||| ||||| ||||||||||||||||||    
T  43242991 ccctgtttcatgttcttgcgtctttttcacacatttctgttttgaattggc 43243041  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 186 - 235
Target Start/End: Original strand, 8504203 - 8504252
Alignment:
Q  186 cctgtttcgtgttcttgcgtcttttacacacgtttctgttttgaattggc 235  Q
    |||||||| |||||||||||||||| |||| |||||||||||||||||||    
T  8504203 cctgtttcatgttcttgcgtctttttcacatgtttctgttttgaattggc 8504252  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 186 - 235
Target Start/End: Complemental strand, 26762119 - 26762070
Alignment:
Q  186 cctgtttcgtgttcttgcgtcttttacacacgtttctgttttgaattggc 235  Q
    |||||||  |||||||||||||||| ||||||||||||||||||||||||    
T  26762119 cctgttttatgttcttgcgtctttttcacacgtttctgttttgaattggc 26762070  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 183 - 235
Target Start/End: Original strand, 32607656 - 32607708
Alignment:
Q  183 tgccctgtttcgtgttcttgcgtcttttacacacgtttctgttttgaattggc 235  Q
    |||| |||||| |||||||||||||||| |||| |||||||||||||||||||    
T  32607656 tgccatgtttcatgttcttgcgtctttttcacatgtttctgttttgaattggc 32607708  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 188 - 232
Target Start/End: Complemental strand, 38620091 - 38620047
Alignment:
Q  188 tgtttcgtgttcttgcgtcttttacacacgtttctgttttgaatt 232  Q
    |||||| |||||||||||||||| |||||||||||||||||||||    
T  38620091 tgtttcatgttcttgcgtctttttcacacgtttctgttttgaatt 38620047  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 185 - 234
Target Start/End: Complemental strand, 263577 - 263527
Alignment:
Q  185 ccctgtttcgtgttcttgcgtc-ttttacacacgtttctgttttgaattgg 234  Q
    |||||||||||||||||||||| |||| ||||||||| |||||||||||||    
T  263577 ccctgtttcgtgttcttgcgtcttttttcacacgtttttgttttgaattgg 263527  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 195 - 233
Target Start/End: Original strand, 21554722 - 21554760
Alignment:
Q  195 tgttcttgcgtcttttacacacgtttctgttttgaattg 233  Q
    |||||||||||||||| ||||||||||||||||||||||    
T  21554722 tgttcttgcgtctttttcacacgtttctgttttgaattg 21554760  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 186 - 232
Target Start/End: Complemental strand, 39245793 - 39245747
Alignment:
Q  186 cctgtttcgtgttcttgcgtcttttacacacgtttctgttttgaatt 232  Q
    |||||||| |||||||||||||||| |||| ||||||||||||||||    
T  39245793 cctgtttcatgttcttgcgtctttttcacatgtttctgttttgaatt 39245747  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 186 - 235
Target Start/End: Original strand, 14026142 - 14026191
Alignment:
Q  186 cctgtttcgtgttcttgcgtcttttacacacgtttctgttttgaattggc 235  Q
    |||||||| |||||||| ||||||| |||| |||||||||||||||||||    
T  14026142 cctgtttcatgttcttgtgtctttttcacatgtttctgttttgaattggc 14026191  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 186 - 235
Target Start/End: Original strand, 27868909 - 27868958
Alignment:
Q  186 cctgtttcgtgttcttgcgtcttttacacacgtttctgttttgaattggc 235  Q
    ||||||||  ||||||||||||||| |||| |||||||||||||||||||    
T  27868909 cctgtttcacgttcttgcgtctttttcacatgtttctgttttgaattggc 27868958  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 190 - 235
Target Start/End: Complemental strand, 42961091 - 42961046
Alignment:
Q  190 tttcgtgttcttgcgtcttttacacacgtttctgttttgaattggc 235  Q
    ||||| ||||||| ||||||| ||||||||||||||||||||||||    
T  42961091 tttcgcgttcttgtgtctttttcacacgtttctgttttgaattggc 42961046  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 190 - 234
Target Start/End: Complemental strand, 12051 - 12007
Alignment:
Q  190 tttcgtgttcttgcgtcttttacacacgtttctgttttgaattgg 234  Q
    ||||| ||||||| ||||||| |||||||||||||||||||||||    
T  12051 tttcgcgttcttgtgtctttttcacacgtttctgttttgaattgg 12007  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 185 - 233
Target Start/End: Complemental strand, 18419131 - 18419083
Alignment:
Q  185 ccctgtttcgtgttcttgcgtcttttacacacgtttctgttttgaattg 233  Q
    ||||||||  ||||||||| |||||| ||||||||||||||||||||||    
T  18419131 ccctgttttatgttcttgcatctttttcacacgtttctgttttgaattg 18419083  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 190 - 234
Target Start/End: Original strand, 18778567 - 18778611
Alignment:
Q  190 tttcgtgttcttgcgtcttttacacacgtttctgttttgaattgg 234  Q
    ||||| ||||||| ||||||| |||||||||||||||||||||||    
T  18778567 tttcgcgttcttgtgtctttttcacacgtttctgttttgaattgg 18778611  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 190 - 234
Target Start/End: Original strand, 21074170 - 21074214
Alignment:
Q  190 tttcgtgttcttgcgtcttttacacacgtttctgttttgaattgg 234  Q
    ||||| ||||||| ||||||| |||||||||||||||||||||||    
T  21074170 tttcgcgttcttgtgtctttttcacacgtttctgttttgaattgg 21074214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 190 - 234
Target Start/End: Complemental strand, 22337034 - 22336990
Alignment:
Q  190 tttcgtgttcttgcgtcttttacacacgtttctgttttgaattgg 234  Q
    ||||| ||||||| ||||||| |||||||||||||||||||||||    
T  22337034 tttcgcgttcttgtgtctttttcacacgtttctgttttgaattgg 22336990  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #41
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 190 - 234
Target Start/End: Complemental strand, 22340572 - 22340528
Alignment:
Q  190 tttcgtgttcttgcgtcttttacacacgtttctgttttgaattgg 234  Q
    ||||| ||||||| ||||||| |||||||||||||||||||||||    
T  22340572 tttcgcgttcttgtgtctttttcacacgtttctgttttgaattgg 22340528  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #42
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 190 - 234
Target Start/End: Original strand, 22367056 - 22367100
Alignment:
Q  190 tttcgtgttcttgcgtcttttacacacgtttctgttttgaattgg 234  Q
    ||||| ||||||| ||||||| |||||||||||||||||||||||    
T  22367056 tttcgcgttcttgtgtctttttcacacgtttctgttttgaattgg 22367100  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #43
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 190 - 234
Target Start/End: Complemental strand, 22750655 - 22750611
Alignment:
Q  190 tttcgtgttcttgcgtcttttacacacgtttctgttttgaattgg 234  Q
    ||||| ||||||| ||||||| |||||||||||||||||||||||    
T  22750655 tttcgcgttcttgtgtctttttcacacgtttctgttttgaattgg 22750611  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #44
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 187 - 235
Target Start/End: Original strand, 23199727 - 23199775
Alignment:
Q  187 ctgtttcgtgttcttgcgtcttttacacacgtttctgttttgaattggc 235  Q
    ||||||| ||||||||| |||||| |||| |||||||||||||||||||    
T  23199727 ctgtttcatgttcttgcatctttttcacatgtttctgttttgaattggc 23199775  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #45
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 190 - 234
Target Start/End: Complemental strand, 25426325 - 25426281
Alignment:
Q  190 tttcgtgttcttgcgtcttttacacacgtttctgttttgaattgg 234  Q
    ||||| ||||||| ||||||| |||||||||||||||||||||||    
T  25426325 tttcgcgttcttgtgtctttttcacacgtttctgttttgaattgg 25426281  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #46
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 185 - 229
Target Start/End: Complemental strand, 36460689 - 36460645
Alignment:
Q  185 ccctgtttcgtgttcttgcgtcttttacacacgtttctgttttga 229  Q
    ||||||||| ||||||| |||||||| ||||||||||||||||||    
T  36460689 ccctgtttcatgttcttccgtctttttcacacgtttctgttttga 36460645  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #47
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 186 - 234
Target Start/End: Original strand, 37804407 - 37804455
Alignment:
Q  186 cctgtttcgtgttcttgcgtcttttacacacgtttctgttttgaattgg 234  Q
    ||||||||| ||||||||||||||| ||||  |||||||||||||||||    
T  37804407 cctgtttcgcgttcttgcgtctttttcacatttttctgttttgaattgg 37804455  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #48
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 196 - 235
Target Start/End: Complemental strand, 19511895 - 19511856
Alignment:
Q  196 gttcttgcgtcttttacacacgtttctgttttgaattggc 235  Q
    ||||||| ||||||| ||||||||||||||||||||||||    
T  19511895 gttcttgtgtctttttcacacgtttctgttttgaattggc 19511856  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #49
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 186 - 233
Target Start/End: Complemental strand, 20566272 - 20566225
Alignment:
Q  186 cctgtttcgtgttcttgcgtcttttacacacgtttctgttttgaattg 233  Q
    |||||||| |||||||| ||||||| || |||||||||||||||||||    
T  20566272 cctgtttcatgttcttgtgtctttttcatacgtttctgttttgaattg 20566225  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #50
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 196 - 235
Target Start/End: Original strand, 38145082 - 38145121
Alignment:
Q  196 gttcttgcgtcttttacacacgtttctgttttgaattggc 235  Q
    ||||||| ||||||| ||||||||||||||||||||||||    
T  38145082 gttcttgtgtctttttcacacgtttctgttttgaattggc 38145121  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #51
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 186 - 232
Target Start/End: Complemental strand, 23065171 - 23065125
Alignment:
Q  186 cctgtttcgtgttcttgcgtcttttacacacgtttctgttttgaatt 232  Q
    |||||||| |||||||||||||||| ||||||||| | |||||||||    
T  23065171 cctgtttcatgttcttgcgtctttttcacacgtttatcttttgaatt 23065125  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #52
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 189 - 234
Target Start/End: Complemental strand, 9776820 - 9776775
Alignment:
Q  189 gtttcgtgttcttgcgtcttttacacacgtttctgttttgaattgg 234  Q
    |||||| |||||| |||||||| |||| ||||||||||||||||||    
T  9776820 gtttcgcgttcttccgtctttttcacatgtttctgttttgaattgg 9776775  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #53
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 186 - 235
Target Start/End: Complemental strand, 19921351 - 19921302
Alignment:
Q  186 cctgtttcgtgttcttgcgtcttttacacacgtttctgttttgaattggc 235  Q
    |||||||| | ||||||||||||||  ||| |||||||||||||||||||    
T  19921351 cctgtttcattttcttgcgtcttttttacatgtttctgttttgaattggc 19921302  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #54
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 188 - 233
Target Start/End: Original strand, 21557380 - 21557425
Alignment:
Q  188 tgtttcgtgttcttgcgtcttttacacacgtttctgttttgaattg 233  Q
    |||||| ||||||||| | |||| ||||||||||||||||||||||    
T  21557380 tgtttcatgttcttgcatatttttcacacgtttctgttttgaattg 21557425  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #55
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 185 - 233
Target Start/End: Complemental strand, 17909186 - 17909138
Alignment:
Q  185 ccctgtttcgtgttcttgcgtcttttacacacgtttctgttttgaattg 233  Q
    |||||||||| ||||||||||||||| |||   ||||||||||||||||    
T  17909186 ccctgtttcgcgttcttgcgtctttttcacctatttctgttttgaattg 17909138  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #56
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 187 - 227
Target Start/End: Original strand, 40917308 - 40917348
Alignment:
Q  187 ctgtttcgtgttcttgcgtcttttacacacgtttctgtttt 227  Q
    ||||||| |||||||||||||||| |||||||||| |||||    
T  40917308 ctgtttcatgttcttgcgtctttttcacacgtttccgtttt 40917348  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #57
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 190 - 234
Target Start/End: Original strand, 43443970 - 43444014
Alignment:
Q  190 tttcgtgttcttgcgtcttttacacacgtttctgttttgaattgg 234  Q
    ||||| ||||||| ||||||| || ||||||||||||||||||||    
T  43443970 tttcgcgttcttgtgtctttttcatacgtttctgttttgaattgg 43444014  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 161; Significance: 5e-86; HSPs: 67)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 161; E-Value: 5e-86
Query Start/End: Original strand, 3 - 235
Target Start/End: Original strand, 21860771 - 21861003
Alignment:
Q  3 ggtgaaaaactgcagaattcacgtagtctggtctgtcgcgattcgccatggcggagagatatttcgcctggcggatatattcaccatttcctcgccagta 102  Q
    |||||||||||||||||||||||||||||||||||||| |||||||||||    |||||||||| |||| | |||||| ||| |||||||||||||||||    
T  21860771 ggtgaaaaactgcagaattcacgtagtctggtctgtcgtgattcgccatgagcaagagatattttgcctagtggatattttctccatttcctcgccagta 21860870  T
Q  103 gttcgcctggcgaaacatcatagtagccactcgccttgagctcgccattaattcgccttgcgaaatgttcagtggcagactgccctgtttcgtgttcttg 202  Q
     ||||||||||||||||||| |||||||||||||||||| |||||||||| ||||||| ||||||||||||||||||||||||||| |||||| ||||||    
T  21860871 attcgcctggcgaaacatcacagtagccactcgccttgatctcgccattagttcgcctagcgaaatgttcagtggcagactgccctatttcgttttcttg 21860970  T
Q  203 cgtcttttacacacgtttctgttttgaattggc 235  Q
    | |||||||||||||||||||||||||||||||    
T  21860971 catcttttacacacgtttctgttttgaattggc 21861003  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 82; E-Value: 7e-39
Query Start/End: Original strand, 3 - 235
Target Start/End: Original strand, 15635332 - 15635563
Alignment:
Q  3 ggtgaaaaactgcagaattcacgtagtctggtctgtcgcgattcgccatggcggagagatatttcgcctggcggatatattcaccatttcctcgccagta 102  Q
    ||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||| |||| |||||   | ||  |    ||||||| ||    
T  15635332 ggtgaaaaactgcagaattcacgtagtctggcctgtcgcgattcgccatggcggagagatatttctcctgacggatcattccagtagccactcgccatta 15635431  T
Q  103 gttcgcc-tggcgaaacatcatagtagccactcgccttgagctcgccattaattcgccttgcgaaatgttcagtggcagactgccctgtttcgtgttctt 201  Q
    |||| || |||||||  |||| ||||||   ||||| |   ||||||| || || |||| |||||||||||||||||||||||||||||||||| |||||    
T  15635432 gttctccatggcgaagtatcacagtagcttttcgccattccctcgccagtagttagcctggcgaaatgttcagtggcagactgccctgtttcgt-ttctt 15635530  T
Q  202 gcgtcttttacacacgtttctgttttgaattggc 235  Q
    ||||||||| ||| ||||| || |||||||||||    
T  15635531 gcgtctttttcactcgtttatg-tttgaattggc 15635563  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 183 - 233
Target Start/End: Complemental strand, 21399431 - 21399381
Alignment:
Q  183 tgccctgtttcgtgttcttgcgtcttttacacacgtttctgttttgaattg 233  Q
    ||||||||||| |||||||||||||||| ||||||||||||||||||||||    
T  21399431 tgccctgtttcatgttcttgcgtctttttcacacgtttctgttttgaattg 21399381  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 183 - 233
Target Start/End: Complemental strand, 21793924 - 21793874
Alignment:
Q  183 tgccctgtttcgtgttcttgcgtcttttacacacgtttctgttttgaattg 233  Q
    ||||||||||| |||||||||||||||| ||||||||||||||||||||||    
T  21793924 tgccctgtttcatgttcttgcgtctttttcacacgtttctgttttgaattg 21793874  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 186 - 235
Target Start/End: Original strand, 4381127 - 4381176
Alignment:
Q  186 cctgtttcgtgttcttgcgtcttttacacacgtttctgttttgaattggc 235  Q
    |||||||| |||||||||||||||| ||||||||||||||||||||||||    
T  4381127 cctgtttcatgttcttgcgtctttttcacacgtttctgttttgaattggc 4381176  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 186 - 235
Target Start/End: Original strand, 18024029 - 18024078
Alignment:
Q  186 cctgtttcgtgttcttgcgtcttttacacacgtttctgttttgaattggc 235  Q
    |||||||| |||||||||||||||| ||||||||||||||||||||||||    
T  18024029 cctgtttcatgttcttgcgtctttttcacacgtttctgttttgaattggc 18024078  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 187 - 235
Target Start/End: Complemental strand, 18834188 - 18834140
Alignment:
Q  187 ctgtttcgtgttcttgcgtcttttacacacgtttctgttttgaattggc 235  Q
    ||||||| |||||||||||||||| ||||||||||||||||||||||||    
T  18834188 ctgtttcatgttcttgcgtctttttcacacgtttctgttttgaattggc 18834140  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 185 - 233
Target Start/End: Complemental strand, 23478799 - 23478751
Alignment:
Q  185 ccctgtttcgtgttcttgcgtcttttacacacgtttctgttttgaattg 233  Q
    |||||||||| ||||||||||||||| ||||||||||||||||||||||    
T  23478799 ccctgtttcgcgttcttgcgtctttttcacacgtttctgttttgaattg 23478751  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 185 - 233
Target Start/End: Complemental strand, 44432581 - 44432533
Alignment:
Q  185 ccctgtttcgtgttcttgcgtcttttacacacgtttctgttttgaattg 233  Q
    ||||||||| |||||||||||||||| ||||||||||||||||||||||    
T  44432581 ccctgtttcatgttcttgcgtctttttcacacgtttctgttttgaattg 44432533  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 186 - 233
Target Start/End: Original strand, 36405394 - 36405441
Alignment:
Q  186 cctgtttcgtgttcttgcgtcttttacacacgtttctgttttgaattg 233  Q
    |||||||| |||||||||||||||| ||||||||||||||||||||||    
T  36405394 cctgtttcatgttcttgcgtctttttcacacgtttctgttttgaattg 36405441  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 188 - 235
Target Start/End: Original strand, 38185422 - 38185469
Alignment:
Q  188 tgtttcgtgttcttgcgtcttttacacacgtttctgttttgaattggc 235  Q
    |||||| |||||||||||||||| ||||||||||||||||||||||||    
T  38185422 tgtttcatgttcttgcgtctttttcacacgtttctgttttgaattggc 38185469  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 186 - 232
Target Start/End: Complemental strand, 1485059 - 1485013
Alignment:
Q  186 cctgtttcgtgttcttgcgtcttttacacacgtttctgttttgaatt 232  Q
    |||||||| |||||||||||||||| |||||||||||||||||||||    
T  1485059 cctgtttcatgttcttgcgtctttttcacacgtttctgttttgaatt 1485013  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 186 - 232
Target Start/End: Complemental strand, 4483937 - 4483891
Alignment:
Q  186 cctgtttcgtgttcttgcgtcttttacacacgtttctgttttgaatt 232  Q
    |||||||| |||||||||||||||| |||||||||||||||||||||    
T  4483937 cctgtttcatgttcttgcgtctttttcacacgtttctgttttgaatt 4483891  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 186 - 232
Target Start/End: Original strand, 5852797 - 5852843
Alignment:
Q  186 cctgtttcgtgttcttgcgtcttttacacacgtttctgttttgaatt 232  Q
    |||||||| |||||||||||||||| |||||||||||||||||||||    
T  5852797 cctgtttcatgttcttgcgtctttttcacacgtttctgttttgaatt 5852843  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 185 - 235
Target Start/End: Original strand, 8414082 - 8414132
Alignment:
Q  185 ccctgtttcgtgttcttgcgtcttttacacacgtttctgttttgaattggc 235  Q
    |||| ||||| ||||||||||||||| ||||||||||||||||||||||||    
T  8414082 ccctatttcgcgttcttgcgtctttttcacacgtttctgttttgaattggc 8414132  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 185 - 235
Target Start/End: Complemental strand, 11775441 - 11775391
Alignment:
Q  185 ccctgtttcgtgttcttgcgtcttttacacacgtttctgttttgaattggc 235  Q
    |||| ||||| ||||||||||||||| ||||||||||||||||||||||||    
T  11775441 ccctatttcgcgttcttgcgtctttttcacacgtttctgttttgaattggc 11775391  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 186 - 232
Target Start/End: Original strand, 14408949 - 14408995
Alignment:
Q  186 cctgtttcgtgttcttgcgtcttttacacacgtttctgttttgaatt 232  Q
    |||||||| |||||||||||||||| |||||||||||||||||||||    
T  14408949 cctgtttcatgttcttgcgtctttttcacacgtttctgttttgaatt 14408995  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 185 - 235
Target Start/End: Complemental strand, 16198553 - 16198503
Alignment:
Q  185 ccctgtttcgtgttcttgcgtcttttacacacgtttctgttttgaattggc 235  Q
    |||||||||| ||||||||||||||| ||||| ||||||||||||||||||    
T  16198553 ccctgtttcgcgttcttgcgtctttttcacacatttctgttttgaattggc 16198503  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 185 - 235
Target Start/End: Complemental strand, 19880547 - 19880497
Alignment:
Q  185 ccctgtttcgtgttcttgcgtcttttacacacgtttctgttttgaattggc 235  Q
    |||||||||| ||||||||||||||| ||||||||| ||||||||||||||    
T  19880547 ccctgtttcgcgttcttgcgtctttttcacacgtttatgttttgaattggc 19880497  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 185 - 235
Target Start/End: Complemental strand, 19882687 - 19882637
Alignment:
Q  185 ccctgtttcgtgttcttgcgtcttttacacacgtttctgttttgaattggc 235  Q
    |||||||||| ||||||||||||||| |||||||||||||||| |||||||    
T  19882687 ccctgtttcgcgttcttgcgtcttttgcacacgtttctgtttttaattggc 19882637  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 185 - 235
Target Start/End: Complemental strand, 26454430 - 26454380
Alignment:
Q  185 ccctgtttcgtgttcttgcgtcttttacacacgtttctgttttgaattggc 235  Q
    |||||||||| |||||||| |||||| ||||||||||||||||||||||||    
T  26454430 ccctgtttcgcgttcttgcatctttttcacacgtttctgttttgaattggc 26454380  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 186 - 235
Target Start/End: Complemental strand, 17795950 - 17795901
Alignment:
Q  186 cctgtttcgtgttcttgcgtcttttacacacgtttctgttttgaattggc 235  Q
    ||||||||| ||||| ||||||||| ||||||||||||||||||||||||    
T  17795950 cctgtttcgcgttctagcgtctttttcacacgtttctgttttgaattggc 17795901  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 186 - 235
Target Start/End: Complemental strand, 19140483 - 19140434
Alignment:
Q  186 cctgtttcgtgttcttgcgtcttttacacacgtttctgttttgaattggc 235  Q
    |||||||| ||||||| |||||||| ||||||||||||||||||||||||    
T  19140483 cctgtttcatgttcttacgtctttttcacacgtttctgttttgaattggc 19140434  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 186 - 235
Target Start/End: Original strand, 20178855 - 20178904
Alignment:
Q  186 cctgtttcgtgttcttgcgtcttttacacacgtttctgttttgaattggc 235  Q
    |||||||| ||||||||| |||||| ||||||||||||||||||||||||    
T  20178855 cctgtttcatgttcttgcatctttttcacacgtttctgttttgaattggc 20178904  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 186 - 235
Target Start/End: Complemental strand, 22207985 - 22207936
Alignment:
Q  186 cctgtttcgtgttcttgcgtcttttacacacgtttctgttttgaattggc 235  Q
    |||||||  |||||||||||||||| ||||||||||||||||||||||||    
T  22207985 cctgttttatgttcttgcgtctttttcacacgtttctgttttgaattggc 22207936  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 186 - 235
Target Start/End: Complemental strand, 22474469 - 22474420
Alignment:
Q  186 cctgtttcgtgttcttgcgtcttttacacacgtttctgttttgaattggc 235  Q
    |||||||| |||||||||||||||| |||| |||||||||||||||||||    
T  22474469 cctgtttcatgttcttgcgtctttttcacatgtttctgttttgaattggc 22474420  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 168 - 229
Target Start/End: Complemental strand, 23883590 - 23883529
Alignment:
Q  168 tgttcagtggcagactgccctgtttcgtgttcttgcgtcttttacacacgtttctgttttga 229  Q
    |||| |||||||| ||| |||||||||||||||||||||| || | ||||||||||||||||    
T  23883590 tgtttagtggcagtctgtcctgtttcgtgttcttgcgtctgtttcgcacgtttctgttttga 23883529  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 185 - 234
Target Start/End: Original strand, 25657849 - 25657898
Alignment:
Q  185 ccctgtttcgtgttcttgcgtcttttacacacgtttctgttttgaattgg 234  Q
    |||| ||||||||||||||||||||| |||| ||||||||||||||||||    
T  25657849 ccctatttcgtgttcttgcgtctttttcacatgtttctgttttgaattgg 25657898  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 185 - 233
Target Start/End: Complemental strand, 364507 - 364459
Alignment:
Q  185 ccctgtttcgtgttcttgcgtcttttacacacgtttctgttttgaattg 233  Q
    ||||||||| |||||||||||||||| | ||||||||||||||||||||    
T  364507 ccctgtttcatgttcttgcgtctttttcgcacgtttctgttttgaattg 364459  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 195 - 235
Target Start/End: Original strand, 6102096 - 6102136
Alignment:
Q  195 tgttcttgcgtcttttacacacgtttctgttttgaattggc 235  Q
    |||||||||||||||| ||||||||||||||||||||||||    
T  6102096 tgttcttgcgtctttttcacacgtttctgttttgaattggc 6102136  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 186 - 234
Target Start/End: Original strand, 18816813 - 18816861
Alignment:
Q  186 cctgtttcgtgttcttgcgtcttttacacacgtttctgttttgaattgg 234  Q
    |||||||| |||||||||||||||| |||||||||| ||||||||||||    
T  18816813 cctgtttcatgttcttgcgtctttttcacacgtttcggttttgaattgg 18816861  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 195 - 235
Target Start/End: Original strand, 36732867 - 36732907
Alignment:
Q  195 tgttcttgcgtcttttacacacgtttctgttttgaattggc 235  Q
    |||||||||||||||| ||||||||||||||||||||||||    
T  36732867 tgttcttgcgtctttttcacacgtttctgttttgaattggc 36732907  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 186 - 234
Target Start/End: Original strand, 42818241 - 42818289
Alignment:
Q  186 cctgtttcgtgttcttgcgtcttttacacacgtttctgttttgaattgg 234  Q
    |||||||| |||||||| ||||||| |||||||||||||||||||||||    
T  42818241 cctgtttcatgttcttgtgtctttttcacacgtttctgttttgaattgg 42818289  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 186 - 233
Target Start/End: Original strand, 6573391 - 6573438
Alignment:
Q  186 cctgtttcgtgttcttgcgtcttttacacacgtttctgttttgaattg 233  Q
    |||||||| |||||||||||||||| ||||| ||||||||||||||||    
T  6573391 cctgtttcatgttcttgcgtctttttcacacatttctgttttgaattg 6573438  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 155 - 234
Target Start/End: Original strand, 12037759 - 12037838
Alignment:
Q  155 tcgccttgcgaaatgttcagtggcagactgccctgtttcgtgttcttgcgtcttttacacacgtttctgttttgaattgg 234  Q
    |||||| ||||  ||||||||||||| ||||||||||| | |||||||||||| || || ||||||||| ||||| ||||    
T  12037759 tcgcctcgcgagttgttcagtggcagtctgccctgttttgcgttcttgcgtctgtttcatacgtttctgctttgagttgg 12037838  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 187 - 230
Target Start/End: Original strand, 18677570 - 18677613
Alignment:
Q  187 ctgtttcgtgttcttgcgtcttttacacacgtttctgttttgaa 230  Q
    ||||||| |||||||||||||||| |||||||||||||||||||    
T  18677570 ctgtttcatgttcttgcgtctttttcacacgtttctgttttgaa 18677613  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 188 - 235
Target Start/End: Original strand, 19331913 - 19331960
Alignment:
Q  188 tgtttcgtgttcttgcgtcttttacacacgtttctgttttgaattggc 235  Q
    ||||||| ||||||| ||||||| ||||||||||||||||||||||||    
T  19331913 tgtttcgcgttcttgtgtctttttcacacgtttctgttttgaattggc 19331960  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 186 - 233
Target Start/End: Original strand, 20083972 - 20084019
Alignment:
Q  186 cctgtttcgtgttcttgcgtcttttacacacgtttctgttttgaattg 233  Q
    |||||||| |||||||||||||||| ||||||||||||| ||||||||    
T  20083972 cctgtttcatgttcttgcgtctttttcacacgtttctgtattgaattg 20084019  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 188 - 235
Target Start/End: Complemental strand, 25295848 - 25295801
Alignment:
Q  188 tgtttcgtgttcttgcgtcttttacacacgtttctgttttgaattggc 235  Q
    ||||||||||||||| ||||||| ||||| ||||||||||||||||||    
T  25295848 tgtttcgtgttcttgtgtctttttcacacatttctgttttgaattggc 25295801  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 188 - 235
Target Start/End: Complemental strand, 25757868 - 25757821
Alignment:
Q  188 tgtttcgtgttcttgcgtcttttacacacgtttctgttttgaattggc 235  Q
    ||||||||||||||| ||||||| ||||| ||||||||||||||||||    
T  25757868 tgtttcgtgttcttgtgtctttttcacacatttctgttttgaattggc 25757821  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 188 - 234
Target Start/End: Original strand, 5082548 - 5082594
Alignment:
Q  188 tgtttcgtgttcttgcgtcttttacacacgtttctgttttgaattgg 234  Q
    |||||| |||||||| ||||||| |||||||||||||||||||||||    
T  5082548 tgtttcatgttcttgtgtctttttcacacgtttctgttttgaattgg 5082594  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #42
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 189 - 235
Target Start/End: Complemental strand, 5761248 - 5761202
Alignment:
Q  189 gtttcgtgttcttgcgtcttttacacacgtttctgttttgaattggc 235  Q
    ||||| ||||||||||||||||  |||||||||||||||||||||||    
T  5761248 gtttcatgttcttgcgtctttttaacacgtttctgttttgaattggc 5761202  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #43
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 185 - 235
Target Start/End: Complemental strand, 22483465 - 22483415
Alignment:
Q  185 ccctgtttcgtgttcttgcgtcttttacacacgtttctgttttgaattggc 235  Q
    ||||||||| ||||| |||||||||| ||||| ||||||||||||||||||    
T  22483465 ccctgtttcatgttcatgcgtctttttcacacatttctgttttgaattggc 22483415  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #44
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 186 - 232
Target Start/End: Complemental strand, 23914641 - 23914595
Alignment:
Q  186 cctgtttcgtgttcttgcgtcttttacacacgtttctgttttgaatt 232  Q
    |||||||| |||||||||||||||| ||||||||||| |||||||||    
T  23914641 cctgtttcatgttcttgcgtctttttcacacgtttctattttgaatt 23914595  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #45
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 195 - 233
Target Start/End: Original strand, 25483817 - 25483855
Alignment:
Q  195 tgttcttgcgtcttttacacacgtttctgttttgaattg 233  Q
    |||||||||||||||| ||||||||||||||||||||||    
T  25483817 tgttcttgcgtctttttcacacgtttctgttttgaattg 25483855  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #46
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 190 - 235
Target Start/End: Original strand, 27941227 - 27941272
Alignment:
Q  190 tttcgtgttcttgcgtcttttacacacgtttctgttttgaattggc 235  Q
    ||||| ||||||| ||||||| ||||||||||||||||||||||||    
T  27941227 tttcgcgttcttgtgtctttttcacacgtttctgttttgaattggc 27941272  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #47
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 186 - 235
Target Start/End: Original strand, 39936345 - 39936394
Alignment:
Q  186 cctgtttcgtgttcttgcgtcttttacacacgtttctgttttgaattggc 235  Q
    |||||||| ||||||||| ||||||  |||||||||||||||||||||||    
T  39936345 cctgtttcatgttcttgcatctttttaacacgtttctgttttgaattggc 39936394  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #48
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 190 - 234
Target Start/End: Original strand, 223266 - 223310
Alignment:
Q  190 tttcgtgttcttgcgtcttttacacacgtttctgttttgaattgg 234  Q
    ||||| ||||||| ||||||| |||||||||||||||||||||||    
T  223266 tttcgcgttcttgtgtctttttcacacgtttctgttttgaattgg 223310  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #49
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 190 - 234
Target Start/End: Original strand, 688037 - 688081
Alignment:
Q  190 tttcgtgttcttgcgtcttttacacacgtttctgttttgaattgg 234  Q
    ||||| ||||||| ||||||| |||||||||||||||||||||||    
T  688037 tttcgcgttcttgtgtctttttcacacgtttctgttttgaattgg 688081  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #50
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 190 - 234
Target Start/End: Original strand, 736889 - 736933
Alignment:
Q  190 tttcgtgttcttgcgtcttttacacacgtttctgttttgaattgg 234  Q
    ||||| ||||||| ||||||| |||||||||||||||||||||||    
T  736889 tttcgcgttcttgtgtctttttcacacgtttctgttttgaattgg 736933  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #51
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 190 - 234
Target Start/End: Original strand, 860784 - 860828
Alignment:
Q  190 tttcgtgttcttgcgtcttttacacacgtttctgttttgaattgg 234  Q
    ||||| ||||||| ||||||| |||||||||||||||||||||||    
T  860784 tttcgcgttcttgtgtctttttcacacgtttctgttttgaattgg 860828  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #52
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 186 - 230
Target Start/End: Original strand, 4541878 - 4541922
Alignment:
Q  186 cctgtttcgtgttcttgcgtcttttacacacgtttctgttttgaa 230  Q
    |||||||| |||||||||||||||| |||||||||| ||||||||    
T  4541878 cctgtttcatgttcttgcgtctttttcacacgtttccgttttgaa 4541922  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #53
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 186 - 230
Target Start/End: Original strand, 29763203 - 29763247
Alignment:
Q  186 cctgtttcgtgttcttgcgtcttttacacacgtttctgttttgaa 230  Q
    |||||||| |||||||||||||||| |||||||||| ||||||||    
T  29763203 cctgtttcatgttcttgcgtctttttcacacgtttccgttttgaa 29763247  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #54
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 185 - 229
Target Start/End: Original strand, 42559861 - 42559905
Alignment:
Q  185 ccctgtttcgtgttcttgcgtcttttacacacgtttctgttttga 229  Q
    ||||||||| ||||||||| |||||| ||||||||||||||||||    
T  42559861 ccctgtttcatgttcttgcatctttttcacacgtttctgttttga 42559905  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #55
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 186 - 233
Target Start/End: Complemental strand, 21514037 - 21513990
Alignment:
Q  186 cctgtttcgtgttcttgcgtcttttacacacgtttctgttttgaattg 233  Q
    |||||||  ||||||| |||||||| ||||||||||||||||||||||    
T  21514037 cctgttttatgttcttccgtctttttcacacgtttctgttttgaattg 21513990  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #56
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 187 - 230
Target Start/End: Original strand, 24485549 - 24485592
Alignment:
Q  187 ctgtttcgtgttcttgcgtcttttacacacgtttctgttttgaa 230  Q
    ||||||| |||||||||||||||| |||||||||| ||||||||    
T  24485549 ctgtttcatgttcttgcgtctttttcacacgtttccgttttgaa 24485592  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #57
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 196 - 235
Target Start/End: Complemental strand, 44477132 - 44477093
Alignment:
Q  196 gttcttgcgtcttttacacacgtttctgttttgaattggc 235  Q
    ||||||| ||||||| ||||||||||||||||||||||||    
T  44477132 gttcttgtgtctttttcacacgtttctgttttgaattggc 44477093  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #58
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 196 - 235
Target Start/End: Complemental strand, 44480394 - 44480355
Alignment:
Q  196 gttcttgcgtcttttacacacgtttctgttttgaattggc 235  Q
    ||||||| ||||||| ||||||||||||||||||||||||    
T  44480394 gttcttgtgtctttttcacacgtttctgttttgaattggc 44480355  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #59
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 186 - 232
Target Start/End: Complemental strand, 14824432 - 14824386
Alignment:
Q  186 cctgtttcgtgttcttgcgtcttttacacacgtttctgttttgaatt 232  Q
    |||||||| ||||||||||||||||  | ||||||||||||||||||    
T  14824432 cctgtttcatgttcttgcgtcttttttatacgtttctgttttgaatt 14824386  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #60
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 185 - 235
Target Start/End: Complemental strand, 18612105 - 18612055
Alignment:
Q  185 ccctgtttcgtgttcttgcgtcttttacacacgtttctgttttgaattggc 235  Q
    |||||||||||||||||||||||||| |||   ||||| ||||||||||||    
T  18612105 ccctgtttcgtgttcttgcgtctttttcacctatttctattttgaattggc 18612055  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #61
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 186 - 232
Target Start/End: Original strand, 20045700 - 20045746
Alignment:
Q  186 cctgtttcgtgttcttgcgtcttttacacacgtttctgttttgaatt 232  Q
    |||||||| ||||||| |||||||| ||||||||| |||||||||||    
T  20045700 cctgtttcatgttctttcgtctttttcacacgtttatgttttgaatt 20045746  T

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Target: chr8; HSP #62
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 168 - 229
Target Start/End: Complemental strand, 20879079 - 20879017
Alignment:
Q  168 tgttcagtggcagactgccctgttt-cgtgttcttgcgtcttttacacacgtttctgttttga 229  Q
    |||| |||||||| || |||||||| || |||||||||||| || ||||||||||||||||||    
T  20879079 tgtttagtggcagtctaccctgttttcgggttcttgcgtctgtttcacacgtttctgttttga 20879017  T

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Target: chr8; HSP #63
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 186 - 232
Target Start/End: Original strand, 45290052 - 45290098
Alignment:
Q  186 cctgtttcgtgttcttgcgtcttttacacacgtttctgttttgaatt 232  Q
    |||||||| ||||||||||||| ||  ||||||||||||||||||||    
T  45290052 cctgtttcatgttcttgcgtctctttgacacgtttctgttttgaatt 45290098  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #64
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 185 - 234
Target Start/End: Complemental strand, 22147130 - 22147081
Alignment:
Q  185 ccctgtttcgtgttcttgcgtcttttacacacgtttctgttttgaattgg 234  Q
    |||||||||| ||||||||||||||| |||   |||||||||||||||||    
T  22147130 ccctgtttcgcgttcttgcgtctttttcacctatttctgttttgaattgg 22147081  T

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Target: chr8; HSP #65
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 186 - 235
Target Start/End: Original strand, 22258638 - 22258687
Alignment:
Q  186 cctgtttcgtgttcttgcgtcttttacacacgtttctgttttgaattggc 235  Q
    |||||||| |||||||||||||||| ||||| ||| | ||||||||||||    
T  22258638 cctgtttcatgttcttgcgtctttttcacacctttattttttgaattggc 22258687  T

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Target: chr8; HSP #66
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 187 - 235
Target Start/End: Original strand, 17437653 - 17437701
Alignment:
Q  187 ctgtttcgtgttcttgcgtcttttacacacgtttctgttttgaattggc 235  Q
    ||||||| ||||||||| |||||| | | ||||||||||||||||||||    
T  17437653 ctgtttcatgttcttgcatctttttctctcgtttctgttttgaattggc 17437701  T

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Target: chr8; HSP #67
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 185 - 233
Target Start/End: Complemental strand, 24907493 - 24907445
Alignment:
Q  185 ccctgtttcgtgttcttgcgtcttttacacacgtttctgttttgaattg 233  Q
    |||||||||| ||||||||||||||| ||||| ||| | ||||||||||    
T  24907493 ccctgtttcgcgttcttgcgtctttttcacacatttatattttgaattg 24907445  T

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Target: chr7 (Bit Score: 155; Significance: 2e-82; HSPs: 107)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 155; E-Value: 2e-82
Query Start/End: Original strand, 3 - 232
Target Start/End: Original strand, 14153112 - 14153352
Alignment:
Q  3 ggtgaaaaactgcagaattcacgtagtctggtctgtcgcgattcgccatggcggagagatatttcgcctggcggata-----------tattcaccattt 91  Q
    ||||||||||||||| |||||||||||||||||||||| ||||||||||||||||||||||||||||||||||| |            | ||| ||||||    
T  14153112 ggtgaaaaactgcagtattcacgtagtctggtctgtcgtgattcgccatggcggagagatatttcgcctggcgggtcactccagtagcttttcgccattt 14153211  T
Q  92 cctcgccagtagttcgcctggcgaaacatcatagtagccactcgccttgagctcgccattaattcgccttgcgaaatgttcagtggcagactgccctgtt 191  Q
    ||||||||||||||||||||| ||||||||| |||||| |||||||||||||||||||||| ||||||| ||||||||||||||||||||||||||| ||    
T  14153212 cctcgccagtagttcgcctggtgaaacatcacagtagctactcgccttgagctcgccattagttcgcctggcgaaatgttcagtggcagactgccctatt 14153311  T
Q  192 tcgtgttcttgcgtcttttacacacgtttctgttttgaatt 232  Q
    |||||||||||||||||||||||||||||||||||||||||    
T  14153312 tcgtgttcttgcgtcttttacacacgtttctgttttgaatt 14153352  T

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Target: chr7; HSP #2
Raw Score: 123; E-Value: 3e-63
Query Start/End: Original strand, 3 - 235
Target Start/End: Original strand, 37727078 - 37727310
Alignment:
Q  3 ggtgaaaaactgcagaattcacgtagtctggtctgtcgcgattcgccatggcggagagatatttcgcctggcggat-ata----------ttcaccattt 91  Q
    |||||||||||||||||||| |||| ||||||||||||||||||||||||||||||||| |||||||||||||||| |||          ||| ||||||    
T  37727078 ggtgaaaaactgcagaattcccgtaatctggtctgtcgcgattcgccatggcggagagaaatttcgcctggcggatcataccagtagcttttcgccattt 37727177  T
Q  92 cctcgccagtagttcgcctggcgaaacatcatagtagccactcgccttgagctcgccattaattcgccttgcgaaatgttcagtggcagactgccctgtt 191  Q
    |||| |||||||||||||||||||||||||| ||||||||||||||           |||| ||||||| |||||||||||||||||||||| |||||||    
T  37727178 cctcaccagtagttcgcctggcgaaacatcacagtagccactcgcc-----------attagttcgcctggcgaaatgttcagtggcagactaccctgtt 37727266  T
Q  192 tcgtgttcttgcgtcttttacacacgtttctgttttgaattggc 235  Q
    |||||||||||| |||||||||||||||||||||||||||||||    
T  37727267 tcgtgttcttgcatcttttacacacgtttctgttttgaattggc 37727310  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 85; E-Value: 1e-40
Query Start/End: Original strand, 3 - 150
Target Start/End: Complemental strand, 42041983 - 42041825
Alignment:
Q  3 ggtgaaaaactgcagaattcacgtagtctggtctgtcgcgattcgccatggcggagagatatttcgcctggcggat-----------atattcaccattt 91  Q
    |||||||||||||| ||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||            | ||| ||||||    
T  42041983 ggtgaaaaactgcataattcacgtagtctgatctgtcgcgattcgccatggcggagagatatttcgcctggcggatcattccagtagcttttcgccattt 42041884  T
Q  92 cctcgccagtagttcgcctggcgaaacatcatagtagccactcgccttgagctcgccat 150  Q
    |||||||| |||||||||||||||||||||| ||||||||||||||||  |||||||||    
T  42041883 cctcgccaatagttcgcctggcgaaacatcacagtagccactcgccttttgctcgccat 42041825  T

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Target: chr7; HSP #4
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 3 - 78
Target Start/End: Complemental strand, 15726144 - 15726069
Alignment:
Q  3 ggtgaaaaactgcagaattcacgtagtctggtctgtcgcgattcgccatggcggagagatatttcgcctggcggat 78  Q
    |||||||||||||| |||||||||||||||||||||||||| ||| || |||||| ||||||||||||||||||||    
T  15726144 ggtgaaaaactgcaaaattcacgtagtctggtctgtcgcgactcggcagggcggaaagatatttcgcctggcggat 15726069  T

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Target: chr7; HSP #5
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 183 - 235
Target Start/End: Complemental strand, 15720470 - 15720418
Alignment:
Q  183 tgccctgtttcgtgttcttgcgtcttttacacacgtttctgttttgaattggc 235  Q
    ||||||||||| |||||||||||||||| ||||||||||||||||||||||||    
T  15720470 tgccctgtttcatgttcttgcgtctttttcacacgtttctgttttgaattggc 15720418  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 155 - 235
Target Start/End: Original strand, 33556672 - 33556752
Alignment:
Q  155 tcgccttgcgaaatgttcagtggcagactgccctgtttcgtgttcttgcgtcttttacacacgtttctgttttgaattggc 235  Q
    |||||| ||||  ||||| ||||||| ||||||||||||| |||||||||||| || |||||||||||||||||| |||||    
T  33556672 tcgcctcgcgagttgttcggtggcagtctgccctgtttcgcgttcttgcgtctatttcacacgtttctgttttgagttggc 33556752  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 155 - 234
Target Start/End: Original strand, 42566409 - 42566488
Alignment:
Q  155 tcgccttgcgaaatgttcagtggcagactgccctgtttcgtgttcttgcgtcttttacacacgtttctgttttgaattgg 234  Q
    |||||| ||||| || |||||||||| ||||| |||||||||||||||||||| || ||||||||| |||||||| ||||    
T  42566409 tcgcctcgcgaattgctcagtggcagcctgccttgtttcgtgttcttgcgtctgtttcacacgtttttgttttgagttgg 42566488  T

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Target: chr7; HSP #8
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 185 - 235
Target Start/End: Original strand, 1856733 - 1856783
Alignment:
Q  185 ccctgtttcgtgttcttgcgtcttttacacacgtttctgttttgaattggc 235  Q
    |||||||||| ||||||||||||||| ||||||||||||||||||||||||    
T  1856733 ccctgtttcgcgttcttgcgtctttttcacacgtttctgttttgaattggc 1856783  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 186 - 232
Target Start/End: Complemental strand, 14259070 - 14259024
Alignment:
Q  186 cctgtttcgtgttcttgcgtcttttacacacgtttctgttttgaatt 232  Q
    |||||||| ||||||||||||||||||||||||||||||||||||||    
T  14259070 cctgtttcatgttcttgcgtcttttacacacgtttctgttttgaatt 14259024  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 168 - 234
Target Start/End: Complemental strand, 18570218 - 18570152
Alignment:
Q  168 tgttcagtggcagactgccctgtttcgtgttcttgcgtcttttacacacgtttctgttttgaattgg 234  Q
    ||||||||||||| |||||||||||||||||||||||||| || |  ||||||||||||| ||||||    
T  18570218 tgttcagtggcagtctgccctgtttcgtgttcttgcgtctgtttcgtacgtttctgttttaaattgg 18570152  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 155 - 229
Target Start/End: Original strand, 36301262 - 36301336
Alignment:
Q  155 tcgccttgcgaaatgttcagtggcagactgccctgtttcgtgttcttgcgtcttttacacacgtttctgttttga 229  Q
    |||||| ||||  ||||||||||||| |||||||||||||||||||||||| | || | ||||||||||||||||    
T  36301262 tcgcctcgcgagttgttcagtggcagtctgccctgtttcgtgttcttgcgtgtgtttcgcacgtttctgttttga 36301336  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 186 - 235
Target Start/End: Complemental strand, 3287708 - 3287659
Alignment:
Q  186 cctgtttcgtgttcttgcgtcttttacacacgtttctgttttgaattggc 235  Q
    |||||||| |||||||||||||||| ||||||||||||||||||||||||    
T  3287708 cctgtttcatgttcttgcgtctttttcacacgtttctgttttgaattggc 3287659  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 186 - 235
Target Start/End: Original strand, 8851493 - 8851542
Alignment:
Q  186 cctgtttcgtgttcttgcgtcttttacacacgtttctgttttgaattggc 235  Q
    |||||||| |||||||||||||||| ||||||||||||||||||||||||    
T  8851493 cctgtttcatgttcttgcgtctttttcacacgtttctgttttgaattggc 8851542  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 186 - 235
Target Start/End: Original strand, 12127497 - 12127546
Alignment:
Q  186 cctgtttcgtgttcttgcgtcttttacacacgtttctgttttgaattggc 235  Q
    |||||||| |||||||||||||||| ||||||||||||||||||||||||    
T  12127497 cctgtttcatgttcttgcgtctttttcacacgtttctgttttgaattggc 12127546  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 186 - 235
Target Start/End: Complemental strand, 12371993 - 12371944
Alignment:
Q  186 cctgtttcgtgttcttgcgtcttttacacacgtttctgttttgaattggc 235  Q
    |||||||| |||||||||||||||| ||||||||||||||||||||||||    
T  12371993 cctgtttcatgttcttgcgtctttttcacacgtttctgttttgaattggc 12371944  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 186 - 235
Target Start/End: Original strand, 12465594 - 12465643
Alignment:
Q  186 cctgtttcgtgttcttgcgtcttttacacacgtttctgttttgaattggc 235  Q
    |||||||| |||||||||||||||| ||||||||||||||||||||||||    
T  12465594 cctgtttcatgttcttgcgtctttttcacacgtttctgttttgaattggc 12465643  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 183 - 235
Target Start/End: Original strand, 58749 - 58801
Alignment:
Q  183 tgccctgtttcgtgttcttgcgtcttttacacacgtttctgttttgaattggc 235  Q
    |||| |||||| |||||||||||||||| ||||||||||||||||||||||||    
T  58749 tgccatgtttcatgttcttgcgtctttttcacacgtttctgttttgaattggc 58801  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 187 - 235
Target Start/End: Original strand, 14928667 - 14928715
Alignment:
Q  187 ctgtttcgtgttcttgcgtcttttacacacgtttctgttttgaattggc 235  Q
    ||||||| |||||||||||||||| ||||||||||||||||||||||||    
T  14928667 ctgtttcatgttcttgcgtctttttcacacgtttctgttttgaattggc 14928715  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 187 - 235
Target Start/End: Original strand, 15352133 - 15352181
Alignment:
Q  187 ctgtttcgtgttcttgcgtcttttacacacgtttctgttttgaattggc 235  Q
    ||||||| |||||||||||||||| ||||||||||||||||||||||||    
T  15352133 ctgtttcatgttcttgcgtctttttcacacgtttctgttttgaattggc 15352181  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 185 - 233
Target Start/End: Original strand, 30820589 - 30820637
Alignment:
Q  185 ccctgtttcgtgttcttgcgtcttttacacacgtttctgttttgaattg 233  Q
    ||||||||| |||||||||||||||| ||||||||||||||||||||||    
T  30820589 ccctgtttcatgttcttgcgtctttttcacacgtttctgttttgaattg 30820637  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 187 - 235
Target Start/End: Complemental strand, 34957888 - 34957840
Alignment:
Q  187 ctgtttcgtgttcttgcgtcttttacacacgtttctgttttgaattggc 235  Q
    ||||||| |||||||||||||||| ||||||||||||||||||||||||    
T  34957888 ctgtttcatgttcttgcgtctttttcacacgtttctgttttgaattggc 34957840  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 185 - 233
Target Start/End: Complemental strand, 38828780 - 38828732
Alignment:
Q  185 ccctgtttcgtgttcttgcgtcttttacacacgtttctgttttgaattg 233  Q
    ||||||||| |||||||||||||||| ||||||||||||||||||||||    
T  38828780 ccctgtttcatgttcttgcgtctttttcacacgtttctgttttgaattg 38828732  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 168 - 235
Target Start/End: Original strand, 8931406 - 8931473
Alignment:
Q  168 tgttcagtggcagactgccctgtttcgtgttcttgcgtcttttacacacgtttctgttttgaattggc 235  Q
    ||||||||| ||| |||||||||||||||||| ||||||| || | |||||||||||||||| |||||    
T  8931406 tgttcagtgacagtctgccctgtttcgtgttcctgcgtctgtttcgcacgtttctgttttgagttggc 8931473  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 188 - 235
Target Start/End: Original strand, 46386423 - 46386470
Alignment:
Q  188 tgtttcgtgttcttgcgtcttttacacacgtttctgttttgaattggc 235  Q
    |||||| |||||||||||||||| ||||||||||||||||||||||||    
T  46386423 tgtttcatgttcttgcgtctttttcacacgtttctgttttgaattggc 46386470  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 186 - 233
Target Start/End: Complemental strand, 47094798 - 47094751
Alignment:
Q  186 cctgtttcgtgttcttgcgtcttttacacacgtttctgttttgaattg 233  Q
    |||||||| |||||||||||||||| ||||||||||||||||||||||    
T  47094798 cctgtttcatgttcttgcgtctttttcacacgtttctgttttgaattg 47094751  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 186 - 232
Target Start/End: Complemental strand, 456978 - 456932
Alignment:
Q  186 cctgtttcgtgttcttgcgtcttttacacacgtttctgttttgaatt 232  Q
    |||||||| |||||||||||||||| |||||||||||||||||||||    
T  456978 cctgtttcatgttcttgcgtctttttcacacgtttctgttttgaatt 456932  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 185 - 235
Target Start/End: Complemental strand, 11661824 - 11661774
Alignment:
Q  185 ccctgtttcgtgttcttgcgtcttttacacacgtttctgttttgaattggc 235  Q
    ||||||| || ||||||||||||||| ||||||||||||||||||||||||    
T  11661824 ccctgttccgcgttcttgcgtctttttcacacgtttctgttttgaattggc 11661774  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 186 - 232
Target Start/End: Complemental strand, 13870003 - 13869957
Alignment:
Q  186 cctgtttcgtgttcttgcgtcttttacacacgtttctgttttgaatt 232  Q
    |||||||| |||||||||||||||| |||||||||||||||||||||    
T  13870003 cctgtttcatgttcttgcgtctttttcacacgtttctgttttgaatt 13869957  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 186 - 232
Target Start/End: Original strand, 15376218 - 15376264
Alignment:
Q  186 cctgtttcgtgttcttgcgtcttttacacacgtttctgttttgaatt 232  Q
    |||||||| |||||||||||||||| |||||||||||||||||||||    
T  15376218 cctgtttcatgttcttgcgtctttttcacacgtttctgttttgaatt 15376264  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 185 - 235
Target Start/End: Original strand, 20252685 - 20252735
Alignment:
Q  185 ccctgtttcgtgttcttgcgtcttttacacacgtttctgttttgaattggc 235  Q
    ||||||||| |||||||||||||||| |||| |||||||||||||||||||    
T  20252685 ccctgtttcatgttcttgcgtctttttcacatgtttctgttttgaattggc 20252735  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 186 - 232
Target Start/End: Original strand, 20384628 - 20384674
Alignment:
Q  186 cctgtttcgtgttcttgcgtcttttacacacgtttctgttttgaatt 232  Q
    |||||||| |||||||||||||||| |||||||||||||||||||||    
T  20384628 cctgtttcatgttcttgcgtctttttcacacgtttctgttttgaatt 20384674  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 185 - 235
Target Start/End: Original strand, 25926633 - 25926683
Alignment:
Q  185 ccctgtttcgtgttcttgcgtcttttacacacgtttctgttttgaattggc 235  Q
    |||| ||||| ||||||||||||||| ||||||||||||||||||||||||    
T  25926633 ccctatttcgcgttcttgcgtctttttcacacgtttctgttttgaattggc 25926683  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 185 - 235
Target Start/End: Original strand, 29052488 - 29052538
Alignment:
Q  185 ccctgtttcgtgttcttgcgtcttttacacacgtttctgttttgaattggc 235  Q
    |||||||| | ||||||||||||||| ||||||||||||||||||||||||    
T  29052488 ccctgttttgcgttcttgcgtctttttcacacgtttctgttttgaattggc 29052538  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 185 - 235
Target Start/End: Original strand, 32160535 - 32160585
Alignment:
Q  185 ccctgtttcgtgttcttgcgtcttttacacacgtttctgttttgaattggc 235  Q
    |||||||||| ||||||||||||||| |||| |||||||||||||||||||    
T  32160535 ccctgtttcgcgttcttgcgtctttttcacatgtttctgttttgaattggc 32160585  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 185 - 235
Target Start/End: Original strand, 36685582 - 36685632
Alignment:
Q  185 ccctgtttcgtgttcttgcgtcttttacacacgtttctgttttgaattggc 235  Q
    |||| |||| |||||||||||||||| ||||||||||||||||||||||||    
T  36685582 ccctatttcatgttcttgcgtctttttcacacgtttctgttttgaattggc 36685632  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 186 - 232
Target Start/End: Original strand, 45847159 - 45847205
Alignment:
Q  186 cctgtttcgtgttcttgcgtcttttacacacgtttctgttttgaatt 232  Q
    |||||||| |||||||||||||||| |||||||||||||||||||||    
T  45847159 cctgtttcatgttcttgcgtctttttcacacgtttctgttttgaatt 45847205  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 186 - 235
Target Start/End: Original strand, 832357 - 832406
Alignment:
Q  186 cctgtttcgtgttcttgcgtcttttacacacgtttctgttttgaattggc 235  Q
    |||||||| |||||||||||||||| |||||||||| |||||||||||||    
T  832357 cctgtttcatgttcttgcgtctttttcacacgtttcggttttgaattggc 832406  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 186 - 235
Target Start/End: Original strand, 1197537 - 1197586
Alignment:
Q  186 cctgtttcgtgttcttgcgtcttttacacacgtttctgttttgaattggc 235  Q
    |||||||| |||||||||||||||| |||||||||| |||||||||||||    
T  1197537 cctgtttcatgttcttgcgtctttttcacacgtttcggttttgaattggc 1197586  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 186 - 235
Target Start/End: Original strand, 13147806 - 13147855
Alignment:
Q  186 cctgtttcgtgttcttgcgtcttttacacacgtttctgttttgaattggc 235  Q
    |||||||| |||||||||||||||| ||||||||||| ||||||||||||    
T  13147806 cctgtttcatgttcttgcgtctttttcacacgtttctattttgaattggc 13147855  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 190 - 235
Target Start/End: Complemental strand, 14317785 - 14317740
Alignment:
Q  190 tttcgtgttcttgcgtcttttacacacgtttctgttttgaattggc 235  Q
    |||| |||||||||||||||| ||||||||||||||||||||||||    
T  14317785 tttcatgttcttgcgtctttttcacacgtttctgttttgaattggc 14317740  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 186 - 235
Target Start/End: Original strand, 15576167 - 15576216
Alignment:
Q  186 cctgtttcgtgttcttgcgtcttttacacacgtttctgttttgaattggc 235  Q
    |||||||| |||||||||||||||| |||||||||||||||| |||||||    
T  15576167 cctgtttcatgttcttgcgtctttttcacacgtttctgttttcaattggc 15576216  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 186 - 235
Target Start/End: Complemental strand, 20586070 - 20586021
Alignment:
Q  186 cctgtttcgtgttcttgcgtcttttacacacgtttctgttttgaattggc 235  Q
    |||||||| |||||||||||||||| ||||| ||||||||||||||||||    
T  20586070 cctgtttcatgttcttgcgtctttttcacacttttctgttttgaattggc 20586021  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 186 - 235
Target Start/End: Original strand, 43277077 - 43277126
Alignment:
Q  186 cctgtttcgtgttcttgcgtcttttacacacgtttctgttttgaattggc 235  Q
    |||||||| |||||||||||||||| |||||||||||||||| |||||||    
T  43277077 cctgtttcatgttcttgcgtctttttcacacgtttctgttttaaattggc 43277126  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 186 - 235
Target Start/End: Complemental strand, 44374664 - 44374615
Alignment:
Q  186 cctgtttcgtgttcttgcgtcttttacacacgtttctgttttgaattggc 235  Q
    |||||||| ||||||||| |||||| ||||||||||||||||||||||||    
T  44374664 cctgtttcatgttcttgcatctttttcacacgtttctgttttgaattggc 44374615  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 186 - 235
Target Start/End: Complemental strand, 44383529 - 44383480
Alignment:
Q  186 cctgtttcgtgttcttgcgtcttttacacacgtttctgttttgaattggc 235  Q
    |||||||| ||||||||| |||||| ||||||||||||||||||||||||    
T  44383529 cctgtttcatgttcttgcatctttttcacacgtttctgttttgaattggc 44383480  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 186 - 235
Target Start/End: Original strand, 48213279 - 48213328
Alignment:
Q  186 cctgtttcgtgttcttgcgtcttttacacacgtttctgttttgaattggc 235  Q
    |||||||| |||||||||||||||| ||||||||||| ||||||||||||    
T  48213279 cctgtttcatgttcttgcgtctttttcacacgtttctattttgaattggc 48213328  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #47
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 187 - 235
Target Start/End: Original strand, 8514081 - 8514129
Alignment:
Q  187 ctgtttcgtgttcttgcgtcttttacacacgtttctgttttgaattggc 235  Q
    ||||||| |||||||||||||||| ||| ||||||||||||||||||||    
T  8514081 ctgtttcatgttcttgcgtctttttcacccgtttctgttttgaattggc 8514129  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #48
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 186 - 234
Target Start/End: Complemental strand, 11303905 - 11303857
Alignment:
Q  186 cctgtttcgtgttcttgcgtcttttacacacgtttctgttttgaattgg 234  Q
    ||||||||| ||||||||||||||| |||| ||||||||||||||||||    
T  11303905 cctgtttcgcgttcttgcgtctttttcacatgtttctgttttgaattgg 11303857  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #49
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 186 - 234
Target Start/End: Original strand, 12323264 - 12323312
Alignment:
Q  186 cctgtttcgtgttcttgcgtcttttacacacgtttctgttttgaattgg 234  Q
    |||||||| ||||||||| |||||| |||||||||||||||||||||||    
T  12323264 cctgtttcatgttcttgcatctttttcacacgtttctgttttgaattgg 12323312  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #50
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 186 - 234
Target Start/End: Original strand, 23664457 - 23664505
Alignment:
Q  186 cctgtttcgtgttcttgcgtcttttacacacgtttctgttttgaattgg 234  Q
    ||||||||| ||||||||||||||| |||| ||||||||||||||||||    
T  23664457 cctgtttcgcgttcttgcgtctttttcacatgtttctgttttgaattgg 23664505  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #51
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 186 - 234
Target Start/End: Complemental strand, 29797268 - 29797220
Alignment:
Q  186 cctgtttcgtgttcttgcgtcttttacacacgtttctgttttgaattgg 234  Q
    ||||||||| ||||||||||||||| |||| ||||||||||||||||||    
T  29797268 cctgtttcgcgttcttgcgtctttttcacatgtttctgttttgaattgg 29797220  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #52
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 186 - 234
Target Start/End: Complemental strand, 29801087 - 29801039
Alignment:
Q  186 cctgtttcgtgttcttgcgtcttttacacacgtttctgttttgaattgg 234  Q
    ||||||||| ||||||||||||||| |||| ||||||||||||||||||    
T  29801087 cctgtttcgcgttcttgcgtctttttcacatgtttctgttttgaattgg 29801039  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #53
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 195 - 235
Target Start/End: Original strand, 32433932 - 32433972
Alignment:
Q  195 tgttcttgcgtcttttacacacgtttctgttttgaattggc 235  Q
    |||||||||||||||| ||||||||||||||||||||||||    
T  32433932 tgttcttgcgtctttttcacacgtttctgttttgaattggc 32433972  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #54
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 162 - 234
Target Start/End: Complemental strand, 33059910 - 33059838
Alignment:
Q  162 gcgaaatgttcagtggcagactgccctgtttcgtgttcttgcgtcttttacacacgtttctgttttgaattgg 234  Q
    ||||| ||||||||||||| ||||||||||||| |||| || |||| || |||||||||||||| ||| ||||    
T  33059910 gcgaattgttcagtggcagcctgccctgtttcgcgttcctgtgtctgtttcacacgtttctgttctgagttgg 33059838  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #55
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 187 - 235
Target Start/End: Complemental strand, 37539125 - 37539077
Alignment:
Q  187 ctgtttcgtgttcttgcgtcttttacacacgtttctgttttgaattggc 235  Q
    ||||||| |||||||| ||||||| ||||||||||||||||||||||||    
T  37539125 ctgtttcatgttcttgggtctttttcacacgtttctgttttgaattggc 37539077  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #56
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 155 - 235
Target Start/End: Complemental strand, 38295033 - 38294953
Alignment:
Q  155 tcgccttgcgaaatgttcagtggcagactgccctgtttcgtgttcttgcgtcttttacacacgtttctgttttgaattggc 235  Q
    |||||||||||  ||||||||||||| ||||||||||||   || |||||||| || |||| ||||||||||||| |||||    
T  38295033 tcgccttgcgagttgttcagtggcagtctgccctgtttcacatttttgcgtctgtttcacatgtttctgttttgagttggc 38294953  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #57
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 155 - 234
Target Start/End: Original strand, 13316663 - 13316742
Alignment:
Q  155 tcgccttgcgaaatgttcagtggcagactgccctgtttcgtgttcttgcgtcttttacacacgtttctgttttgaattgg 234  Q
    |||||| ||||  |||||| |||||| ||||||||||||| || |||| |||| || |||||||||||||||||| ||||    
T  13316663 tcgcctcgcgagttgttcattggcagcctgccctgtttcgcgtacttgtgtctgtttcacacgtttctgttttgagttgg 13316742  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #58
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 185 - 235
Target Start/End: Original strand, 17070625 - 17070676
Alignment:
Q  185 ccctgtttcgtgttcttgcgtctttta-cacacgtttctgttttgaattggc 235  Q
    |||||||||| |||||||||||||||  ||||||||||||||||||||||||    
T  17070625 ccctgtttcgcgttcttgcgtcttttttcacacgtttctgttttgaattggc 17070676  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #59
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 188 - 235
Target Start/End: Original strand, 24270318 - 24270365
Alignment:
Q  188 tgtttcgtgttcttgcgtcttttacacacgtttctgttttgaattggc 235  Q
    |||||| |||||||||||||||| ||||||||| ||||||||||||||    
T  24270318 tgtttcatgttcttgcgtctttttcacacgtttatgttttgaattggc 24270365  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #60
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 188 - 235
Target Start/End: Complemental strand, 32301898 - 32301851
Alignment:
Q  188 tgtttcgtgttcttgcgtcttttacacacgtttctgttttgaattggc 235  Q
    |||||| |||||||||||||||| ||||| ||||||||||||||||||    
T  32301898 tgtttcatgttcttgcgtctttttcacacatttctgttttgaattggc 32301851  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #61
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 185 - 235
Target Start/End: Original strand, 13917906 - 13917956
Alignment:
Q  185 ccctgtttcgtgttcttgcgtcttttacacacgtttctgttttgaattggc 235  Q
    |||||||||| | |||||| |||||| ||||||||||||||||||||||||    
T  13917906 ccctgtttcgcggtcttgcttctttttcacacgtttctgttttgaattggc 13917956  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #62
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 185 - 235
Target Start/End: Original strand, 14415817 - 14415867
Alignment:
Q  185 ccctgtttcgtgttcttgcgtcttttacacacgtttctgttttgaattggc 235  Q
    ||||||||  |||||||||||||||| ||||||||||| ||||||||||||    
T  14415817 ccctgttttatgttcttgcgtctttttcacacgtttctattttgaattggc 14415867  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #63
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 186 - 232
Target Start/End: Original strand, 16460327 - 16460373
Alignment:
Q  186 cctgtttcgtgttcttgcgtcttttacacacgtttctgttttgaatt 232  Q
    |||||||| |||||||||||||||| |||||||||| ||||||||||    
T  16460327 cctgtttcatgttcttgcgtctttttcacacgtttcggttttgaatt 16460373  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #64
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 185 - 235
Target Start/End: Original strand, 16550337 - 16550387
Alignment:
Q  185 ccctgtttcgtgttcttgcgtcttttacacacgtttctgttttgaattggc 235  Q
    |||||||||  ||||||||||||||| ||||||||| ||||||||||||||    
T  16550337 ccctgtttcacgttcttgcgtctttttcacacgtttttgttttgaattggc 16550387  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #65
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 186 - 232
Target Start/End: Complemental strand, 16580378 - 16580332
Alignment:
Q  186 cctgtttcgtgttcttgcgtcttttacacacgtttctgttttgaatt 232  Q
    |||||||| |||||||||||||||| ||||||||||||| |||||||    
T  16580378 cctgtttcatgttcttgcgtctttttcacacgtttctgtcttgaatt 16580332  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #66
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 185 - 235
Target Start/End: Complemental strand, 16615325 - 16615275
Alignment:
Q  185 ccctgtttcgtgttcttgcgtcttttacacacgtttctgttttgaattggc 235  Q
    |||||||||  ||||||||||||||| ||||||||| ||||||||||||||    
T  16615325 ccctgtttcacgttcttgcgtctttttcacacgtttttgttttgaattggc 16615275  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #67
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 185 - 235
Target Start/End: Complemental strand, 19194870 - 19194820
Alignment:
Q  185 ccctgtttcgtgttcttgcgtcttttacacacgtttctgttttgaattggc 235  Q
    ||||||||  |||||||||||||||| |||||||||| |||||||||||||    
T  19194870 ccctgttttatgttcttgcgtctttttcacacgtttcggttttgaattggc 19194820  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #68
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 186 - 232
Target Start/End: Complemental strand, 27217518 - 27217472
Alignment:
Q  186 cctgtttcgtgttcttgcgtcttttacacacgtttctgttttgaatt 232  Q
    |||||||| |||||||||||||||| || ||||||||||||||||||    
T  27217518 cctgtttcatgttcttgcgtctttttcatacgtttctgttttgaatt 27217472  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #69
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 185 - 235
Target Start/End: Original strand, 39431561 - 39431611
Alignment:
Q  185 ccctgtttcgtgttcttgcgtcttttacacacgtttctgttttgaattggc 235  Q
    ||||||||  |||||||||||||||| ||||||||| ||||||||||||||    
T  39431561 ccctgttttatgttcttgcgtctttttcacacgtttatgttttgaattggc 39431611  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #70
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 190 - 235
Target Start/End: Complemental strand, 148132 - 148087
Alignment:
Q  190 tttcgtgttcttgcgtcttttacacacgtttctgttttgaattggc 235  Q
    ||||| ||||||| ||||||| ||||||||||||||||||||||||    
T  148132 tttcgcgttcttgtgtctttttcacacgtttctgttttgaattggc 148087  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #71
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 190 - 235
Target Start/End: Original strand, 10896332 - 10896377
Alignment:
Q  190 tttcgtgttcttgcgtcttttacacacgtttctgttttgaattggc 235  Q
    ||||| ||||||| ||||||| ||||||||||||||||||||||||    
T  10896332 tttcgcgttcttgtgtctttttcacacgtttctgttttgaattggc 10896377  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #72
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 185 - 234
Target Start/End: Original strand, 14188627 - 14188676
Alignment:
Q  185 ccctgtttcgtgttcttgcgtcttttacacacgtttctgttttgaattgg 234  Q
    |||||||||| ||| ||||||||||| ||||||||||| |||||||||||    
T  14188627 ccctgtttcgcgtttttgcgtctttttcacacgtttcttttttgaattgg 14188676  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #73
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 190 - 235
Target Start/End: Complemental strand, 14422499 - 14422454
Alignment:
Q  190 tttcgtgttcttgcgtcttttacacacgtttctgttttgaattggc 235  Q
    ||||| ||||||| ||||||| ||||||||||||||||||||||||    
T  14422499 tttcgcgttcttgtgtctttttcacacgtttctgttttgaattggc 14422454  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #74
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 190 - 235
Target Start/End: Complemental strand, 14566716 - 14566671
Alignment:
Q  190 tttcgtgttcttgcgtcttttacacacgtttctgttttgaattggc 235  Q
    ||||| ||||||| ||||||| ||||||||||||||||||||||||    
T  14566716 tttcgcgttcttgtgtctttttcacacgtttctgttttgaattggc 14566671  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #75
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 195 - 232
Target Start/End: Complemental strand, 16233169 - 16233132
Alignment:
Q  195 tgttcttgcgtcttttacacacgtttctgttttgaatt 232  Q
    |||||||||||||||| |||||||||||||||||||||    
T  16233169 tgttcttgcgtctttttcacacgtttctgttttgaatt 16233132  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #76
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 190 - 235
Target Start/End: Complemental strand, 18872874 - 18872829
Alignment:
Q  190 tttcgtgttcttgcgtcttttacacacgtttctgttttgaattggc 235  Q
    ||||| ||||||| ||||||| ||||||||||||||||||||||||    
T  18872874 tttcgcgttcttgtgtctttttcacacgtttctgttttgaattggc 18872829  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #77
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 185 - 233
Target Start/End: Original strand, 8563924 - 8563972
Alignment:
Q  185 ccctgtttcgtgttcttgcgtcttttacacacgtttctgttttgaattg 233  Q
    |||||||||| ||||| ||||||||| ||||||||||| ||||||||||    
T  8563924 ccctgtttcgggttctcgcgtctttttcacacgtttctattttgaattg 8563972  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #78
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 188 - 232
Target Start/End: Original strand, 11392806 - 11392850
Alignment:
Q  188 tgtttcgtgttcttgcgtcttttacacacgtttctgttttgaatt 232  Q
    |||||| |||||||||||||||| ||||||||||| |||||||||    
T  11392806 tgtttcatgttcttgcgtctttttcacacgtttctattttgaatt 11392850  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #79
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 187 - 235
Target Start/End: Original strand, 13745111 - 13745159
Alignment:
Q  187 ctgtttcgtgttcttgcgtcttttacacacgtttctgttttgaattggc 235  Q
    ||||||| |||||||| ||||||| ||||||||||||||||||| ||||    
T  13745111 ctgtttcatgttcttgtgtctttttcacacgtttctgttttgaactggc 13745159  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #80
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 190 - 234
Target Start/End: Complemental strand, 15167689 - 15167645
Alignment:
Q  190 tttcgtgttcttgcgtcttttacacacgtttctgttttgaattgg 234  Q
    ||||| ||||||| ||||||| |||||||||||||||||||||||    
T  15167689 tttcgcgttcttgtgtctttttcacacgtttctgttttgaattgg 15167645  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #81
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 185 - 229
Target Start/End: Complemental strand, 15214218 - 15214174
Alignment:
Q  185 ccctgtttcgtgttcttgcgtcttttacacacgtttctgttttga 229  Q
    ||||||||| ||||||||| |||||| ||||||||||||||||||    
T  15214218 ccctgtttcatgttcttgcatctttttcacacgtttctgttttga 15214174  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #82
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 190 - 234
Target Start/End: Original strand, 16108197 - 16108241
Alignment:
Q  190 tttcgtgttcttgcgtcttttacacacgtttctgttttgaattgg 234  Q
    ||||| ||||||||||||||| |||| ||||||||||||||||||    
T  16108197 tttcgcgttcttgcgtctttttcacatgtttctgttttgaattgg 16108241  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #83
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 195 - 235
Target Start/End: Complemental strand, 16462745 - 16462705
Alignment:
Q  195 tgttcttgcgtcttttacacacgtttctgttttgaattggc 235  Q
    |||||||| ||||||| ||||||||||||||||||||||||    
T  16462745 tgttcttgtgtctttttcacacgtttctgttttgaattggc 16462705  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #84
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 185 - 229
Target Start/End: Original strand, 18985065 - 18985109
Alignment:
Q  185 ccctgtttcgtgttcttgcgtcttttacacacgtttctgttttga 229  Q
    |||||||| ||||||||||||||||| ||||| ||||||||||||    
T  18985065 ccctgttttgtgttcttgcgtctttttcacacatttctgttttga 18985109  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #85
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 185 - 229
Target Start/End: Original strand, 18999693 - 18999737
Alignment:
Q  185 ccctgtttcgtgttcttgcgtcttttacacacgtttctgttttga 229  Q
    |||||||| ||||||||||||||||| ||||| ||||||||||||    
T  18999693 ccctgttttgtgttcttgcgtctttttcacacatttctgttttga 18999737  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #86
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 186 - 234
Target Start/End: Complemental strand, 19282810 - 19282762
Alignment:
Q  186 cctgtttcgtgttcttgcgtcttttacacacgtttctgttttgaattgg 234  Q
    |||||||| ||||||||| |||||| |||| ||||||||||||||||||    
T  19282810 cctgtttcatgttcttgcatctttttcacatgtttctgttttgaattgg 19282762  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #87
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 188 - 232
Target Start/End: Complemental strand, 20488096 - 20488052
Alignment:
Q  188 tgtttcgtgttcttgcgtcttttacacacgtttctgttttgaatt 232  Q
    |||||| |||||||||||||||| ||||||||||| |||||||||    
T  20488096 tgtttcatgttcttgcgtctttttcacacgtttctcttttgaatt 20488052  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #88
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 187 - 235
Target Start/End: Complemental strand, 25942154 - 25942106
Alignment:
Q  187 ctgtttcgtgttcttgcgtcttttacacacgtttctgttttgaattggc 235  Q
    ||||||| |||| ||| ||||||| ||||||||||||||||||||||||    
T  25942154 ctgtttcatgtttttgtgtctttttcacacgtttctgttttgaattggc 25942106  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #89
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 188 - 232
Target Start/End: Complemental strand, 32126146 - 32126102
Alignment:
Q  188 tgtttcgtgttcttgcgtcttttacacacgtttctgttttgaatt 232  Q
    |||||| |||||||||||||| | |||||||||||||||||||||    
T  32126146 tgtttcatgttcttgcgtcttgttcacacgtttctgttttgaatt 32126102  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #90
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 195 - 235
Target Start/End: Original strand, 44190592 - 44190632
Alignment:
Q  195 tgttcttgcgtcttttacacacgtttctgttttgaattggc 235  Q
    |||| ||||||||||| ||||||||||||||||||||||||    
T  44190592 tgttattgcgtctttttcacacgtttctgttttgaattggc 44190632  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #91
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 187 - 230
Target Start/End: Original strand, 14948628 - 14948671
Alignment:
Q  187 ctgtttcgtgttcttgcgtcttttacacacgtttctgttttgaa 230  Q
    ||||||| |||||||||||||||| |||||||||| ||||||||    
T  14948628 ctgtttcatgttcttgcgtcttttgcacacgtttccgttttgaa 14948671  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #92
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 196 - 235
Target Start/End: Complemental strand, 16009086 - 16009047
Alignment:
Q  196 gttcttgcgtcttttacacacgtttctgttttgaattggc 235  Q
    ||||||| ||||||| ||||||||||||||||||||||||    
T  16009086 gttcttgtgtctttttcacacgtttctgttttgaattggc 16009047  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #93
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 187 - 230
Target Start/End: Complemental strand, 41523574 - 41523531
Alignment:
Q  187 ctgtttcgtgttcttgcgtcttttacacacgtttctgttttgaa 230  Q
    ||||||| |||||||||||||||| |||||||||| ||||||||    
T  41523574 ctgtttcatgttcttgcgtctttttcacacgtttccgttttgaa 41523531  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #94
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 187 - 230
Target Start/End: Complemental strand, 41526036 - 41525993
Alignment:
Q  187 ctgtttcgtgttcttgcgtcttttacacacgtttctgttttgaa 230  Q
    ||||||| |||||||||||||||| |||||||||| ||||||||    
T  41526036 ctgtttcatgttcttgcgtctttttcacacgtttccgttttgaa 41525993  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #95
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 185 - 235
Target Start/End: Original strand, 708888 - 708938
Alignment:
Q  185 ccctgtttcgtgttcttgcgtcttttacacacgtttctgttttgaattggc 235  Q
    ||||||||  |||||||||||||||| |||||||||||||| ||| |||||    
T  708888 ccctgttttatgttcttgcgtctttttcacacgtttctgttatgatttggc 708938  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #96
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 186 - 232
Target Start/End: Original strand, 4691230 - 4691276
Alignment:
Q  186 cctgtttcgtgttcttgcgtcttttacacacgtttctgttttgaatt 232  Q
    |||||||| |||| ||||||||||| || ||||||||||||||||||    
T  4691230 cctgtttcatgtttttgcgtctttttcatacgtttctgttttgaatt 4691276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #97
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 185 - 227
Target Start/End: Original strand, 12755039 - 12755081
Alignment:
Q  185 ccctgtttcgtgttcttgcgtcttttacacacgtttctgtttt 227  Q
    |||| |||| |||||||||||||||| ||||||||||||||||    
T  12755039 ccctatttcatgttcttgcgtctttttcacacgtttctgtttt 12755081  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #98
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 185 - 235
Target Start/End: Complemental strand, 13647961 - 13647911
Alignment:
Q  185 ccctgtttcgtgttcttgcgtcttttacacacgtttctgttttgaattggc 235  Q
    ||||||||  |||||||| ||||||| |||||||||||||||| |||||||    
T  13647961 ccctgttttatgttcttgtgtctttttcacacgtttctgttttcaattggc 13647911  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #99
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 186 - 232
Target Start/End: Original strand, 14161189 - 14161235
Alignment:
Q  186 cctgtttcgtgttcttgcgtcttttacacacgtttctgttttgaatt 232  Q
    ||||||||  |||||||| |||||| |||||||||||||||||||||    
T  14161189 cctgtttcacgttcttgcatctttttcacacgtttctgttttgaatt 14161235  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #100
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 186 - 232
Target Start/End: Complemental strand, 16410716 - 16410670
Alignment:
Q  186 cctgtttcgtgttcttgcgtcttttacacacgtttctgttttgaatt 232  Q
    ||||||||  |||||||| |||||| |||||||||||||||||||||    
T  16410716 cctgtttcacgttcttgcatctttttcacacgtttctgttttgaatt 16410670  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #101
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 188 - 233
Target Start/End: Complemental strand, 3137007 - 3136962
Alignment:
Q  188 tgtttcgtgttcttgcgtcttttacacacgtttctgttttgaattg 233  Q
    ||||||||||||||||||||||| ||||| ||| | ||||||||||    
T  3137007 tgtttcgtgttcttgcgtctttttcacacatttttcttttgaattg 3136962  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #102
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 186 - 235
Target Start/End: Complemental strand, 11067186 - 11067137
Alignment:
Q  186 cctgtttcgtgttcttgcgtcttttacacacgtttctgttttgaattggc 235  Q
    |||||||| ||||||||||| |||| |||| ||||||||||||| |||||    
T  11067186 cctgtttcatgttcttgcgtatttttcacatgtttctgttttgatttggc 11067137  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #103
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 186 - 235
Target Start/End: Original strand, 18875180 - 18875229
Alignment:
Q  186 cctgtttcgtgttcttgcgtcttttacacacgtttctgttttgaattggc 235  Q
    |||||||| ||||||||||||||||  |||| ||| ||||||||||||||    
T  18875180 cctgtttcatgttcttgcgtctttttaacacatttatgttttgaattggc 18875229  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #104
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 188 - 233
Target Start/End: Complemental strand, 32772044 - 32771999
Alignment:
Q  188 tgtttcgtgttcttgcgtcttttacacacgtttctgttttgaattg 233  Q
    |||||| |||||||| ||||||| || |||||||||||||||||||    
T  32772044 tgtttcatgttcttgtgtctttttcatacgtttctgttttgaattg 32771999  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #105
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 196 - 232
Target Start/End: Complemental strand, 11287118 - 11287082
Alignment:
Q  196 gttcttgcgtcttttacacacgtttctgttttgaatt 232  Q
    ||||||| ||||||| |||||||||||||||||||||    
T  11287118 gttcttgtgtctttttcacacgtttctgttttgaatt 11287082  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #106
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 188 - 232
Target Start/End: Complemental strand, 16999148 - 16999104
Alignment:
Q  188 tgtttcgtgttcttgcgtcttttacacacgtttctgttttgaatt 232  Q
    |||||| |||||||||||||||| || || |||||||||||||||    
T  16999148 tgtttcatgttcttgcgtctttttcatacatttctgttttgaatt 16999104  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #107
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 190 - 234
Target Start/End: Complemental strand, 18608001 - 18607957
Alignment:
Q  190 tttcgtgttcttgcgtcttttacacacgtttctgttttgaattgg 234  Q
    ||||| ||||||| ||||||| ||||||||| |||||||||||||    
T  18608001 tttcgcgttcttgtgtctttttcacacgtttttgttttgaattgg 18607957  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1783 (Bit Score: 150; Significance: 2e-79; HSPs: 1)
Name: scaffold1783
Description:

Target: scaffold1783; HSP #1
Raw Score: 150; E-Value: 2e-79
Query Start/End: Original strand, 3 - 235
Target Start/End: Complemental strand, 1161 - 918
Alignment:
Q  3 ggtgaaaaactgcagaattcacgtagtctggtctgtcgcgattcgccatggcggagagatatttcgcctggcggata-----------tattcaccattt 91  Q
    ||||||||||||||||||||  ||||| |||||||||||||| |||||||||||||||||||||||||||||| ||            | ||| ||||||    
T  1161 ggtgaaaaactgcagaattcgtgtagtatggtctgtcgcgatgcgccatggcggagagatatttcgcctggcgaatcattccagtagcttttcgccattt 1062  T
Q  92 cctcgccagtagttcgcctggcgaaacatcatagtagccactcgccttgagctcgccattaattcgccttgcgaaatgttcagtggcagactgccctgtt 191  Q
    ||| |||||||||| |||||||||||||||| ||||||||||| ||||||||||||||||| ||||||| ||||||||||||||||||||||||||||||    
T  1061 ccttgccagtagttagcctggcgaaacatcacagtagccactcaccttgagctcgccattagttcgcctggcgaaatgttcagtggcagactgccctgtt 962  T
Q  192 tcgtgttcttgcgtcttttacacacgtttctgttttgaattggc 235  Q
    ||||||||||||||||||||||||||||||||||||||||||||    
T  961 tcgtgttcttgcgtcttttacacacgtttctgttttgaattggc 918  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 141; Significance: 5e-74; HSPs: 102)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 141; E-Value: 5e-74
Query Start/End: Original strand, 3 - 235
Target Start/End: Original strand, 1988372 - 1988615
Alignment:
Q  3 ggtgaaaaactgcagaattcacgtagtctggtctgtcgcgattcgccatggcggagagatatttcgcctggcggat-ata----------ttcaccattt 91  Q
    ||||||||||||||||||||||||| |||||||||||||||||||||| |||||| |||| ||||||||||| ||| |||          ||| ||||||    
T  1988372 ggtgaaaaactgcagaattcacgtaatctggtctgtcgcgattcgccacggcggaaagatgtttcgcctggcagatcataccagtagcttttctccattt 1988471  T
Q  92 cctcgccagtagttcgcctggcgaaacatcatagtagccactcgccttgagctcgccattaattcgccttgcgaaatgttcagtggcagactgccctgtt 191  Q
    |||||||| |||||||||||| ||||||||| ||||||||||||||||||||||||||||| || |||| |||||||||| ||||||||||| |||||||    
T  1988472 cctcgccattagttcgcctggagaaacatcacagtagccactcgccttgagctcgccattagtttgcctggcgaaatgtttagtggcagactaccctgtt 1988571  T
Q  192 tcgtgttcttgcgtcttttacacacgtttctgttttgaattggc 235  Q
    |||||||||||||||||||| |||||||||||||||||||||||    
T  1988572 tcgtgttcttgcgtcttttagacacgtttctgttttgaattggc 1988615  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 62; E-Value: 6e-27
Query Start/End: Original strand, 157 - 234
Target Start/End: Original strand, 8927970 - 8928047
Alignment:
Q  157 gccttgcgaaatgttcagtggcagactgccctgtttcgtgttcttgcgtcttttacacacgtttctgttttgaattgg 234  Q
    |||| ||||||||||||||||||||||||||| ||||||||||||||||||||| |||| ||||||||||||||||||    
T  8927970 gcctggcgaaatgttcagtggcagactgccctatttcgtgttcttgcgtctttttcacatgtttctgttttgaattgg 8928047  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 3 - 74
Target Start/End: Original strand, 8927794 - 8927865
Alignment:
Q  3 ggtgaaaaactgcagaattcacgtagtctggtctgtcgcgattcgccatggcggagagatatttcgcctggc 74  Q
    ||||||||||||||||||||||||||||||||||||||||| ||||||||||||| | ||||||||||||||    
T  8927794 ggtgaaaaactgcagaattcacgtagtctggtctgtcgcgactcgccatggcggaaacatatttcgcctggc 8927865  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 154 - 234
Target Start/End: Complemental strand, 6156455 - 6156375
Alignment:
Q  154 ttcgccttgcgaaatgttcagtggcagactgccctgtttcgtgttcttgcgtcttttacacacgtttctgttttgaattgg 234  Q
    ||||||| |||||||||||| || |||||||| ||||||||||||||||||||| || | |||||||||||||||||||||    
T  6156455 ttcgcctagcgaaatgttcaatgacagactgctctgtttcgtgttcttgcgtctgtttcgcacgtttctgttttgaattgg 6156375  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 157 - 229
Target Start/End: Original strand, 48044052 - 48044124
Alignment:
Q  157 gccttgcgaaatgttcagtggcagactgccctgtttcgtgttcttgcgtcttttacacacgtttctgttttga 229  Q
    |||| ||||||||||||||||| ||||||||||||||| |||||||||||| || ||||||||||||||||||    
T  48044052 gcctggcgaaatgttcagtggcggactgccctgtttcgcgttcttgcgtctgtttcacacgtttctgttttga 48044124  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 153 - 234
Target Start/End: Original strand, 21845984 - 21846065
Alignment:
Q  153 attcgccttgcgaaatgttcagtggcagactgccctgtttcgtgttcttgcgtcttttacacacgtttctgttttgaattgg 234  Q
    |||||||| ||||||||||||||| ||||||||| ||||||  |||||||||||| || |||||||||||||||||| ||||    
T  21845984 attcgcctggcgaaatgttcagtgacagactgccttgtttcacgttcttgcgtctgtttcacacgtttctgttttgagttgg 21846065  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 154 - 229
Target Start/End: Complemental strand, 48630876 - 48630801
Alignment:
Q  154 ttcgccttgcgaaatgttcagtggcagactgccctgtttcgtgttcttgcgtcttttacacacgtttctgttttga 229  Q
    |||||||  |||| ||||||||||||||||||||||||||| |||||||| ||| || ||||||||||||||||||    
T  48630876 ttcgcctgacgaattgttcagtggcagactgccctgtttcgcgttcttgcatctgtttcacacgtttctgttttga 48630801  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 178 - 235
Target Start/End: Original strand, 54875809 - 54875866
Alignment:
Q  178 cagactgccctgtttcgtgttcttgcgtcttttacacacgtttctgttttgaattggc 235  Q
    |||| ||||||||||| |||||||||||||||| ||||||||||||||||||||||||    
T  54875809 cagaatgccctgtttcatgttcttgcgtctttttcacacgtttctgttttgaattggc 54875866  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 163 - 227
Target Start/End: Original strand, 3161232 - 3161296
Alignment:
Q  163 cgaaatgttcagtggcagactgccctgtttcgtgttcttgcgtcttttacacacgtttctgtttt 227  Q
    |||| ||||||||||||| ||||||||||||| |||||||||||| || ||||||||||||||||    
T  3161232 cgaattgttcagtggcagcctgccctgtttcgcgttcttgcgtctatttcacacgtttctgtttt 3161296  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 155 - 235
Target Start/End: Original strand, 3527781 - 3527861
Alignment:
Q  155 tcgccttgcgaaatgttcagtggcagactgccctgtttcgtgttcttgcgtcttttacacacgtttctgttttgaattggc 235  Q
    |||||| ||||  ||||||||||||| |||||||||||||||||||||||| | || ||||||||| |||||||| |||||    
T  3527781 tcgcctcgcgagttgttcagtggcagtctgccctgtttcgtgttcttgcgtgtgtttcacacgtttatgttttgagttggc 3527861  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 155 - 235
Target Start/End: Original strand, 12917937 - 12918017
Alignment:
Q  155 tcgccttgcgaaatgttcagtggcagactgccctgtttcgtgttcttgcgtcttttacacacgtttctgttttgaattggc 235  Q
    |||||| ||||  ||||||||||||| |||| |||||||| |||||||||||| || |||||||||||||||||| |||||    
T  12917937 tcgcctcgcgagttgttcagtggcagtctgctctgtttcgcgttcttgcgtctgtttcacacgtttctgttttgagttggc 12918017  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 155 - 234
Target Start/End: Original strand, 15025687 - 15025766
Alignment:
Q  155 tcgccttgcgaaatgttcagtggcagactgccctgtttcgtgttcttgcgtcttttacacacgtttctgttttgaattgg 234  Q
    |||||| ||||  ||||||||||||| ||||||| |||||| ||||||||||| || || ||||||||||||||||||||    
T  15025687 tcgcctcgcgagttgttcagtggcagcctgccctatttcgtattcttgcgtctgtttcatacgtttctgttttgaattgg 15025766  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 167 - 234
Target Start/End: Complemental strand, 25201604 - 25201537
Alignment:
Q  167 atgttcagtggcagactgccctgtttcgtgttcttgcgtcttttacacacgtttctgttttgaattgg 234  Q
    |||||||||||||||||||||||||||| |||||||||||  || ||||||||||| |||||| ||||    
T  25201604 atgttcagtggcagactgccctgtttcgcgttcttgcgtcagtttcacacgtttctattttgagttgg 25201537  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 185 - 235
Target Start/End: Complemental strand, 42246 - 42196
Alignment:
Q  185 ccctgtttcgtgttcttgcgtcttttacacacgtttctgttttgaattggc 235  Q
    |||| ||||||||||||||||||||| ||||||||||||||||||||||||    
T  42246 ccctatttcgtgttcttgcgtctttttcacacgtttctgttttgaattggc 42196  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 183 - 233
Target Start/End: Complemental strand, 6159118 - 6159068
Alignment:
Q  183 tgccctgtttcgtgttcttgcgtcttttacacacgtttctgttttgaattg 233  Q
    ||||||||||| |||||||||||||||| ||||||||||||||||||||||    
T  6159118 tgccctgtttcatgttcttgcgtctttttcacacgtttctgttttgaattg 6159068  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 185 - 235
Target Start/End: Original strand, 10833672 - 10833722
Alignment:
Q  185 ccctgtttcgtgttcttgcgtcttttacacacgtttctgttttgaattggc 235  Q
    |||||||||| ||||||||||||||| ||||||||||||||||||||||||    
T  10833672 ccctgtttcgcgttcttgcgtctttttcacacgtttctgttttgaattggc 10833722  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 185 - 235
Target Start/End: Complemental strand, 13520002 - 13519952
Alignment:
Q  185 ccctgtttcgtgttcttgcgtcttttacacacgtttctgttttgaattggc 235  Q
    ||||||||| |||||||||||||||| ||||||||||||||||||||||||    
T  13520002 ccctgtttcatgttcttgcgtctttttcacacgtttctgttttgaattggc 13519952  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 185 - 235
Target Start/End: Original strand, 14647436 - 14647486
Alignment:
Q  185 ccctgtttcgtgttcttgcgtcttttacacacgtttctgttttgaattggc 235  Q
    ||||||||| |||||||||||||||| ||||||||||||||||||||||||    
T  14647436 ccctgtttcatgttcttgcgtctttttcacacgtttctgttttgaattggc 14647486  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 185 - 235
Target Start/End: Original strand, 30123782 - 30123832
Alignment:
Q  185 ccctgtttcgtgttcttgcgtcttttacacacgtttctgttttgaattggc 235  Q
    ||||||||| |||||||||||||||| ||||||||||||||||||||||||    
T  30123782 ccctgtttcatgttcttgcgtctttttcacacgtttctgttttgaattggc 30123832  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 185 - 235
Target Start/End: Complemental strand, 54521481 - 54521431
Alignment:
Q  185 ccctgtttcgtgttcttgcgtcttttacacacgtttctgttttgaattggc 235  Q
    |||||||||| ||||||||||||||| ||||||||||||||||||||||||    
T  54521481 ccctgtttcgcgttcttgcgtctttttcacacgtttctgttttgaattggc 54521431  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 186 - 235
Target Start/End: Complemental strand, 40807714 - 40807665
Alignment:
Q  186 cctgtttcgtgttcttgcgtcttttacacacgtttctgttttgaattggc 235  Q
    |||||||| |||||||||||||||| ||||||||||||||||||||||||    
T  40807714 cctgtttcatgttcttgcgtctttttcacacgtttctgttttgaattggc 40807665  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 186 - 235
Target Start/End: Complemental strand, 40812551 - 40812502
Alignment:
Q  186 cctgtttcgtgttcttgcgtcttttacacacgtttctgttttgaattggc 235  Q
    |||||||| |||||||||||||||| ||||||||||||||||||||||||    
T  40812551 cctgtttcatgttcttgcgtctttttcacacgtttctgttttgaattggc 40812502  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 186 - 235
Target Start/End: Complemental strand, 44274137 - 44274088
Alignment:
Q  186 cctgtttcgtgttcttgcgtcttttacacacgtttctgttttgaattggc 235  Q
    |||||||| |||||||||||||||| ||||||||||||||||||||||||    
T  44274137 cctgtttcatgttcttgcgtctttttcacacgtttctgttttgaattggc 44274088  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 186 - 234
Target Start/End: Original strand, 5205988 - 5206036
Alignment:
Q  186 cctgtttcgtgttcttgcgtcttttacacacgtttctgttttgaattgg 234  Q
    |||||||| |||||||||||||||| |||||||||||||||||||||||    
T  5205988 cctgtttcatgttcttgcgtctttttcacacgtttctgttttgaattgg 5206036  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 183 - 235
Target Start/End: Complemental strand, 17208061 - 17208009
Alignment:
Q  183 tgccctgtttcgtgttcttgcgtcttttacacacgtttctgttttgaattggc 235  Q
    ||||||||||| ||||||||| |||||| ||||||||||||||||||||||||    
T  17208061 tgccctgtttcatgttcttgcatctttttcacacgtttctgttttgaattggc 17208009  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 183 - 235
Target Start/End: Original strand, 17670040 - 17670092
Alignment:
Q  183 tgccctgtttcgtgttcttgcgtcttttacacacgtttctgttttgaattggc 235  Q
    ||||||||||| |||||||||||||||| ||||||||| ||||||||||||||    
T  17670040 tgccctgtttcatgttcttgcgtctttttcacacgtttttgttttgaattggc 17670092  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 187 - 235
Target Start/End: Complemental strand, 24546557 - 24546509
Alignment:
Q  187 ctgtttcgtgttcttgcgtcttttacacacgtttctgttttgaattggc 235  Q
    ||||||| |||||||||||||||| ||||||||||||||||||||||||    
T  24546557 ctgtttcatgttcttgcgtctttttcacacgtttctgttttgaattggc 24546509  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 172 - 235
Target Start/End: Original strand, 43549997 - 43550060
Alignment:
Q  172 cagtggcagactgccctgtttcgtgttcttgcgtcttttacacacgtttctgttttgaattggc 235  Q
    |||||||||  | ||||||||  |||||||||||||||| ||||||||||||||||||||||||    
T  43549997 cagtggcagcataccctgttttatgttcttgcgtctttttcacacgtttctgttttgaattggc 43550060  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 189 - 235
Target Start/End: Complemental strand, 10563424 - 10563378
Alignment:
Q  189 gtttcgtgttcttgcgtcttttacacacgtttctgttttgaattggc 235  Q
    ||||| |||||||||||||||| ||||||||||||||||||||||||    
T  10563424 gtttcatgttcttgcgtcttttgcacacgtttctgttttgaattggc 10563378  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 185 - 235
Target Start/End: Original strand, 10989137 - 10989187
Alignment:
Q  185 ccctgtttcgtgttcttgcgtcttttacacacgtttctgttttgaattggc 235  Q
    ||||||||| ||||||| |||||||| ||||||||||||||||||||||||    
T  10989137 ccctgtttcatgttcttacgtctttttcacacgtttctgttttgaattggc 10989187  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 188 - 234
Target Start/End: Complemental strand, 12470518 - 12470472
Alignment:
Q  188 tgtttcgtgttcttgcgtcttttacacacgtttctgttttgaattgg 234  Q
    |||||| |||||||||||||||| |||||||||||||||||||||||    
T  12470518 tgtttcatgttcttgcgtcttttgcacacgtttctgttttgaattgg 12470472  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 186 - 232
Target Start/End: Complemental strand, 12511566 - 12511520
Alignment:
Q  186 cctgtttcgtgttcttgcgtcttttacacacgtttctgttttgaatt 232  Q
    |||||||| |||||||||||||||| |||||||||||||||||||||    
T  12511566 cctgtttcatgttcttgcgtctttttcacacgtttctgttttgaatt 12511520  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 185 - 235
Target Start/End: Complemental strand, 15465813 - 15465763
Alignment:
Q  185 ccctgtttcgtgttcttgcgtcttttacacacgtttctgttttgaattggc 235  Q
    |||||||||| |||||| |||||||| ||||||||||||||||||||||||    
T  15465813 ccctgtttcgcgttctttcgtctttttcacacgtttctgttttgaattggc 15465763  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 185 - 235
Target Start/End: Original strand, 16324874 - 16324924
Alignment:
Q  185 ccctgtttcgtgttcttgcgtcttttacacacgtttctgttttgaattggc 235  Q
    ||||||||||  |||||||||||||| ||||||||||||||||||||||||    
T  16324874 ccctgtttcgcattcttgcgtctttttcacacgtttctgttttgaattggc 16324924  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 186 - 232
Target Start/End: Complemental strand, 17463835 - 17463789
Alignment:
Q  186 cctgtttcgtgttcttgcgtcttttacacacgtttctgttttgaatt 232  Q
    |||||||| |||||||||||||||| |||||||||||||||||||||    
T  17463835 cctgtttcatgttcttgcgtctttttcacacgtttctgttttgaatt 17463789  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 186 - 232
Target Start/End: Complemental strand, 17693786 - 17693740
Alignment:
Q  186 cctgtttcgtgttcttgcgtcttttacacacgtttctgttttgaatt 232  Q
    |||||||| |||||||||||||||| |||||||||||||||||||||    
T  17693786 cctgtttcatgttcttgcgtctttttcacacgtttctgttttgaatt 17693740  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 186 - 232
Target Start/End: Complemental strand, 34159983 - 34159937
Alignment:
Q  186 cctgtttcgtgttcttgcgtcttttacacacgtttctgttttgaatt 232  Q
    |||||||| |||||||||||||||| |||||||||||||||||||||    
T  34159983 cctgtttcatgttcttgcgtctttttcacacgtttctgttttgaatt 34159937  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 189 - 235
Target Start/End: Complemental strand, 35354317 - 35354271
Alignment:
Q  189 gtttcgtgttcttgcgtcttttacacacgtttctgttttgaattggc 235  Q
    ||||| |||||||||||||||| ||||||||||||||||||||||||    
T  35354317 gtttcatgttcttgcgtctttttcacacgtttctgttttgaattggc 35354271  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 186 - 235
Target Start/End: Complemental strand, 5224041 - 5223992
Alignment:
Q  186 cctgtttcgtgttcttgcgtcttttacacacgtttctgttttgaattggc 235  Q
    ||||||||| ||||||||||||||| |||| |||||||||||||||||||    
T  5224041 cctgtttcgcgttcttgcgtctttttcacatgtttctgttttgaattggc 5223992  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 186 - 235
Target Start/End: Complemental strand, 13436956 - 13436907
Alignment:
Q  186 cctgtttcgtgttcttgcgtcttttacacacgtttctgttttgaattggc 235  Q
    ||||||||| ||||||||||||||| |||| |||||||||||||||||||    
T  13436956 cctgtttcgcgttcttgcgtctttttcacatgtttctgttttgaattggc 13436907  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 186 - 235
Target Start/End: Complemental strand, 17538824 - 17538775
Alignment:
Q  186 cctgtttcgtgttcttgcgtcttttacacacgtttctgttttgaattggc 235  Q
    |||||||| |||| ||||||||||| ||||||||||||||||||||||||    
T  17538824 cctgtttcatgttattgcgtctttttcacacgtttctgttttgaattggc 17538775  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 187 - 232
Target Start/End: Original strand, 28848127 - 28848172
Alignment:
Q  187 ctgtttcgtgttcttgcgtcttttacacacgtttctgttttgaatt 232  Q
    ||||||| |||||||||||||||| |||||||||||||||||||||    
T  28848127 ctgtttcatgttcttgcgtctttttcacacgtttctgttttgaatt 28848172  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 186 - 235
Target Start/End: Original strand, 35064915 - 35064964
Alignment:
Q  186 cctgtttcgtgttcttgcgtcttttacacacgtttctgttttgaattggc 235  Q
    |||||||| ||||||| |||||||| ||||||||||||||||||||||||    
T  35064915 cctgtttcatgttcttacgtctttttcacacgtttctgttttgaattggc 35064964  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 186 - 235
Target Start/End: Original strand, 41172705 - 41172753
Alignment:
Q  186 cctgtttcgtgttcttgcgtcttttacacacgtttctgttttgaattggc 235  Q
    |||||||| |||||||||||||||| ||||||||||||||||||||||||    
T  41172705 cctgtttcatgttcttgcgtctttt-cacacgtttctgttttgaattggc 41172753  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 186 - 235
Target Start/End: Original strand, 50348360 - 50348409
Alignment:
Q  186 cctgtttcgtgttcttgcgtcttttacacacgtttctgttttgaattggc 235  Q
    |||||||| |||||||||||||||| ||||||||||||||||| ||||||    
T  50348360 cctgtttcatgttcttgcgtctttttcacacgtttctgttttgtattggc 50348409  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 188 - 232
Target Start/End: Original strand, 10247230 - 10247274
Alignment:
Q  188 tgtttcgtgttcttgcgtcttttacacacgtttctgttttgaatt 232  Q
    |||||| |||||||||||||||| |||||||||||||||||||||    
T  10247230 tgtttcatgttcttgcgtctttttcacacgtttctgttttgaatt 10247274  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 186 - 234
Target Start/End: Complemental strand, 12305780 - 12305732
Alignment:
Q  186 cctgtttcgtgttcttgcgtcttttacacacgtttctgttttgaattgg 234  Q
    ||||||||| ||||||||||||||| |||| ||||||||||||||||||    
T  12305780 cctgtttcgcgttcttgcgtctttttcacatgtttctgttttgaattgg 12305732  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 187 - 235
Target Start/End: Original strand, 14152734 - 14152782
Alignment:
Q  187 ctgtttcgtgttcttgcgtcttttacacacgtttctgttttgaattggc 235  Q
    ||||||| ||||||||| |||||| ||||||||||||||||||||||||    
T  14152734 ctgtttcatgttcttgcatctttttcacacgtttctgttttgaattggc 14152782  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 195 - 235
Target Start/End: Original strand, 17519216 - 17519256
Alignment:
Q  195 tgttcttgcgtcttttacacacgtttctgttttgaattggc 235  Q
    |||||||||||||||| ||||||||||||||||||||||||    
T  17519216 tgttcttgcgtctttttcacacgtttctgttttgaattggc 17519256  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 195 - 235
Target Start/End: Original strand, 17534078 - 17534118
Alignment:
Q  195 tgttcttgcgtcttttacacacgtttctgttttgaattggc 235  Q
    |||||||||||||||| ||||||||||||||||||||||||    
T  17534078 tgttcttgcgtctttttcacacgtttctgttttgaattggc 17534118  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 183 - 235
Target Start/End: Original strand, 17685174 - 17685226
Alignment:
Q  183 tgccctgtttcgtgttcttgcgtcttttacacacgtttctgttttgaattggc 235  Q
    |||||||||||  |||||||| |||||| ||||||||||||||||||||||||    
T  17685174 tgccctgtttcaagttcttgcatctttttcacacgtttctgttttgaattggc 17685226  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #52
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 185 - 233
Target Start/End: Original strand, 31224286 - 31224334
Alignment:
Q  185 ccctgtttcgtgttcttgcgtcttttacacacgtttctgttttgaattg 233  Q
    ||||||||| |||||||||||||||| ||||||||| ||||||||||||    
T  31224286 ccctgtttcatgttcttgcgtctttttcacacgtttttgttttgaattg 31224334  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #53
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 188 - 232
Target Start/End: Original strand, 45606413 - 45606457
Alignment:
Q  188 tgtttcgtgttcttgcgtcttttacacacgtttctgttttgaatt 232  Q
    |||||| |||||||||||||||| |||||||||||||||||||||    
T  45606413 tgtttcatgttcttgcgtctttttcacacgtttctgttttgaatt 45606457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #54
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 188 - 232
Target Start/End: Complemental strand, 55477146 - 55477102
Alignment:
Q  188 tgtttcgtgttcttgcgtcttttacacacgtttctgttttgaatt 232  Q
    |||||| |||||||||||||||| |||||||||||||||||||||    
T  55477146 tgtttcatgttcttgcgtctttttcacacgtttctgttttgaatt 55477102  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #55
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 196 - 235
Target Start/End: Complemental strand, 5215355 - 5215316
Alignment:
Q  196 gttcttgcgtcttttacacacgtttctgttttgaattggc 235  Q
    ||||||||||||||| ||||||||||||||||||||||||    
T  5215355 gttcttgcgtctttttcacacgtttctgttttgaattggc 5215316  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #56
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 188 - 235
Target Start/End: Original strand, 43889135 - 43889182
Alignment:
Q  188 tgtttcgtgttcttgcgtcttttacacacgtttctgttttgaattggc 235  Q
    |||||| |||||||||||||||| |||| |||||||||||||||||||    
T  43889135 tgtttcatgttcttgcgtctttttcacatgtttctgttttgaattggc 43889182  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #57
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 186 - 232
Target Start/End: Original strand, 13151295 - 13151341
Alignment:
Q  186 cctgtttcgtgttcttgcgtcttttacacacgtttctgttttgaatt 232  Q
    |||||||| ||||||||| |||||| |||||||||||||||||||||    
T  13151295 cctgtttcatgttcttgcatctttttcacacgtttctgttttgaatt 13151341  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #58
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 186 - 232
Target Start/End: Original strand, 13153761 - 13153807
Alignment:
Q  186 cctgtttcgtgttcttgcgtcttttacacacgtttctgttttgaatt 232  Q
    |||||||| ||||||||| |||||| |||||||||||||||||||||    
T  13153761 cctgtttcatgttcttgcatctttttcacacgtttctgttttgaatt 13153807  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #59
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 183 - 233
Target Start/End: Complemental strand, 14519983 - 14519933
Alignment:
Q  183 tgccctgtttcgtgttcttgcgtcttttacacacgtttctgttttgaattg 233  Q
    ||||||||||| ||||||||| |||||  ||||||||||||||||||||||    
T  14519983 tgccctgtttcatgttcttgcatctttgtcacacgtttctgttttgaattg 14519933  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #60
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 186 - 232
Target Start/End: Complemental strand, 15413088 - 15413042
Alignment:
Q  186 cctgtttcgtgttcttgcgtcttttacacacgtttctgttttgaatt 232  Q
    |||||||| |||||||||||||||| ||||||||| |||||||||||    
T  15413088 cctgtttcatgttcttgcgtctttttcacacgtttttgttttgaatt 15413042  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #61
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 185 - 235
Target Start/End: Complemental strand, 16979629 - 16979579
Alignment:
Q  185 ccctgtttcgtgttcttgcgtcttttacacacgtttctgttttgaattggc 235  Q
    |||||||||| ||||||||||||||| ||||||||| | ||||||||||||    
T  16979629 ccctgtttcgcgttcttgcgtctttttcacacgtttatattttgaattggc 16979579  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #62
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 188 - 234
Target Start/End: Original strand, 22763966 - 22764012
Alignment:
Q  188 tgtttcgtgttcttgcgtcttttacacacgtttctgttttgaattgg 234  Q
    |||||| |||||||| ||||||| |||||||||||||||||||||||    
T  22763966 tgtttcatgttcttgtgtctttttcacacgtttctgttttgaattgg 22764012  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #63
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 189 - 235
Target Start/End: Original strand, 26054772 - 26054818
Alignment:
Q  189 gtttcgtgttcttgcgtcttttacacacgtttctgttttgaattggc 235  Q
    |||||| ||||||||||||||| |||||||||| |||||||||||||    
T  26054772 gtttcgcgttcttgcgtctttttcacacgtttcagttttgaattggc 26054818  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #64
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 186 - 235
Target Start/End: Complemental strand, 11259148 - 11259099
Alignment:
Q  186 cctgtttcgtgttcttgcgtcttttacacacgtttctgttttgaattggc 235  Q
    |||||||| |||  ||||||||||| ||||||||||||||||||||||||    
T  11259148 cctgtttcatgtgtttgcgtctttttcacacgtttctgttttgaattggc 11259099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #65
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 188 - 229
Target Start/End: Complemental strand, 11913437 - 11913396
Alignment:
Q  188 tgtttcgtgttcttgcgtcttttacacacgtttctgttttga 229  Q
    |||||| |||||||||||||||| ||||||||||||||||||    
T  11913437 tgtttcatgttcttgcgtctttttcacacgtttctgttttga 11913396  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #66
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 190 - 235
Target Start/End: Original strand, 14763299 - 14763344
Alignment:
Q  190 tttcgtgttcttgcgtcttttacacacgtttctgttttgaattggc 235  Q
    ||||| ||||||| ||||||| ||||||||||||||||||||||||    
T  14763299 tttcgcgttcttgtgtctttttcacacgtttctgttttgaattggc 14763344  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #67
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 186 - 235
Target Start/End: Complemental strand, 17044684 - 17044635
Alignment:
Q  186 cctgtttcgtgttcttgcgtcttttacacacgtttctgttttgaattggc 235  Q
    |||||||| |||||||  ||||||| ||||||||||||||||||||||||    
T  17044684 cctgtttcatgttcttctgtctttttcacacgtttctgttttgaattggc 17044635  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #68
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 190 - 235
Target Start/End: Original strand, 20248322 - 20248367
Alignment:
Q  190 tttcgtgttcttgcgtcttttacacacgtttctgttttgaattggc 235  Q
    ||||| ||||||| ||||||| ||||||||||||||||||||||||    
T  20248322 tttcgcgttcttgtgtctttttcacacgtttctgttttgaattggc 20248367  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #69
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 190 - 235
Target Start/End: Original strand, 38311341 - 38311386
Alignment:
Q  190 tttcgtgttcttgcgtcttttacacacgtttctgttttgaattggc 235  Q
    ||||| ||||||| ||||||| ||||||||||||||||||||||||    
T  38311341 tttcgcgttcttgtgtctttttcacacgtttctgttttgaattggc 38311386  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #70
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 183 - 235
Target Start/End: Complemental strand, 14441888 - 14441837
Alignment:
Q  183 tgccctgtttcgtgttcttgcgtcttttacacacgtttctgttttgaattggc 235  Q
    ||||||||||| ||| |||||||||||| ||||||||| ||||||||||||||    
T  14441888 tgccctgtttcatgt-cttgcgtctttttcacacgtttttgttttgaattggc 14441837  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #71
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 195 - 235
Target Start/End: Complemental strand, 14508556 - 14508516
Alignment:
Q  195 tgttcttgcgtcttttacacacgtttctgttttgaattggc 235  Q
    |||||||||||||||| ||||||||| ||||||||||||||    
T  14508556 tgttcttgcgtctttttcacacgtttatgttttgaattggc 14508516  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #72
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 185 - 233
Target Start/End: Complemental strand, 19444229 - 19444182
Alignment:
Q  185 ccctgtttcgtgttcttgcgtcttttacacacgtttctgttttgaattg 233  Q
    |||| |||| |||||||||||||||| ||||||||||||||||||||||    
T  19444229 ccctatttcatgttcttgcgtctttt-cacacgtttctgttttgaattg 19444182  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #73
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 190 - 234
Target Start/End: Complemental strand, 27840607 - 27840563
Alignment:
Q  190 tttcgtgttcttgcgtcttttacacacgtttctgttttgaattgg 234  Q
    ||||| ||||||| ||||||| |||||||||||||||||||||||    
T  27840607 tttcgcgttcttgtgtctttttcacacgtttctgttttgaattgg 27840563  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #74
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 186 - 234
Target Start/End: Original strand, 29544346 - 29544394
Alignment:
Q  186 cctgtttcgtgttcttgcgtcttttacacacgtttctgttttgaattgg 234  Q
    ||||||||| |||||||| |||||| |||| ||||||||||||||||||    
T  29544346 cctgtttcgcgttcttgcatctttttcacatgtttctgttttgaattgg 29544394  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #75
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 195 - 235
Target Start/End: Complemental strand, 43929060 - 43929020
Alignment:
Q  195 tgttcttgcgtcttttacacacgtttctgttttgaattggc 235  Q
    ||||||||||| |||| ||||||||||||||||||||||||    
T  43929060 tgttcttgcgtatttttcacacgtttctgttttgaattggc 43929020  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #76
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 195 - 235
Target Start/End: Complemental strand, 49900445 - 49900405
Alignment:
Q  195 tgttcttgcgtcttttacacacgtttctgttttgaattggc 235  Q
    |||||||||||||||| ||||||||||| ||||||||||||    
T  49900445 tgttcttgcgtctttttcacacgtttctattttgaattggc 49900405  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #77
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 190 - 234
Target Start/End: Original strand, 51158605 - 51158649
Alignment:
Q  190 tttcgtgttcttgcgtcttttacacacgtttctgttttgaattgg 234  Q
    ||||| ||||||| ||||||| |||||||||||||||||||||||    
T  51158605 tttcgcgttcttgtgtctttttcacacgtttctgttttgaattgg 51158649  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #78
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 187 - 230
Target Start/End: Complemental strand, 15978189 - 15978146
Alignment:
Q  187 ctgtttcgtgttcttgcgtcttttacacacgtttctgttttgaa 230  Q
    ||||||| |||||||||||||||| |||||||||| ||||||||    
T  15978189 ctgtttcatgttcttgcgtctttttcacacgtttccgttttgaa 15978146  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #79
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 184 - 235
Target Start/End: Complemental strand, 49231921 - 49231871
Alignment:
Q  184 gccctgtttcgtgttcttgcgtcttttacacacgtttctgttttgaattggc 235  Q
    ||||||||||||||||||||||||||| ||| |  |||||||||||||||||    
T  49231921 gccctgtttcgtgttcttgcgtctttttcac-ctattctgttttgaattggc 49231871  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #80
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 190 - 233
Target Start/End: Original strand, 50755720 - 50755763
Alignment:
Q  190 tttcgtgttcttgcgtcttttacacacgtttctgttttgaattg 233  Q
    |||| ||||||||| |||||| ||||||||||||||||||||||    
T  50755720 tttcatgttcttgcatctttttcacacgtttctgttttgaattg 50755763  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #81
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 187 - 229
Target Start/End: Original strand, 6468640 - 6468682
Alignment:
Q  187 ctgtttcgtgttcttgcgtcttttacacacgtttctgttttga 229  Q
    ||||||| ||||||| |||||||| ||||||||||||||||||    
T  6468640 ctgtttcatgttcttacgtctttttcacacgtttctgttttga 6468682  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #82
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 195 - 233
Target Start/End: Original strand, 6805304 - 6805342
Alignment:
Q  195 tgttcttgcgtcttttacacacgtttctgttttgaattg 233  Q
    |||||||||||||||| ||||||||| ||||||||||||    
T  6805304 tgttcttgcgtctttttcacacgtttttgttttgaattg 6805342  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #83
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 186 - 232
Target Start/End: Original strand, 10541792 - 10541838
Alignment:
Q  186 cctgtttcgtgttcttgcgtcttttacacacgtttctgttttgaatt 232  Q
    |||||||| |||||||||||||||| |||| ||||| ||||||||||    
T  10541792 cctgtttcatgttcttgcgtctttttcacatgtttccgttttgaatt 10541838  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #84
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 191 - 233
Target Start/End: Original strand, 14641889 - 14641931
Alignment:
Q  191 ttcgtgttcttgcgtcttttacacacgtttctgttttgaattg 233  Q
    |||||||||||||||||||| |||| ||||||||||| |||||    
T  14641889 ttcgtgttcttgcgtctttttcacatgtttctgtttttaattg 14641931  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #85
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 185 - 235
Target Start/End: Original strand, 25104537 - 25104587
Alignment:
Q  185 ccctgtttcgtgttcttgcgtcttttacacacgtttctgttttgaattggc 235  Q
    |||||||||  ||||||||||||||| ||| | ||||||||||||||||||    
T  25104537 ccctgtttcacgttcttgcgtcttttccacgcatttctgttttgaattggc 25104587  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #86
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 188 - 230
Target Start/End: Complemental strand, 33564845 - 33564803
Alignment:
Q  188 tgtttcgtgttcttgcgtcttttacacacgtttctgttttgaa 230  Q
    |||||| |||||||||||||||| |||||||||| ||||||||    
T  33564845 tgtttcatgttcttgcgtctttttcacacgtttccgttttgaa 33564803  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #87
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 188 - 230
Target Start/End: Original strand, 53646396 - 53646438
Alignment:
Q  188 tgtttcgtgttcttgcgtcttttacacacgtttctgttttgaa 230  Q
    |||||| |||||||||||||||| |||||||||| ||||||||    
T  53646396 tgtttcatgttcttgcgtctttttcacacgtttccgttttgaa 53646438  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #88
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 185 - 235
Target Start/End: Original strand, 55291974 - 55292024
Alignment:
Q  185 ccctgtttcgtgttcttgcgtcttttacacacgtttctgttttgaattggc 235  Q
    ||||||||  |||||||||||||||| |||| |||||| ||||||||||||    
T  55291974 ccctgttttatgttcttgcgtctttttcacaggtttctattttgaattggc 55292024  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #89
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 186 - 235
Target Start/End: Original strand, 2841797 - 2841846
Alignment:
Q  186 cctgtttcgtgttcttgcgtcttttacacacgtttctgttttgaattggc 235  Q
    |||||||| |||||||| ||||||| |||||  |||||||||||||||||    
T  2841797 cctgtttcatgttcttgtgtctttttcacacacttctgttttgaattggc 2841846  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #90
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 190 - 235
Target Start/End: Complemental strand, 3803549 - 3803504
Alignment:
Q  190 tttcgtgttcttgcgtcttttacacacgtttctgttttgaattggc 235  Q
    ||||| || |||||||||||| |||| |||||||||||||||||||    
T  3803549 tttcgcgtgcttgcgtctttttcacatgtttctgttttgaattggc 3803504  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #91
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 185 - 234
Target Start/End: Original strand, 8269319 - 8269368
Alignment:
Q  185 ccctgtttcgtgttcttgcgtcttttacacacgtttctgttttgaattgg 234  Q
    ||||||||||||||||||| |||||| |||   |||||||||||||||||    
T  8269319 ccctgtttcgtgttcttgcatctttttcacctatttctgttttgaattgg 8269368  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #92
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 185 - 234
Target Start/End: Original strand, 8276430 - 8276479
Alignment:
Q  185 ccctgtttcgtgttcttgcgtcttttacacacgtttctgttttgaattgg 234  Q
    ||||||||||||||||||| |||||| |||   |||||||||||||||||    
T  8276430 ccctgtttcgtgttcttgcatctttttcacctatttctgttttgaattgg 8276479  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #93
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 190 - 235
Target Start/End: Complemental strand, 9533843 - 9533798
Alignment:
Q  190 tttcgtgttcttgcgtcttttacacacgtttctgttttgaattggc 235  Q
    ||||| ||||||| ||||||| |||| |||||||||||||||||||    
T  9533843 tttcgcgttcttgtgtctttttcacatgtttctgttttgaattggc 9533798  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #94
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 185 - 234
Target Start/End: Complemental strand, 12808658 - 12808609
Alignment:
Q  185 ccctgtttcgtgttcttgcgtcttttacacacgtttctgttttgaattgg 234  Q
    |||||||||||||||||||||||||| |||   ||||||||| |||||||    
T  12808658 ccctgtttcgtgttcttgcgtctttttcacctatttctgtttcgaattgg 12808609  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #95
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 186 - 235
Target Start/End: Original strand, 15931841 - 15931890
Alignment:
Q  186 cctgtttcgtgttcttgcgtcttttacacacgtttctgttttgaattggc 235  Q
    |||||||| |||||||| |||||||  ||| |||||||||||||||||||    
T  15931841 cctgtttcatgttcttgtgtctttttaacatgtttctgttttgaattggc 15931890  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #96
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 185 - 234
Target Start/End: Complemental strand, 18739614 - 18739565
Alignment:
Q  185 ccctgtttcgtgttcttgcgtcttttacacacgtttctgttttgaattgg 234  Q
    |||||||||| ||||||||||||||| |||   |||||||||||||||||    
T  18739614 ccctgtttcgcgttcttgcgtctttttcacttatttctgttttgaattgg 18739565  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #97
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 196 - 233
Target Start/End: Original strand, 54330650 - 54330687
Alignment:
Q  196 gttcttgcgtcttttacacacgtttctgttttgaattg 233  Q
    ||||||||||||||| ||||||||| ||||||||||||    
T  54330650 gttcttgcgtctttttcacacgtttatgttttgaattg 54330687  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #98
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 188 - 232
Target Start/End: Original strand, 18699809 - 18699853
Alignment:
Q  188 tgtttcgtgttcttgcgtcttttacacacgtttctgttttgaatt 232  Q
    |||||| |||||||| ||||| | |||||||||||||||||||||    
T  18699809 tgtttcatgttcttgagtcttgttcacacgtttctgttttgaatt 18699853  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #99
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 168 - 232
Target Start/End: Complemental strand, 29907227 - 29907163
Alignment:
Q  168 tgttcagtggcagactgccctgtttcgtgttcttgcgtcttttacacacgtttctgttttgaatt 232  Q
    |||| ||| |||| ||| |||||||||||||||||||||| || || || ||||| |||||||||    
T  29907227 tgtttagtagcagtctgtcctgtttcgtgttcttgcgtctgtttcatacatttctattttgaatt 29907163  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #100
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 168 - 232
Target Start/End: Complemental strand, 29948393 - 29948329
Alignment:
Q  168 tgttcagtggcagactgccctgtttcgtgttcttgcgtcttttacacacgtttctgttttgaatt 232  Q
    |||| ||| |||| ||| |||||||||||||||||||||| || || || ||||| |||||||||    
T  29948393 tgtttagtagcagtctgtcctgtttcgtgttcttgcgtctgtttcatacatttctattttgaatt 29948329  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #101
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 168 - 232
Target Start/End: Complemental strand, 29997547 - 29997483
Alignment:
Q  168 tgttcagtggcagactgccctgtttcgtgttcttgcgtcttttacacacgtttctgttttgaatt 232  Q
    |||| ||| |||| ||| |||||||||||||||||||||| || || || ||||| |||||||||    
T  29997547 tgtttagtagcagtctgtcctgtttcgtgttcttgcgtctgtttcatacatttctattttgaatt 29997483  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #102
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 185 - 229
Target Start/End: Original strand, 51602933 - 51602977
Alignment:
Q  185 ccctgtttcgtgttcttgcgtcttttacacacgtttctgttttga 229  Q
    |||| |||| |||||||||| ||||| ||||||||||||||||||    
T  51602933 ccctatttcatgttcttgcgactttttcacacgtttctgttttga 51602977  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0338 (Bit Score: 138; Significance: 3e-72; HSPs: 2)
Name: scaffold0338
Description:

Target: scaffold0338; HSP #1
Raw Score: 138; E-Value: 3e-72
Query Start/End: Original strand, 3 - 235
Target Start/End: Original strand, 3082 - 3325
Alignment:
Q  3 ggtgaaaaactgcagaattcacgtagtctggtctgtcgcgattcgccatggcggagagatatttcgcctggcggatatattca-----------ccattt 91  Q
    ||||||||||||||||||| || |||| |||||| ||||||||| |||||||||||||||||||| ||||||||||   | ||           ||||||    
T  3082 ggtgaaaaactgcagaatttacatagtttggtctatcgcgattcaccatggcggagagatatttcacctggcggatcattccagtagcttttagccattt 3181  T
Q  92 cctcgccagtagttcgcctggcgaaacatcatagtagccactcgccttgagctcgccattaattcgccttgcgaaatgttcagtggcagactgccctgtt 191  Q
    |||||||||||||||||||||||||| |||| ||||||||||||||||||||||||||||| ||||||| ||||||||||||||||||||||||||||||    
T  3182 cctcgccagtagttcgcctggcgaaatatcacagtagccactcgccttgagctcgccattagttcgcctggcgaaatgttcagtggcagactgccctgtt 3281  T
Q  192 tcgtgttcttgcgtcttttacacacgtttctgttttgaattggc 235  Q
    ||||||||||||||||||| ||||| |||||||||| |||||||    
T  3282 tcgtgttcttgcgtctttttcacacatttctgttttaaattggc 3325  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0338; HSP #2
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 190 - 235
Target Start/End: Complemental strand, 8714 - 8669
Alignment:
Q  190 tttcgtgttcttgcgtcttttacacacgtttctgttttgaattggc 235  Q
    ||||| ||||||| ||||||| |||| |||||||||||||||||||    
T  8714 tttcgcgttcttgtgtctttttcacaagtttctgttttgaattggc 8669  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 138; Significance: 3e-72; HSPs: 68)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 138; E-Value: 3e-72
Query Start/End: Original strand, 3 - 235
Target Start/End: Original strand, 15816898 - 15817141
Alignment:
Q  3 ggtgaaaaactgcagaattcacgtagtctggtctgtcgcgattcgccatggcggagagatatttcgcctggcggatatattca-----------ccattt 91  Q
    ||||||||||||||||||| || |||| |||||| ||||||||| |||||||||||||||||||| ||||||||||   | ||           ||||||    
T  15816898 ggtgaaaaactgcagaatttacatagtttggtctatcgcgattcaccatggcggagagatatttcacctggcggatcattccagtagctttttgccattt 15816997  T
Q  92 cctcgccagtagttcgcctggcgaaacatcatagtagccactcgccttgagctcgccattaattcgccttgcgaaatgttcagtggcagactgccctgtt 191  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||  |||||| ||||||||||| |||||||||||    
T  15816998 cctcgccagtagttcgcctggcgaaacatcatagtagccactcgccttgagctcgccattagttcgcccggcgaaaagttcagtggcatactgccctgtt 15817097  T
Q  192 tcgtgttcttgcgtcttttacacacgtttctgttttgaattggc 235  Q
    |||| ||||||||||||||||||||||||||||| |||||||||    
T  15817098 tcgttttcttgcgtcttttacacacgtttctgttatgaattggc 15817141  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 81; E-Value: 3e-38
Query Start/End: Original strand, 3 - 150
Target Start/End: Complemental strand, 29266163 - 29266005
Alignment:
Q  3 ggtgaaaaactgcagaattcacgtagtctggtctgtcgcgattcgccatggcggagagatatttcgcctggcggat-----------atattcaccattt 91  Q
    |||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||            | ||| ||||||    
T  29266163 ggtgaaaaactgtagaattcacgtagtctggtctgtcgcgattcgccatggcggagagatatttcgcctggcggatcattccagtagcttttcgccattt 29266064  T
Q  92 cctcgccagtagttcgcctggcgaaacatcatagtagccactcgccttgagctcgccat 150  Q
    |||||||| |||||||||||||||||||||  ||||||||||| ||||  |||||||||    
T  29266063 cctcgccattagttcgcctggcgaaacatctcagtagccactcaccttttgctcgccat 29266005  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 3 - 78
Target Start/End: Original strand, 1590017 - 1590092
Alignment:
Q  3 ggtgaaaaactgcagaattcacgtagtctggtctgtcgcgattcgccatggcggagagatatttcgcctggcggat 78  Q
    |||||||||||||| |||||||||||||||||||||||||| ||| || |||||| ||||||||||||||||||||    
T  1590017 ggtgaaaaactgcaaaattcacgtagtctggtctgtcgcgactcggcagggcggaaagatatttcgcctggcggat 1590092  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 3 - 75
Target Start/End: Complemental strand, 1639773 - 1639701
Alignment:
Q  3 ggtgaaaaactgcagaattcacgtagtctggtctgtcgcgattcgccatggcggagagatatttcgcctggcg 75  Q
    |||||||||||||||||||||||||||||| |||||| ||| ||||||||||| |||| | ||||||||||||    
T  1639773 ggtgaaaaactgcagaattcacgtagtctgatctgtcacgactcgccatggcgaagagctttttcgcctggcg 1639701  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 185 - 235
Target Start/End: Original strand, 19825822 - 19825872
Alignment:
Q  185 ccctgtttcgtgttcttgcgtcttttacacacgtttctgttttgaattggc 235  Q
    |||||||||||||||||||||||||| ||||||||||||||||||||||||    
T  19825822 ccctgtttcgtgttcttgcgtctttttcacacgtttctgttttgaattggc 19825872  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 185 - 235
Target Start/End: Complemental strand, 19234804 - 19234754
Alignment:
Q  185 ccctgtttcgtgttcttgcgtcttttacacacgtttctgttttgaattggc 235  Q
    ||||||||| |||||||||||||||| ||||||||||||||||||||||||    
T  19234804 ccctgtttcatgttcttgcgtctttttcacacgtttctgttttgaattggc 19234754  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 185 - 235
Target Start/End: Complemental strand, 23415623 - 23415573
Alignment:
Q  185 ccctgtttcgtgttcttgcgtcttttacacacgtttctgttttgaattggc 235  Q
    |||||||||| ||||||||||||||| ||||||||||||||||||||||||    
T  23415623 ccctgtttcgcgttcttgcgtctttttcacacgtttctgttttgaattggc 23415573  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 185 - 235
Target Start/End: Complemental strand, 27557381 - 27557331
Alignment:
Q  185 ccctgtttcgtgttcttgcgtcttttacacacgtttctgttttgaattggc 235  Q
    |||||||||| ||||||||||||||| ||||||||||||||||||||||||    
T  27557381 ccctgtttcgcgttcttgcgtctttttcacacgtttctgttttgaattggc 27557331  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 185 - 235
Target Start/End: Complemental strand, 35057223 - 35057173
Alignment:
Q  185 ccctgtttcgtgttcttgcgtcttttacacacgtttctgttttgaattggc 235  Q
    ||||||||| |||||||||||||||| ||||||||||||||||||||||||    
T  35057223 ccctgtttcatgttcttgcgtctttttcacacgtttctgttttgaattggc 35057173  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 186 - 235
Target Start/End: Original strand, 27125810 - 27125859
Alignment:
Q  186 cctgtttcgtgttcttgcgtcttttacacacgtttctgttttgaattggc 235  Q
    |||||||| |||||||||||||||| ||||||||||||||||||||||||    
T  27125810 cctgtttcatgttcttgcgtctttttcacacgtttctgttttgaattggc 27125859  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 188 - 235
Target Start/End: Complemental strand, 22556965 - 22556918
Alignment:
Q  188 tgtttcgtgttcttgcgtcttttacacacgtttctgttttgaattggc 235  Q
    |||||| |||||||||||||||| ||||||||||||||||||||||||    
T  22556965 tgtttcatgttcttgcgtctttttcacacgtttctgttttgaattggc 22556918  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 186 - 232
Target Start/End: Original strand, 2290685 - 2290731
Alignment:
Q  186 cctgtttcgtgttcttgcgtcttttacacacgtttctgttttgaatt 232  Q
    |||||||| |||||||||||||||| |||||||||||||||||||||    
T  2290685 cctgtttcatgttcttgcgtctttttcacacgtttctgttttgaatt 2290731  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 185 - 235
Target Start/End: Original strand, 8759850 - 8759900
Alignment:
Q  185 ccctgtttcgtgttcttgcgtcttttacacacgtttctgttttgaattggc 235  Q
    |||| |||| |||||||||||||||| ||||||||||||||||||||||||    
T  8759850 ccctatttcatgttcttgcgtctttttcacacgtttctgttttgaattggc 8759900  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 186 - 232
Target Start/End: Original strand, 18334097 - 18334143
Alignment:
Q  186 cctgtttcgtgttcttgcgtcttttacacacgtttctgttttgaatt 232  Q
    |||||||| |||||||||||||||| |||||||||||||||||||||    
T  18334097 cctgtttcatgttcttgcgtctttttcacacgtttctgttttgaatt 18334143  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 185 - 235
Target Start/End: Complemental strand, 23956581 - 23956531
Alignment:
Q  185 ccctgtttcgtgttcttgcgtcttttacacacgtttctgttttgaattggc 235  Q
    |||| ||||| ||||||||||||||| ||||||||||||||||||||||||    
T  23956581 ccctatttcgcgttcttgcgtctttttcacacgtttctgttttgaattggc 23956531  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 186 - 232
Target Start/End: Complemental strand, 24423204 - 24423158
Alignment:
Q  186 cctgtttcgtgttcttgcgtcttttacacacgtttctgttttgaatt 232  Q
    |||||||| |||||||||||||||| |||||||||||||||||||||    
T  24423204 cctgtttcatgttcttgcgtctttttcacacgtttctgttttgaatt 24423158  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 186 - 232
Target Start/End: Complemental strand, 33864935 - 33864889
Alignment:
Q  186 cctgtttcgtgttcttgcgtcttttacacacgtttctgttttgaatt 232  Q
    |||||||| |||||||||||||||| |||||||||||||||||||||    
T  33864935 cctgtttcatgttcttgcgtctttttcacacgtttctgttttgaatt 33864889  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 186 - 235
Target Start/End: Original strand, 15891045 - 15891094
Alignment:
Q  186 cctgtttcgtgttcttgcgtcttttacacacgtttctgttttgaattggc 235  Q
    |||||||| ||||||||| |||||| ||||||||||||||||||||||||    
T  15891045 cctgtttcatgttcttgcatctttttcacacgtttctgttttgaattggc 15891094  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 186 - 235
Target Start/End: Complemental strand, 18703282 - 18703233
Alignment:
Q  186 cctgtttcgtgttcttgcgtcttttacacacgtttctgttttgaattggc 235  Q
    |||||||| |||| ||||||||||| ||||||||||||||||||||||||    
T  18703282 cctgtttcatgtttttgcgtctttttcacacgtttctgttttgaattggc 18703233  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 186 - 235
Target Start/End: Complemental strand, 18709217 - 18709168
Alignment:
Q  186 cctgtttcgtgttcttgcgtcttttacacacgtttctgttttgaattggc 235  Q
    |||||||| |||| ||||||||||| ||||||||||||||||||||||||    
T  18709217 cctgtttcatgtttttgcgtctttttcacacgtttctgttttgaattggc 18709168  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 186 - 235
Target Start/End: Complemental strand, 19008928 - 19008879
Alignment:
Q  186 cctgtttcgtgttcttgcgtcttttacacacgtttctgttttgaattggc 235  Q
    |||||||| ||||||||| |||||| ||||||||||||||||||||||||    
T  19008928 cctgtttcatgttcttgcatctttttcacacgtttctgttttgaattggc 19008879  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 186 - 235
Target Start/End: Original strand, 19655563 - 19655612
Alignment:
Q  186 cctgtttcgtgttcttgcgtcttttacacacgtttctgttttgaattggc 235  Q
    |||||||| ||||||||||||||||  |||||||||||||||||||||||    
T  19655563 cctgtttcatgttcttgcgtctttttaacacgtttctgttttgaattggc 19655612  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 186 - 235
Target Start/End: Original strand, 19773043 - 19773092
Alignment:
Q  186 cctgtttcgtgttcttgcgtcttttacacacgtttctgttttgaattggc 235  Q
    |||||||| ||||||||||| |||| ||||||||||||||||||||||||    
T  19773043 cctgtttcatgttcttgcgtatttttcacacgtttctgttttgaattggc 19773092  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 189 - 234
Target Start/End: Original strand, 20411009 - 20411054
Alignment:
Q  189 gtttcgtgttcttgcgtcttttacacacgtttctgttttgaattgg 234  Q
    ||||| |||||||||||||||| |||||||||||||||||||||||    
T  20411009 gtttcatgttcttgcgtctttttcacacgtttctgttttgaattgg 20411054  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 186 - 235
Target Start/End: Complemental strand, 23656057 - 23656008
Alignment:
Q  186 cctgtttcgtgttcttgcgtcttttacacacgtttctgttttgaattggc 235  Q
    |||||||| |||| ||||||||||| ||||||||||||||||||||||||    
T  23656057 cctgtttcatgttattgcgtctttttcacacgtttctgttttgaattggc 23656008  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 190 - 235
Target Start/End: Complemental strand, 23838713 - 23838668
Alignment:
Q  190 tttcgtgttcttgcgtcttttacacacgtttctgttttgaattggc 235  Q
    ||||||||||||| ||||||| ||||||||||||||||||||||||    
T  23838713 tttcgtgttcttgtgtctttttcacacgtttctgttttgaattggc 23838668  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 186 - 235
Target Start/End: Complemental strand, 25807850 - 25807801
Alignment:
Q  186 cctgtttcgtgttcttgcgtcttttacacacgtttctgttttgaattggc 235  Q
    ||||||| | ||||||||||||||| ||||||||||||||||||||||||    
T  25807850 cctgttttgcgttcttgcgtctttttcacacgtttctgttttgaattggc 25807801  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 188 - 233
Target Start/End: Complemental strand, 29045026 - 29044981
Alignment:
Q  188 tgtttcgtgttcttgcgtcttttacacacgtttctgttttgaattg 233  Q
    |||||| |||||||||||||||| ||||||||||||||||||||||    
T  29045026 tgtttcatgttcttgcgtctttttcacacgtttctgttttgaattg 29044981  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 186 - 235
Target Start/End: Complemental strand, 31734424 - 31734375
Alignment:
Q  186 cctgtttcgtgttcttgcgtcttttacacacgtttctgttttgaattggc 235  Q
    |||||||| ||||||||||||| || ||||||||||||||||||||||||    
T  31734424 cctgtttcatgttcttgcgtctatttcacacgtttctgttttgaattggc 31734375  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 185 - 229
Target Start/End: Complemental strand, 7430242 - 7430198
Alignment:
Q  185 ccctgtttcgtgttcttgcgtcttttacacacgtttctgttttga 229  Q
    ||||||||| |||||||||||||||| ||||||||||||||||||    
T  7430242 ccctgtttcatgttcttgcgtctttttcacacgtttctgttttga 7430198  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 188 - 232
Target Start/End: Complemental strand, 8055685 - 8055641
Alignment:
Q  188 tgtttcgtgttcttgcgtcttttacacacgtttctgttttgaatt 232  Q
    |||||| |||||||||||||||| |||||||||||||||||||||    
T  8055685 tgtttcatgttcttgcgtctttttcacacgtttctgttttgaatt 8055641  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 186 - 234
Target Start/End: Complemental strand, 12942847 - 12942799
Alignment:
Q  186 cctgtttcgtgttcttgcgtcttttacacacgtttctgttttgaattgg 234  Q
    ||||||||| ||||||||||||||| |||| ||||||||||||||||||    
T  12942847 cctgtttcgcgttcttgcgtctttttcacatgtttctgttttgaattgg 12942799  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #33
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 186 - 234
Target Start/End: Original strand, 28288841 - 28288889
Alignment:
Q  186 cctgtttcgtgttcttgcgtcttttacacacgtttctgttttgaattgg 234  Q
    ||||||||| ||||||||||||||| |||| ||||||||||||||||||    
T  28288841 cctgtttcgcgttcttgcgtctttttcacatgtttctgttttgaattgg 28288889  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #34
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 187 - 235
Target Start/End: Complemental strand, 32259563 - 32259515
Alignment:
Q  187 ctgtttcgtgttcttgcgtcttttacacacgtttctgttttgaattggc 235  Q
    ||||||| |||||||||||||||| |||| |||||||||||||||||||    
T  32259563 ctgtttcatgttcttgcgtctttttcacatgtttctgttttgaattggc 32259515  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #35
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 186 - 233
Target Start/End: Complemental strand, 7827690 - 7827643
Alignment:
Q  186 cctgtttcgtgttcttgcgtcttttacacacgtttctgttttgaattg 233  Q
    |||||||| ||||||||| |||||| ||||||||||||||||||||||    
T  7827690 cctgtttcatgttcttgcatctttttcacacgtttctgttttgaattg 7827643  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #36
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 188 - 235
Target Start/End: Complemental strand, 13765062 - 13765015
Alignment:
Q  188 tgtttcgtgttcttgcgtcttttacacacgtttctgttttgaattggc 235  Q
    ||||||| ||||||||||||||| |||| |||||||||||||||||||    
T  13765062 tgtttcgcgttcttgcgtctttttcacatgtttctgttttgaattggc 13765015  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #37
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 196 - 235
Target Start/End: Original strand, 15891923 - 15891962
Alignment:
Q  196 gttcttgcgtcttttacacacgtttctgttttgaattggc 235  Q
    ||||||||||||||| ||||||||||||||||||||||||    
T  15891923 gttcttgcgtctttttcacacgtttctgttttgaattggc 15891962  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #38
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 188 - 230
Target Start/End: Complemental strand, 12742973 - 12742931
Alignment:
Q  188 tgtttcgtgttcttgcgtcttttacacacgtttctgttttgaa 230  Q
    |||||| |||||||||||||||| |||||||||||||||||||    
T  12742973 tgtttcctgttcttgcgtctttttcacacgtttctgttttgaa 12742931  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #39
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 185 - 235
Target Start/End: Original strand, 15173788 - 15173838
Alignment:
Q  185 ccctgtttcgtgttcttgcgtcttttacacacgtttctgttttgaattggc 235  Q
    |||| ||||| |||||||||| |||| ||||||||||||||||||||||||    
T  15173788 ccctatttcgcgttcttgcgtgtttttcacacgtttctgttttgaattggc 15173838  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #40
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 186 - 232
Target Start/End: Original strand, 19858427 - 19858473
Alignment:
Q  186 cctgtttcgtgttcttgcgtcttttacacacgtttctgttttgaatt 232  Q
    |||||||| |||||||||||||||| ||||||||| |||||||||||    
T  19858427 cctgtttcatgttcttgcgtctttttcacacgtttttgttttgaatt 19858473  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #41
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 185 - 235
Target Start/End: Original strand, 25601610 - 25601660
Alignment:
Q  185 ccctgtttcgtgttcttgcgtcttttacacacgtttctgttttgaattggc 235  Q
    ||||||||| |||||||||||||||| |||| |||||| ||||||||||||    
T  25601610 ccctgtttcatgttcttgcgtctttttcacatgtttcttttttgaattggc 25601660  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #42
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 190 - 232
Target Start/End: Original strand, 34140965 - 34141007
Alignment:
Q  190 tttcgtgttcttgcgtcttttacacacgtttctgttttgaatt 232  Q
    |||| |||||||||||||||| |||||||||||||||||||||    
T  34140965 tttcatgttcttgcgtctttttcacacgtttctgttttgaatt 34141007  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #43
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 190 - 232
Target Start/End: Original strand, 34153581 - 34153623
Alignment:
Q  190 tttcgtgttcttgcgtcttttacacacgtttctgttttgaatt 232  Q
    |||| |||||||||||||||| |||||||||||||||||||||    
T  34153581 tttcatgttcttgcgtctttttcacacgtttctgttttgaatt 34153623  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #44
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 194 - 235
Target Start/End: Complemental strand, 4477368 - 4477327
Alignment:
Q  194 gtgttcttgcgtcttttacacacgtttctgttttgaattggc 235  Q
    ||||||||| ||||||| ||||||||||||||||||||||||    
T  4477368 gtgttcttgtgtctttttcacacgtttctgttttgaattggc 4477327  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #45
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 198 - 235
Target Start/End: Original strand, 7219208 - 7219245
Alignment:
Q  198 tcttgcgtcttttacacacgtttctgttttgaattggc 235  Q
    ||||||||||||| ||||||||||||||||||||||||    
T  7219208 tcttgcgtctttttcacacgtttctgttttgaattggc 7219245  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #46
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 186 - 235
Target Start/End: Original strand, 15704945 - 15704994
Alignment:
Q  186 cctgtttcgtgttcttgcgtcttttacacacgtttctgttttgaattggc 235  Q
    |||||||| ||||||||| |||||| |||||||||||| |||||||||||    
T  15704945 cctgtttcatgttcttgcatctttttcacacgtttctggtttgaattggc 15704994  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #47
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 186 - 235
Target Start/End: Original strand, 17318456 - 17318505
Alignment:
Q  186 cctgtttcgtgttcttgcgtcttttacacacgtttctgttttgaattggc 235  Q
    |||||||| ||||||||| |||| | ||||||||||||||||||||||||    
T  17318456 cctgtttcatgttcttgcatcttgttcacacgtttctgttttgaattggc 17318505  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #48
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 185 - 229
Target Start/End: Complemental strand, 1007 - 963
Alignment:
Q  185 ccctgtttcgtgttcttgcgtcttttacacacgtttctgttttga 229  Q
    ||||||||| ||||||||| |||||| ||||||||||||||||||    
T  1007 ccctgtttcatgttcttgcatctttttcacacgtttctgttttga 963  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #49
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 188 - 232
Target Start/End: Original strand, 1540418 - 1540462
Alignment:
Q  188 tgtttcgtgttcttgcgtcttttacacacgtttctgttttgaatt 232  Q
    |||||| |||||||||||||| | |||||||||||||||||||||    
T  1540418 tgtttcatgttcttgcgtcttgttcacacgtttctgttttgaatt 1540462  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #50
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 185 - 229
Target Start/End: Original strand, 14593958 - 14594002
Alignment:
Q  185 ccctgtttcgtgttcttgcgtcttttacacacgtttctgttttga 229  Q
    |||||||||  ||||||||||||||| ||||||||||||||||||    
T  14593958 ccctgtttcaagttcttgcgtctttttcacacgtttctgttttga 14594002  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #51
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 3 - 55
Target Start/End: Original strand, 16884852 - 16884904
Alignment:
Q  3 ggtgaaaaactgcagaattcacgtagtctggtctgtcgcgattcgccatggcg 55  Q
    |||||||||||| |||||||||||||||||  ||| ||||| |||||||||||    
T  16884852 ggtgaaaaactgtagaattcacgtagtctgacctgacgcgactcgccatggcg 16884904  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #52
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 186 - 230
Target Start/End: Complemental strand, 18928441 - 18928397
Alignment:
Q  186 cctgtttcgtgttcttgcgtcttttacacacgtttctgttttgaa 230  Q
    |||||||| |||||||||||||||| |||||||||| ||||||||    
T  18928441 cctgtttcatgttcttgcgtctttttcacacgtttccgttttgaa 18928397  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #53
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 190 - 234
Target Start/End: Complemental strand, 25175260 - 25175216
Alignment:
Q  190 tttcgtgttcttgcgtcttttacacacgtttctgttttgaattgg 234  Q
    ||||| ||||||| ||||||| |||||||||||||||||||||||    
T  25175260 tttcgcgttcttgtgtctttttcacacgtttctgttttgaattgg 25175216  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #54
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 190 - 234
Target Start/End: Original strand, 27654558 - 27654602
Alignment:
Q  190 tttcgtgttcttgcgtcttttacacacgtttctgttttgaattgg 234  Q
    ||||| ||||||| ||||||| |||||||||||||||||||||||    
T  27654558 tttcgcgttcttgtgtctttttcacacgtttctgttttgaattgg 27654602  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #55
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 186 - 229
Target Start/End: Original strand, 23150601 - 23150644
Alignment:
Q  186 cctgtttcgtgttcttgcgtcttttacacacgtttctgttttga 229  Q
    |||||||| ||||||||||||||||  |||||||||||||||||    
T  23150601 cctgtttcatgttcttgcgtctttttaacacgtttctgttttga 23150644  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #56
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 182 - 234
Target Start/End: Complemental strand, 25921453 - 25921399
Alignment:
Q  182 ctgccctgtttcgtgttcttgcgtc--ttttacacacgtttctgttttgaattgg 234  Q
    ||||||||||||| |||||||||||  ||||  ||||||||||||||||||||||    
T  25921453 ctgccctgtttcgcgttcttgcgtctttttttaacacgtttctgttttgaattgg 25921399  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #57
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 187 - 230
Target Start/End: Original strand, 26923953 - 26923996
Alignment:
Q  187 ctgtttcgtgttcttgcgtcttttacacacgtttctgttttgaa 230  Q
    ||||||| |||||||||||||||| |||||||||| ||||||||    
T  26923953 ctgtttcatgttcttgcgtctttttcacacgtttccgttttgaa 26923996  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #58
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 187 - 230
Target Start/End: Complemental strand, 33862450 - 33862407
Alignment:
Q  187 ctgtttcgtgttcttgcgtcttttacacacgtttctgttttgaa 230  Q
    ||||||| |||||||||||||||| |||||||||| ||||||||    
T  33862450 ctgtttcatgttcttgcgtctttttcacacgtttccgttttgaa 33862407  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #59
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 185 - 235
Target Start/End: Original strand, 8767596 - 8767646
Alignment:
Q  185 ccctgtttcgtgttcttgcgtcttttacacacgtttctgttttgaattggc 235  Q
    ||||||||  |||||||| ||||||| ||||| ||||||||||||||||||    
T  8767596 ccctgttttatgttcttgggtctttttcacacatttctgttttgaattggc 8767646  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #60
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 188 - 230
Target Start/End: Original strand, 17883004 - 17883046
Alignment:
Q  188 tgtttcgtgttcttgcgtcttttacacacgtttctgttttgaa 230  Q
    |||||| |||||||||||||||| |||||||||| ||||||||    
T  17883004 tgtttcatgttcttgcgtctttttcacacgtttccgttttgaa 17883046  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #61
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 197 - 235
Target Start/End: Original strand, 31022042 - 31022080
Alignment:
Q  197 ttcttgcgtcttttacacacgtttctgttttgaattggc 235  Q
    |||||||||||||| |||||||||||| |||||||||||    
T  31022042 ttcttgcgtctttttcacacgtttctggtttgaattggc 31022080  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #62
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 190 - 235
Target Start/End: Complemental strand, 22806463 - 22806418
Alignment:
Q  190 tttcgtgttcttgcgtcttttacacacgtttctgttttgaattggc 235  Q
    |||| |||||||||||||||| |||||||||  |||||||||||||    
T  22806463 tttcatgttcttgcgtcttttccacacgttttagttttgaattggc 22806418  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #63
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 186 - 235
Target Start/End: Original strand, 27330306 - 27330355
Alignment:
Q  186 cctgtttcgtgttcttgcgtcttttacacacgtttctgttttgaattggc 235  Q
    |||||| | |||||||| ||||||| ||||| ||||||||||||||||||    
T  27330306 cctgttccatgttcttgtgtctttttcacacatttctgttttgaattggc 27330355  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #64
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 186 - 235
Target Start/End: Original strand, 27391046 - 27391095
Alignment:
Q  186 cctgtttcgtgttcttgcgtcttttacacacgtttctgttttgaattggc 235  Q
    |||||| | |||||||| ||||||| ||||| ||||||||||||||||||    
T  27391046 cctgttccatgttcttgtgtctttttcacacatttctgttttgaattggc 27391095  T

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Target: chr6; HSP #65
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 188 - 229
Target Start/End: Original strand, 34296604 - 34296645
Alignment:
Q  188 tgtttcgtgttcttgcgtcttttacacacgtttctgttttga 229  Q
    |||||| |||||||||||||||| ||||| ||||||||||||    
T  34296604 tgtttcatgttcttgcgtctttttcacacatttctgttttga 34296645  T

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Target: chr6; HSP #66
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 188 - 232
Target Start/End: Complemental strand, 13285424 - 13285380
Alignment:
Q  188 tgtttcgtgttcttgcgtcttttacacacgtttctgttttgaatt 232  Q
    |||||| ||||||||||||| || |||| ||||||||||||||||    
T  13285424 tgtttcatgttcttgcgtctgtttcacatgtttctgttttgaatt 13285380  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #67
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 185 - 229
Target Start/End: Complemental strand, 18452372 - 18452328
Alignment:
Q  185 ccctgtttcgtgttcttgcgtcttttacacacgtttctgttttga 229  Q
    |||||||| | ||||||||||||||| ||||| ||||||||||||    
T  18452372 ccctgttttgcgttcttgcgtctttttcacacatttctgttttga 18452328  T

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Target: chr6; HSP #68
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 183 - 235
Target Start/End: Original strand, 18455403 - 18455455
Alignment:
Q  183 tgccctgtttcgtgttcttgcgtcttttacacacgtttctgttttgaattggc 235  Q
    ||||||||||| ||||||| | |||||| |||||||||  |||||||||||||    
T  18455403 tgccctgtttcatgttcttacatctttttcacacgttttggttttgaattggc 18455455  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0042 (Bit Score: 136; Significance: 4e-71; HSPs: 1)
Name: scaffold0042
Description:

Target: scaffold0042; HSP #1
Raw Score: 136; E-Value: 4e-71
Query Start/End: Original strand, 3 - 197
Target Start/End: Complemental strand, 67518 - 67313
Alignment:
Q  3 ggtgaaaaactgcagaattcacgtagtctggtctgtcgcgattcgccatggcggagagatatttcgcctggcggata-----------tattcaccattt 91  Q
    ||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||            | ||| ||||||    
T  67518 ggtgaaaaactgcagaattcacgtagtcttgtctgtcgcgattcgccatggcggagagatatttcgcctggcggatcattccagtagcttttcgccattt 67419  T
Q  92 cctcgccagtagttcgcctggcgaaacatcatagtagccactcgccttgagctcgccattaattcgccttgcgaaatgttcagtggcagactgccctgtt 191  Q
    ||||||||||||||||||||| ||||||||| ||||||||||||||||||||||||||||| ||||||| ||||||||||||||||||||||||||||||    
T  67418 cctcgccagtagttcgcctggtgaaacatcacagtagccactcgccttgagctcgccattagttcgcctggcgaaatgttcagtggcagactgccctgtt 67319  T
Q  192 tcgtgt 197  Q
    ||||||    
T  67318 tcgtgt 67313  T

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Target: scaffold0001 (Bit Score: 130; Significance: 2e-67; HSPs: 3)
Name: scaffold0001
Description:

Target: scaffold0001; HSP #1
Raw Score: 130; E-Value: 2e-67
Query Start/End: Original strand, 3 - 235
Target Start/End: Original strand, 152350 - 152593
Alignment:
Q  3 ggtgaaaaactgcagaattcacgtagtctggtctgtcgcgattcgccatggcggagagatatttcgcctggcggata-----------tattcaccattt 91  Q
    ||||||||||| ||||||||| ||||||| |||||||||||||||| |||||||||||||||||  ||||||||||            | ||| ||||||    
T  152350 ggtgaaaaactacagaattcatgtagtctagtctgtcgcgattcgcaatggcggagagatatttttcctggcggatcattccagtagcttttcgccattt 152449  T
Q  92 cctcgccagtagttcgcctggcgaaacatcatagtagccactcgccttgagctcgccattaattcgccttgcgaaatgttcagtggcagactgccctgtt 191  Q
    || ||| |||||||||| ||||||||||||| ||||||||||||||||||||||||||||| ||||| | |||||||||||||||||||||| |||||||    
T  152450 ccacgctagtagttcgcttggcgaaacatcacagtagccactcgccttgagctcgccattagttcgcttggcgaaatgttcagtggcagactaccctgtt 152549  T
Q  192 tcgtgttcttgcgtcttttacacacgtttctgttttgaattggc 235  Q
    ||||||||||||||||| | ||||||||||||||||||||||||    
T  152550 tcgtgttcttgcgtcttatccacacgtttctgttttgaattggc 152593  T

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Target: scaffold0001; HSP #2
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 196 - 235
Target Start/End: Complemental strand, 169147 - 169108
Alignment:
Q  196 gttcttgcgtcttttacacacgtttctgttttgaattggc 235  Q
    ||||||||||||||| |||||||||||||||||| |||||    
T  169147 gttcttgcgtctttttcacacgtttctgttttgagttggc 169108  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0001; HSP #3
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 196 - 235
Target Start/End: Complemental strand, 176500 - 176461
Alignment:
Q  196 gttcttgcgtcttttacacacgtttctgttttgaattggc 235  Q
    ||||||||||||||| |||||||||||||||||| |||||    
T  176500 gttcttgcgtctttttcacacgtttctgttttgagttggc 176461  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0607 (Bit Score: 125; Significance: 2e-64; HSPs: 1)
Name: scaffold0607
Description:

Target: scaffold0607; HSP #1
Raw Score: 125; E-Value: 2e-64
Query Start/End: Original strand, 3 - 235
Target Start/End: Complemental strand, 3621 - 3375
Alignment:
Q  3 ggtgaaaaactgcagaattcac----gtagtctggtctgtcgcgattcgccatggcggagagatatttcgcctggcggata-----------tattcacc 87  Q
    ||||||||||||||||||||||    ||||||||||||||||||||||||||||||||| ||||||||||||||||||||            | ||| ||    
T  3621 ggtgaaaaactgcagaattcactcacgtagtctggtctgtcgcgattcgccatggcggatagatatttcgcctggcggatcattccagtagcttttcgcc 3522  T
Q  88 atttcctcgccagtagttcgcctggcgaaacatcatagtagccactcgccttgagctcgccattaattcgccttgcgaaatgttcagtggcagactgccc 187  Q
    ||||||||||||||||||||||||||||||||||| |||||||| |||||||   |||||||||| || |||| ||||||||||||||||||||||| |     
T  3521 atttcctcgccagtagttcgcctggcgaaacatcacagtagccattcgcctttttctcgccattagttggcctggcgaaatgttcagtggcagactg-cg 3423  T
Q  188 tgtttcgtgttcttgcgtcttttacacacgtttctgttttgaattggc 235  Q
    |||||||||||||||| ||||||||||| |||||||||||||||||||    
T  3422 tgtttcgtgttcttgcatcttttacacatgtttctgttttgaattggc 3375  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0023 (Bit Score: 117; Significance: 1e-59; HSPs: 2)
Name: scaffold0023
Description:

Target: scaffold0023; HSP #1
Raw Score: 117; E-Value: 1e-59
Query Start/End: Original strand, 3 - 235
Target Start/End: Complemental strand, 105815 - 105580
Alignment:
Q  3 ggtgaaaaactgcagaattcacgtagtctggtctgtcgcgattcgccatggcggagagatatttcgcctggcggat-----------atattcaccattt 91  Q
    ||||||||| ||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||            | ||| ||||||    
T  105815 ggtgaaaaaatgcagaattaacgtagtctggtctgtcgcgattcgccatggcggagagatatttcgcctggcggatcattccagtagcttttcgccattt 105716  T
Q  92 cctcgccagtagttcgcctggcgaaacatcatagtagccactcgccttgagctcgccattaattcgccttgcgaaatgttcagtggcagactgccctgtt 191  Q
    |||||||||||| |||||||||||||||||| | ||| ||||||||||||||||||||||| ||||||| |||||||||        |||||||||| ||    
T  105715 cctcgccagtaggtcgcctggcgaaacatcacaataggcactcgccttgagctcgccattagttcgcctagcgaaatgt--------agactgccctatt 105624  T
Q  192 tcgtgttcttgcgtcttttacacacgtttctgttttgaattggc 235  Q
    |||||||||||| | |||||||||| ||||||||||||||||||    
T  105623 tcgtgttcttgcatattttacacacatttctgttttgaattggc 105580  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0023; HSP #2
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 186 - 232
Target Start/End: Complemental strand, 95068 - 95022
Alignment:
Q  186 cctgtttcgtgttcttgcgtcttttacacacgtttctgttttgaatt 232  Q
    |||||||| |||||||||||||||| |||||||||||||||||||||    
T  95068 cctgtttcatgttcttgcgtctttttcacacgtttctgttttgaatt 95022  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0008 (Bit Score: 90; Significance: 1e-43; HSPs: 1)
Name: scaffold0008
Description:

Target: scaffold0008; HSP #1
Raw Score: 90; E-Value: 1e-43
Query Start/End: Original strand, 3 - 235
Target Start/End: Original strand, 11646 - 11890
Alignment:
Q  3 ggtgaaaaactgcagaattcacgtagtctggtctgtcgcgattcgccatggcggagagatatttcgcctggcggat-at----------attcaccattt 91  Q
    ||||||||||| || |||| ||||||||||||||||| ||||||||||||||||||||||||||||||| |||||| ||          |||| ||||||    
T  11646 ggtgaaaaactacataatttacgtagtctggtctgtcacgattcgccatggcggagagatatttcgcctagcggatcattccagtagtcattcgccattt 11745  T
Q  92 cctcgccagtagttcgcc-tggcgaaacatcatagtagccactcgccttgagctcgccattaattcgccttgcgaaatgttcagtggcagactgccctgt 190  Q
     ||||||| ||||||||| |||||||  |||| | ||||   ||||| |   ||||||| || ||||||| |||||||||||||||||||||| ||||||    
T  11746 tctcgccattagttcgccatggcgaagtatcacattagcttttcgccattccctcgccagtagttcgcctggcgaaatgttcagtggcagactaccctgt 11845  T
Q  191 ttcgtgttcttgcgtcttttacacacgtttctgttttgaattggc 235  Q
    ||| ||||||||| |||||| ||||||||||||||||||||||||    
T  11846 ttcatgttcttgcatctttttcacacgtttctgttttgaattggc 11890  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0575 (Bit Score: 77; Significance: 7e-36; HSPs: 2)
Name: scaffold0575
Description:

Target: scaffold0575; HSP #1
Raw Score: 77; E-Value: 7e-36
Query Start/End: Original strand, 3 - 150
Target Start/End: Complemental strand, 9289 - 9131
Alignment:
Q  3 ggtgaaaaactgcagaattcacgtagtctggtctgtcgcgattcgccatggcggagagatatttcgcctggcggat-----------atattcaccattt 91  Q
    |||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||| ||||||| |||            | ||| ||||||    
T  9289 ggtgaaaaactgcagaattcacgtagtctggtttgtcgcgattcgccatggcggagagatattttgcctggcagatcattccagtagcttttcgccattt 9190  T
Q  92 cctcgccagtagttcgcctggcgaaacatcatagtagccactcgccttgagctcgccat 150  Q
    |||||||| |||||||||||||||||||||  ||||||||||||||||  |||||||||    
T  9189 cctcgccattagttcgcctggcgaaacatctcagtagccactcgccttttgctcgccat 9131  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0575; HSP #2
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 186 - 232
Target Start/End: Original strand, 5660 - 5706
Alignment:
Q  186 cctgtttcgtgttcttgcgtcttttacacacgtttctgttttgaatt 232  Q
    |||||||| ||||||||||||||||  ||||||||||||||||||||    
T  5660 cctgtttcatgttcttgcgtcttttggacacgtttctgttttgaatt 5706  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0335 (Bit Score: 74; Significance: 4e-34; HSPs: 1)
Name: scaffold0335
Description:

Target: scaffold0335; HSP #1
Raw Score: 74; E-Value: 4e-34
Query Start/End: Original strand, 3 - 235
Target Start/End: Complemental strand, 1606 - 1373
Alignment:
Q  3 ggtgaaaaactgcagaattcacgtagtctggtctgtcgcgattcgccatggcggagagatatttcgcctggcggatatattcaccatttcctcgccagta 102  Q
    |||||||||||||||||||| |||||||||||||||||||||| || ||||||||||||||||||||||||||||    | ||  |    ||||||| |     
T  1606 ggtgaaaaactgcagaattctcgtagtctggtctgtcgcgatttgctatggcggagagatatttcgcctggcggaccattccagtagccactcgccattt 1507  T
Q  103 gttcgcc-tggcgaaacatcatagtagccactcgccttgagctcgccattaattcgccttgcgaaatgttcagtggcagactgccctgtttcgtgttctt 201  Q
      ||||| |||||||| |||| |||||    ||||  |   ||||||| || || |||| |||||||| |||||||||||||||||||||||||||||||    
T  1506 tctcgccttggcgaaatatcacagtagattttcgcaattccctcgccagtagtttgcctggcgaaatgatcagtggcagactgccctgtttcgtgttctt 1407  T
Q  202 gcgtcttttacacacgtttctgttttgaattggc 235  Q
    ||||||||| || |  ||||||||||||||||||    
T  1406 gcgtctttttcatatttttctgttttgaattggc 1373  T

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Target: scaffold0413 (Bit Score: 62; Significance: 6e-27; HSPs: 2)
Name: scaffold0413
Description:

Target: scaffold0413; HSP #1
Raw Score: 62; E-Value: 6e-27
Query Start/End: Original strand, 154 - 235
Target Start/End: Complemental strand, 11340 - 11259
Alignment:
Q  154 ttcgccttgcgaaatgttcagtggcagactgccctgtttcgtgttcttgcgtcttttacacacgtttctgttttgaattggc 235  Q
    ||||||| |||||||||||||||||| |||||||| ||||||||||||||||||||| ||||||||||||||||||| ||||    
T  11340 ttcgcctggcgaaatgttcagtggcaaactgccctatttcgtgttcttgcgtctttttcacacgtttctgttttgaactggc 11259  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0413; HSP #2
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 3 - 60
Target Start/End: Complemental strand, 11474 - 11417
Alignment:
Q  3 ggtgaaaaactgcagaattcacgtagtctggtctgtcgcgattcgccatggcggagag 60  Q
    ||||||||||||||||||||||||| |||||||||||||||||| |||||||||||||    
T  11474 ggtgaaaaactgcagaattcacgtaatctggtctgtcgcgattcaccatggcggagag 11417  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0071 (Bit Score: 62; Significance: 6e-27; HSPs: 1)
Name: scaffold0071
Description:

Target: scaffold0071; HSP #1
Raw Score: 62; E-Value: 6e-27
Query Start/End: Original strand, 3 - 68
Target Start/End: Complemental strand, 51815 - 51750
Alignment:
Q  3 ggtgaaaaactgcagaattcacgtagtctggtctgtcgcgattcgccatggcggagagatatttcg 68  Q
    |||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||    
T  51815 ggtgaaaaactgcagaattcacatagtctggtctgtcgcgattcgccatggcggagagatatttcg 51750  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0007 (Bit Score: 53; Significance: 1e-21; HSPs: 1)
Name: scaffold0007
Description:

Target: scaffold0007; HSP #1
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 154 - 234
Target Start/End: Original strand, 82692 - 82772
Alignment:
Q  154 ttcgccttgcgaaatgttcagtggcagactgccctgtttcgtgttcttgcgtcttttacacacgtttctgttttgaattgg 234  Q
    ||||||| ||||| ||||||||||||| |||||||||||||||||| ||||||| || |||||||||||||||||| ||||    
T  82692 ttcgcctggcgaattgttcagtggcagcctgccctgtttcgtgttcatgcgtctatttcacacgtttctgttttgagttgg 82772  T

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Target: scaffold1354 (Bit Score: 49; Significance: 4e-19; HSPs: 1)
Name: scaffold1354
Description:

Target: scaffold1354; HSP #1
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 155 - 235
Target Start/End: Original strand, 203 - 283
Alignment:
Q  155 tcgccttgcgaaatgttcagtggcagactgccctgtttcgtgttcttgcgtcttttacacacgtttctgttttgaattggc 235  Q
    |||||||||||  ||||||||||||| ||||||||||||| |||||||||||| || |||||||| ||||||||| |||||    
T  203 tcgccttgcgagttgttcagtggcagtctgccctgtttcgcgttcttgcgtctgtttcacacgttactgttttgagttggc 283  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 47; Significance: 6e-18; HSPs: 67)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 24 - 78
Target Start/End: Complemental strand, 21903826 - 21903772
Alignment:
Q  24 cgtagtctggtctgtcgcgattcgccatggcggagagatatttcgcctggcggat 78  Q
    |||||||||||||||||||| ||||||||||||||||||||||||| ||||||||    
T  21903826 cgtagtctggtctgtcgcgactcgccatggcggagagatatttcgcgtggcggat 21903772  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 185 - 235
Target Start/End: Original strand, 21081304 - 21081354
Alignment:
Q  185 ccctgtttcgtgttcttgcgtcttttacacacgtttctgttttgaattggc 235  Q
    |||||||||| ||||||||||||||| ||||||||||||||||||||||||    
T  21081304 ccctgtttcgcgttcttgcgtctttttcacacgtttctgttttgaattggc 21081354  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 186 - 235
Target Start/End: Original strand, 23338734 - 23338783
Alignment:
Q  186 cctgtttcgtgttcttgcgtcttttacacacgtttctgttttgaattggc 235  Q
    ||||||||| ||||||||||||||| ||||||||||||||||||||||||    
T  23338734 cctgtttcgcgttcttgcgtctttttcacacgtttctgttttgaattggc 23338783  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 186 - 235
Target Start/End: Complemental strand, 36839889 - 36839840
Alignment:
Q  186 cctgtttcgtgttcttgcgtcttttacacacgtttctgttttgaattggc 235  Q
    |||||||| |||||||||||||||| ||||||||||||||||||||||||    
T  36839889 cctgtttcatgttcttgcgtctttttcacacgtttctgttttgaattggc 36839840  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 155 - 235
Target Start/End: Original strand, 19196378 - 19196458
Alignment:
Q  155 tcgccttgcgaaatgttcagtggcagactgccctgtttcgtgttcttgcgtcttttacacacgtttctgttttgaattggc 235  Q
    |||||| ||||  ||||||||||||| || |||||||| |||||||||||||| || | |||||||||||||||| |||||    
T  19196378 tcgcctcgcgagttgttcagtggcagtcttccctgttttgtgttcttgcgtctgtttcgcacgtttctgttttgagttggc 19196458  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 183 - 235
Target Start/End: Original strand, 23068781 - 23068833
Alignment:
Q  183 tgccctgtttcgtgttcttgcgtcttttacacacgtttctgttttgaattggc 235  Q
    ||||||||||| |||||||| ||||||| ||||||||||||||||||||||||    
T  23068781 tgccctgtttcatgttcttgtgtctttttcacacgtttctgttttgaattggc 23068833  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 188 - 235
Target Start/End: Complemental strand, 9975645 - 9975598
Alignment:
Q  188 tgtttcgtgttcttgcgtcttttacacacgtttctgttttgaattggc 235  Q
    |||||| |||||||||||||||| ||||||||||||||||||||||||    
T  9975645 tgtttcatgttcttgcgtctttttcacacgtttctgttttgaattggc 9975598  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 186 - 233
Target Start/End: Complemental strand, 23610194 - 23610147
Alignment:
Q  186 cctgtttcgtgttcttgcgtcttttacacacgtttctgttttgaattg 233  Q
    |||||||||||||||||||| |||| ||||||||||||||||||||||    
T  23610194 cctgtttcgtgttcttgcgtatttttcacacgtttctgttttgaattg 23610147  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 186 - 233
Target Start/End: Original strand, 24781174 - 24781221
Alignment:
Q  186 cctgtttcgtgttcttgcgtcttttacacacgtttctgttttgaattg 233  Q
    |||||||| |||||||||||||||| ||||||||||||||||||||||    
T  24781174 cctgtttcatgttcttgcgtctttttcacacgtttctgttttgaattg 24781221  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 185 - 235
Target Start/End: Original strand, 149880 - 149930
Alignment:
Q  185 ccctgtttcgtgttcttgcgtcttttacacacgtttctgttttgaattggc 235  Q
    ||||||||  |||||||||||||||| ||||||||||||||||||||||||    
T  149880 ccctgttttatgttcttgcgtctttttcacacgtttctgttttgaattggc 149930  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 185 - 235
Target Start/End: Original strand, 18358302 - 18358352
Alignment:
Q  185 ccctgtttcgtgttcttgcgtcttttacacacgtttctgttttgaattggc 235  Q
    |||| ||||| ||||||||||||||| ||||||||||||||||||||||||    
T  18358302 ccctatttcgcgttcttgcgtctttttcacacgtttctgttttgaattggc 18358352  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 186 - 232
Target Start/End: Complemental strand, 18809600 - 18809554
Alignment:
Q  186 cctgtttcgtgttcttgcgtcttttacacacgtttctgttttgaatt 232  Q
    |||||||| |||||||||||||||| |||||||||||||||||||||    
T  18809600 cctgtttcatgttcttgcgtctttttcacacgtttctgttttgaatt 18809554  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 186 - 232
Target Start/End: Complemental strand, 23131519 - 23131473
Alignment:
Q  186 cctgtttcgtgttcttgcgtcttttacacacgtttctgttttgaatt 232  Q
    |||||||| |||||||||||||||| |||||||||||||||||||||    
T  23131519 cctgtttcatgttcttgcgtctttttcacacgtttctgttttgaatt 23131473  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 186 - 232
Target Start/End: Complemental strand, 23133986 - 23133940
Alignment:
Q  186 cctgtttcgtgttcttgcgtcttttacacacgtttctgttttgaatt 232  Q
    |||||||| |||||||||||||||| |||||||||||||||||||||    
T  23133986 cctgtttcatgttcttgcgtctttttcacacgtttctgttttgaatt 23133940  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 186 - 232
Target Start/End: Original strand, 23711518 - 23711564
Alignment:
Q  186 cctgtttcgtgttcttgcgtcttttacacacgtttctgttttgaatt 232  Q
    |||||||| |||||||||||||||| |||||||||||||||||||||    
T  23711518 cctgtttcatgttcttgcgtctttttcacacgtttctgttttgaatt 23711564  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 186 - 232
Target Start/End: Complemental strand, 26506036 - 26505990
Alignment:
Q  186 cctgtttcgtgttcttgcgtcttttacacacgtttctgttttgaatt 232  Q
    |||||||| |||||||||||||||| |||||||||||||||||||||    
T  26506036 cctgtttcatgttcttgcgtctttttcacacgtttctgttttgaatt 26505990  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 186 - 232
Target Start/End: Original strand, 27920269 - 27920315
Alignment:
Q  186 cctgtttcgtgttcttgcgtcttttacacacgtttctgttttgaatt 232  Q
    |||||||| |||||||||||||||| |||||||||||||||||||||    
T  27920269 cctgtttcatgttcttgcgtctttttcacacgtttctgttttgaatt 27920315  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 185 - 235
Target Start/End: Complemental strand, 29114030 - 29113980
Alignment:
Q  185 ccctgtttcgtgttcttgcgtcttttacacacgtttctgttttgaattggc 235  Q
    |||||||||| ||||||||||||||| ||||| ||||||||||||||||||    
T  29114030 ccctgtttcgcgttcttgcgtctttttcacacatttctgttttgaattggc 29113980  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 186 - 232
Target Start/End: Original strand, 34402027 - 34402073
Alignment:
Q  186 cctgtttcgtgttcttgcgtcttttacacacgtttctgttttgaatt 232  Q
    |||||||| |||||||||||||||| |||||||||||||||||||||    
T  34402027 cctgtttcatgttcttgcgtctttttcacacgtttctgttttgaatt 34402073  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 186 - 235
Target Start/End: Original strand, 5031464 - 5031513
Alignment:
Q  186 cctgtttcgtgttcttgcgtcttttacacacgtttctgttttgaattggc 235  Q
    |||||||| |||||||||||||||| ||||| ||||||||||||||||||    
T  5031464 cctgtttcatgttcttgcgtctttttcacacatttctgttttgaattggc 5031513  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 186 - 235
Target Start/End: Complemental strand, 17307204 - 17307155
Alignment:
Q  186 cctgtttcgtgttcttgcgtcttttacacacgtttctgttttgaattggc 235  Q
    |||||||| ||||| |||||||||| ||||||||||||||||||||||||    
T  17307204 cctgtttcatgttcctgcgtctttttcacacgtttctgttttgaattggc 17307155  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 190 - 235
Target Start/End: Original strand, 19201538 - 19201583
Alignment:
Q  190 tttcgtgttcttgcgtcttttacacacgtttctgttttgaattggc 235  Q
    |||| |||||||||||||||| ||||||||||||||||||||||||    
T  19201538 tttcatgttcttgcgtctttttcacacgtttctgttttgaattggc 19201583  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 187 - 232
Target Start/End: Complemental strand, 23136236 - 23136191
Alignment:
Q  187 ctgtttcgtgttcttgcgtcttttacacacgtttctgttttgaatt 232  Q
    ||||||| |||||||||||||||| |||||||||||||||||||||    
T  23136236 ctgtttcatgttcttgcgtctttttcacacgtttctgttttgaatt 23136191  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 186 - 235
Target Start/End: Original strand, 28652836 - 28652885
Alignment:
Q  186 cctgtttcgtgttcttgcgtcttttacacacgtttctgttttgaattggc 235  Q
    |||||||| |||||||||||||||| || |||||||||||||||||||||    
T  28652836 cctgtttcatgttcttgcgtctttttcatacgtttctgttttgaattggc 28652885  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 186 - 234
Target Start/End: Original strand, 10684267 - 10684315
Alignment:
Q  186 cctgtttcgtgttcttgcgtcttttacacacgtttctgttttgaattgg 234  Q
    ||||||||| ||||||||||||||| |||| ||||||||||||||||||    
T  10684267 cctgtttcgcgttcttgcgtctttttcacatgtttctgttttgaattgg 10684315  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 183 - 235
Target Start/End: Complemental strand, 21368828 - 21368776
Alignment:
Q  183 tgccctgtttcgtgttcttgcgtcttttacacacgtttctgttttgaattggc 235  Q
    ||||||||||| ||||||||| |||||  ||||||||||||||||||||||||    
T  21368828 tgccctgtttcatgttcttgcatctttatcacacgtttctgttttgaattggc 21368776  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 183 - 231
Target Start/End: Complemental strand, 22686560 - 22686512
Alignment:
Q  183 tgccctgtttcgtgttcttgcgtcttttacacacgtttctgttttgaat 231  Q
    ||||||||||| |||| ||||||||||| ||||||||||||||||||||    
T  22686560 tgccctgtttcatgtttttgcgtctttttcacacgtttctgttttgaat 22686512  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 188 - 232
Target Start/End: Complemental strand, 26508512 - 26508468
Alignment:
Q  188 tgtttcgtgttcttgcgtcttttacacacgtttctgttttgaatt 232  Q
    |||||| |||||||||||||||| |||||||||||||||||||||    
T  26508512 tgtttcatgttcttgcgtctttttcacacgtttctgttttgaatt 26508468  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 188 - 235
Target Start/End: Original strand, 2524083 - 2524130
Alignment:
Q  188 tgtttcgtgttcttgcgtcttttacacacgtttctgttttgaattggc 235  Q
    |||||| ||||||||||||||||  |||||||||||||||||||||||    
T  2524083 tgtttcatgttcttgcgtctttttaacacgtttctgttttgaattggc 2524130  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 188 - 235
Target Start/End: Original strand, 10039470 - 10039517
Alignment:
Q  188 tgtttcgtgttcttgcgtcttttacacacgtttctgttttgaattggc 235  Q
    |||||| |||||||||||||||| |||||||||||||| |||||||||    
T  10039470 tgtttcatgttcttgcgtctttttcacacgtttctgttctgaattggc 10039517  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 155 - 234
Target Start/End: Original strand, 20006598 - 20006676
Alignment:
Q  155 tcgccttgcgaaatgttcagtggcagactgccctgtttcgtgttcttgcgtcttttacacacgtttctgttttgaattgg 234  Q
    |||||| ||||| |||||||||||||  |||||||||||| ||||||||||||  | |||||| ||||||||||| ||||    
T  20006598 tcgcctcgcgaattgttcagtggcagcttgccctgtttcgcgttcttgcgtctgcttcacacg-ttctgttttgagttgg 20006676  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 188 - 235
Target Start/End: Complemental strand, 25183903 - 25183856
Alignment:
Q  188 tgtttcgtgttcttgcgtcttttacacacgtttctgttttgaattggc 235  Q
    ||||||| ||||||||||||||| ||||||||| ||||||||||||||    
T  25183903 tgtttcgcgttcttgcgtctttttcacacgtttatgttttgaattggc 25183856  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 155 - 226
Target Start/End: Complemental strand, 45527978 - 45527907
Alignment:
Q  155 tcgccttgcgaaatgttcagtggcagactgccctgtttcgtgttcttgcgtcttttacacacgtttctgttt 226  Q
    |||||| ||||| ||||||||||||| ||||||||||||  |||||||| | | || |||||||||||||||    
T  45527978 tcgcctcgcgaattgttcagtggcagcctgccctgtttcacgttcttgcatttgtttcacacgtttctgttt 45527907  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 173 - 235
Target Start/End: Complemental strand, 19646639 - 19646577
Alignment:
Q  173 agtggcagactgccctgtttcgtgttcttgcgtcttttacacacgtttctgttttgaattggc 235  Q
    |||||||| || |||||||||| ||||||| |||| || |||||||||||||||||| |||||    
T  19646639 agtggcagcctaccctgtttcgcgttcttgtgtctgtttcacacgtttctgttttgagttggc 19646577  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 195 - 233
Target Start/End: Original strand, 27484813 - 27484851
Alignment:
Q  195 tgttcttgcgtcttttacacacgtttctgttttgaattg 233  Q
    |||||||||||||||| ||||||||||||||||||||||    
T  27484813 tgttcttgcgtctttttcacacgtttctgttttgaattg 27484851  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 190 - 235
Target Start/End: Original strand, 19661993 - 19662038
Alignment:
Q  190 tttcgtgttcttgcgtcttttacacacgtttctgttttgaattggc 235  Q
    ||||| ||||||| ||||||| ||||||||||||||||||||||||    
T  19661993 tttcgcgttcttgtgtctttttcacacgtttctgttttgaattggc 19662038  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 185 - 234
Target Start/End: Complemental strand, 21915341 - 21915292
Alignment:
Q  185 ccctgtttcgtgttcttgcgtcttttacacacgtttctgttttgaattgg 234  Q
    |||||||||| |||||||| |||||| |||| ||||||||||||||||||    
T  21915341 ccctgtttcgcgttcttgcatctttttcacatgtttctgttttgaattgg 21915292  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 186 - 235
Target Start/End: Complemental strand, 24515904 - 24515855
Alignment:
Q  186 cctgtttcgtgttcttgcgtcttttacacacgtttctgttttgaattggc 235  Q
    |||||||| |||||||||||||||| |||| |||| ||||||||||||||    
T  24515904 cctgtttcatgttcttgcgtctttttcacatgtttttgttttgaattggc 24515855  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 187 - 232
Target Start/End: Complemental strand, 28577755 - 28577710
Alignment:
Q  187 ctgtttcgtgttcttgcgtcttttacacacgtttctgttttgaatt 232  Q
    ||||||| |||||||||||||||| |||||||||||||||| ||||    
T  28577755 ctgtttcatgttcttgcgtctttttcacacgtttctgtttttaatt 28577710  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 185 - 233
Target Start/End: Original strand, 1384019 - 1384067
Alignment:
Q  185 ccctgtttcgtgttcttgcgtcttttacacacgtttctgttttgaattg 233  Q
    ||||||||| |||| ||||||||||| || |||||||||||||||||||    
T  1384019 ccctgtttcatgtttttgcgtctttttcaaacgtttctgttttgaattg 1384067  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 182 - 234
Target Start/End: Original strand, 14179984 - 14180036
Alignment:
Q  182 ctgccctgtttcgtgttcttgcgtcttttacacacgtttctgttttgaattgg 234  Q
    |||||||||||||||||||||||||| || || ||||||||| ||||| ||||    
T  14179984 ctgccctgtttcgtgttcttgcgtctgtttcatacgtttctgctttgagttgg 14180036  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #42
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 186 - 234
Target Start/End: Complemental strand, 20261877 - 20261829
Alignment:
Q  186 cctgtttcgtgttcttgcgtcttttacacacgtttctgttttgaattgg 234  Q
    ||||||||| |||||| |||||||| |||| ||||||||||||||||||    
T  20261877 cctgtttcgcgttcttccgtctttttcacatgtttctgttttgaattgg 20261829  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #43
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 3 - 51
Target Start/End: Complemental strand, 23086218 - 23086170
Alignment:
Q  3 ggtgaaaaactgcagaattcacgtagtctggtctgtcgcgattcgccat 51  Q
    ||||||||||||||||||||||||||||||  ||| ||| |||||||||    
T  23086218 ggtgaaaaactgcagaattcacgtagtctgacctgacgcaattcgccat 23086170  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #44
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 190 - 234
Target Start/End: Original strand, 23759974 - 23760018
Alignment:
Q  190 tttcgtgttcttgcgtcttttacacacgtttctgttttgaattgg 234  Q
    ||||| ||||||| ||||||| |||||||||||||||||||||||    
T  23759974 tttcgcgttcttgtgtctttttcacacgtttctgttttgaattgg 23760018  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #45
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 195 - 235
Target Start/End: Original strand, 23968966 - 23969006
Alignment:
Q  195 tgttcttgcgtcttttacacacgtttctgttttgaattggc 235  Q
    |||||||||||||||| |||| |||||||||||||||||||    
T  23968966 tgttcttgcgtctttttcacatgtttctgttttgaattggc 23969006  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #46
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 195 - 235
Target Start/End: Original strand, 36734828 - 36734868
Alignment:
Q  195 tgttcttgcgtcttttacacacgtttctgttttgaattggc 235  Q
    |||||||||||||||| || |||||||||||||||||||||    
T  36734828 tgttcttgcgtctttttcatacgtttctgttttgaattggc 36734868  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #47
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 188 - 232
Target Start/End: Complemental strand, 39682969 - 39682925
Alignment:
Q  188 tgtttcgtgttcttgcgtcttttacacacgtttctgttttgaatt 232  Q
    |||||| |||||||||||||||| ||||| |||||||||||||||    
T  39682969 tgtttcatgttcttgcgtctttttcacacatttctgttttgaatt 39682925  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #48
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 196 - 235
Target Start/End: Original strand, 6260722 - 6260761
Alignment:
Q  196 gttcttgcgtcttttacacacgtttctgttttgaattggc 235  Q
    ||||||| ||||||| ||||||||||||||||||||||||    
T  6260722 gttcttgtgtctttttcacacgtttctgttttgaattggc 6260761  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #49
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 196 - 235
Target Start/End: Complemental strand, 6483227 - 6483188
Alignment:
Q  196 gttcttgcgtcttttacacacgtttctgttttgaattggc 235  Q
    ||||||| ||||||| ||||||||||||||||||||||||    
T  6483227 gttcttgtgtctttttcacacgtttctgttttgaattggc 6483188  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #50
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 196 - 235
Target Start/End: Complemental strand, 6486694 - 6486655
Alignment:
Q  196 gttcttgcgtcttttacacacgtttctgttttgaattggc 235  Q
    ||||||| ||||||| ||||||||||||||||||||||||    
T  6486694 gttcttgtgtctttttcacacgtttctgttttgaattggc 6486655  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #51
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 186 - 229
Target Start/End: Complemental strand, 9785299 - 9785257
Alignment:
Q  186 cctgtttcgtgttcttgcgtcttttacacacgtttctgttttga 229  Q
    |||||||| |||||||||||||||| ||||||||||||||||||    
T  9785299 cctgtttcatgttcttgcgtctttt-cacacgtttctgttttga 9785257  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #52
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 187 - 230
Target Start/End: Original strand, 24897701 - 24897744
Alignment:
Q  187 ctgtttcgtgttcttgcgtcttttacacacgtttctgttttgaa 230  Q
    ||||||| |||||||||||||||| |||||||||| ||||||||    
T  24897701 ctgtttcatgttcttgcgtctttttcacacgtttccgttttgaa 24897744  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #53
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 187 - 230
Target Start/End: Original strand, 24900184 - 24900227
Alignment:
Q  187 ctgtttcgtgttcttgcgtcttttacacacgtttctgttttgaa 230  Q
    ||||||| |||||||||||||||| |||||||||| ||||||||    
T  24900184 ctgtttcatgttcttgcgtctttttcacacgtttccgttttgaa 24900227  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #54
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 187 - 230
Target Start/End: Original strand, 24902661 - 24902704
Alignment:
Q  187 ctgtttcgtgttcttgcgtcttttacacacgtttctgttttgaa 230  Q
    ||||||| |||||||||||||||| |||||||||| ||||||||    
T  24902661 ctgtttcatgttcttgcgtctttttcacacgtttccgttttgaa 24902704  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #55
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 187 - 230
Target Start/End: Original strand, 24905138 - 24905181
Alignment:
Q  187 ctgtttcgtgttcttgcgtcttttacacacgtttctgttttgaa 230  Q
    ||||||| |||||||||||||||| |||||||||| ||||||||    
T  24905138 ctgtttcatgttcttgcgtctttttcacacgtttccgttttgaa 24905181  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #56
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 187 - 230
Target Start/End: Original strand, 24907613 - 24907656
Alignment:
Q  187 ctgtttcgtgttcttgcgtcttttacacacgtttctgttttgaa 230  Q
    ||||||| |||||||||||||||| |||||||||| ||||||||    
T  24907613 ctgtttcatgttcttgcgtctttttcacacgtttccgttttgaa 24907656  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #57
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 186 - 232
Target Start/End: Complemental strand, 572055 - 572009
Alignment:
Q  186 cctgtttcgtgttcttgcgtcttttacacacgtttctgttttgaatt 232  Q
    |||||||| |||||||||||||||| || | ||||||||||||||||    
T  572055 cctgtttcatgttcttgcgtctttttcatatgtttctgttttgaatt 572009  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #58
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 196 - 234
Target Start/End: Complemental strand, 9242468 - 9242430
Alignment:
Q  196 gttcttgcgtcttttacacacgtttctgttttgaattgg 234  Q
    ||||||| ||||||| |||||||||||||||||||||||    
T  9242468 gttcttgtgtctttttcacacgtttctgttttgaattgg 9242430  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #59
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 185 - 235
Target Start/End: Original strand, 21132986 - 21133036
Alignment:
Q  185 ccctgtttcgtgttcttgcgtcttttacacacgtttctgttttgaattggc 235  Q
    ||||||||| ||||| || ||||||| |||||||||||||||||| |||||    
T  21132986 ccctgtttcatgttcgtgagtctttttcacacgtttctgttttgagttggc 21133036  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #60
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 183 - 233
Target Start/End: Original strand, 21335784 - 21335834
Alignment:
Q  183 tgccctgtttcgtgttcttgcgtcttttacacacgtttctgttttgaattg 233  Q
    ||||||||||| |||||||| ||||||| |||| |||| ||||||||||||    
T  21335784 tgccctgtttcatgttcttgtgtcttttgcacatgtttatgttttgaattg 21335834  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #61
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 186 - 232
Target Start/End: Complemental strand, 22690398 - 22690352
Alignment:
Q  186 cctgtttcgtgttcttgcgtcttttacacacgtttctgttttgaatt 232  Q
    |||||||| ||| ||| |||||||| |||||||||||||||||||||    
T  22690398 cctgtttcatgtacttacgtctttttcacacgtttctgttttgaatt 22690352  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #62
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 186 - 232
Target Start/End: Complemental strand, 22694994 - 22694948
Alignment:
Q  186 cctgtttcgtgttcttgcgtcttttacacacgtttctgttttgaatt 232  Q
    |||||||| ||| ||| |||||||| |||||||||||||||||||||    
T  22694994 cctgtttcatgtacttacgtctttttcacacgtttctgttttgaatt 22694948  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #63
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 197 - 235
Target Start/End: Complemental strand, 31345826 - 31345788
Alignment:
Q  197 ttcttgcgtcttttacacacgtttctgttttgaattggc 235  Q
    ||||||||| |||| ||||||||||||||||||||||||    
T  31345826 ttcttgcgtttttttcacacgtttctgttttgaattggc 31345788  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #64
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 188 - 230
Target Start/End: Complemental strand, 40912040 - 40911998
Alignment:
Q  188 tgtttcgtgttcttgcgtcttttacacacgtttctgttttgaa 230  Q
    |||||| |||||||||||||||| || ||||||||||||||||    
T  40912040 tgtttcatgttcttgcgtctttttcatacgtttctgttttgaa 40911998  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #65
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 197 - 234
Target Start/End: Original strand, 19887243 - 19887280
Alignment:
Q  197 ttcttgcgtcttttacacacgtttctgttttgaattgg 234  Q
    |||||| ||||||| |||||||||||||||||||||||    
T  19887243 ttcttgtgtctttttcacacgtttctgttttgaattgg 19887280  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #66
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 185 - 234
Target Start/End: Original strand, 23778628 - 23778677
Alignment:
Q  185 ccctgtttcgtgttcttgcgtcttttacacacgtttctgttttgaattgg 234  Q
    |||||||||| ||||||||||||||| |||   |||||||||||||||||    
T  23778628 ccctgtttcgcgttcttgcgtctttttcacctatttctgttttgaattgg 23778677  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #67
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 183 - 235
Target Start/End: Original strand, 21315993 - 21316045
Alignment:
Q  183 tgccctgtttcgtgttcttgcgtcttttacacacgtttctgttttgaattggc 235  Q
    |||||||||||  ||||||||||||||| |||| | || ||||||||||||||    
T  21315993 tgccctgtttcacgttcttgcgtcttttgcacatgcttatgttttgaattggc 21316045  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1160 (Bit Score: 46; Significance: 2e-17; HSPs: 1)
Name: scaffold1160
Description:

Target: scaffold1160; HSP #1
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 186 - 235
Target Start/End: Complemental strand, 403 - 354
Alignment:
Q  186 cctgtttcgtgttcttgcgtcttttacacacgtttctgttttgaattggc 235  Q
    |||||||| |||||||||||||||||||||||||||||||||||||||||    
T  403 cctgtttcatgttcttgcgtcttttacacacgtttctgttttgaattggc 354  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0217 (Bit Score: 45; Significance: 9e-17; HSPs: 1)
Name: scaffold0217
Description:

Target: scaffold0217; HSP #1
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 154 - 234
Target Start/End: Complemental strand, 28164 - 28084
Alignment:
Q  154 ttcgccttgcgaaatgttcagtggcagactgccctgtttcgtgttcttgcgtcttttacacacgtttctgttttgaattgg 234  Q
    ||||||| ||||| ||||||||||||| ||||||||||||| |||| ||||||| || ||||||||||| |||||| ||||    
T  28164 ttcgcctggcgaattgttcagtggcagcctgccctgtttcgcgttcctgcgtctgtttcacacgtttctattttgagttgg 28084  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold2015 (Bit Score: 43; Significance: 0.000000000000001; HSPs: 1)
Name: scaffold2015
Description:

Target: scaffold2015; HSP #1
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 185 - 235
Target Start/End: Original strand, 16 - 66
Alignment:
Q  185 ccctgtttcgtgttcttgcgtcttttacacacgtttctgttttgaattggc 235  Q
    ||||||||| |||||||||||||||| ||||||||||||||||||||||||    
T  16 ccctgtttcatgttcttgcgtctttttcacacgtttctgttttgaattggc 66  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0436 (Bit Score: 43; Significance: 0.000000000000001; HSPs: 1)
Name: scaffold0436
Description:

Target: scaffold0436; HSP #1
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 185 - 235
Target Start/End: Complemental strand, 8677 - 8627
Alignment:
Q  185 ccctgtttcgtgttcttgcgtcttttacacacgtttctgttttgaattggc 235  Q
    |||||||||| ||||||||||||||| ||||||||||||||||||||||||    
T  8677 ccctgtttcgcgttcttgcgtctttttcacacgtttctgttttgaattggc 8627  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0200 (Bit Score: 43; Significance: 0.000000000000001; HSPs: 1)
Name: scaffold0200
Description:

Target: scaffold0200; HSP #1
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 185 - 235
Target Start/End: Complemental strand, 18312 - 18262
Alignment:
Q  185 ccctgtttcgtgttcttgcgtcttttacacacgtttctgttttgaattggc 235  Q
    |||||||||| ||||||||||||||| ||||||||||||||||||||||||    
T  18312 ccctgtttcgcgttcttgcgtctttttcacacgtttctgttttgaattggc 18262  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0026 (Bit Score: 43; Significance: 0.000000000000001; HSPs: 4)
Name: scaffold0026
Description:

Target: scaffold0026; HSP #1
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 185 - 235
Target Start/End: Original strand, 123893 - 123943
Alignment:
Q  185 ccctgtttcgtgttcttgcgtcttttacacacgtttctgttttgaattggc 235  Q
    ||||||||| |||||||||||||||| ||||||||||||||||||||||||    
T  123893 ccctgtttcatgttcttgcgtctttttcacacgtttctgttttgaattggc 123943  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0026; HSP #2
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 186 - 235
Target Start/End: Complemental strand, 146450 - 146401
Alignment:
Q  186 cctgtttcgtgttcttgcgtcttttacacacgtttctgttttgaattggc 235  Q
    |||||||| ||||||||| |||||| |||||||| |||||||||||||||    
T  146450 cctgtttcatgttcttgcatctttttcacacgttcctgttttgaattggc 146401  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0026; HSP #3
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 195 - 235
Target Start/End: Complemental strand, 21790 - 21750
Alignment:
Q  195 tgttcttgcgtcttttacacacgtttctgttttgaattggc 235  Q
    |||||||||||||||| ||||||||| ||||||||||||||    
T  21790 tgttcttgcgtctttttcacacgtttttgttttgaattggc 21750  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0026; HSP #4
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 196 - 235
Target Start/End: Complemental strand, 111195 - 111156
Alignment:
Q  196 gttcttgcgtcttttacacacgtttctgttttgaattggc 235  Q
    ||||||| ||||||| ||||||||||||||||||||||||    
T  111195 gttcttgtgtctttttcacacgtttctgttttgaattggc 111156  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0737 (Bit Score: 42; Significance: 0.000000000000005; HSPs: 1)
Name: scaffold0737
Description:

Target: scaffold0737; HSP #1
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 186 - 235
Target Start/End: Original strand, 5047 - 5096
Alignment:
Q  186 cctgtttcgtgttcttgcgtcttttacacacgtttctgttttgaattggc 235  Q
    |||||||| |||||||||||||||| ||||||||||||||||||||||||    
T  5047 cctgtttcatgttcttgcgtctttttcacacgtttctgttttgaattggc 5096  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0385 (Bit Score: 42; Significance: 0.000000000000005; HSPs: 1)
Name: scaffold0385
Description:

Target: scaffold0385; HSP #1
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 186 - 235
Target Start/End: Complemental strand, 62 - 13
Alignment:
Q  186 cctgtttcgtgttcttgcgtcttttacacacgtttctgttttgaattggc 235  Q
    |||||||| |||||||||||||||| ||||||||||||||||||||||||    
T  62 cctgtttcatgttcttgcgtctttttcacacgtttctgttttgaattggc 13  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0048 (Bit Score: 42; Significance: 0.000000000000005; HSPs: 1)
Name: scaffold0048
Description:

Target: scaffold0048; HSP #1
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 186 - 235
Target Start/End: Complemental strand, 56694 - 56645
Alignment:
Q  186 cctgtttcgtgttcttgcgtcttttacacacgtttctgttttgaattggc 235  Q
    |||||||| |||||||||||||||| ||||||||||||||||||||||||    
T  56694 cctgtttcatgttcttgcgtctttttcacacgtttctgttttgaattggc 56645  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0577 (Bit Score: 41; Significance: 0.00000000000002; HSPs: 1)
Name: scaffold0577
Description:

Target: scaffold0577; HSP #1
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 185 - 233
Target Start/End: Complemental strand, 6166 - 6118
Alignment:
Q  185 ccctgtttcgtgttcttgcgtcttttacacacgtttctgttttgaattg 233  Q
    ||||||||| |||||||||||||||| ||||||||||||||||||||||    
T  6166 ccctgtttcatgttcttgcgtctttttcacacgtttctgttttgaattg 6118  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0546 (Bit Score: 41; Significance: 0.00000000000002; HSPs: 2)
Name: scaffold0546
Description:

Target: scaffold0546; HSP #1
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 185 - 233
Target Start/End: Original strand, 10250 - 10298
Alignment:
Q  185 ccctgtttcgtgttcttgcgtcttttacacacgtttctgttttgaattg 233  Q
    ||||||||| |||||||||||||||| ||||||||||||||||||||||    
T  10250 ccctgtttcatgttcttgcgtctttttcacacgtttctgttttgaattg 10298  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0546; HSP #2
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 188 - 232
Target Start/End: Complemental strand, 7691 - 7647
Alignment:
Q  188 tgtttcgtgttcttgcgtcttttacacacgtttctgttttgaatt 232  Q
    |||||| |||||||||||||||| || ||||||||||||||||||    
T  7691 tgtttcatgttcttgcgtctttttcatacgtttctgttttgaatt 7647  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0109 (Bit Score: 41; Significance: 0.00000000000002; HSPs: 3)
Name: scaffold0109
Description:

Target: scaffold0109; HSP #1
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 185 - 233
Target Start/End: Complemental strand, 3057 - 3009
Alignment:
Q  185 ccctgtttcgtgttcttgcgtcttttacacacgtttctgttttgaattg 233  Q
    ||||||||| |||||||||||||||| ||||||||||||||||||||||    
T  3057 ccctgtttcatgttcttgcgtctttttcacacgtttctgttttgaattg 3009  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0109; HSP #2
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 188 - 232
Target Start/End: Original strand, 314 - 358
Alignment:
Q  188 tgtttcgtgttcttgcgtcttttacacacgtttctgttttgaatt 232  Q
    |||||| |||||||||||||||| |||||||||||||||||||||    
T  314 tgtttcatgttcttgcgtctttttcacacgtttctgttttgaatt 358  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0109; HSP #3
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 188 - 232
Target Start/End: Original strand, 5616 - 5660
Alignment:
Q  188 tgtttcgtgttcttgcgtcttttacacacgtttctgttttgaatt 232  Q
    |||||| |||||||||||||||| || ||||||||||||||||||    
T  5616 tgtttcatgttcttgcgtctttttcatacgtttctgttttgaatt 5660  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0108 (Bit Score: 41; Significance: 0.00000000000002; HSPs: 2)
Name: scaffold0108
Description:

Target: scaffold0108; HSP #1
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 183 - 235
Target Start/End: Original strand, 7114 - 7166
Alignment:
Q  183 tgccctgtttcgtgttcttgcgtcttttacacacgtttctgttttgaattggc 235  Q
    |||||| |||| |||||||||||||||| ||||||||||||||||||||||||    
T  7114 tgccctatttcatgttcttgcgtctttttcacacgtttctgttttgaattggc 7166  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0108; HSP #2
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 190 - 235
Target Start/End: Complemental strand, 6131 - 6086
Alignment:
Q  190 tttcgtgttcttgcgtcttttacacacgtttctgttttgaattggc 235  Q
    |||| |||||||||||||||| ||||||||||||||||||||||||    
T  6131 tttcatgttcttgcgtctttttcacacgtttctgttttgaattggc 6086  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0077 (Bit Score: 41; Significance: 0.00000000000002; HSPs: 5)
Name: scaffold0077
Description:

Target: scaffold0077; HSP #1
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 185 - 233
Target Start/End: Original strand, 17590 - 17638
Alignment:
Q  185 ccctgtttcgtgttcttgcgtcttttacacacgtttctgttttgaattg 233  Q
    |||||||||||||||||| ||||||| ||||||||||||||||||||||    
T  17590 ccctgtttcgtgttcttgtgtctttttcacacgtttctgttttgaattg 17638  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0077; HSP #2
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 187 - 235
Target Start/End: Complemental strand, 40120 - 40072
Alignment:
Q  187 ctgtttcgtgttcttgcgtcttttacacacgtttctgttttgaattggc 235  Q
    ||||||| |||||||||||||||| ||||||||||||||||||||||||    
T  40120 ctgtttcatgttcttgcgtctttttcacacgtttctgttttgaattggc 40072  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0077; HSP #3
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 188 - 235
Target Start/End: Complemental strand, 34055 - 34008
Alignment:
Q  188 tgtttcgtgttcttgcgtcttttacacacgtttctgttttgaattggc 235  Q
    |||||| |||||||||||||||| ||||||||||||||||||||||||    
T  34055 tgtttcatgttcttgcgtctttttcacacgtttctgttttgaattggc 34008  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0077; HSP #4
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 185 - 233
Target Start/End: Original strand, 22512 - 22560
Alignment:
Q  185 ccctgtttcgtgttcttgcgtcttttacacacgtttctgttttgaattg 233  Q
    |||| |||| |||||||||||||||| ||||||||||||||||||||||    
T  22512 ccctatttcatgttcttgcgtctttttcacacgtttctgttttgaattg 22560  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0077; HSP #5
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 185 - 233
Target Start/End: Complemental strand, 23287 - 23240
Alignment:
Q  185 ccctgtttcgtgttcttgcgtcttttacacacgtttctgttttgaattg 233  Q
    ||||||||| |||||||||||||||| |||| |||||||||||||||||    
T  23287 ccctgtttcatgttcttgcgtctttttcaca-gtttctgttttgaattg 23240  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0058 (Bit Score: 41; Significance: 0.00000000000002; HSPs: 2)
Name: scaffold0058
Description:

Target: scaffold0058; HSP #1
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 155 - 227
Target Start/End: Original strand, 60270 - 60342
Alignment:
Q  155 tcgccttgcgaaatgttcagtggcagactgccctgtttcgtgttcttgcgtcttttacacacgtttctgtttt 227  Q
    |||||| ||||| ||||||||||||| ||||||||||||| ||||||| || | || ||||||||||||||||    
T  60270 tcgcctcgcgaattgttcagtggcagcctgccctgtttcgcgttcttgtgtttgtttcacacgtttctgtttt 60342  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0058; HSP #2
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 185 - 235
Target Start/End: Complemental strand, 6177 - 6127
Alignment:
Q  185 ccctgtttcgtgttcttgcgtcttttacacacgtttctgttttgaattggc 235  Q
    |||| ||||| ||||||||||| ||| ||||||||||||||||||||||||    
T  6177 ccctatttcgcgttcttgcgtccttttcacacgtttctgttttgaattggc 6127  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0004 (Bit Score: 41; Significance: 0.00000000000002; HSPs: 2)
Name: scaffold0004
Description:

Target: scaffold0004; HSP #1
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 183 - 235
Target Start/End: Original strand, 66363 - 66415
Alignment:
Q  183 tgccctgtttcgtgttcttgcgtcttttacacacgtttctgttttgaattggc 235  Q
    ||||||||||| ||||||| |||||||| ||||||||||||||||||||||||    
T  66363 tgccctgtttcatgttcttacgtctttttcacacgtttctgttttgaattggc 66415  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0004; HSP #2
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 173 - 231
Target Start/End: Complemental strand, 75072 - 75014
Alignment:
Q  173 agtggcagactgccctgtttcgtgttcttgcgtcttttacacacgtttctgttttgaat 231  Q
    |||||||| ||||| ||||||| |||||||||||| || || || ||||||||||||||    
T  75072 agtggcagtctgccatgtttcgcgttcttgcgtctgtttcatacatttctgttttgaat 75014  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0138 (Bit Score: 40; Significance: 0.00000000000009; HSPs: 1)
Name: scaffold0138
Description:

Target: scaffold0138; HSP #1
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 188 - 235
Target Start/End: Complemental strand, 33827 - 33780
Alignment:
Q  188 tgtttcgtgttcttgcgtcttttacacacgtttctgttttgaattggc 235  Q
    ||||||| ||||||||||||||| ||||||||||||||||||||||||    
T  33827 tgtttcgcgttcttgcgtctttttcacacgtttctgttttgaattggc 33780  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0444 (Bit Score: 39; Significance: 0.0000000000003; HSPs: 1)
Name: scaffold0444
Description:

Target: scaffold0444; HSP #1
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 186 - 232
Target Start/End: Complemental strand, 14050 - 14004
Alignment:
Q  186 cctgtttcgtgttcttgcgtcttttacacacgtttctgttttgaatt 232  Q
    |||||||| |||||||||||||||| |||||||||||||||||||||    
T  14050 cctgtttcatgttcttgcgtctttttcacacgtttctgttttgaatt 14004  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0328 (Bit Score: 39; Significance: 0.0000000000003; HSPs: 1)
Name: scaffold0328
Description:

Target: scaffold0328; HSP #1
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 185 - 235
Target Start/End: Original strand, 18977 - 19027
Alignment:
Q  185 ccctgtttcgtgttcttgcgtcttttacacacgtttctgttttgaattggc 235  Q
    |||||||||| ||||||||||||||| | ||||||||||||||||||||||    
T  18977 ccctgtttcgcgttcttgcgtctttttctcacgtttctgttttgaattggc 19027  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0293 (Bit Score: 39; Significance: 0.0000000000003; HSPs: 1)
Name: scaffold0293
Description:

Target: scaffold0293; HSP #1
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 185 - 235
Target Start/End: Original strand, 19592 - 19642
Alignment:
Q  185 ccctgtttcgtgttcttgcgtcttttacacacgtttctgttttgaattggc 235  Q
    |||||||||| ||||||||||||||| ||| ||||||||||||||||||||    
T  19592 ccctgtttcgcgttcttgcgtctttttcacgcgtttctgttttgaattggc 19642  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0203 (Bit Score: 39; Significance: 0.0000000000003; HSPs: 1)
Name: scaffold0203
Description:

Target: scaffold0203; HSP #1
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 186 - 232
Target Start/End: Original strand, 18460 - 18506
Alignment:
Q  186 cctgtttcgtgttcttgcgtcttttacacacgtttctgttttgaatt 232  Q
    |||||||| |||||||||||||||| |||||||||||||||||||||    
T  18460 cctgtttcatgttcttgcgtctttttcacacgtttctgttttgaatt 18506  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0134 (Bit Score: 39; Significance: 0.0000000000003; HSPs: 1)
Name: scaffold0134
Description:

Target: scaffold0134; HSP #1
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 186 - 232
Target Start/End: Complemental strand, 38479 - 38433
Alignment:
Q  186 cctgtttcgtgttcttgcgtcttttacacacgtttctgttttgaatt 232  Q
    |||||||| |||||||||||||||| |||||||||||||||||||||    
T  38479 cctgtttcatgttcttgcgtctttttcacacgtttctgttttgaatt 38433  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0044 (Bit Score: 39; Significance: 0.0000000000003; HSPs: 2)
Name: scaffold0044
Description:

Target: scaffold0044; HSP #1
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 186 - 232
Target Start/End: Complemental strand, 41057 - 41011
Alignment:
Q  186 cctgtttcgtgttcttgcgtcttttacacacgtttctgttttgaatt 232  Q
    ||||||||||||||||||||||||| || ||||||||||||||||||    
T  41057 cctgtttcgtgttcttgcgtctttttcatacgtttctgttttgaatt 41011  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0044; HSP #2
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 190 - 235
Target Start/End: Complemental strand, 38007 - 37962
Alignment:
Q  190 tttcgtgttcttgcgtcttttacacacgtttctgttttgaattggc 235  Q
    ||||||||||||| ||||||| |||||||||||  |||||||||||    
T  38007 tttcgtgttcttgtgtctttttcacacgtttctactttgaattggc 37962  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1766 (Bit Score: 38; Significance: 0.000000000001; HSPs: 1)
Name: scaffold1766
Description:

Target: scaffold1766; HSP #1
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 186 - 235
Target Start/End: Original strand, 1030 - 1079
Alignment:
Q  186 cctgtttcgtgttcttgcgtcttttacacacgtttctgttttgaattggc 235  Q
    |||||||| ||||||||||||||||  |||||||||||||||||||||||    
T  1030 cctgtttcatgttcttgcgtctttttaacacgtttctgttttgaattggc 1079  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1283 (Bit Score: 38; Significance: 0.000000000001; HSPs: 1)
Name: scaffold1283
Description:

Target: scaffold1283; HSP #1
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 188 - 233
Target Start/End: Original strand, 803 - 848
Alignment:
Q  188 tgtttcgtgttcttgcgtcttttacacacgtttctgttttgaattg 233  Q
    |||||| |||||||||||||||| ||||||||||||||||||||||    
T  803 tgtttcatgttcttgcgtctttttcacacgtttctgttttgaattg 848  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0462 (Bit Score: 38; Significance: 0.000000000001; HSPs: 3)
Name: scaffold0462
Description:

Target: scaffold0462; HSP #1
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 186 - 235
Target Start/End: Complemental strand, 10939 - 10890
Alignment:
Q  186 cctgtttcgtgttcttgcgtcttttacacacgtttctgttttgaattggc 235  Q
    ||||||||| |||||||| |||||| ||||||||||||||||||||||||    
T  10939 cctgtttcgcgttcttgcatctttttcacacgtttctgttttgaattggc 10890  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0462; HSP #2
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 186 - 235
Target Start/End: Complemental strand, 1037 - 987
Alignment:
Q  186 cctgtttcgtgttcttgcgtctttta-cacacgtttctgttttgaattggc 235  Q
    |||||||| ||||||||||| ||||  ||||||||||||||||||||||||    
T  1037 cctgtttcatgttcttgcgttttttttcacacgtttctgttttgaattggc 987  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0462; HSP #3
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 186 - 235
Target Start/End: Complemental strand, 6543 - 6493
Alignment:
Q  186 cctgtttcgtgttcttgcgtctttta-cacacgtttctgttttgaattggc 235  Q
    |||||||| ||||||||||| ||||  ||||||||||||||||||||||||    
T  6543 cctgtttcatgttcttgcgttttttttcacacgtttctgttttgaattggc 6493  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0431 (Bit Score: 38; Significance: 0.000000000001; HSPs: 1)
Name: scaffold0431
Description:

Target: scaffold0431; HSP #1
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 190 - 235
Target Start/End: Complemental strand, 5343 - 5298
Alignment:
Q  190 tttcgtgttcttgcgtcttttacacacgtttctgttttgaattggc 235  Q
    |||| |||||||||||||||| ||||||||||||||||||||||||    
T  5343 tttcatgttcttgcgtctttttcacacgtttctgttttgaattggc 5298  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0422 (Bit Score: 38; Significance: 0.000000000001; HSPs: 1)
Name: scaffold0422
Description:

Target: scaffold0422; HSP #1
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 186 - 235
Target Start/End: Complemental strand, 3681 - 3632
Alignment:
Q  186 cctgtttcgtgttcttgcgtcttttacacacgtttctgttttgaattggc 235  Q
    ||||||||  ||||||||||||||| ||||||||||||||||||||||||    
T  3681 cctgtttcacgttcttgcgtctttttcacacgtttctgttttgaattggc 3632  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0414 (Bit Score: 38; Significance: 0.000000000001; HSPs: 1)
Name: scaffold0414
Description:

Target: scaffold0414; HSP #1
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 186 - 235
Target Start/End: Original strand, 11681 - 11730
Alignment:
Q  186 cctgtttcgtgttcttgcgtcttttacacacgtttctgttttgaattggc 235  Q
    |||||||| |||||||||||||||| | ||||||||||||||||||||||    
T  11681 cctgtttcatgttcttgcgtctttttctcacgtttctgttttgaattggc 11730  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0292 (Bit Score: 38; Significance: 0.000000000001; HSPs: 1)
Name: scaffold0292
Description:

Target: scaffold0292; HSP #1
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 190 - 235
Target Start/End: Complemental strand, 7227 - 7182
Alignment:
Q  190 tttcgtgttcttgcgtcttttacacacgtttctgttttgaattggc 235  Q
    |||| |||||||||||||||| ||||||||||||||||||||||||    
T  7227 tttcatgttcttgcgtctttttcacacgtttctgttttgaattggc 7182  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0205 (Bit Score: 38; Significance: 0.000000000001; HSPs: 1)
Name: scaffold0205
Description:

Target: scaffold0205; HSP #1
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 190 - 235
Target Start/End: Complemental strand, 30326 - 30281
Alignment:
Q  190 tttcgtgttcttgcgtcttttacacacgtttctgttttgaattggc 235  Q
    |||| |||||||||||||||| ||||||||||||||||||||||||    
T  30326 tttcatgttcttgcgtctttttcacacgtttctgttttgaattggc 30281  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0180 (Bit Score: 38; Significance: 0.000000000001; HSPs: 1)
Name: scaffold0180
Description:

Target: scaffold0180; HSP #1
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 186 - 235
Target Start/End: Complemental strand, 10153 - 10104
Alignment:
Q  186 cctgtttcgtgttcttgcgtcttttacacacgtttctgttttgaattggc 235  Q
    |||||||| |||||||||||||||| ||||||||| ||||||||||||||    
T  10153 cctgtttcatgttcttgcgtctttttcacacgtttttgttttgaattggc 10104  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0051 (Bit Score: 38; Significance: 0.000000000001; HSPs: 2)
Name: scaffold0051
Description:

Target: scaffold0051; HSP #1
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 185 - 234
Target Start/End: Complemental strand, 31862 - 31813
Alignment:
Q  185 ccctgtttcgtgttcttgcgtcttttacacacgtttctgttttgaattgg 234  Q
    |||||||||| |||||| |||||||| |||||||||||||||||||||||    
T  31862 ccctgtttcgcgttctttcgtctttttcacacgtttctgttttgaattgg 31813  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0051; HSP #2
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 195 - 235
Target Start/End: Original strand, 64412 - 64452
Alignment:
Q  195 tgttcttgcgtcttttacacacgtttctgttttgaattggc 235  Q
    |||||||||||||||| ||||||||||||||||||||||||    
T  64412 tgttcttgcgtctttttcacacgtttctgttttgaattggc 64452  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0047 (Bit Score: 38; Significance: 0.000000000001; HSPs: 1)
Name: scaffold0047
Description:

Target: scaffold0047; HSP #1
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 186 - 235
Target Start/End: Complemental strand, 78782 - 78733
Alignment:
Q  186 cctgtttcgtgttcttgcgtcttttacacacgtttctgttttgaattggc 235  Q
    |||||||| ||||||||| |||||| ||||||||||||||||||||||||    
T  78782 cctgtttcatgttcttgcatctttttcacacgtttctgttttgaattggc 78733  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0020 (Bit Score: 38; Significance: 0.000000000001; HSPs: 2)
Name: scaffold0020
Description:

Target: scaffold0020; HSP #1
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 186 - 235
Target Start/End: Original strand, 169333 - 169382
Alignment:
Q  186 cctgtttcgtgttcttgcgtcttttacacacgtttctgttttgaattggc 235  Q
    |||||||| ||||||||||||||||  |||||||||||||||||||||||    
T  169333 cctgtttcatgttcttgcgtctttttaacacgtttctgttttgaattggc 169382  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0020; HSP #2
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 188 - 235
Target Start/End: Complemental strand, 143329 - 143282
Alignment:
Q  188 tgtttcgtgttcttgcgtcttttacacacgtttctgttttgaattggc 235  Q
    |||||| |||||||||||||||| |||| |||||||||||||||||||    
T  143329 tgtttcatgttcttgcgtctttttcacatgtttctgttttgaattggc 143282  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0005 (Bit Score: 38; Significance: 0.000000000001; HSPs: 1)
Name: scaffold0005
Description:

Target: scaffold0005; HSP #1
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 186 - 235
Target Start/End: Original strand, 186839 - 186888
Alignment:
Q  186 cctgtttcgtgttcttgcgtcttttacacacgtttctgttttgaattggc 235  Q
    |||||||| |||||||||||||||| |||||||||||||||||| |||||    
T  186839 cctgtttcatgttcttgcgtctttttcacacgtttctgttttgatttggc 186888  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0098 (Bit Score: 37; Significance: 0.000000000005; HSPs: 1)
Name: scaffold0098
Description:

Target: scaffold0098; HSP #1
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 183 - 235
Target Start/End: Complemental strand, 39820 - 39768
Alignment:
Q  183 tgccctgtttcgtgttcttgcgtcttttacacacgtttctgttttgaattggc 235  Q
    ||||||||||| ||||||||| | |||| ||||||||||||||||||||||||    
T  39820 tgccctgtttcatgttcttgcatttttttcacacgtttctgttttgaattggc 39768  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1186 (Bit Score: 36; Significance: 0.00000000002; HSPs: 1)
Name: scaffold1186
Description:

Target: scaffold1186; HSP #1
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 186 - 229
Target Start/End: Complemental strand, 1429 - 1386
Alignment:
Q  186 cctgtttcgtgttcttgcgtcttttacacacgtttctgttttga 229  Q
    |||||||| |||||||||||||||| ||||||||||||||||||    
T  1429 cctgtttcatgttcttgcgtctttttcacacgtttctgttttga 1386  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0635 (Bit Score: 36; Significance: 0.00000000002; HSPs: 1)
Name: scaffold0635
Description:

Target: scaffold0635; HSP #1
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 188 - 235
Target Start/End: Complemental strand, 7600 - 7553
Alignment:
Q  188 tgtttcgtgttcttgcgtcttttacacacgtttctgttttgaattggc 235  Q
    |||||| |||||||||||||||| |||||||||||||| |||||||||    
T  7600 tgtttcatgttcttgcgtctttttcacacgtttctgttctgaattggc 7553  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0452 (Bit Score: 36; Significance: 0.00000000002; HSPs: 1)
Name: scaffold0452
Description:

Target: scaffold0452; HSP #1
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 190 - 233
Target Start/End: Original strand, 13003 - 13046
Alignment:
Q  190 tttcgtgttcttgcgtcttttacacacgtttctgttttgaattg 233  Q
    |||| |||||||||||||||| ||||||||||||||||||||||    
T  13003 tttcatgttcttgcgtctttttcacacgtttctgttttgaattg 13046  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0401 (Bit Score: 36; Significance: 0.00000000002; HSPs: 1)
Name: scaffold0401
Description:

Target: scaffold0401; HSP #1
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 188 - 235
Target Start/End: Complemental strand, 8536 - 8489
Alignment:
Q  188 tgtttcgtgttcttgcgtcttttacacacgtttctgttttgaattggc 235  Q
    |||||| |||||||||||||||| |||||||||| |||||||||||||    
T  8536 tgtttcttgttcttgcgtctttttcacacgtttccgttttgaattggc 8489  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0162 (Bit Score: 36; Significance: 0.00000000002; HSPs: 1)
Name: scaffold0162
Description:

Target: scaffold0162; HSP #1
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 187 - 234
Target Start/End: Original strand, 24398 - 24445
Alignment:
Q  187 ctgtttcgtgttcttgcgtcttttacacacgtttctgttttgaattgg 234  Q
    ||||||| |||||||||||||||| ||| |||||||||||||||||||    
T  24398 ctgtttcatgttcttgcgtctttttcacccgtttctgttttgaattgg 24445  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0080 (Bit Score: 36; Significance: 0.00000000002; HSPs: 1)
Name: scaffold0080
Description:

Target: scaffold0080; HSP #1
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 186 - 233
Target Start/End: Original strand, 22125 - 22172
Alignment:
Q  186 cctgtttcgtgttcttgcgtcttttacacacgtttctgttttgaattg 233  Q
    |||||||| ||||||||| |||||| ||||||||||||||||||||||    
T  22125 cctgtttcatgttcttgcatctttttcacacgtttctgttttgaattg 22172  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0046 (Bit Score: 36; Significance: 0.00000000002; HSPs: 1)
Name: scaffold0046
Description:

Target: scaffold0046; HSP #1
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 188 - 235
Target Start/End: Original strand, 22105 - 22152
Alignment:
Q  188 tgtttcgtgttcttgcgtcttttacacacgtttctgttttgaattggc 235  Q
    ||||||| ||||||||||||||| |||| |||||||||||||||||||    
T  22105 tgtttcgcgttcttgcgtctttttcacatgtttctgttttgaattggc 22152  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0034 (Bit Score: 36; Significance: 0.00000000002; HSPs: 2)
Name: scaffold0034
Description:

Target: scaffold0034; HSP #1
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 188 - 235
Target Start/End: Complemental strand, 120626 - 120579
Alignment:
Q  188 tgtttcgtgttcttgcgtcttttacacacgtttctgttttgaattggc 235  Q
    |||||| |||||||||||||||| |||||| |||||||||||||||||    
T  120626 tgtttcatgttcttgcgtctttttcacacgcttctgttttgaattggc 120579  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0034; HSP #2
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 185 - 235
Target Start/End: Original strand, 29530 - 29580
Alignment:
Q  185 ccctgtttcgtgttcttgcgtcttttacacacgtttctgttttgaattggc 235  Q
    |||||||||| ||||||| ||||||  ||||||||||||||||||||||||    
T  29530 ccctgtttcgcgttcttgtgtctttgtcacacgtttctgttttgaattggc 29580  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0515 (Bit Score: 35; Significance: 0.00000000008; HSPs: 1)
Name: scaffold0515
Description:

Target: scaffold0515; HSP #1
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 185 - 235
Target Start/End: Complemental strand, 4753 - 4703
Alignment:
Q  185 ccctgtttcgtgttcttgcgtcttttacacacgtttctgttttgaattggc 235  Q
    |||||||||  ||||||||||||||| ||||||||| ||||||||||||||    
T  4753 ccctgtttcacgttcttgcgtctttttcacacgtttttgttttgaattggc 4703  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0468 (Bit Score: 35; Significance: 0.00000000008; HSPs: 1)
Name: scaffold0468
Description:

Target: scaffold0468; HSP #1
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 185 - 235
Target Start/End: Original strand, 11551 - 11601
Alignment:
Q  185 ccctgtttcgtgttcttgcgtcttttacacacgtttctgttttgaattggc 235  Q
    |||||||||| ||||||||||||||  ||||| ||||||||||||||||||    
T  11551 ccctgtttcgcgttcttgcgtctttgtcacacatttctgttttgaattggc 11601  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0407 (Bit Score: 35; Significance: 0.00000000008; HSPs: 1)
Name: scaffold0407
Description:

Target: scaffold0407; HSP #1
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 186 - 232
Target Start/End: Original strand, 11608 - 11654
Alignment:
Q  186 cctgtttcgtgttcttgcgtcttttacacacgtttctgttttgaatt 232  Q
    ||||||||  ||||||||||||||| |||||||||||||||||||||    
T  11608 cctgtttcacgttcttgcgtctttttcacacgtttctgttttgaatt 11654  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0306 (Bit Score: 35; Significance: 0.00000000008; HSPs: 1)
Name: scaffold0306
Description:

Target: scaffold0306; HSP #1
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 185 - 235
Target Start/End: Complemental strand, 4753 - 4703
Alignment:
Q  185 ccctgtttcgtgttcttgcgtcttttacacacgtttctgttttgaattggc 235  Q
    |||||||||  ||||||||||||||| ||||||||| ||||||||||||||    
T  4753 ccctgtttcacgttcttgcgtctttttcacacgtttttgttttgaattggc 4703  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0054 (Bit Score: 35; Significance: 0.00000000008; HSPs: 1)
Name: scaffold0054
Description:

Target: scaffold0054; HSP #1
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 186 - 232
Target Start/End: Original strand, 65315 - 65361
Alignment:
Q  186 cctgtttcgtgttcttgcgtcttttacacacgtttctgttttgaatt 232  Q
    |||||||| ||||||| |||||||| |||||||||||||||||||||    
T  65315 cctgtttcatgttctttcgtctttttcacacgtttctgttttgaatt 65361  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0040 (Bit Score: 35; Significance: 0.00000000008; HSPs: 2)
Name: scaffold0040
Description:

Target: scaffold0040; HSP #1
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 186 - 232
Target Start/End: Original strand, 13324 - 13370
Alignment:
Q  186 cctgtttcgtgttcttgcgtcttttacacacgtttctgttttgaatt 232  Q
    |||||||| |||||||||||||||| ||||||||| |||||||||||    
T  13324 cctgtttcatgttcttgcgtctttttcacacgtttttgttttgaatt 13370  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0040; HSP #2
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 186 - 231
Target Start/End: Original strand, 106537 - 106582
Alignment:
Q  186 cctgtttcgtgttcttgcgtcttttacacacgtttctgttttgaat 231  Q
    |||||||  |||||||||||||||| ||||||||||||||||||||    
T  106537 cctgttttatgttcttgcgtctttttcacacgtttctgttttgaat 106582  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0039 (Bit Score: 35; Significance: 0.00000000008; HSPs: 1)
Name: scaffold0039
Description:

Target: scaffold0039; HSP #1
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 186 - 232
Target Start/End: Original strand, 10263 - 10309
Alignment:
Q  186 cctgtttcgtgttcttgcgtcttttacacacgtttctgttttgaatt 232  Q
    |||||||| |||||||||||||||| ||| |||||||||||||||||    
T  10263 cctgtttcatgttcttgcgtctttttcacccgtttctgttttgaatt 10309  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0018 (Bit Score: 35; Significance: 0.00000000008; HSPs: 1)
Name: scaffold0018
Description:

Target: scaffold0018; HSP #1
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 186 - 232
Target Start/End: Complemental strand, 21370 - 21324
Alignment:
Q  186 cctgtttcgtgttcttgcgtcttttacacacgtttctgttttgaatt 232  Q
    |||||||| ||||||||| |||||| |||||||||||||||||||||    
T  21370 cctgtttcttgttcttgcatctttttcacacgtttctgttttgaatt 21324  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1404 (Bit Score: 34; Significance: 0.0000000003; HSPs: 1)
Name: scaffold1404
Description:

Target: scaffold1404; HSP #1
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 190 - 235
Target Start/End: Complemental strand, 1523 - 1478
Alignment:
Q  190 tttcgtgttcttgcgtcttttacacacgtttctgttttgaattggc 235  Q
    ||||| ||||||| ||||||| ||||||||||||||||||||||||    
T  1523 tttcgcgttcttgtgtctttttcacacgtttctgttttgaattggc 1478  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0599 (Bit Score: 34; Significance: 0.0000000003; HSPs: 1)
Name: scaffold0599
Description:

Target: scaffold0599; HSP #1
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 188 - 229
Target Start/End: Complemental strand, 713 - 672
Alignment:
Q  188 tgtttcgtgttcttgcgtcttttacacacgtttctgttttga 229  Q
    |||||| |||||||||||||||| ||||||||||||||||||    
T  713 tgtttcatgttcttgcgtctttttcacacgtttctgttttga 672  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0241 (Bit Score: 34; Significance: 0.0000000003; HSPs: 1)
Name: scaffold0241
Description:

Target: scaffold0241; HSP #1
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 186 - 235
Target Start/End: Complemental strand, 2282 - 2233
Alignment:
Q  186 cctgtttcgtgttcttgcgtcttttacacacgtttctgttttgaattggc 235  Q
    |||| ||| |||||||||||||||| ||||||||||| ||||||||||||    
T  2282 cctgcttcatgttcttgcgtctttttcacacgtttctcttttgaattggc 2233  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0213 (Bit Score: 34; Significance: 0.0000000003; HSPs: 1)
Name: scaffold0213
Description:

Target: scaffold0213; HSP #1
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 186 - 235
Target Start/End: Complemental strand, 18882 - 18833
Alignment:
Q  186 cctgtttcgtgttcttgcgtcttttacacacgtttctgttttgaattggc 235  Q
    |||||||| |||||||||||||||| | ||| ||||||||||||||||||    
T  18882 cctgtttcatgttcttgcgtctttttcccacatttctgttttgaattggc 18833  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0174 (Bit Score: 34; Significance: 0.0000000003; HSPs: 2)
Name: scaffold0174
Description:

Target: scaffold0174; HSP #1
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 185 - 234
Target Start/End: Original strand, 20407 - 20456
Alignment:
Q  185 ccctgtttcgtgttcttgcgtcttttacacacgtttctgttttgaattgg 234  Q
    |||||||||| ||||| |||| |||| |||||||||||||||||||||||    
T  20407 ccctgtttcgcgttctcgcgtttttttcacacgtttctgttttgaattgg 20456  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0174; HSP #2
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 172 - 232
Target Start/End: Complemental strand, 15697 - 15637
Alignment:
Q  172 cagtggcagactgccctgtttcgtgttcttgcgtcttttacacacgtttctgttttgaatt 232  Q
    ||||||||| ||||| ||||| | |||||||||||| || || ||||||||||||||||||    
T  15697 cagtggcagtctgccatgttttgcgttcttgcgtctgtttcatacgtttctgttttgaatt 15637  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0127 (Bit Score: 34; Significance: 0.0000000003; HSPs: 1)
Name: scaffold0127
Description:

Target: scaffold0127; HSP #1
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 194 - 235
Target Start/End: Complemental strand, 9750 - 9709
Alignment:
Q  194 gtgttcttgcgtcttttacacacgtttctgttttgaattggc 235  Q
    ||||||||| ||||||| ||||||||||||||||||||||||    
T  9750 gtgttcttgtgtctttttcacacgtttctgttttgaattggc 9709  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0029 (Bit Score: 34; Significance: 0.0000000003; HSPs: 1)
Name: scaffold0029
Description:

Target: scaffold0029; HSP #1
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 187 - 232
Target Start/End: Complemental strand, 11946 - 11901
Alignment:
Q  187 ctgtttcgtgttcttgcgtcttttacacacgtttctgttttgaatt 232  Q
    ||||||| |||||||||||||||| |||| ||||||||||||||||    
T  11946 ctgtttcatgttcttgcgtctttttcacatgtttctgttttgaatt 11901  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0011 (Bit Score: 34; Significance: 0.0000000003; HSPs: 2)
Name: scaffold0011
Description:

Target: scaffold0011; HSP #1
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 186 - 235
Target Start/End: Complemental strand, 126466 - 126417
Alignment:
Q  186 cctgtttcgtgttcttgcgtcttttacacacgtttctgttttgaattggc 235  Q
    |||||||| | ||||||| |||||| ||||||||||||||||||||||||    
T  126466 cctgtttcatattcttgcatcttttccacacgtttctgttttgaattggc 126417  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0011; HSP #2
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 186 - 235
Target Start/End: Complemental strand, 33171 - 33122
Alignment:
Q  186 cctgtttcgtgttcttgcgtcttttacacacgtttctgttttgaattggc 235  Q
    |||||| | |||||||| ||||||| ||||||||||| ||||||||||||    
T  33171 cctgttacatgttcttgtgtctttttcacacgtttctattttgaattggc 33122  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0676 (Bit Score: 33; Significance: 0.000000001; HSPs: 1)
Name: scaffold0676
Description:

Target: scaffold0676; HSP #1
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 195 - 235
Target Start/End: Complemental strand, 2596 - 2556
Alignment:
Q  195 tgttcttgcgtcttttacacacgtttctgttttgaattggc 235  Q
    |||||||||||| ||| ||||||||||||||||||||||||    
T  2596 tgttcttgcgtccttttcacacgtttctgttttgaattggc 2556  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0334 (Bit Score: 33; Significance: 0.000000001; HSPs: 2)
Name: scaffold0334
Description:

Target: scaffold0334; HSP #1
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 185 - 233
Target Start/End: Complemental strand, 1804 - 1756
Alignment:
Q  185 ccctgtttcgtgttcttgcgtcttttacacacgtttctgttttgaattg 233  Q
    ||||||||  ||||||||| |||||| ||||||||||||||||||||||    
T  1804 ccctgttttatgttcttgcatctttttcacacgtttctgttttgaattg 1756  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0334; HSP #2
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 186 - 235
Target Start/End: Complemental strand, 234 - 185
Alignment:
Q  186 cctgtttcgtgttcttgcgtcttttacacacgtttctgttttgaattggc 235  Q
    |||||||| |||||| | ||||||| || |||||||||||||||||||||    
T  234 cctgtttcatgttctggagtctttttcaaacgtttctgttttgaattggc 185  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0266 (Bit Score: 33; Significance: 0.000000001; HSPs: 1)
Name: scaffold0266
Description:

Target: scaffold0266; HSP #1
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 190 - 234
Target Start/End: Complemental strand, 873 - 829
Alignment:
Q  190 tttcgtgttcttgcgtcttttacacacgtttctgttttgaattgg 234  Q
    ||||| ||||||| ||||||| |||||||||||||||||||||||    
T  873 tttcgcgttcttgtgtctttttcacacgtttctgttttgaattgg 829  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0083 (Bit Score: 33; Significance: 0.000000001; HSPs: 1)
Name: scaffold0083
Description:

Target: scaffold0083; HSP #1
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 185 - 233
Target Start/End: Complemental strand, 1654 - 1606
Alignment:
Q  185 ccctgtttcgtgttcttgcgtcttttacacacgtttctgttttgaattg 233  Q
    |||||||| | ||||||||||||||| ||||||| ||||||||||||||    
T  1654 ccctgttttgcgttcttgcgtctttttcacacgtctctgttttgaattg 1606  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0639 (Bit Score: 32; Significance: 0.000000005; HSPs: 1)
Name: scaffold0639
Description:

Target: scaffold0639; HSP #1
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 188 - 235
Target Start/End: Original strand, 6924 - 6971
Alignment:
Q  188 tgtttcgtgttcttgcgtcttttacacacgtttctgttttgaattggc 235  Q
    |||||| ||||||||| | |||| ||||||||||||||||||||||||    
T  6924 tgtttcatgttcttgcatttttttcacacgtttctgttttgaattggc 6971  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0454 (Bit Score: 32; Significance: 0.000000005; HSPs: 1)
Name: scaffold0454
Description:

Target: scaffold0454; HSP #1
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 187 - 230
Target Start/End: Complemental strand, 233 - 190
Alignment:
Q  187 ctgtttcgtgttcttgcgtcttttacacacgtttctgttttgaa 230  Q
    ||||||| |||||||||||||||| |||||||||| ||||||||    
T  233 ctgtttcatgttcttgcgtctttttcacacgtttccgttttgaa 190  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0254 (Bit Score: 32; Significance: 0.000000005; HSPs: 1)
Name: scaffold0254
Description:

Target: scaffold0254; HSP #1
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 187 - 230
Target Start/End: Complemental strand, 21405 - 21362
Alignment:
Q  187 ctgtttcgtgttcttgcgtcttttacacacgtttctgttttgaa 230  Q
    ||||||| |||||||||||||||| |||||||||| ||||||||    
T  21405 ctgtttcatgttcttgcgtctttttcacacgtttccgttttgaa 21362  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0232 (Bit Score: 32; Significance: 0.000000005; HSPs: 1)
Name: scaffold0232
Description:

Target: scaffold0232; HSP #1
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 186 - 229
Target Start/End: Complemental strand, 3988 - 3945
Alignment:
Q  186 cctgtttcgtgttcttgcgtcttttacacacgtttctgttttga 229  Q
    |||||||| |||||||| ||||||| ||||||||||||||||||    
T  3988 cctgtttcatgttcttgagtctttttcacacgtttctgttttga 3945  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0230 (Bit Score: 32; Significance: 0.000000005; HSPs: 1)
Name: scaffold0230
Description:

Target: scaffold0230; HSP #1
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 187 - 230
Target Start/End: Complemental strand, 14604 - 14561
Alignment:
Q  187 ctgtttcgtgttcttgcgtcttttacacacgtttctgttttgaa 230  Q
    ||||||| |||||||||||||||| |||||||||| ||||||||    
T  14604 ctgtttcatgttcttgcgtctttttcacacgtttccgttttgaa 14561  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0695 (Bit Score: 31; Significance: 0.00000002; HSPs: 1)
Name: scaffold0695
Description:

Target: scaffold0695; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 186 - 232
Target Start/End: Complemental strand, 6604 - 6558
Alignment:
Q  186 cctgtttcgtgttcttgcgtcttttacacacgtttctgttttgaatt 232  Q
    |||||||| ||||||||| |||||| || ||||||||||||||||||    
T  6604 cctgtttcatgttcttgcatctttttcatacgtttctgttttgaatt 6558  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0630 (Bit Score: 31; Significance: 0.00000002; HSPs: 1)
Name: scaffold0630
Description:

Target: scaffold0630; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 186 - 232
Target Start/End: Complemental strand, 8782 - 8736
Alignment:
Q  186 cctgtttcgtgttcttgcgtcttttacacacgtttctgttttgaatt 232  Q
    |||||||| ||||||||||| |||| |||||||||| ||||||||||    
T  8782 cctgtttcatgttcttgcgtatttttcacacgtttcggttttgaatt 8736  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0364 (Bit Score: 31; Significance: 0.00000002; HSPs: 1)
Name: scaffold0364
Description:

Target: scaffold0364; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 185 - 235
Target Start/End: Complemental strand, 7852 - 7802
Alignment:
Q  185 ccctgtttcgtgttcttgcgtcttttacacacgtttctgttttgaattggc 235  Q
    ||||||||  |||||||||||||||| ||||||||| |||| |||||||||    
T  7852 ccctgttttatgttcttgcgtctttttcacacgtttatgttatgaattggc 7802  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0337 (Bit Score: 31; Significance: 0.00000002; HSPs: 1)
Name: scaffold0337
Description:

Target: scaffold0337; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 190 - 232
Target Start/End: Original strand, 9294 - 9336
Alignment:
Q  190 tttcgtgttcttgcgtcttttacacacgtttctgttttgaatt 232  Q
    ||||||||||||| ||||||| ||||||| |||||||||||||    
T  9294 tttcgtgttcttgtgtctttttcacacgtctctgttttgaatt 9336  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0104 (Bit Score: 31; Significance: 0.00000002; HSPs: 2)
Name: scaffold0104
Description:

Target: scaffold0104; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 185 - 235
Target Start/End: Complemental strand, 7938 - 7888
Alignment:
Q  185 ccctgtttcgtgttcttgcgtcttttacacacgtttctgttttgaattggc 235  Q
    ||||||||| || |||||| |||||| |||| |||||||||||||||||||    
T  7938 ccctgtttcatgatcttgcatctttttcacatgtttctgttttgaattggc 7888  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0104; HSP #2
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 185 - 235
Target Start/End: Complemental strand, 14569 - 14519
Alignment:
Q  185 ccctgtttcgtgttcttgcgtcttttacacacgtttctgttttgaattggc 235  Q
    ||||||||| || |||||| |||||| |||| |||||||||||||||||||    
T  14569 ccctgtttcatgatcttgcatctttttcacatgtttctgttttgaattggc 14519  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0057 (Bit Score: 31; Significance: 0.00000002; HSPs: 1)
Name: scaffold0057
Description:

Target: scaffold0057; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 185 - 235
Target Start/End: Original strand, 70161 - 70211
Alignment:
Q  185 ccctgtttcgtgttcttgcgtcttttacacacgtttctgttttgaattggc 235  Q
    |||| |||| ||||||| ||| |||| ||||||||||||||||||||||||    
T  70161 ccctatttcatgttctttcgtattttgcacacgtttctgttttgaattggc 70211  T

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Target: scaffold0016 (Bit Score: 31; Significance: 0.00000002; HSPs: 1)
Name: scaffold0016
Description:

Target: scaffold0016; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 185 - 235
Target Start/End: Original strand, 174481 - 174531
Alignment:
Q  185 ccctgtttcgtgttcttgcgtcttttacacacgtttctgttttgaattggc 235  Q
    ||||||||  ||||||||| | |||| ||||||||||||||||||||||||    
T  174481 ccctgttttatgttcttgcatttttttcacacgtttctgttttgaattggc 174531  T

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Target: scaffold0439 (Bit Score: 30; Significance: 0.00000008; HSPs: 1)
Name: scaffold0439
Description:

Target: scaffold0439; HSP #1
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 186 - 235
Target Start/End: Complemental strand, 4138 - 4089
Alignment:
Q  186 cctgtttcgtgttcttgcgtcttttacacacgtttctgttttgaattggc 235  Q
    |||||||| | ||||||| |||||| |||||||||||||||||| |||||    
T  4138 cctgtttcatattcttgcatctttttcacacgtttctgttttgagttggc 4089  T

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Target: scaffold0100 (Bit Score: 30; Significance: 0.00000008; HSPs: 1)
Name: scaffold0100
Description:

Target: scaffold0100; HSP #1
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 185 - 234
Target Start/End: Original strand, 9808 - 9856
Alignment:
Q  185 ccctgtttcgtgttcttgcgtcttttacacacgtttctgttttgaattgg 234  Q
    |||||||||| |||||||| |||||| ||||| |||||||||||||||||    
T  9808 ccctgtttcgcgttcttgcatctttt-cacacatttctgttttgaattgg 9856  T

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Target: scaffold0070 (Bit Score: 30; Significance: 0.00000008; HSPs: 1)
Name: scaffold0070
Description:

Target: scaffold0070; HSP #1
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 185 - 226
Target Start/End: Complemental strand, 8776 - 8735
Alignment:
Q  185 ccctgtttcgtgttcttgcgtcttttacacacgtttctgttt 226  Q
    ||||||||| |||||||||||||||||||| |||||| ||||    
T  8776 ccctgtttcatgttcttgcgtcttttacacccgtttccgttt 8735  T

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Target: scaffold0063 (Bit Score: 30; Significance: 0.00000008; HSPs: 1)
Name: scaffold0063
Description:

Target: scaffold0063; HSP #1
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 186 - 235
Target Start/End: Complemental strand, 62435 - 62386
Alignment:
Q  186 cctgtttcgtgttcttgcgtcttttacacacgtttctgttttgaattggc 235  Q
    |||||||| |||| |||| |||| | ||||||||||||||||||||||||    
T  62435 cctgtttcatgtttttgcatcttcttcacacgtttctgttttgaattggc 62386  T

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Target: scaffold0061 (Bit Score: 30; Significance: 0.00000008; HSPs: 2)
Name: scaffold0061
Description:

Target: scaffold0061; HSP #1
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 186 - 235
Target Start/End: Original strand, 14920 - 14969
Alignment:
Q  186 cctgtttcgtgttcttgcgtcttttacacacgtttctgttttgaattggc 235  Q
    ||||||||  ||| ||||||||||| |||| |||||||||||||||||||    
T  14920 cctgtttcaggttattgcgtctttttcacatgtttctgttttgaattggc 14969  T

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Target: scaffold0061; HSP #2
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 186 - 235
Target Start/End: Original strand, 23978 - 24027
Alignment:
Q  186 cctgtttcgtgttcttgcgtcttttacacacgtttctgttttgaattggc 235  Q
    ||||||||  ||| ||||||||||| |||| |||||||||||||||||||    
T  23978 cctgtttcaggttattgcgtctttttcacatgtttctgttttgaattggc 24027  T

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Target: scaffold0021 (Bit Score: 30; Significance: 0.00000008; HSPs: 1)
Name: scaffold0021
Description:

Target: scaffold0021; HSP #1
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 190 - 235
Target Start/End: Complemental strand, 169152 - 169107
Alignment:
Q  190 tttcgtgttcttgcgtcttttacacacgtttctgttttgaattggc 235  Q
    |||| ||||||||| |||||| |||||||||||||||||| |||||    
T  169152 tttcatgttcttgcatctttttcacacgtttctgttttgagttggc 169107  T

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Target: scaffold0017 (Bit Score: 30; Significance: 0.00000008; HSPs: 1)
Name: scaffold0017
Description:

Target: scaffold0017; HSP #1
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 155 - 216
Target Start/End: Complemental strand, 23114 - 23053
Alignment:
Q  155 tcgccttgcgaaatgttcagtggcagactgccctgtttcgtgttcttgcgtcttttacacac 216  Q
    |||||| | ||| ||||| ||||||| |||||||||||||||||||||| ||| || |||||    
T  23114 tcgcctcgtgaattgttcggtggcagcctgccctgtttcgtgttcttgcatctgtttcacac 23053  T

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Target: scaffold0632 (Bit Score: 29; Significance: 0.0000003; HSPs: 1)
Name: scaffold0632
Description:

Target: scaffold0632; HSP #1
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 183 - 235
Target Start/End: Complemental strand, 886 - 834
Alignment:
Q  183 tgccctgtttcgtgttcttgcgtcttttacacacgtttctgttttgaattggc 235  Q
    |||| |||||| |||||||||||||||| ||| ||||| ||||| ||||||||    
T  886 tgccttgtttcatgttcttgcgtctttttcacccgtttttgtttcgaattggc 834  T

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Target: scaffold0394 (Bit Score: 29; Significance: 0.0000003; HSPs: 1)
Name: scaffold0394
Description:

Target: scaffold0394; HSP #1
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 185 - 229
Target Start/End: Original strand, 7885 - 7929
Alignment:
Q  185 ccctgtttcgtgttcttgcgtcttttacacacgtttctgttttga 229  Q
    |||||||| | ||||||||||||||| ||||| ||||||||||||    
T  7885 ccctgttttgcgttcttgcgtctttttcacacatttctgttttga 7929  T

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Target: scaffold0379 (Bit Score: 29; Significance: 0.0000003; HSPs: 1)
Name: scaffold0379
Description:

Target: scaffold0379; HSP #1
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 185 - 233
Target Start/End: Complemental strand, 10419 - 10371
Alignment:
Q  185 ccctgtttcgtgttcttgcgtcttttacacacgtttctgttttgaattg 233  Q
    ||||||||| ||||||||| ||| || ||||| ||||||||||||||||    
T  10419 ccctgtttcatgttcttgcatctgtttcacacttttctgttttgaattg 10371  T

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Target: scaffold0220 (Bit Score: 29; Significance: 0.0000003; HSPs: 1)
Name: scaffold0220
Description:

Target: scaffold0220; HSP #1
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 191 - 235
Target Start/End: Complemental strand, 13659 - 13615
Alignment:
Q  191 ttcgtgttcttgcgtcttttacacacgtttctgttttgaattggc 235  Q
    |||| ||||||||||||||| || |||||||| ||||||||||||    
T  13659 ttcgcgttcttgcgtctttttcagacgtttctattttgaattggc 13615  T

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Target: scaffold0165 (Bit Score: 29; Significance: 0.0000003; HSPs: 1)
Name: scaffold0165
Description:

Target: scaffold0165; HSP #1
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 185 - 229
Target Start/End: Complemental strand, 31620 - 31576
Alignment:
Q  185 ccctgtttcgtgttcttgcgtcttttacacacgtttctgttttga 229  Q
    |||||||||||||||||| ||||||  ||||| ||||||||||||    
T  31620 ccctgtttcgtgttcttgtgtctttctcacacatttctgttttga 31576  T

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Target: scaffold0151 (Bit Score: 29; Significance: 0.0000003; HSPs: 1)
Name: scaffold0151
Description:

Target: scaffold0151; HSP #1
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 186 - 234
Target Start/End: Complemental strand, 9773 - 9725
Alignment:
Q  186 cctgtttcgtgttcttgcgtcttttacacacgtttctgttttgaattgg 234  Q
    |||||||  |||||||||||| ||| |||| ||||||||||||||||||    
T  9773 cctgttttatgttcttgcgtcattttcacatgtttctgttttgaattgg 9725  T

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Target: scaffold0146 (Bit Score: 29; Significance: 0.0000003; HSPs: 1)
Name: scaffold0146
Description:

Target: scaffold0146; HSP #1
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 188 - 232
Target Start/End: Complemental strand, 22744 - 22700
Alignment:
Q  188 tgtttcgtgttcttgcgtcttttacacacgtttctgttttgaatt 232  Q
    |||||| |||||||||||||||| ||||||||| ||||| |||||    
T  22744 tgtttcatgttcttgcgtctttttcacacgtttgtgtttggaatt 22700  T

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Target: scaffold0096 (Bit Score: 29; Significance: 0.0000003; HSPs: 1)
Name: scaffold0096
Description:

Target: scaffold0096; HSP #1
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 187 - 235
Target Start/End: Complemental strand, 21785 - 21737
Alignment:
Q  187 ctgtttcgtgttcttgcgtcttttacacacgtttctgttttgaattggc 235  Q
    ||||||| | |||||||||||| | ||||| ||||||||||||||||||    
T  21785 ctgtttcatcttcttgcgtcttgttcacacatttctgttttgaattggc 21737  T

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Target: scaffold0086 (Bit Score: 29; Significance: 0.0000003; HSPs: 1)
Name: scaffold0086
Description:

Target: scaffold0086; HSP #1
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 195 - 235
Target Start/End: Original strand, 35860 - 35900
Alignment:
Q  195 tgttcttgcgtcttttacacacgtttctgttttgaattggc 235  Q
    |||||||| |||||||  |||||||||||||||||||||||    
T  35860 tgttcttgtgtcttttttacacgtttctgttttgaattggc 35900  T

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Target: scaffold0019 (Bit Score: 29; Significance: 0.0000003; HSPs: 2)
Name: scaffold0019
Description:

Target: scaffold0019; HSP #1
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 190 - 234
Target Start/End: Complemental strand, 33952 - 33908
Alignment:
Q  190 tttcgtgttcttgcgtcttttacacacgtttctgttttgaattgg 234  Q
    ||||| ||||||| ||||||  |||||||||||||||||||||||    
T  33952 tttcgcgttcttgtgtctttatcacacgtttctgttttgaattgg 33908  T

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Target: scaffold0019; HSP #2
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 190 - 234
Target Start/End: Original strand, 133502 - 133546
Alignment:
Q  190 tttcgtgttcttgcgtcttttacacacgtttctgttttgaattgg 234  Q
    ||||| ||||||| ||||||| ||||||||| |||||||||||||    
T  133502 tttcgcgttcttgtgtctttttcacacgtttatgttttgaattgg 133546  T

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