View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF10179_high_39 (Length: 238)

Name: NF10179_high_39
Description: NF10179
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF10179_high_39
NF10179_high_39
[»] chr6 (18 HSPs)
chr6 (26-223)||(6770826-6771024)
chr6 (26-179)||(32800197-32800351)
chr6 (66-145)||(2398041-2398120)
chr6 (66-158)||(28048729-28048821)
chr6 (92-169)||(2839058-2839135)
chr6 (75-148)||(20208011-20208084)
chr6 (75-148)||(22102034-22102107)
chr6 (25-98)||(27082303-27082376)
chr6 (30-182)||(10008190-10008341)
chr6 (33-178)||(227333-227480)
chr6 (31-146)||(5611129-5611244)
chr6 (66-155)||(23131433-23131522)
chr6 (58-122)||(18493268-18493332)
chr6 (30-157)||(9213033-9213160)
chr6 (179-223)||(6764746-6764790)
chr6 (73-177)||(17453942-17454046)
chr6 (28-177)||(17834945-17835094)
chr6 (25-92)||(31223187-31223255)
[»] scaffold0299 (1 HSPs)
scaffold0299 (26-204)||(17959-18137)
[»] chr2 (31 HSPs)
chr2 (27-178)||(1870462-1870612)
chr2 (31-148)||(13835835-13835951)
chr2 (66-181)||(5444457-5444572)
chr2 (25-178)||(40574111-40574264)
chr2 (32-145)||(34501595-34501707)
chr2 (58-179)||(1004742-1004862)
chr2 (66-179)||(33635546-33635658)
chr2 (31-148)||(13738393-13738510)
chr2 (78-148)||(29525652-29525722)
chr2 (35-151)||(18717852-18717968)
chr2 (100-178)||(8793876-8793954)
chr2 (30-151)||(38193674-38193796)
chr2 (58-176)||(40346733-40346851)
chr2 (30-151)||(4978747-4978868)
chr2 (105-178)||(36087415-36087488)
chr2 (36-139)||(6462598-6462701)
chr2 (67-122)||(37851286-37851341)
chr2 (28-131)||(43131774-43131877)
chr2 (58-148)||(3201136-3201226)
chr2 (30-136)||(4996670-4996776)
chr2 (29-146)||(23453340-23453458)
chr2 (67-148)||(30905376-30905457)
chr2 (56-136)||(23788416-23788496)
chr2 (28-96)||(41436320-41436388)
chr2 (29-96)||(6315883-6315950)
chr2 (65-180)||(9021505-9021620)
chr2 (28-131)||(27896458-27896561)
chr2 (31-80)||(43080371-43080420)
chr2 (33-169)||(13717178-13717313)
chr2 (56-168)||(34334893-34335005)
chr2 (115-147)||(35710770-35710802)
[»] chr4 (47 HSPs)
chr4 (26-179)||(2908178-2908330)
chr4 (58-183)||(51099989-51100114)
chr4 (31-155)||(55090779-55090902)
chr4 (28-153)||(16831094-16831218)
chr4 (29-178)||(53142777-53142926)
chr4 (67-148)||(45921337-45921418)
chr4 (75-148)||(28299288-28299361)
chr4 (26-139)||(5645654-5645766)
chr4 (34-167)||(9119242-9119375)
chr4 (25-159)||(27284064-27284198)
chr4 (31-176)||(48524493-48524636)
chr4 (26-177)||(34236173-34236324)
chr4 (77-157)||(40298015-40298095)
chr4 (58-148)||(4860143-4860232)
chr4 (58-148)||(14347121-14347209)
chr4 (66-139)||(32325057-32325130)
chr4 (27-178)||(41142262-41142413)
chr4 (58-179)||(12094983-12095104)
chr4 (25-157)||(52837253-52837388)
chr4 (30-153)||(37461760-37461881)
chr4 (30-148)||(20775069-20775187)
chr4 (99-177)||(53145195-53145273)
chr4 (31-136)||(50101290-50101395)
chr4 (77-148)||(21762103-21762172)
chr4 (58-145)||(2565412-2565499)
chr4 (25-175)||(48419065-48419215)
chr4 (56-148)||(31241949-31242042)
chr4 (75-148)||(32651924-32651996)
chr4 (58-158)||(31089773-31089872)
chr4 (67-122)||(18093682-18093737)
chr4 (100-179)||(19480703-19480782)
chr4 (25-145)||(30694278-30694395)
chr4 (82-136)||(37992901-37992955)
chr4 (90-151)||(32543977-32544037)
chr4 (75-148)||(32653850-32653922)
chr4 (66-179)||(42595151-42595264)
chr4 (36-128)||(19248892-19248983)
chr4 (27-154)||(48202479-48202607)
chr4 (75-139)||(48400920-48400984)
chr4 (127-178)||(20435932-20435983)
chr4 (137-180)||(51018499-51018542)
chr4 (30-148)||(16341100-16341218)
chr4 (65-151)||(21755907-21755993)
chr4 (112-169)||(28668396-28668454)
chr4 (30-84)||(35808568-35808621)
chr4 (143-181)||(38675919-38675957)
chr4 (66-170)||(31861404-31861508)
[»] chr7 (37 HSPs)
chr7 (26-178)||(24937825-24937976)
chr7 (30-183)||(8656291-8656446)
chr7 (33-177)||(37532523-37532668)
chr7 (28-181)||(39786418-39786570)
chr7 (30-144)||(47537423-47537536)
chr7 (25-181)||(19676987-19677143)
chr7 (25-148)||(37928292-37928415)
chr7 (67-170)||(39386939-39387042)
chr7 (66-159)||(1112139-1112232)
chr7 (25-129)||(16979934-16980038)
chr7 (31-176)||(31487680-31487825)
chr7 (27-154)||(47445348-47445475)
chr7 (58-188)||(8746161-8746290)
chr7 (28-148)||(1309722-1309842)
chr7 (25-167)||(41064280-41064426)
chr7 (58-146)||(8117444-8117532)
chr7 (33-145)||(11740362-11740474)
chr7 (67-183)||(21515053-21515169)
chr7 (67-135)||(21857611-21857679)
chr7 (75-134)||(22555747-22555806)
chr7 (46-151)||(18037845-18037950)
chr7 (78-139)||(25780245-25780306)
chr7 (58-158)||(18220974-18221074)
chr7 (108-176)||(18756938-18757006)
chr7 (89-145)||(27915195-27915251)
chr7 (30-154)||(41760331-41760455)
chr7 (74-117)||(4036094-4036137)
chr7 (26-129)||(7833761-7833864)
chr7 (31-118)||(33194720-33194807)
chr7 (106-148)||(28664545-28664587)
chr7 (58-135)||(40721412-40721489)
chr7 (31-158)||(16685729-16685858)
chr7 (31-158)||(17659965-17660094)
chr7 (58-147)||(45907033-45907122)
chr7 (65-181)||(1359707-1359823)
chr7 (105-157)||(34993087-34993139)
chr7 (66-98)||(34993176-34993208)
[»] chr5 (36 HSPs)
chr5 (28-179)||(6102824-6102974)
chr5 (26-140)||(16802021-16802134)
chr5 (75-180)||(12036274-12036379)
chr5 (30-169)||(3600108-3600246)
chr5 (28-148)||(6830263-6830383)
chr5 (31-148)||(15139168-15139281)
chr5 (29-155)||(29552322-29552447)
chr5 (26-139)||(39034458-39034571)
chr5 (25-170)||(14152448-14152593)
chr5 (58-170)||(11815936-11816048)
chr5 (25-180)||(22293976-22294130)
chr5 (78-145)||(2033499-2033566)
chr5 (28-150)||(30840594-30840715)
chr5 (25-144)||(27544581-27544700)
chr5 (31-116)||(28511179-28511265)
chr5 (27-155)||(2611139-2611267)
chr5 (77-158)||(9114930-9115011)
chr5 (105-178)||(34346954-34347027)
chr5 (63-123)||(5002917-5002977)
chr5 (122-186)||(5471314-5471378)
chr5 (92-155)||(33085336-33085399)
chr5 (74-145)||(35290678-35290749)
chr5 (58-169)||(8151772-8151885)
chr5 (66-175)||(20526977-20527087)
chr5 (58-148)||(36482076-36482166)
chr5 (58-126)||(5471104-5471171)
chr5 (30-182)||(14863334-14863485)
chr5 (65-148)||(4350891-4350973)
chr5 (92-179)||(35626647-35626734)
chr5 (108-178)||(7736376-7736446)
chr5 (99-145)||(35349395-35349441)
chr5 (92-153)||(12487097-12487158)
chr5 (138-187)||(25017412-25017461)
chr5 (58-98)||(14044728-14044768)
chr5 (66-170)||(30293799-30293903)
chr5 (91-135)||(39059712-39059756)
[»] chr1 (33 HSPs)
chr1 (57-178)||(31160751-31160871)
chr1 (33-170)||(8001723-8001860)
chr1 (66-178)||(27531-27643)
chr1 (30-170)||(34382609-34382748)
chr1 (31-177)||(13969068-13969214)
chr1 (25-179)||(46295838-46295992)
chr1 (77-169)||(11065844-11065936)
chr1 (58-154)||(39283695-39283791)
chr1 (66-149)||(27908952-27909034)
chr1 (26-178)||(26829485-26829637)
chr1 (66-130)||(28490665-28490729)
chr1 (58-178)||(35876774-35876894)
chr1 (66-146)||(48375274-48375354)
chr1 (74-142)||(41936182-41936254)
chr1 (25-145)||(32187046-32187165)
chr1 (27-98)||(38597474-38597545)
chr1 (30-87)||(3529108-3529165)
chr1 (105-150)||(3529443-3529488)
chr1 (88-129)||(13680651-13680692)
chr1 (25-98)||(34347558-34347631)
chr1 (29-129)||(48502562-48502662)
chr1 (66-144)||(10226464-10226542)
chr1 (28-146)||(31884460-31884577)
chr1 (18-148)||(33148129-33148259)
chr1 (105-155)||(38169125-38169175)
chr1 (66-131)||(1669915-1669980)
chr1 (93-146)||(2193268-2193321)
chr1 (25-118)||(8279728-8279821)
chr1 (74-111)||(27160335-27160372)
chr1 (105-150)||(47496888-47496933)
chr1 (79-136)||(52762312-52762369)
chr1 (27-151)||(5069697-5069821)
chr1 (127-183)||(44359779-44359835)
[»] chr3 (31 HSPs)
chr3 (31-186)||(28709526-28709681)
chr3 (31-168)||(34228236-34228372)
chr3 (25-181)||(635670-635826)
chr3 (25-158)||(48338805-48338938)
chr3 (35-158)||(41287871-41287992)
chr3 (66-148)||(48252269-48252351)
chr3 (31-148)||(4020096-4020213)
chr3 (65-181)||(6785759-6785875)
chr3 (82-157)||(19202174-19202249)
chr3 (27-181)||(44291196-44291348)
chr3 (58-148)||(44698243-44698333)
chr3 (33-139)||(2127360-2127461)
chr3 (36-181)||(12109653-12109797)
chr3 (29-129)||(26835714-26835814)
chr3 (74-137)||(23877727-23877790)
chr3 (31-113)||(4490779-4490860)
chr3 (33-179)||(49261780-49261926)
chr3 (114-179)||(12373069-12373134)
chr3 (25-126)||(54801350-54801451)
chr3 (56-182)||(17109499-17109625)
chr3 (25-116)||(25319455-25319546)
chr3 (100-139)||(31472062-31472101)
chr3 (59-153)||(29458060-29458154)
chr3 (46-136)||(47334873-47334963)
chr3 (25-170)||(1711900-1712045)
chr3 (29-154)||(15671109-15671233)
chr3 (58-151)||(29032437-29032530)
chr3 (75-116)||(42788358-42788399)
chr3 (59-112)||(49419086-49419139)
chr3 (25-153)||(11676729-11676857)
chr3 (26-82)||(19202398-19202453)
[»] chr8 (34 HSPs)
chr8 (29-181)||(18131188-18131339)
chr8 (67-170)||(40607332-40607435)
chr8 (25-170)||(44648914-44649059)
chr8 (26-178)||(10451891-10452044)
chr8 (25-179)||(20542379-20542533)
chr8 (66-148)||(27283324-27283405)
chr8 (30-180)||(3137397-3137547)
chr8 (58-176)||(4989721-4989838)
chr8 (24-148)||(35901414-35901538)
chr8 (75-148)||(15869009-15869082)
chr8 (64-183)||(37561462-37561581)
chr8 (31-98)||(43917585-43917652)
chr8 (30-148)||(10029159-10029277)
chr8 (25-179)||(11150915-11151068)
chr8 (28-179)||(1342317-1342467)
chr8 (105-187)||(10652489-10652571)
chr8 (28-103)||(30924209-30924283)
chr8 (28-135)||(34678218-34678324)
chr8 (65-183)||(2768524-2768642)
chr8 (33-98)||(27506994-27507059)
chr8 (25-154)||(29795498-29795626)
chr8 (32-129)||(34832274-34832371)
chr8 (81-145)||(12958923-12958987)
chr8 (25-150)||(17720174-17720301)
chr8 (25-177)||(40489842-40489993)
chr8 (74-133)||(12987654-12987713)
chr8 (58-136)||(44947372-44947449)
chr8 (67-148)||(3347509-3347590)
chr8 (59-148)||(18200679-18200768)
chr8 (30-79)||(27162832-27162881)
chr8 (77-134)||(34085218-34085275)
chr8 (58-118)||(20821915-20821975)
chr8 (26-98)||(23725673-23725745)
chr8 (25-133)||(23797506-23797614)
[»] scaffold0017 (1 HSPs)
scaffold0017 (31-148)||(31466-31583)
[»] scaffold0039 (1 HSPs)
scaffold0039 (28-145)||(29988-30105)
[»] scaffold0011 (1 HSPs)
scaffold0011 (77-148)||(12923-12994)
[»] scaffold0123 (1 HSPs)
scaffold0123 (28-146)||(17529-17647)
[»] scaffold0886 (1 HSPs)
scaffold0886 (59-135)||(1116-1192)
[»] scaffold0204 (1 HSPs)
scaffold0204 (105-180)||(15332-15407)
[»] scaffold0283 (1 HSPs)
scaffold0283 (58-136)||(3350-3428)
[»] scaffold0079 (1 HSPs)
scaffold0079 (30-148)||(51643-51761)
[»] scaffold0036 (1 HSPs)
scaffold0036 (59-116)||(36558-36615)


Alignment Details
Target: chr6 (Bit Score: 163; Significance: 3e-87; HSPs: 18)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 163; E-Value: 3e-87
Query Start/End: Original strand, 26 - 223
Target Start/End: Original strand, 6770826 - 6771024
Alignment:
Q  26 agggcattggttaagcaaccaaaacaattcaatttttataaaaaa-gttgtgtaattattatttaatcaaaagtcaaaatttatattttcaagataaatt 124  Q
    ||||||||||||||||||||||||||| ||| ||||||||||||| ||| ||||||||||||||||||||||||||||||||||||||||||||||||||    
T  6770826 agggcattggttaagcaaccaaaacaagtcactttttataaaaaaagttatgtaattattatttaatcaaaagtcaaaatttatattttcaagataaatt 6770925  T
Q  125 ttctatttatagtttccttaaccaatgccctgagagcactggttagtaagacccttaaataaaacaaaaatgttgatcatactttataggagtacatat 223  Q
    ||||||||||||||||||||||||||||||| || ||||||||||| |||||||||||||||||||||| |||||||||||||||||||||||||||||    
T  6770926 ttctatttatagtttccttaaccaatgccctaagggcactggttagcaagacccttaaataaaacaaaagtgttgatcatactttataggagtacatat 6771024  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 26 - 179
Target Start/End: Original strand, 32800197 - 32800351
Alignment:
Q  26 agggcattggttaagcaaccaaaacaattcaatttttataaaaaagttg-tgtaattattatttaatcaaaagtcaaaatttatattttcaagataaatt 124  Q
    |||||||| |||||||||||||||  | | | |||||||||||||  || |||||||||||||||||||||| |||||| ||||||||| |||| |||||    
T  32800197 agggcatttgttaagcaaccaaaagtagtaattttttataaaaaaaatggtgtaattattatttaatcaaaaatcaaaacttatatttttaagacaaatt 32800296  T
Q  125 ttctatttatagtttccttaaccaatgccctgagagcactggttagtaagaccct 179  Q
    |||||||||||||||||||||||| || | |||| ||||| ||||  ||||||||    
T  32800297 ttctatttatagtttccttaaccattgtcatgagggcacttgttaacaagaccct 32800351  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 66 - 145
Target Start/End: Original strand, 2398041 - 2398120
Alignment:
Q  66 aaaaagttgtgtaattattatttaatcaaaagtcaaaatttatattttcaagataaattttctatttatagtttccttaa 145  Q
    |||||||  ||||||||||| ||||||||||||||||| |||||||||||||||||||||||||||||||| ||||||||    
T  2398041 aaaaagtgatgtaattattacttaatcaaaagtcaaaacttatattttcaagataaattttctatttatagattccttaa 2398120  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 66 - 158
Target Start/End: Complemental strand, 28048821 - 28048729
Alignment:
Q  66 aaaaagttgtgtaattattatttaatcaaaagtcaaaatttatattttcaagataaattttctatttatagtttccttaaccaatgccctgag 158  Q
    ||||||| |||||||||||| ||||| ||||||||||| ||||||||| || | |||||||||||||||| |||||||||| | |||||||||    
T  28048821 aaaaagtggtgtaattattacttaattaaaagtcaaaacttatatttttaaaacaaattttctatttataatttccttaactattgccctgag 28048729  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 92 - 169
Target Start/End: Original strand, 2839058 - 2839135
Alignment:
Q  92 caaaagtcaaaatttatattttcaagataaattttctatttatagtttccttaaccaatgccctgagagcactggtta 169  Q
    ||||||| ||||||||||||||||||| ||| |||||| | || | |||||||||||||| ||| |||||||||||||    
T  2839058 caaaagtaaaaatttatattttcaagacaaagtttctactaatggattccttaaccaatgtccttagagcactggtta 2839135  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 75 - 148
Target Start/End: Complemental strand, 20208084 - 20208011
Alignment:
Q  75 tgtaattattatttaatcaaaagtcaaaatttatattttcaagataaattttctatttatagtttccttaacca 148  Q
    ||||||||||| ||||||||||||||| | |||||||||||| | ||||||| ||||||||| ||| |||||||    
T  20208084 tgtaattattacttaatcaaaagtcaatacttatattttcaaaacaaattttatatttatagattcgttaacca 20208011  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 75 - 148
Target Start/End: Complemental strand, 22102107 - 22102034
Alignment:
Q  75 tgtaattattatttaatcaaaagtcaaaatttatattttcaagataaattttctatttatagtttccttaacca 148  Q
    ||||||||||| ||||||||||||||| | |||||||||||| | ||||||| ||||||||| ||| |||||||    
T  22102107 tgtaattattacttaatcaaaagtcaatacttatattttcaaaacaaattttatatttatagattcgttaacca 22102034  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 25 - 98
Target Start/End: Original strand, 27082303 - 27082376
Alignment:
Q  25 aagggcattggttaagcaaccaaaacaattcaatttttataaaaaagttgtgtaattattatttaatcaaaagt 98  Q
    |||| |||||||||| |||||||||||| | |||||| || ||||||||||||||| ||||||| |||||||||    
T  27082303 aaggacattggttaaacaaccaaaacaagtaaattttcatgaaaaagttgtgtaatgattatttgatcaaaagt 27082376  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 30 - 182
Target Start/End: Original strand, 10008190 - 10008341
Alignment:
Q  30 cattggttaagcaaccaaaacaattcaatttttataaaaaagttgtgtaattattatttaatcaaaagtcaaaatttatattttcaagataaattttcta 129  Q
    |||||||||||||||||||| || | | ||||||| ||||||| |||||||||||| || ||||||||| |   |||||||||| |||| ||| |||||     
T  10008190 cattggttaagcaaccaaaagaagtaagtttttattaaaaagtggtgtaattattacttgatcaaaagtaaccgtttatatttttaagacaaaatttct- 10008288  T
Q  130 tttatagtttccttaaccaatgccctgagagcactggttagtaagacccttaa 182  Q
    ||| ||| |||||||| || ||  |  ||  |||||||||| |||||||||||    
T  10008289 tttttagattccttaatcagtgttcaaaggacactggttagcaagacccttaa 10008341  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 33 - 178
Target Start/End: Original strand, 227333 - 227480
Alignment:
Q  33 tggttaagcaaccaaaacaattcaatttttat-aaaaaagttgtgtaattattattta-atcaaaagtcaaaatttatattttcaagataaattttctat 130  Q
    |||||||||| |||||| || | |  |||||| |||||| ||||||||| ||| |||  ||||||||| | |  |||||||||||| | ||| |||||||    
T  227333 tggttaagcatccaaaagaagtaagattttatgaaaaaaattgtgtaatcattgtttttatcaaaagtaacatcttatattttcaaaaaaaaatttctat 227432  T
Q  131 ttatagtttccttaaccaatgccctgagagcactggttagtaagaccc 178  Q
    |||||| ||||||||||| |||||| ||  |||||||||| |||||||    
T  227433 ttatagattccttaaccattgccctaaggacactggttagcaagaccc 227480  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 31 - 146
Target Start/End: Complemental strand, 5611244 - 5611129
Alignment:
Q  31 attggttaagcaaccaaaacaattcaatttttataaaaaagttgtgtaattattatttaatcaaaagtcaaaatttatattttcaagataaattttctat 130  Q
    ||||||||| || ||||||||| | | ||||||| || ||||||| |||||||||||| || |||||| | |  ||||||||  |||| ||| |||||||    
T  5611244 attggttaaacatccaaaacaagtaagtttttatgaataagttgtataattattatttgattaaaagtaacatcttatatttctaagacaaaatttctat 5611145  T
Q  131 ttatagtttccttaac 146  Q
    |||||| |||||||||    
T  5611144 ttatagattccttaac 5611129  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 66 - 155
Target Start/End: Complemental strand, 23131522 - 23131433
Alignment:
Q  66 aaaaagttgtgtaattattatttaatcaaaagtcaaaatttatattttcaagataaattttctatttatagtttccttaaccaatgccct 155  Q
    ||||||||| |||||||||  | || ||||||| ||||||||||||||||||| ||| |||||| | || | ||||||| ||||||||||    
T  23131522 aaaaagttgcgtaattattgctaaaacaaaagtaaaaatttatattttcaagacaaagtttctactaatggattccttatccaatgccct 23131433  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 58 - 122
Target Start/End: Original strand, 18493268 - 18493332
Alignment:
Q  58 tttttataaaaaagttgtgtaattattatttaatcaaaagtcaaaatttatattttcaagataaa 122  Q
    |||||||||||||||| |||||| |||| || ||||||||| | | |||||||||||||||||||    
T  18493268 tttttataaaaaagttttgtaataattacttgatcaaaagtaacattttatattttcaagataaa 18493332  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 30 - 157
Target Start/End: Complemental strand, 9213160 - 9213033
Alignment:
Q  30 cattggttaagcaaccaaaacaat---tcaatttttataaaaaagttgtgtaattattatttaatcaaaagtcaaaatttatattttcaagataaatttt 126  Q
    ||||||||||| |||||||||||    | | |||||||||||| || |||||||||||| || ||||||| |||||  |   |||||||||| |||||||    
T  9213160 cattggttaagaaaccaaaacaagcagtaactttttataaaaa-gtagtgtaattattacttgatcaaaaatcaaacat--aattttcaagacaaatttt 9213064  T
Q  127 ctatttatagtttccttaaccaatgccctga 157  Q
     |||||||||||| |||||||| | ||||||    
T  9213063 ttatttatagttttcttaaccatttccctga 9213033  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 179 - 223
Target Start/End: Original strand, 6764746 - 6764790
Alignment:
Q  179 ttaaataaaacaaaaatgttgatcatactttataggagtacatat 223  Q
    ||||||||||||||| |||||||| |||||||||||||| |||||    
T  6764746 ttaaataaaacaaaagtgttgatcgtactttataggagtgcatat 6764790  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 73 - 177
Target Start/End: Complemental strand, 17454046 - 17453942
Alignment:
Q  73 tgtgtaattattatttaatcaaaagtcaaaatttatattttcaagataaattttctatttatagtttccttaaccaatgccctgagagcactggttagta 172  Q
    |||||||||||||  | ||||||||| | |  |||||||||||| ||||| |||  |||||||   || ||||||||||||||||  ||||||||||| |    
T  17454046 tgtgtaattattacgtgatcaaaagtaacatcttatattttcaaaataaaattttcatttataaaatcgttaaccaatgccctgaaggcactggttagca 17453947  T
Q  173 agacc 177  Q
    |||||    
T  17453946 agacc 17453942  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 28 - 177
Target Start/End: Complemental strand, 17835094 - 17834945
Alignment:
Q  28 ggcattggttaagcaaccaaaacaattcaatttttataaaaaagttgtgtaattattatttaatcaaaagtcaaaatttatattttcaagataaattttc 127  Q
    |||||||||||| ||  ||||||||   | |||| || ||||| | || ||||||||| |||||||||||| | |  ||||||||  |||| ||  || |    
T  17835094 ggcattggttaaacattcaaaacaagcaagttttcatgaaaaaatcgtataattattacttaatcaaaagtaatatcttatatttcaaagacaatattgc 17834995  T
Q  128 tatttatagtttccttaaccaatgccctgagagcactggttagtaagacc 177  Q
    ||||| |||  |||||||||||||||| ||| | ||||||||| ||||||    
T  17834994 tatttgtagaatccttaaccaatgccccgagggtactggttagcaagacc 17834945  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 25 - 92
Target Start/End: Original strand, 31223187 - 31223255
Alignment:
Q  25 aagggcattggttaagcaaccaaaacaattcaatttttat-aaaaaagttgtgtaattattatttaatc 92  Q
    ||||||||||||||| || ||||||||| | | |||| || |||||||||||||||| |||| ||||||    
T  31223187 aagggcattggttaaacatccaaaacaagtaagttttcatgaaaaaagttgtgtaatcattacttaatc 31223255  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0299 (Bit Score: 112; Significance: 9e-57; HSPs: 1)
Name: scaffold0299
Description:

Target: scaffold0299; HSP #1
Raw Score: 112; E-Value: 9e-57
Query Start/End: Original strand, 26 - 204
Target Start/End: Complemental strand, 18137 - 17959
Alignment:
Q  26 agggcattggttaagcaaccaaaacaattcaatttttataaaaaa-gttgtgtaattattatttaatcaaaagtcaaaatttatattttcaagataaatt 124  Q
    ||||||||||||||||||||||||||| | | ||||||||||||| ||||||||||||||| ||||||||||||||||| ||||||||| ||||||||||    
T  18137 agggcattggttaagcaaccaaaacaagtaactttttataaaaaaagttgtgtaattattacttaatcaaaagtcaaaacttatatttttaagataaatt 18038  T
Q  125 ttctatttatagtttccttaaccaatgccctgagagcactggttagtaagacccttaaataaaacaaaaatgttgatcat 204  Q
    |||||||||||||||||||||||||||  ||||| ||||||  ||  |||||||||||||||||||||| ||||||||||    
T  18037 ttctatttatagtttccttaaccaatg-tctgagggcactgaataacaagacccttaaataaaacaaaagtgttgatcat 17959  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 96; Significance: 3e-47; HSPs: 31)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 96; E-Value: 3e-47
Query Start/End: Original strand, 27 - 178
Target Start/End: Complemental strand, 1870612 - 1870462
Alignment:
Q  27 gggcattggttaagcaaccaaaacaattcaatttttataaaaaagttgtgtaattattatttaatcaaaagtcaaaatttatattttcaagataaatttt 126  Q
    |||||||||||||||||| ||||||| | | ||||||||||||| | |||||||||||| ||||||||||||||||  |||||||||||||| |||||||    
T  1870612 gggcattggttaagcaacaaaaacaagtaactttttataaaaaaat-gtgtaattattacttaatcaaaagtcaaagcttatattttcaagacaaatttt 1870514  T
Q  127 ctatttatagtttccttaaccaatgccctgagagcactggttagtaagaccc 178  Q
    |||||||||||||||||||||| ||||||||| ||||||||||| |||||||    
T  1870513 ctatttatagtttccttaaccattgccctgagggcactggttagcaagaccc 1870462  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 62; E-Value: 6e-27
Query Start/End: Original strand, 31 - 148
Target Start/End: Original strand, 13835835 - 13835951
Alignment:
Q  31 attggttaagcaaccaaaacaattcaatttttataaaaaagttgtgtaattattatttaatcaaaagtcaaaatttatattttcaagataaattttctat 130  Q
    ||||||||||||| ||||| || | | ||||||||||||| | |||||||||||| ||||| ||||||||||| |||||||||||||| | |||||||||    
T  13835835 attggttaagcaagcaaaataaataattttttataaaaaa-tagtgtaattattacttaataaaaagtcaaaacttatattttcaagacagattttctat 13835933  T
Q  131 ttatagtttccttaacca 148  Q
    ||||||||| ||||||||    
T  13835934 ttatagttttcttaacca 13835951  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 66 - 181
Target Start/End: Complemental strand, 5444572 - 5444457
Alignment:
Q  66 aaaaagttgtgtaattattatttaatcaaaagtcaaaatttatattttcaagataaattttctatttatagtttccttaaccaatgccctgagagcactg 165  Q
    ||||||||||||| |||||| ||||| ||||||||||| |||||||||||||| ||| ||| ||||||||||||| |||| || |||||  ||| |||||    
T  5444572 aaaaagttgtgtatttattacttaattaaaagtcaaaacttatattttcaagacaaaatttttatttatagtttctttaatcattgccccaagaacactg 5444473  T
Q  166 gttagtaagaccctta 181  Q
    |||| |||||||||||    
T  5444472 gttaataagaccctta 5444457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 25 - 178
Target Start/End: Complemental strand, 40574264 - 40574111
Alignment:
Q  25 aagggcattggttaagcaaccaaaacaattcaatttttataaaaaagttgtgtaattattatttaatcaaaagtcaaaatttatattttcaagataaatt 124  Q
    ||||||| |||||||||| ||||||||| |  ||||| || |||||||||||||||||||| |  ||||||||| | | ||||||||| ||||| ||| |    
T  40574264 aagggcaatggttaagcatccaaaacaagtacattttcatgaaaaagttgtgtaattattactctatcaaaagttacattttatatttccaagacaaaat 40574165  T
Q  125 ttctatttatagtttccttaaccaatgccctgagagcactggttagtaagaccc 178  Q
    |||||||| ||| ||||||||||| |||||  || ||| ||||||| |||||||    
T  40574164 ttctatttgtagattccttaaccagtgccccaagggcaatggttagcaagaccc 40574111  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 32 - 145
Target Start/End: Complemental strand, 34501707 - 34501595
Alignment:
Q  32 ttggttaagcaaccaaaacaattcaatttttataaaaaagttgtgtaattattatttaatcaaaagtcaaaatttatattttcaagataaattttctatt 131  Q
    ||||||||||||||||| ||| | | ||||||||||||| |||||||||||||| ||||| |||| |||||| ||||||||| |||| || |||| ||||    
T  34501707 ttggttaagcaaccaaatcaaataactttttataaaaaa-ttgtgtaattattacttaataaaaaatcaaaaattatatttttaagacaacttttttatt 34501609  T
Q  132 tatagtttccttaa 145  Q
    ||||| ||||||||    
T  34501608 tatagattccttaa 34501595  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 58 - 179
Target Start/End: Complemental strand, 1004862 - 1004742
Alignment:
Q  58 tttttataaaaaagttgtgtaattattatttaatcaaaagtcaaaatttatattttcaagataaattttctatttatagtttccttaaccaatgccctga 157  Q
    ||||||| ||||||||||||||| || ||||| |||||||| | | ||||||||||||||| ||| ||||||||| ||| ||||||||||| | ||||||    
T  1004862 tttttatgaaaaagttgtgtaatcataattta-tcaaaagtaatattttatattttcaagacaaaatttctatttgtagattccttaaccattaccctga 1004764  T
Q  158 gagcactggttagtaagaccct 179  Q
    | | ||||||||| || |||||    
T  1004763 gggtactggttagcaaaaccct 1004742  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 66 - 179
Target Start/End: Original strand, 33635546 - 33635658
Alignment:
Q  66 aaaaagttgtgtaattattatttaatcaaaagtcaaaatttatattttcaagataaattttctatttatagtttccttaaccaatgccctgagagcactg 165  Q
    |||||||  ||||||||||| |||||||||||||||||||||||||||||||| |||||||  |||||||  |||| ||| || ||| ||||| |||| |    
T  33635546 aaaaagtgatgtaattattacttaatcaaaagtcaaaatttatattttcaagacaaatttttcatttataaattcc-taaacattgctctgagggcaccg 33635644  T
Q  166 gttagtaagaccct 179  Q
    ||||| ||||||||    
T  33635645 gttagcaagaccct 33635658  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 31 - 148
Target Start/End: Complemental strand, 13738510 - 13738393
Alignment:
Q  31 attggttaagcaaccaaaacaattcaatttttataaaaaagttgtgtaattattatttaatcaaaagtcaaaatttatattttcaagataaattttctat 130  Q
    |||||||||||| ||||||||| | | ||||||||||||| ||||||||| |||| || |||| |||| | |  |||||||||||| | ||| ||| |||    
T  13738510 attggttaagcatccaaaacaagtaagtttttataaaaaaattgtgtaatcattactttatcagaagtaacatcttatattttcaaaacaaaatttttat 13738411  T
Q  131 ttatagtttccttaacca 148  Q
    |||||| |||||||||||    
T  13738410 ttatagattccttaacca 13738393  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 78 - 148
Target Start/End: Original strand, 29525652 - 29525722
Alignment:
Q  78 aattattatttaatcaaaagtcaaaatttatattttcaagataaattttctatttatagtttccttaacca 148  Q
    |||||||| |||||||||||||||||||||||||||  ||||||| ||| ||||||||| || ||||||||    
T  29525652 aattattacttaatcaaaagtcaaaatttatatttttgagataaaatttttatttatagatttcttaacca 29525722  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 35 - 151
Target Start/End: Original strand, 18717852 - 18717968
Alignment:
Q  35 gttaagcaaccaaaacaattcaatttttataaaaaagttgtgtaattattatttaatcaaaagtcaaaatttatattttcaagataaattttctatttat 134  Q
    |||||||| |||||||||   |||||| || ||||||||||||||| |||| || ||||||||| | |  ||||||||| || ||||| ||||||||| |    
T  18717852 gttaagcatccaaaacaaacaaattttcatgaaaaagttgtgtaatcattacttgatcaaaagtaacatcttatatttttaaaataaaatttctatttgt 18717951  T
Q  135 agtttccttaaccaatg 151  Q
    |  ||||||||||||||    
T  18717952 aaattccttaaccaatg 18717968  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 100 - 178
Target Start/End: Original strand, 8793876 - 8793954
Alignment:
Q  100 aaaatttatattttcaagataaattttctatttatagtttccttaaccaatgccctgagagcactggttagtaagaccc 178  Q
    |||| |||||||| ||||| ||| ||||||||  ||| |||||||||||||||||| || ||||||||||| |||||||    
T  8793876 aaaacttatatttccaagacaaagtttctattagtagattccttaaccaatgcccttagggcactggttagcaagaccc 8793954  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 30 - 151
Target Start/End: Complemental strand, 38193796 - 38193674
Alignment:
Q  30 cattggttaagcaaccaaaacaattcaatttttat-aaaaaagttgtgtaattattatttaatcaaaagtcaaaatttatattttcaagataaattttct 128  Q
    ||||||||||||||  || ||| || | ||||||| |||||||| ||||||||||||||| ||||||| | |||| ||| ||||| || ||||| |||||    
T  38193796 cattggttaagcaattaatacagttaagtttttatgaaaaaagtagtgtaattattatttcatcaaaaataaaaacttacatttttaaaataaaatttct 38193697  T
Q  129 atttatagtttccttaaccaatg 151  Q
    ||| | || |||||||| |||||    
T  38193696 attaaaagattccttaatcaatg 38193674  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 58 - 176
Target Start/End: Original strand, 40346733 - 40346851
Alignment:
Q  58 tttttataaaaaagttgtgtaattattatttaatcaaaagtcaaaatttatattttcaagataaattttctatttatagtttccttaaccaatgccctga 157  Q
    ||||||| ||||||||||| ||| ||||||| ||||||| | | |  |||||||||||| | ||| ||||||| | ||| ||||||||||| | | ||||    
T  40346733 tttttatgaaaaagttgtgcaatcattatttgatcaaaaataacatcttatattttcaatacaaaatttctatatgtagattccttaaccattactctga 40346832  T
Q  158 gagcactggttagtaagac 176  Q
    |||||| |||||| |||||    
T  40346833 gagcaccggttagcaagac 40346851  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 30 - 151
Target Start/End: Complemental strand, 4978868 - 4978747
Alignment:
Q  30 cattggttaagcaaccaaaacaattcaatttttataaaaaagttgtgtaattattatttaatcaaaagtcaaaatttatattttcaagataaattttcta 129  Q
    |||||||||| || |||||| || | | |||||||||||| |||||||||| |||| || ||||||||| | |  |||||||||||||| |||  |||||    
T  4978868 cattggttaaacatccaaaataaataagtttttataaaaatgttgtgtaatcattacttgatcaaaagtaacatcttatattttcaagacaaaacttcta 4978769  T
Q  130 tttatagtttccttaaccaatg 151  Q
    || |||| ||  ||||||||||    
T  4978768 ttaatagattttttaaccaatg 4978747  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 105 - 178
Target Start/End: Original strand, 36087415 - 36087488
Alignment:
Q  105 ttatattttcaagataaattttctatttatagtttccttaaccaatgccctgagagcactggttagtaagaccc 178  Q
    ||||||||  |||||||| ||||||||| ||| ||||||||||| ||||||||| ||||| ||||| |||||||    
T  36087415 ttatatttctaagataaaatttctatttgtagattccttaaccattgccctgagggcactagttagcaagaccc 36087488  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 36 - 139
Target Start/End: Complemental strand, 6462701 - 6462598
Alignment:
Q  36 ttaagcaaccaaaacaattcaatttttataaaaaagttgtgtaattattatttaatcaaaagtcaaaatttatattttcaagataaattttctatttata 135  Q
    |||||||  |||||||| | | |||| ||||||||||||| |||||||||||| ||||||||| | | |||||||||  |||| | | ||||||||| ||    
T  6462701 ttaagcattcaaaacaaataagttttaataaaaaagttgtataattattattttatcaaaagtaatattttatatttataagacagaatttctatttgta 6462602  T
Q  136 gttt 139  Q
    ||||    
T  6462601 gttt 6462598  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 67 - 122
Target Start/End: Original strand, 37851286 - 37851341
Alignment:
Q  67 aaaagttgtgtaattattatttaatcaaaagtcaaaatttatattttcaagataaa 122  Q
    ||||||||||||||||||||||||| |||| | ||| |||||||||| ||||||||    
T  37851286 aaaagttgtgtaattattatttaattaaaaataaaactttatatttttaagataaa 37851341  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 28 - 131
Target Start/End: Complemental strand, 43131877 - 43131774
Alignment:
Q  28 ggcattggttaagcaaccaaaacaattcaatttttataaaaaagttgtgtaattattatttaatcaaaagtcaaaatttatattttcaagataaattttc 127  Q
    ||||||| |||| |||||||||||| | | |||||||||||| || |||||||||||| || |||||||||  ||| ||| ||||| |||| ||| |||     
T  43131877 ggcattgattaaacaaccaaaacaagtaagtttttataaaaaggtagtgtaattattacttgatcaaaagtataaacttacatttttaagacaaaatttt 43131778  T
Q  128 tatt 131  Q
    ||||    
T  43131777 tatt 43131774  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 58 - 148
Target Start/End: Complemental strand, 3201226 - 3201136
Alignment:
Q  58 tttttataaaaaagttgtgtaattattatttaatcaaaagtcaaaatttatattttcaagataaattttctatttatagtttccttaacca 148  Q
    ||||||| ||||| ||||||||| |||| |||||||||||| | | || ||||||||||||||||  |||||  | ||| |||||||||||    
T  3201226 tttttatcaaaaaattgtgtaatcattagttaatcaaaagtaatatttcatattttcaagataaaacttctacatgtagattccttaacca 3201136  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 30 - 136
Target Start/End: Complemental strand, 4996776 - 4996670
Alignment:
Q  30 cattggttaagcaaccaaaacaattcaatttttataaaaaagttgtgtaattattatttaatcaaaagtcaaaatttatattttcaagataaattttcta 129  Q
    |||||||||| || |||||| || | | |||||||||||| |||||||||| |||| || ||||||||| | |  |||||||||||||| |||  |||||    
T  4996776 cattggttaaacatccaaaataaataagtttttataaaaatgttgtgtaatcattacttgatcaaaagtaacatcttatattttcaagacaaaacttcta 4996677  T
Q  130 tttatag 136  Q
    || ||||    
T  4996676 ttaatag 4996670  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 29 - 146
Target Start/End: Original strand, 23453340 - 23453458
Alignment:
Q  29 gcattggttaagcaaccaaaacaattcaatttttata-aaaaagttgtgtaattattatttaatcaaaagtcaaaatttatattttcaagataaattttc 127  Q
    |||||||||||| | |||||||||   | |||||||  |||||||||||||||  |||||| ||||||||| | |  |||||||||||||| ||| |||     
T  23453340 gcattggttaagtatccaaaacaagcaagtttttatggaaaaagttgtgtaatctttatttgatcaaaagtaacatcttatattttcaagacaaaatttt 23453439  T
Q  128 tatttatagtttccttaac 146  Q
    ||||| ||| |||||||||    
T  23453440 tatttgtagattccttaac 23453458  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 67 - 148
Target Start/End: Original strand, 30905376 - 30905457
Alignment:
Q  67 aaaagttgtgtaattattatttaatcaaaagtcaaaatttatattttcaagataaattttctatttatagtttccttaacca 148  Q
    |||||||||||||||||||||| ||||  | | | || ||||||||| |||| ||| || ||||||||| ||||||||||||    
T  30905376 aaaagttgtgtaattattatttgatcaccaataacaacttatatttttaagacaaagttgctatttataatttccttaacca 30905457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 56 - 136
Target Start/End: Complemental strand, 23788496 - 23788416
Alignment:
Q  56 aatttttataaaaaagttgtgtaattattatttaatcaaaagtcaaaatttatattttcaagataaattttctatttatag 136  Q
    ||||||||| |||||||  ||||||||||| ||||| |||| | | ||||||||||||||| ||| |  ||||||||||||    
T  23788496 aatttttattaaaaagtaatgtaattattacttaataaaaaatgataatttatattttcaaaatataaattctatttatag 23788416  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 28 - 96
Target Start/End: Original strand, 41436320 - 41436388
Alignment:
Q  28 ggcattggttaagcaaccaaaacaattcaatttttataaaaaagttgtgtaattattatttaatcaaaa 96  Q
    |||| |||||||||| ||||||||| | | |||| || ||||||||||||||| ||||||| |||||||    
T  41436320 ggcaatggttaagcatccaaaacaagtaagttttcatgaaaaagttgtgtaatcattattttatcaaaa 41436388  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 29 - 96
Target Start/End: Original strand, 6315883 - 6315950
Alignment:
Q  29 gcattggttaagcaaccaaaacaattcaatttttataaaaaagttgtgtaattattatttaatcaaaa 96  Q
    ||||||||||| || ||||||||| | ||||||| ||||||| ||||||||| |||| || |||||||    
T  6315883 gcattggttaaacatccaaaacaaataaatttttgtaaaaaaattgtgtaatcattacttgatcaaaa 6315950  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 65 - 180
Target Start/End: Original strand, 9021505 - 9021620
Alignment:
Q  65 aaaaaagttgtgtaattattatttaatcaaaagtcaaaatttatattttcaagataaattttctatttatagtttccttaaccaatgccctgagagcact 164  Q
    |||||| | ||||||| |||||||| |||||| | | |  ||| |||| ||||| ||| |||||| |||| | ||||||||||||||||| | | |||||    
T  9021505 aaaaaaatagtgtaatcattatttagtcaaaaataacatcttacatttccaagacaaaatttctagttatgggttccttaaccaatgccccgggggcact 9021604  T
Q  165 ggttagtaagaccctt 180  Q
    | ||| ||||||||||    
T  9021605 gattaataagaccctt 9021620  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 28 - 131
Target Start/End: Original strand, 27896458 - 27896561
Alignment:
Q  28 ggcattggttaagcaaccaaaacaattcaatttttataaaaaagttgtgtaattattatttaatcaaaagtcaaaatttatattttcaagataaattttc 127  Q
    |||| ||||||| ||||||||| || | | |||| || |||||||||||||||||||| | |||||||||| | |  ||||||||  || | ||||||||    
T  27896458 ggcagtggttaaacaaccaaaataagtaagttttaattaaaaagttgtgtaattattactaaatcaaaagtaacagcttatatttctaaaacaaattttc 27896557  T
Q  128 tatt 131  Q
    ||||    
T  27896558 tatt 27896561  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 31 - 80
Target Start/End: Complemental strand, 43080420 - 43080371
Alignment:
Q  31 attggttaagcaaccaaaacaattcaatttttataaaaaagttgtgtaat 80  Q
    |||||||||||| ||||||||||  ||||||||| ||||| |||||||||    
T  43080420 attggttaagcatccaaaacaatcaaatttttatgaaaaaattgtgtaat 43080371  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 33 - 169
Target Start/End: Original strand, 13717178 - 13717313
Alignment:
Q  33 tggttaagcaaccaaaacaattcaatttttataaaaaagttgtgtaattattatttaatcaaaagtcaaaatttatattttcaagataaattttctattt 132  Q
    |||||||||| | |||| || | | |||| || |||||||| ||||||||||| ||| | |||| | | | ||||||||||||||| ||| |||||||||    
T  13717178 tggttaagcatctaaaataagtaagttttcatcaaaaagttatgtaattattacttattaaaaa-taacattttatattttcaagacaaaatttctattt 13717276  T
Q  133 atagtttccttaaccaatgccctgagagcactggtta 169  Q
     ||  ||||||||| | ||| ||||| |||| |||||    
T  13717277 gtatattccttaactattgctctgagggcaccggtta 13717313  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 56 - 168
Target Start/End: Original strand, 34334893 - 34335005
Alignment:
Q  56 aatttttataaaaaagttgtgtaattattatttaatcaaaagtcaaaatttatattttcaagataaattttctatttatagtttccttaaccaatgccct 155  Q
    |||||| || ||||| |||| |||| |||| ||||||||||||   |  ||||||| | |||||||| ||| ||| ||||| ||  ||||| |||| |||    
T  34334893 aattttaatgaaaaatttgtataatcattacttaatcaaaagtattatcttatattctgaagataaaatttatatgtatagattttttaactaatgtcct 34334992  T
Q  156 gagagcactggtt 168  Q
    |||||||||||||    
T  34334993 gagagcactggtt 34335005  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 115 - 147
Target Start/End: Complemental strand, 35710802 - 35710770
Alignment:
Q  115 aagataaattttctatttatagtttccttaacc 147  Q
    ||||||||||||||||||||||||| |||||||    
T  35710802 aagataaattttctatttatagttttcttaacc 35710770  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 86; Significance: 3e-41; HSPs: 47)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 86; E-Value: 3e-41
Query Start/End: Original strand, 26 - 179
Target Start/End: Complemental strand, 2908330 - 2908178
Alignment:
Q  26 agggcattggttaagcaaccaaaacaattcaatttttataaaaaagttgtgtaattattatttaatcaaaagtcaaaatttatattttcaagataaattt 125  Q
    |||||||||||||||||||||||| || | | |||||||| ||| || |||||||||||| ||| |||||| ||||||||||||||||||||| ||||||    
T  2908330 agggcattggttaagcaaccaaaataagtgactttttatagaaa-gtggtgtaattattacttactcaaaaatcaaaatttatattttcaagacaaattt 2908232  T
Q  126 tctatttatagtttccttaaccaatgccctgagagcactggttagtaagaccct 179  Q
    ||||||||||||||||||||||| |||| ||||  ||| |||||||||||||||    
T  2908231 tctatttatagtttccttaaccattgccgtgaggacaccggttagtaagaccct 2908178  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 58 - 183
Target Start/End: Complemental strand, 51100114 - 51099989
Alignment:
Q  58 tttttataaaaaagttgtgtaattattatttaatcaaaagtcaaaatttatattttcaagataaattttctatttatagtttccttaaccaatgccctga 157  Q
    ||||||| ||||||| |||||||||||| |||||||||||| |||| |||||||||||| ||||||||||||||||||| ||||||||||| |||| |||    
T  51100114 tttttattaaaaagtagtgtaattattacttaatcaaaagttaaaacttatattttcaaaataaattttctatttatagattccttaaccattgccttga 51100015  T
Q  158 gagcactggttagtaagacccttaaa 183  Q
    | ||||| ||||| ||||||||||||    
T  51100014 gggcactagttagaaagacccttaaa 51099989  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 77; E-Value: 7e-36
Query Start/End: Original strand, 31 - 155
Target Start/End: Original strand, 55090779 - 55090902
Alignment:
Q  31 attggttaagcaaccaaaacaattcaatttttataaaaaagttgtgtaattattatttaatcaaaagtcaaaatttatattttcaagataaattttctat 130  Q
    |||||||||||||| ||||||| | | ||||||||||| |||||||||||||| | ||||||||||||||||| |||||||||||||| |||||||  ||    
T  55090779 attggttaagcaactaaaacaagtaactttttataaaa-agttgtgtaattataacttaatcaaaagtcaaaacttatattttcaagacaaatttttcat 55090877  T
Q  131 ttatagtttccttaaccaatgccct 155  Q
    |||||||||||||||||||||||||    
T  55090878 ttatagtttccttaaccaatgccct 55090902  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 28 - 153
Target Start/End: Complemental strand, 16831218 - 16831094
Alignment:
Q  28 ggcattggttaagcaaccaaaacaattcaatttttataaaaaagttgtgtaattattatttaatcaaaagtcaaaatttatattttcaagataaattttc 127  Q
    ||||||| ||||||||||||||||| | | |||||||||||| || || ||||||||| ||||||||||||||||||||||||||| || | |||||||     
T  16831218 ggcattgattaagcaaccaaaacaaataactttttataaaaa-gtagtataattattacttaatcaaaagtcaaaatttatatttttaaaacaaatttta 16831120  T
Q  128 tatttatagtttccttaaccaatgcc 153  Q
    |||||||||||| |||||||| ||||    
T  16831119 tatttatagttttcttaaccattgcc 16831094  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 29 - 178
Target Start/End: Original strand, 53142777 - 53142926
Alignment:
Q  29 gcattggttaagcaaccaaaacaattcaatttttataaaaaagttgtgtaattattatttaatcaaaagtcaaaatttatattttcaagataaattttct 128  Q
    ||||||||||||||||| |||||| | | ||||||||||||| |  ||||||||||| |||||||||||| |||| ||||||||||| || ||||||| |    
T  53142777 gcattggttaagcaaccgaaacaaataactttttataaaaaaatgatgtaattattacttaatcaaaagttaaaacttatattttcatgacaaatttttt 53142876  T
Q  129 atttatagtttccttaaccaatgccctgagagcactggttagtaagaccc 178  Q
    |||||||| ||||||||||| ||  | |||  |||||||||| |||||||    
T  53142877 atttatagcttccttaaccattgttccgaggacactggttagcaagaccc 53142926  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 62; E-Value: 6e-27
Query Start/End: Original strand, 67 - 148
Target Start/End: Complemental strand, 45921418 - 45921337
Alignment:
Q  67 aaaagttgtgtaattattatttaatcaaaagtcaaaatttatattttcaagataaattttctatttatagtttccttaacca 148  Q
    ||||||||||||||||||| |||||||| |||||||| |||||||||||||| ||||||||||||||||| |||||||||||    
T  45921418 aaaagttgtgtaattattacttaatcaatagtcaaaacttatattttcaagacaaattttctatttatagattccttaacca 45921337  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 75 - 148
Target Start/End: Complemental strand, 28299361 - 28299288
Alignment:
Q  75 tgtaattattatttaatcaaaagtcaaaatttatattttcaagataaattttctatttatagtttccttaacca 148  Q
    ||||||||||||||||||||||| ||||| |||||||||||| |||||||||||||||||| ||||||||||||    
T  28299361 tgtaattattatttaatcaaaagacaaaacttatattttcaatataaattttctatttataatttccttaacca 28299288  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 26 - 139
Target Start/End: Complemental strand, 5645766 - 5645654
Alignment:
Q  26 agggcattggttaagcaaccaaaacaattcaatttttataaaaaagttgtgtaattattatttaatcaaaagtcaaaa-tttatattttcaagataaatt 124  Q
    |||||||| |||||| ||| ||||||| | | |||||||||||| || |||||||||||||||||||||||||||||| || || ||||||||| |||||    
T  5645766 agggcatttgttaag-aactaaaacaaataactttttataaaaa-gtagtgtaattattatttaatcaaaagtcaaaacttaattttttcaagacaaatt 5645669  T
Q  125 ttctatttatagttt 139  Q
    |||||||||||||||    
T  5645668 ttctatttatagttt 5645654  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 34 - 167
Target Start/End: Original strand, 9119242 - 9119375
Alignment:
Q  34 ggttaagcaaccaaaacaattcaatttttataa-aaaagttgtgtaattattatttaatcaaaagtcaaaatttatattttcaagataaattttctattt 132  Q
    ||||||||||||||||||| | ||||||| ||  |||||| |||||||| ||| ||||||||||||||||| |||||||||||  | |||||||||||||    
T  9119242 ggttaagcaaccaaaacaagt-aatttttttattaaaagtagtgtaattgttacttaatcaaaagtcaaaacttatattttcaccacaaattttctattt 9119340  T
Q  133 atagtttccttaaccaatgccctgagagcactggt 167  Q
    |||| ||| ||||||| ||||| ||| ||| ||||    
T  9119341 atagattctttaaccattgccccgagggcattggt 9119375  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 25 - 159
Target Start/End: Original strand, 27284064 - 27284198
Alignment:
Q  25 aagggcattggttaagcaaccaaaacaattcaatttttataaaaaagttgtgtaattattatttaatcaaaagtcaaaatttatattttcaagataaatt 124  Q
    ||||||||||||||| || |||||| || | | ||||||||||||||||||| ||| ||||||| ||||||||| | |  |||||||| ||||| ||| |    
T  27284064 aagggcattggttaaacatccaaaataaataagtttttataaaaaagttgtgcaatcattatttgatcaaaagtaacatcttatatttccaagacaaaat 27284163  T
Q  125 ttctatttatagtttccttaaccaatgccctgaga 159  Q
    |||||| | ||| ||||||||||| ||||||||||    
T  27284164 ttctatatgtagattccttaaccattgccctgaga 27284198  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 31 - 176
Target Start/End: Original strand, 48524493 - 48524636
Alignment:
Q  31 attggttaagcaaccaaaacaattcaatttttataaaaaagttgtgtaattattatttaatcaaaagtcaaaatttatattttcaagataaattttctat 130  Q
    |||| ||||||||||||||||| | | ||||||||||||| |||||||||||| ||  ||  |||| |||||| |||||||||| | | ||||||| |||    
T  48524493 attgattaagcaaccaaaacaagtaactttttataaaaaaattgtgtaattatgataaaa--aaaaatcaaaacttatattttctatacaaattttttat 48524590  T
Q  131 ttatagtttccttaaccaatgccctgagagcactggttagtaagac 176  Q
    ||||||||| ||||| || ||  ||||| |||||||||||||||||    
T  48524591 ttatagtttgcttaatcattgttctgagggcactggttagtaagac 48524636  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 26 - 177
Target Start/End: Original strand, 34236173 - 34236324
Alignment:
Q  26 agggcattggttaagcaaccaaaacaattcaatttttata-aaaaagttgtgtaattattatttaatcaaaagtcaaaatttatattttcaagataaatt 124  Q
    |||||||||||||| |||||||||||| | | ||||| || ||||| | |||||||||| | |||||||||||| ||| || ||||||||| || |||||    
T  34236173 agggcattggttaaacaaccaaaacaagtaattttttttataaaaaatagtgtaattatcacttaatcaaaagttaaactt-atattttcaggacaaatt 34236271  T
Q  125 ttctatttatagtttccttaaccaatgccctgagagcactggttagtaagacc 177  Q
    || ||||||||||||| ||||||| ||   |||| ||||||||||| ||||||    
T  34236272 ttttatttatagtttctttaaccattgttatgagggcactggttagcaagacc 34236324  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 77 - 157
Target Start/End: Original strand, 40298015 - 40298095
Alignment:
Q  77 taattattatttaatcaaaagtcaaaatttatattttcaagataaattttctatttatagtttccttaaccaatgccctga 157  Q
    ||||||| | |||||||||| |||||| |||||||||||| ||||||||||||||||||||||| ||||||| ||||||||    
T  40298015 taattatcacttaatcaaaaatcaaaacttatattttcaaaataaattttctatttatagtttcattaaccattgccctga 40298095  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 58 - 148
Target Start/End: Original strand, 4860143 - 4860232
Alignment:
Q  58 tttttataaaaaagttgtgtaattattatttaatcaaaagtcaaaatttatattttcaagataaattttctatttatagtttccttaacca 148  Q
    ||||||||||||||   ||||||||||| ||||||||||||||||| |||||||||||| | ||||||||||||| || ||||||||||||    
T  4860143 tttttataaaaaagga-tgtaattattacttaatcaaaagtcaaaacttatattttcaaaacaaattttctatttgtaatttccttaacca 4860232  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 58 - 148
Target Start/End: Complemental strand, 14347209 - 14347121
Alignment:
Q  58 tttttataaaaaagttgtgtaattattatttaatcaaaagtcaaaatttatattttcaagataaattttctatttatagtttccttaacca 148  Q
    ||||||||||||| | || ||||||||| |||||||||| |||||| ||||||||| |||||||||||| |||||||||||||||||||||    
T  14347209 tttttataaaaaa-tagtataattattacttaatcaaaaatcaaaacttatatttttaagataaatttt-tatttatagtttccttaacca 14347121  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 66 - 139
Target Start/End: Original strand, 32325057 - 32325130
Alignment:
Q  66 aaaaagttgtgtaattattatttaatcaaaagtcaaaatttatattttcaagataaattttctatttatagttt 139  Q
    ||||||| |||||||||||| ||||||||||||||||| |||||||||||||| ||||||| ||| ||||||||    
T  32325057 aaaaagtggtgtaattattacttaatcaaaagtcaaaaattatattttcaagacaaattttttatctatagttt 32325130  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 27 - 178
Target Start/End: Complemental strand, 41142413 - 41142262
Alignment:
Q  27 gggcattggttaagcaaccaaaacaattcaatttttataaaaaagttgtgtaattattatttaatcaaaagtcaaaatttatattttcaagataaatttt 126  Q
    ||||| ||||||||||  |||||||| | |||||| | ||||||||  |||||||||||||||||||||||| | |  |||| ||||||||| ||| |||    
T  41142413 gggcaatggttaagcattcaaaacaagtaaattttcacaaaaaagtaatgtaattattatttaatcaaaagtaagaccttattttttcaagacaaaattt 41142314  T
Q  127 ctatttatagtttccttaaccaatgccctgagagcactggttagtaagaccc 178  Q
     |||| ||   ||||||||||||||||| | | ||||||||||  |||||||    
T  41142313 ttattcatgaattccttaaccaatgccccgggggcactggttaacaagaccc 41142262  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 58 - 179
Target Start/End: Original strand, 12094983 - 12095104
Alignment:
Q  58 tttttataaaaaagttgtgtaattattatttaatcaaaagtcaaaatttatattttcaagataaattttctatttatagtttccttaaccaatgccctga 157  Q
    ||||||| ||||||||||||||| |||| || ||||||||| | |  ||||||||||||   ||| ||||||||| ||| ||||||||| | ||||| ||    
T  12094983 tttttatgaaaaagttgtgtaatcattactttatcaaaagtaatatcttatattttcaatgcaaaatttctatttgtagattccttaactattgccccga 12095082  T
Q  158 gagcactggttagtaagaccct 179  Q
    | ||||||||||| ||||||||    
T  12095083 gggcactggttagcaagaccct 12095104  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 25 - 157
Target Start/End: Complemental strand, 52837388 - 52837253
Alignment:
Q  25 aagggcattggttaagcaaccaaaacaattcaatttttataaaaaagttgtgtaattattatttaatcaaa---agtcaaaatttatattttcaagataa 121  Q
    |||||||||||||||||| |||||||||   ||||||||| ||||||||||||||| ||||  | ||||||   ||| | | ||||||| | ||||||||    
T  52837388 aagggcattggttaagcatccaaaacaagaaaatttttatgaaaaagttgtgtaataattacgtgatcaaaagtagtaacattttatatgtccaagataa 52837289  T
Q  122 attttctatttatagtttccttaaccaatgccctga 157  Q
    | ||||||||||||  ||||||||||| || |||||    
T  52837288 aatttctatttataaattccttaaccattgtcctga 52837253  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 30 - 153
Target Start/End: Complemental strand, 37461881 - 37461760
Alignment:
Q  30 cattggttaagcaaccaaaacaattcaatttttataaaaaagttgtgtaattattatttaatcaaaagtcaaaatttatattttcaagataaattttcta 129  Q
    ||||||||||||||  |||| || | | |||||||||||| || |||||||||||| ||||| |||| |||||||||||||||| || |  |||||||||    
T  37461881 cattggttaagcaattaaaataagtaactttttataaaaa-gtggtgtaattattacttaattaaaaatcaaaatttatatttttaa-aacaattttcta 37461784  T
Q  130 tttatagtttccttaaccaatgcc 153  Q
    |||||| |||| ||||||| ||||    
T  37461783 tttataatttctttaaccattgcc 37461760  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 30 - 148
Target Start/End: Original strand, 20775069 - 20775187
Alignment:
Q  30 cattggttaagcaaccaaaacaattcaatttttataaaaaagttgtgtaattattatttaatcaaaagtcaaaatttatattttcaagataaattttcta 129  Q
    ||||||||||||| ||||||||| | | ||||||| |||||||| |||||| ||||||| ||||||| | | |  ||||||||  |||| ||||||| ||    
T  20775069 cattggttaagcatccaaaacaagtaagtttttatgaaaaagttatgtaataattatttgatcaaaaataatatcttatatttctaagacaaatttttta 20775168  T
Q  130 tttatagtttccttaacca 148  Q
    ||||||| ||| |||||||    
T  20775169 tttatagattcattaacca 20775187  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 99 - 177
Target Start/End: Original strand, 53145195 - 53145273
Alignment:
Q  99 caaaatttatattttcaagataaattttctatttatagtttccttaaccaatgccctgagagcactggttagtaagacc 177  Q
    ||||| ||||||||||| |||||||||| ||||||||||||||||||||| || | |||| ||||| ||||| ||||||    
T  53145195 caaaacttatattttcatgataaattttttatttatagtttccttaaccattgtcttgagggcactagttagcaagacc 53145273  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 31 - 136
Target Start/End: Complemental strand, 50101395 - 50101290
Alignment:
Q  31 attggttaagcaaccaaaacaattcaatttttataaaaaagttgtgtaattattatttaatcaaaagtcaaaatttatattttcaagataaattttctat 130  Q
    |||| |||| ||| |||||||| | | ||||||||||||| |  | |||||| ||||||||||||| |||||| ||||||||| |||| ||||||| |||    
T  50101395 attgattaaacaatcaaaacaaataattttttataaaaaaatgatataattaatatttaatcaaaaatcaaaacttatatttttaagacaaattttttat 50101296  T
Q  131 ttatag 136  Q
    ||||||    
T  50101295 ttatag 50101290  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 77 - 148
Target Start/End: Original strand, 21762103 - 21762172
Alignment:
Q  77 taattattatttaatcaaaagtcaaaatttatattttcaagataaattttctatttatagtttccttaacca 148  Q
    |||||||||||||||||||||| |||||||||||||  |||| ||||||| |||||||| |||| |||||||    
T  21762103 taattattatttaatcaaaagttaaaatttatattt--aagacaaattttttatttataatttctttaacca 21762172  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 58 - 145
Target Start/End: Complemental strand, 2565499 - 2565412
Alignment:
Q  58 tttttataaaaaagttgtgtaattattatttaatcaaaagtcaaaatttatattttcaagataaattttctatttatagtttccttaa 145  Q
    |||||||| |||||||||||||| |||| || ||||||||| | | ||||| ||||||||||||| ||| ||||||||| ||| ||||    
T  2565499 tttttatagaaaagttgtgtaatcattacttgatcaaaagtaacattttatgttttcaagataaaatttatatttatagattctttaa 2565412  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 25 - 175
Target Start/End: Original strand, 48419065 - 48419215
Alignment:
Q  25 aagggcattggttaagcaaccaaaacaattcaatttttataaaaaagttgtgtaattattatttaatcaaaagtcaaaatttatattttcaagataaatt 124  Q
    ||||||| | ||||||||   ||||||| | | |||| || ||||||||||| ||| |||| || ||||||||| ||  |||| |||| ||| | ||| |    
T  48419065 aagggcaatagttaagcatataaaacaagtaagttttcatgaaaaagttgtgcaatcattactttatcaaaagtaaagttttacatttccaaaacaaaat 48419164  T
Q  125 ttctatttatagtttccttaaccaatgccctgagagcactggttagtaaga 175  Q
    |||||||| ||| ||||||||||| ||||||||| ||| ||||||| ||||    
T  48419165 ttctatttgtagattccttaaccactgccctgagggcattggttagcaaga 48419215  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 56 - 148
Target Start/End: Complemental strand, 31242042 - 31241949
Alignment:
Q  56 aatttttataaaaaagttgtgtaattattatttaatcaaaagtcaaaatttatattttcaagata-aattttctatttatagtttccttaacca 148  Q
    ||||||||| |||||||  ||||||||||||||||| |||||| |   ||||||||||||||| | ||  |||||||||||| |||||||||||    
T  31242042 aatttttattaaaaagtaatgtaattattatttaataaaaagtgaccgtttatattttcaagacagaaaattctatttatagattccttaacca 31241949  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 75 - 148
Target Start/End: Complemental strand, 32651996 - 32651924
Alignment:
Q  75 tgtaattattatttaatcaaaagtcaaaatttatattttcaagataaattttctatttatagtttccttaacca 148  Q
    ||||||||||| ||| |||||||| |||||||||||||| |||||||| ||| ||||||||| || ||||||||    
T  32651996 tgtaattattacttattcaaaagttaaaatttatatttttaagataaaattt-tatttataggtttcttaacca 32651924  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 58 - 158
Target Start/End: Complemental strand, 31089872 - 31089773
Alignment:
Q  58 tttttataaaaaagttgtgtaattattatttaatcaaaagtcaaaatttatattttcaagataaattttctatttatagtttccttaaccaatgccctga 157  Q
    ||||||| ||||||||||||||| |||| || ||||||||| || |||||||||| | ||| ||| ||||||||  ||| |||||||| || ||||||||    
T  31089872 tttttatgaaaaagttgtgtaatcattactttatcaaaagt-aacatttatatttcctagacaaaatttctattggtagattccttaatcattgccctga 31089774  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 67 - 122
Target Start/End: Original strand, 18093682 - 18093737
Alignment:
Q  67 aaaagttgtgtaattattatttaatcaaaagtcaaaatttatattttcaagataaa 122  Q
    ||||||||||||||||||||||||| |||| | ||| |||||||||| ||||||||    
T  18093682 aaaagttgtgtaattattatttaattaaaaataaaactttatatttttaagataaa 18093737  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 100 - 179
Target Start/End: Original strand, 19480703 - 19480782
Alignment:
Q  100 aaaatttatattttcaagataaattttctatttatagtttccttaaccaatgccctgagagcactggttagtaagaccct 179  Q
    |||| |||||||||||||| ||| ||| ||||||||  ||| ||||||| ||||||||||||||||  ||| ||||||||    
T  19480703 aaaaattatattttcaagacaaaatttttatttataaattctttaaccattgccctgagagcactgaatagcaagaccct 19480782  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 25 - 145
Target Start/End: Original strand, 30694278 - 30694395
Alignment:
Q  25 aagggcattggttaagcaaccaaaacaattcaatttttataaaaaagttgtgtaattattatttaatcaaaagtcaaaatttatattttcaagataaatt 124  Q
    ||||| |||||||| ||||||||||||| | | |||| | |||| ||  || ||||||||| || |||||||   | || |||||||||||||| ||| |    
T  30694278 aagggaattggttatgcaaccaaaacaagtaagttttcacaaaacagaggtataattattacttgatcaaaa---acaacttatattttcaagacaaaat 30694374  T
Q  125 ttctatttatagtttccttaa 145  Q
    |||||||||| ||||||||||    
T  30694375 ttctatttatggtttccttaa 30694395  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 82 - 136
Target Start/End: Original strand, 37992901 - 37992955
Alignment:
Q  82 attatttaatcaaaagtcaaaatttatattttcaagataaattttctatttatag 136  Q
    |||| |||||||||| ||||||||||||||||||| | |||| ||||||||||||    
T  37992901 attacttaatcaaaaatcaaaatttatattttcaaaacaaatcttctatttatag 37992955  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 90 - 151
Target Start/End: Complemental strand, 32544037 - 32543977
Alignment:
Q  90 atcaaaagtcaaaatttatattttcaagataaattttctatttatagtttccttaaccaatg 151  Q
    ||||||||| |||||||||||||||  || ||||||| ||||||||| ||||||||||||||    
T  32544037 atcaaaagt-aaaatttatattttctcgacaaattttttatttatagattccttaaccaatg 32543977  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 75 - 148
Target Start/End: Complemental strand, 32653922 - 32653850
Alignment:
Q  75 tgtaattattatttaatcaaaagtcaaaatttatattttcaagataaattttctatttatagtttccttaacca 148  Q
    ||||||||||| ||| |||||||| |||||||||||||| |||||||| ||| | ||||||| || ||||||||    
T  32653922 tgtaattattacttattcaaaagttaaaatttatatttttaagataaaattt-tgtttataggtttcttaacca 32653850  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 66 - 179
Target Start/End: Complemental strand, 42595264 - 42595151
Alignment:
Q  66 aaaaagttgtgtaattattatttaatcaaaagtcaaaatttatattttcaagataaattttctatttatagtttccttaaccaatgccctgagagcactg 165  Q
    ||||| ||||||||| |||| || ||||||||| | | ||||||||||||| | ||||||| |||| |||| ||| ||||| | |||||| ||  ||||     
T  42595264 aaaaaattgtgtaatcattactttatcaaaagtaacattttatattttcaaaacaaattttatattcatagattctttaactattgccctaaggacacta 42595165  T
Q  166 gttagtaagaccct 179  Q
    ||||| ||||||||    
T  42595164 gttagcaagaccct 42595151  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 36 - 128
Target Start/End: Original strand, 19248892 - 19248983
Alignment:
Q  36 ttaagcaaccaaaacaattcaatttttataaaaaagttgtgtaattattatttaatcaaaagtcaaaatttatattttcaagataaattttct 128  Q
    ||||| ||||||||||| | | ||||||| |||||||  |||||| |||| ||||| |||| |||||| ||||||||| |||| |||||||||    
T  19248892 ttaaggaaccaaaacaactaattttttat-aaaaagtgatgtaatcattacttaattaaaaatcaaaacttatatttttaagacaaattttct 19248983  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 27 - 154
Target Start/End: Original strand, 48202479 - 48202607
Alignment:
Q  27 gggcattggttaagcaaccaaaacaattcaatttttataaaaaagttgtgtaattattatttaatcaaaagtcaaaa-tttatattttcaagataaattt 125  Q
    ||||||||||||||||| |||||||  | | ||||||||| || || |||||||||||| || ||||||||  |||| ||| | ||||||||  ||| ||    
T  48202479 gggcattggttaagcaaacaaaacaggtaagtttttataagaaggtagtgtaattattacttcatcaaaagcaaaaacttttttttttcaaggcaaaatt 48202578  T
Q  126 tctatttatagtttccttaaccaatgccc 154  Q
    ||||||||  | || |||||||| |||||    
T  48202579 tctatttaaggatttcttaaccagtgccc 48202607  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 75 - 139
Target Start/End: Original strand, 48400920 - 48400984
Alignment:
Q  75 tgtaattattatttaatcaaaagtcaaaatttatattttcaagataaattttctatttatagttt 139  Q
    |||| |||||| ||||| ||| || ||||||||||||||||| | ||||||| ||||||||||||    
T  48400920 tgtagttattacttaattaaatgttaaaatttatattttcaaaacaaattttttatttatagttt 48400984  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 127 - 178
Target Start/End: Original strand, 20435932 - 20435983
Alignment:
Q  127 ctatttatagtttccttaaccaatgccctgagagcactggttagtaagaccc 178  Q
    |||||| ||||||||||||||| || | |||||||||||||||| |||||||    
T  20435932 ctatttttagtttccttaaccattgtcatgagagcactggttagcaagaccc 20435983  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 137 - 180
Target Start/End: Original strand, 51018499 - 51018542
Alignment:
Q  137 tttccttaaccaatgccctgagagcactggttagtaagaccctt 180  Q
    |||| ||||||| |||||||||||||| ||||||||||||||||    
T  51018499 tttctttaaccattgccctgagagcaccggttagtaagaccctt 51018542  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 30 - 148
Target Start/End: Complemental strand, 16341218 - 16341100
Alignment:
Q  30 cattggttaagcaaccaaaacaattcaatttttataaaaaagttgtgtaattattatttaatcaaaagtcaaaatttatattttcaagataaattttcta 129  Q
    |||||||||| || |||||| || | ||||||||| ||||| || |||||| |||| |||||||||||| | | |||||||||  |||| |||  || ||    
T  16341218 cattggttaaacatccaaaataaataaatttttatgaaaaaattatgtaatcattacttaatcaaaagtaacattttatatttcaaagacaaaaatttta 16341119  T
Q  130 tttatagtttccttaacca 148  Q
    ||| ||  |||||||||||    
T  16341118 tttgtaaattccttaacca 16341100  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 65 - 151
Target Start/End: Original strand, 21755907 - 21755993
Alignment:
Q  65 aaaaaagttgtgtaattattatttaatcaaaagtcaaaatttatattttcaagataaattttctatttatagtttccttaaccaatg 151  Q
    |||||| | ||||||| |||||||||| |||| | | | ||||||||||| ||| ||| |||||||||||   ||||||||||||||    
T  21755907 aaaaaaatggtgtaatcattatttaataaaaaataatattttatattttcgagacaaaatttctatttatgagttccttaaccaatg 21755993  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 112 - 169
Target Start/End: Complemental strand, 28668454 - 28668396
Alignment:
Q  112 ttcaagataaattttctatttatagtttccttaacca-atgccctgagagcactggtta 169  Q
    ||||||| ||||||||||||||||| ||||||||||| ||  ||||||||||| |||||    
T  28668454 ttcaagacaaattttctatttatagattccttaaccacattacctgagagcaccggtta 28668396  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 30 - 84
Target Start/End: Complemental strand, 35808621 - 35808568
Alignment:
Q  30 cattggttaagcaaccaaaacaattcaatttttataaaaaagttgtgtaattatt 84  Q
    |||||||||||||||||||| || | | |||||||| ||||||||||||||||||    
T  35808621 cattggttaagcaaccaaaataagtaactttttata-aaaagttgtgtaattatt 35808568  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 143 - 181
Target Start/End: Original strand, 38675919 - 38675957
Alignment:
Q  143 taaccaatgccctgagagcactggttagtaagaccctta 181  Q
    |||||| ||||||||||||| ||||||||||||||||||    
T  38675919 taaccattgccctgagagcaatggttagtaagaccctta 38675957  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 66 - 170
Target Start/End: Complemental strand, 31861508 - 31861404
Alignment:
Q  66 aaaaagttgtgtaattattatttaatcaaaagtcaaaatttatattttcaagataaattttctatttatagtttccttaaccaatgccctgagagcactg 165  Q
    ||||| ||||||||| |||| || ||||||||| | |  |||||||| ||| ||||| ||| ||| | ||  |||||||| |||| ||||||| ||||||    
T  31861508 aaaaatttgtgtaatcattacttgatcaaaagtaacatcttatatttccaaaataaaatttttatatgtaaattccttaatcaataccctgagggcactg 31861409  T
Q  166 gttag 170  Q
    |||||    
T  31861408 gttag 31861404  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 85; Significance: 1e-40; HSPs: 37)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 85; E-Value: 1e-40
Query Start/End: Original strand, 26 - 178
Target Start/End: Original strand, 24937825 - 24937976
Alignment:
Q  26 agggcattggttaagcaaccaaaacaattcaatttttataaaaaagttgtgtaattattatttaatcaaaagtcaaaatttatattttcaagataaattt 125  Q
    ||||||||||||||| |||||||| || | | |||||||||||| || |||||||||||| ||||| |||||||||||| |||||||| || | ||||||    
T  24937825 agggcattggttaaggaaccaaaataagtaactttttataaaaa-gtggtgtaattattacttaattaaaagtcaaaatctatatttttaaaacaaattt 24937923  T
Q  126 tctatttatagtttccttaaccaatgccctgagagcactggttagtaagaccc 178  Q
    ||||||||||||||||||||||| ||||||||| ||||||||||| |||||||    
T  24937924 tctatttatagtttccttaaccattgccctgagggcactggttagcaagaccc 24937976  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 30 - 183
Target Start/End: Original strand, 8656291 - 8656446
Alignment:
Q  30 cattggttaagcaaccaaaacaattcaatttt-tataaaaaagttgtgtaattattatttaatcaaaagtcaaaatttatattttcaagataaattttct 128  Q
    ||||||||||||||||||||||| | | |||| ||||||||||| || ||||||||| |||||||||||| |||| |||| |||| |||| |||||||||    
T  8656291 cattggttaagcaaccaaaacaagtgacttttttataaaaaagtggtataattattacttaatcaaaagttaaaacttatttttttaagacaaattttct 8656390  T
Q  129 atttatagtttccttaaccaatg-ccctgagagcactggttagtaagacccttaaa 183  Q
    |||||||||||||||||||| || |  ||||| |||||||||| ||||||||||||    
T  8656391 atttatagtttccttaaccattgtctttgagaacactggttagcaagacccttaaa 8656446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 74; E-Value: 4e-34
Query Start/End: Original strand, 33 - 177
Target Start/End: Complemental strand, 37532668 - 37532523
Alignment:
Q  33 tggttaagcaaccaaaacaattcaattttt-ataaaaaagttgtgtaattattatttaatcaaaagtcaaaatttatattttcaagataaattttctatt 131  Q
    ||||||||||||| |||||| | | ||||| |||||||| | |||||||||||  ||||||||||||| ||||||||||||| || ||||||||| || |    
T  37532668 tggttaagcaaccgaaacaagtaacttttttataaaaaaatggtgtaattatttcttaatcaaaagtcgaaatttatatttttaatataaattttatact 37532569  T
Q  132 tatagtttccttaaccaatgccctgagagcactggttagtaagacc 177  Q
    ||||||||||||||||| | ||||||||||||||||||| ||||||    
T  37532568 tatagtttccttaaccacttccctgagagcactggttagcaagacc 37532523  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 28 - 181
Target Start/End: Complemental strand, 39786570 - 39786418
Alignment:
Q  28 ggcattggttaagcaaccaaaacaattcaatttttataaaaaagttgtgtaattattatttaatcaaaagtcaaaatttatattttcaagataaattttc 127  Q
    ||||||||||||||||||||||||| | | |||||    |||||| ||||||||||||||||||||||||| |||| |||||||||||||| || |||||    
T  39786570 ggcattggttaagcaaccaaaacaaataacttttttattaaaagtagtgtaattattatttaatcaaaagttaaaacttatattttcaagacaagttttc 39786471  T
Q  128 tatttatagtttccttaaccaatgccctgagagcactggttagtaagaccctta 181  Q
    ||||||||| ||||||||||| || || ||| | | ||||||| ||||||||||    
T  39786470 tatttatagattccttaaccattgtcccgag-ggattggttagcaagaccctta 39786418  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 30 - 144
Target Start/End: Original strand, 47537423 - 47537536
Alignment:
Q  30 cattggttaagcaaccaaaacaattcaatttttataaaaaagttgtgtaattattatttaatcaaaagtcaaaatttatattttcaagataaattttcta 129  Q
    |||| |||||||||| ||||||  | | ||||||||||| |||||||||||||||| |||||||||| |||||| |||||||||||||| |||||||  |    
T  47537423 cattagttaagcaactaaaacaggtaactttttataaaa-agttgtgtaattattacttaatcaaaaatcaaaacttatattttcaagacaaatttttca 47537521  T
Q  130 tttatagtttcctta 144  Q
    |||||||||||||||    
T  47537522 tttatagtttcctta 47537536  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 25 - 181
Target Start/End: Original strand, 19676987 - 19677143
Alignment:
Q  25 aagggcattggttaagcaaccaaaacaattcaatttttataaaaaagttgtgtaattattatttaatcaaaagtcaaaatttatattttcaagataaatt 124  Q
    |||||||||||||||||| || ||||||   | ||||  |  ||||| |||||||| |||| |||||||||||| | |  |||||||||||||| ||| |    
T  19676987 aagggcattggttaagcatcctaaacaagcaagttttggtgtaaaaggtgtgtaatcattacttaatcaaaagtaacatcttatattttcaagacaaaat 19677086  T
Q  125 ttctatttatagtttccttaaccaatgccctgagagcactggttagtaagaccctta 181  Q
    |||||||| | | ||||||||||||||||||||| ||| ||||||| ||||||||||    
T  19677087 ttctatttgtcgattccttaaccaatgccctgagggcattggttagcaagaccctta 19677143  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 25 - 148
Target Start/End: Original strand, 37928292 - 37928415
Alignment:
Q  25 aagggcattggttaagcaaccaaaacaattcaatttttataaaaaagttgtgtaattattatttaatcaaaagtcaaaatttatattttcaagataaatt 124  Q
    |||| |||||||||| || |||||| || | | ||||||||||||||||||||||| |||| || ||||||| | | | ||||||||||||||||||| |    
T  37928292 aaggacattggttaaacatccaaaataagtaagtttttataaaaaagttgtgtaataattactttatcaaaaataacattttatattttcaagataaaat 37928391  T
Q  125 ttctatttatagtttccttaacca 148  Q
    || ||||||||| ||| |||||||    
T  37928392 ttatatttatagattctttaacca 37928415  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 67 - 170
Target Start/End: Original strand, 39386939 - 39387042
Alignment:
Q  67 aaaagttgtgtaattattatttaatcaaaagtcaaaatttatattttcaagataaattttctatttatagtttccttaaccaatgccctgagagcactgg 166  Q
    ||||||||| | ||||||| || ||||||||| |||||||||||||| | |||||||||| ||||||||||||| ||||||| | || ||||||||| ||    
T  39386939 aaaagttgtatgattattacttgatcaaaagttaaaatttatatttttaggataaattttttatttatagtttctttaaccattaccttgagagcaccgg 39387038  T
Q  167 ttag 170  Q
    ||||    
T  39387039 ttag 39387042  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 66 - 159
Target Start/End: Complemental strand, 1112232 - 1112139
Alignment:
Q  66 aaaaagttgtgtaattattatttaatcaaaagtcaaaatttatattttcaagataaattttctatttatagtttccttaaccaatgccctgaga 159  Q
    |||| ||||||||||||||| || || ||||||||||||||||| |||||| | ||||||||||||||||||||||| || || ||| ||||||    
T  1112232 aaaatgttgtgtaattattacttcattaaaagtcaaaatttataatttcaaaacaaattttctatttatagtttcctcaatcattgctctgaga 1112139  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 25 - 129
Target Start/End: Original strand, 16979934 - 16980038
Alignment:
Q  25 aagggcattggttaagcaaccaaaacaattcaatttttataaaaaagttgtgtaattattatttaatcaaaagtcaaaatttatattttcaagataaatt 124  Q
    |||||||||||||||||| ||||||||| | ||||||||| |||||||||||| ||||||| |  ||||||||| | |  |||||||||||||| ||| |    
T  16979934 aagggcattggttaagcatccaaaacaagtaaatttttatgaaaaagttgtgtgattattactcgatcaaaagtaacatcttatattttcaagacaaaat 16980033  T
Q  125 ttcta 129  Q
    |||||    
T  16980034 ttcta 16980038  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 31 - 176
Target Start/End: Complemental strand, 31487825 - 31487680
Alignment:
Q  31 attggttaagcaaccaaaacaattcaatttttataaaaaagttgtgtaattattatttaatcaaaagtcaaaatttatattttcaagataaattttctat 130  Q
    ||||||||| || |||||| || | | ||||||  ||||| |||||||||||||| ||||| |||| | | |  |||||||| ||||||||| |||||||    
T  31487825 attggttaaacatccaaaataaataagtttttaagaaaaaattgtgtaattattacttaataaaaaataacatcttatatttccaagataaaatttctat 31487726  T
Q  131 ttatagtttccttaaccaatgccctgagagcactggttagtaagac 176  Q
    | |||  || | |||||||||||||||||||||| ||||| |||||    
T  31487725 taataaattacctaaccaatgccctgagagcactagttagcaagac 31487680  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 27 - 154
Target Start/End: Complemental strand, 47445475 - 47445348
Alignment:
Q  27 gggcattggttaagcaaccaaaacaattcaatttttataaaaaagttgtgtaattattatttaatcaaaagtcaaaatttatattttcaagataaatttt 126  Q
    ||||||||||||||| |||| ||||  | | ||||||||||||| | || ||||||||| || ||||||||| |||| ||||||||||||   ||| |||    
T  47445475 gggcattggttaagcgaccagaacatgtaagtttttataaaaaaatagtttaattattacttcatcaaaagtaaaaacttatattttcaaagcaaaattt 47445376  T
Q  127 ctatttatagtttccttaaccaatgccc 154  Q
    |||||||  | ||||||||||| |||||    
T  47445375 ctatttaaggattccttaaccagtgccc 47445348  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 58 - 188
Target Start/End: Original strand, 8746161 - 8746290
Alignment:
Q  58 tttttataaaaaagttgtgtaattattatttaatcaaaagtcaaaatttatattttcaagataaattttctatttatagtttccttaaccaatgccctga 157  Q
    ||||||| |||||||||| |||| ||||||| ||||||||| | | | ||||||| ||||| ||| ||| ||||  ||||| |||||||||||||| |||    
T  8746161 tttttatgaaaaagttgtataatcattatttgatcaaaagtaacattctatatttacaagacaaaatttttattagtagtt-ccttaaccaatgccttga 8746259  T
Q  158 gagcactggttagtaagacccttaaataaaa 188  Q
    ||| ||  ||||  |||||||||||||||||    
T  8746260 gagtaccagttaacaagacccttaaataaaa 8746290  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 28 - 148
Target Start/End: Complemental strand, 1309842 - 1309722
Alignment:
Q  28 ggcattggttaagcaaccaaaacaattcaatttttataaaaaagttgtgtaattattatttaatcaaaagtcaaaatttatattttcaagataaattttc 127  Q
    |||||||||||| || |||||| || | ||||||||| ||||| |||||||||  |||||| || |||||| |    ||||||||| |||||||| ||||    
T  1309842 ggcattggttaaacatccaaaataaataaatttttatgaaaaaattgtgtaatagttatttgataaaaagtaacgtattatatttttaagataaaatttc 1309743  T
Q  128 tatttatagtttccttaacca 148  Q
    ||||| ||| |||||||||||    
T  1309742 tatttgtagattccttaacca 1309722  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 25 - 167
Target Start/End: Complemental strand, 41064426 - 41064280
Alignment:
Q  25 aagggcattggttaagcaaccaaaacaattcaatttttataaaaaagttgtgtaattattatttaatcaaaagtcaaa----atttatattttcaagata 120  Q
    ||||||||| |||||||| |||||| || | | |||| ||||||||||||| |||  |||| || ||||||||| | |    || |||||||||||||||    
T  41064426 aagggcatttgttaagcatccaaaataaataagttttaataaaaaagttgtctaaccattacttgatcaaaagtaacatcttatatatattttcaagata 41064327  T
Q  121 aattttctatttatagtttccttaaccaatgccctgagagcactggt 167  Q
    || ||||||||||||  | ||||||||| | || | |||||||||||    
T  41064326 aaatttctatttataaatcccttaaccattaccttaagagcactggt 41064280  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 58 - 146
Target Start/End: Complemental strand, 8117532 - 8117444
Alignment:
Q  58 tttttataaaaaagttgtgtaattattatttaatcaaaagtcaaaatttatattttcaagataaattttctatttatagtttccttaac 146  Q
    ||||||| |||||||  ||||||||||||||||| |||| | | ||||||||||||||||| | |  |||||||||||| |||| ||||    
T  8117532 tttttattaaaaagtaatgtaattattatttaataaaaaataacaatttatattttcaagacataaattctatttatagattccataac 8117444  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 33 - 145
Target Start/End: Complemental strand, 11740474 - 11740362
Alignment:
Q  33 tggttaagcaaccaaaacaattcaatttttataaaaaagttgtgtaattattatttaatcaaaagtcaaaatttatattttcaagataaattttctattt 132  Q
    ||||||||||  ||||| || | || |||||| ||||||| ||||||| |||| || ||||||||| | | ||||||||||||||| || |||||||||     
T  11740474 tggttaagcaggcaaaagaagtaaaattttattaaaaagtggtgtaataattagttgatcaaaagtaacagtttatattttcaagacaatttttctatta 11740375  T
Q  133 atagtttccttaa 145  Q
     ||| ||||||||    
T  11740374 ttagattccttaa 11740362  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 67 - 183
Target Start/End: Original strand, 21515053 - 21515169
Alignment:
Q  67 aaaagttgtgtaattattatttaatcaaaagtcaaaatttatattttcaagataaattttctatttatagtttccttaaccaatgccctgagagcactgg 166  Q
    ||||| |||||||||||||||| || |||||| | |  || |||||||| | |||| ||||||||||||| ||||||||  |||  | |||||||||||     
T  21515053 aaaaggtgtgtaattattatttgattaaaagtaacatcttgtattttcatgttaaaatttctatttatagattccttaattaatatcatgagagcactga 21515152  T
Q  167 ttagtaagacccttaaa 183  Q
    |||| |||| |||||||    
T  21515153 ttagcaagatccttaaa 21515169  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 67 - 135
Target Start/End: Complemental strand, 21857679 - 21857611
Alignment:
Q  67 aaaagttgtgtaattattatttaatcaaaagtcaaaatttatattttcaagataaattttctatttata 135  Q
    |||||| |||||||||||| |||| ||||  |||||| |||||||| ||||| ||||||||||||||||    
T  21857679 aaaagtagtgtaattattaattaaccaaatatcaaaacttatatttacaagacaaattttctatttata 21857611  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 75 - 134
Target Start/End: Original strand, 22555747 - 22555806
Alignment:
Q  75 tgtaattattatttaatcaaaagtcaaaatttatattttcaagataaattttctatttat 134  Q
    ||||||||||| || ||||||| |||||| ||||||||| |||||||| |||||||||||    
T  22555747 tgtaattattacttgatcaaaaatcaaaacttatattttaaagataaaatttctatttat 22555806  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 46 - 151
Target Start/End: Complemental strand, 18037950 - 18037845
Alignment:
Q  46 aaaacaattcaatttttataaaaaagttgtgtaattattatttaatcaaaagtcaaaatttatattttcaagataaattttctatttatagtttccttaa 145  Q
    ||||||| | ||||||||| |||||    |||||||||||||| ||||||||| | ||||||||||||||| | ||| ||| ||||||| | || |||||    
T  18037950 aaaacaaataaatttttattaaaaaacgatgtaattattatttgatcaaaagtaacaatttatattttcaaaacaaaatttttatttatggatttcttaa 18037851  T
Q  146 ccaatg 151  Q
     |||||    
T  18037850 tcaatg 18037845  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 78 - 139
Target Start/End: Original strand, 25780245 - 25780306
Alignment:
Q  78 aattattatttaatcaaaagtcaaaatttatattttcaagataaattttctatttatagttt 139  Q
    |||||||| ||||| ||||||||||| |||||||||  ||| ||||||| ||||||||||||    
T  25780245 aattattacttaattaaaagtcaaaacttatatttttcagacaaattttttatttatagttt 25780306  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 58 - 158
Target Start/End: Complemental strand, 18221074 - 18220974
Alignment:
Q  58 tttttataaaaaagttgtgtaattattatttaatcaaaagtcaaaatttatattttcaagataaattttctatttatagtttccttaaccaatgccctga 157  Q
    ||||||| |||||||||| ||||||||| ||||||||| || | |  |||||||| ||||  |||  |||||||  ||| ||||||||||||| ||||||    
T  18221074 tttttatgaaaaagttgtataattattacttaatcaaatgtaacatcttatatttccaagtcaaaacttctattagtagattccttaaccaataccctga 18220975  T
Q  158 g 158  Q
    |    
T  18220974 g 18220974  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 108 - 176
Target Start/End: Original strand, 18756938 - 18757006
Alignment:
Q  108 tattttcaagataaattttctatttatagtttccttaaccaatgccctgagagcactggttagtaagac 176  Q
    ||||| ||||| ||| ||||||||| ||| |||||||| ||||||| |||| ||||||||||| |||||    
T  18756938 tatttgcaagacaaaatttctatttgtagattccttaatcaatgccatgagggcactggttagcaagac 18757006  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 89 - 145
Target Start/End: Complemental strand, 27915251 - 27915195
Alignment:
Q  89 aatcaaaagtcaaaatttatattttcaagataaattttctatttatagtttccttaa 145  Q
    ||||||||||||||| ||||||||| || | ||||||||||| |||| |||||||||    
T  27915251 aatcaaaagtcaaaacttatatttttaacacaaattttctatatataatttccttaa 27915195  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 30 - 154
Target Start/End: Complemental strand, 41760455 - 41760331
Alignment:
Q  30 cattggttaagcaaccaaaacaattcaatttttataaaaaagttgtgtaattattatttaatcaaaagtcaaaatttatattttcaagataaattttcta 129  Q
    ||||||||||||| ||||||  | | |  |||||| ||||||||||||||| |||| || || |||| | |||| ||| ||||| |||| | | ||||||    
T  41760455 cattggttaagcatccaaaaagaataagattttattaaaaagttgtgtaataattacttgataaaaaataaaaacttacatttttaagacataatttcta 41760356  T
Q  130 tttatagtttccttaaccaatgccc 154  Q
    ||| ||||||| ||||||| |||||    
T  41760355 tttttagtttctttaaccagtgccc 41760331  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 74 - 117
Target Start/End: Original strand, 4036094 - 4036137
Alignment:
Q  74 gtgtaattattatttaatcaaaagtcaaaatttatattttcaag 117  Q
    ||||||||||||||| ||||| ||| ||||||||||||||||||    
T  4036094 gtgtaattattatttgatcaagagtaaaaatttatattttcaag 4036137  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 26 - 129
Target Start/End: Complemental strand, 7833864 - 7833761
Alignment:
Q  26 agggcattggttaagcaaccaaaacaattcaatttttataaaaaagttgtgtaattattatttaatcaaaagtcaaaatttatattttcaagataaattt 125  Q
    ||||||||||||||||| ||||||||| | |  |||||| ||||||| ||| ||| |||| ||  |||||| | | | ||||||||||||||| || |||    
T  7833864 agggcattggttaagcagccaaaacaagtaagattttattaaaaagtagtgcaataattagttggtcaaaaataacagtttatattttcaagacaatttt 7833765  T
Q  126 tcta 129  Q
    ||||    
T  7833764 tcta 7833761  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 31 - 118
Target Start/End: Original strand, 33194720 - 33194807
Alignment:
Q  31 attggttaagcaaccaaaacaattcaatttttataaaaaagttgtgtaattattatttaatcaaaagtcaaaatttatattttcaaga 118  Q
    |||||||||||||| |||| || | ||||||||  ||||||| ||||||| |||| ||||||||| || | | |||||||||| ||||    
T  33194720 attggttaagcaactaaaataagtaaatttttaataaaaagtagtgtaatcattacttaatcaaatgtgatagtttatatttttaaga 33194807  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 106 - 148
Target Start/End: Complemental strand, 28664587 - 28664545
Alignment:
Q  106 tatattttcaagataaattttctatttatagtttccttaacca 148  Q
    ||||||||||| | ||||||||||||||||| |||||||||||    
T  28664587 tatattttcaatacaaattttctatttatagattccttaacca 28664545  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 58 - 135
Target Start/End: Original strand, 40721412 - 40721489
Alignment:
Q  58 tttttataaaaaagttgtgtaattattatttaatcaaaa-gtcaaaatttatattttcaagataaattttctatttata 135  Q
    ||||||||||||| | ||||||||| || |||||||||| || |||| ||||||||| | || ||||||||||||||||    
T  40721412 tttttataaaaaa-tggtgtaattactacttaatcaaaaagttaaaacttatatttttatgacaaattttctatttata 40721489  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 31 - 158
Target Start/End: Original strand, 16685729 - 16685858
Alignment:
Q  31 attggttaagcaaccaaaacaattcaatttttata-aaaaagttgtgtaattattatttaatcaaa-agtcaaaatttatattttcaagataaattttct 128  Q
    |||||||||||| |||||| || | | |||||||  ||||||||||||||| |||| || |||||| ||| | |  ||||||||  |||| |||  ||||    
T  16685729 attggttaagcatccaaaataagtaagtttttatttaaaaagttgtgtaatcattacttgatcaaagagtaacatcttatatttcaaagacaaaacttct 16685828  T
Q  129 atttatagtttccttaaccaatgccctgag 158  Q
    |||  ||| |||||||||||||||||||||    
T  16685829 attagtagattccttaaccaatgccctgag 16685858  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 31 - 158
Target Start/End: Original strand, 17659965 - 17660094
Alignment:
Q  31 attggttaagcaaccaaaacaattcaatttttata-aaaaagttgtgtaattattatttaatcaaa-agtcaaaatttatattttcaagataaattttct 128  Q
    |||||||||||| |||||| || | | |||||||  ||||||||||||||| |||| || |||||| ||| | |  ||||||||  |||| |||  ||||    
T  17659965 attggttaagcatccaaaataagtaagtttttatttaaaaagttgtgtaatcattacttgatcaaagagtaacatcttatatttcaaagacaaaacttct 17660064  T
Q  129 atttatagtttccttaaccaatgccctgag 158  Q
    |||  ||| |||||||||||||||||||||    
T  17660065 attagtagattccttaaccaatgccctgag 17660094  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 58 - 147
Target Start/End: Complemental strand, 45907122 - 45907033
Alignment:
Q  58 tttttataaaaaagttgtgtaattattatttaatcaaaagtcaaaatttatattttcaagataaattttctatttatagtttccttaacc 147  Q
    ||||||| |||||||  ||||||||||| || || |||||| | | ||||||||| ||||| |||   ||||||||||| ||||||||||    
T  45907122 tttttattaaaaagtaatgtaattattacttgataaaaagtgacagtttatatttacaagacaaaaaatctatttatagattccttaacc 45907033  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 65 - 181
Target Start/End: Original strand, 1359707 - 1359823
Alignment:
Q  65 aaaaaagttgtgtaattattatttaatcaaaagtcaaaatttatattttcaagataaattttctatttatagtttccttaaccaatgccctgagagcact 164  Q
    ||||||||  ||||||  ||||||| |||||||| | |  |||| ||| ||||| ||| |||||||| || | |||||||||||||||||    ||||||    
T  1359707 aaaaaagtaatgtaatcgttatttagtcaaaagtgagaccttatgtttccaagacaaaatttctattcatggattccttaaccaatgcccaagaagcact 1359806  T
Q  165 ggttagtaagaccctta 181  Q
    |||||  ||||||||||    
T  1359807 ggttaacaagaccctta 1359823  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 105 - 157
Target Start/End: Complemental strand, 34993139 - 34993087
Alignment:
Q  105 ttatattttcaagataaattttctatttatagtttccttaaccaatgccctga 157  Q
    |||||||||||||| ||| ||| ||||| ||| ||||||||||| ||||||||    
T  34993139 ttatattttcaagacaaaatttatatttgtagattccttaaccattgccctga 34993087  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 66 - 98
Target Start/End: Complemental strand, 34993208 - 34993176
Alignment:
Q  66 aaaaagttgtgtaattattatttaatcaaaagt 98  Q
    ||||||||||||||||||||||| |||||||||    
T  34993208 aaaaagttgtgtaattattattttatcaaaagt 34993176  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 80; Significance: 1e-37; HSPs: 36)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 28 - 179
Target Start/End: Original strand, 6102824 - 6102974
Alignment:
Q  28 ggcattggttaagcaaccaaaacaattcaatttttataaaaaagttgtgtaattattatttaatcaaaagtcaaaatttatattttcaagataaattttc 127  Q
    |||||||||||||||||||||| || | | ||||||| |||| ||  ||||||||||| ||||||||||||||||| ||||||||| |||| ||||||||    
T  6102824 ggcattggttaagcaaccaaaataagtaactttttattaaaa-gtattgtaattattacttaatcaaaagtcaaaacttatattttgaagacaaattttc 6102922  T
Q  128 tatttatagtttccttaaccaatgccctgagagcactggttagtaagaccct 179  Q
    ||||||||| ||||||||||| |||||| || ||||||||||| ||||||||    
T  6102923 tatttatagattccttaaccattgccctaagtgcactggttagcaagaccct 6102974  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 26 - 140
Target Start/End: Original strand, 16802021 - 16802134
Alignment:
Q  26 agggcattggttaagcaaccaaaacaattcaatttttataaaaaagttgtgtaattattatttaatcaaaagtcaaaatttatattttcaagataaattt 125  Q
    |||| |||||||||||||||||||||| | | |||||||||||| ||  ||||||||||| |||||||||||||||||||||||||||||||| ||||||    
T  16802021 agggtattggttaagcaaccaaaacaaataactttttataaaaa-gtaatgtaattattacttaatcaaaagtcaaaatttatattttcaagacaaattt 16802119  T
Q  126 tctatttatagtttc 140  Q
    |||||||||||||||    
T  16802120 tctatttatagtttc 16802134  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 75 - 180
Target Start/End: Complemental strand, 12036379 - 12036274
Alignment:
Q  75 tgtaattattatttaatcaaaagtcaaaatttatattttcaagataaattttctatttatagtttccttaaccaatgccctgagagcactggttagtaag 174  Q
    ||||||||||| ||||||||||||||||| |||||||||||||| ||||||||||||||||| ||||||||| | | ||||||| | ||||||||| |||    
T  12036379 tgtaattattacttaatcaaaagtcaaaacttatattttcaagacaaattttctatttataggttccttaactatttccctgagggtactggttagcaag 12036280  T
Q  175 accctt 180  Q
    ||||||    
T  12036279 accctt 12036274  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 30 - 169
Target Start/End: Original strand, 3600108 - 3600246
Alignment:
Q  30 cattggttaagcaaccaaaacaattcaatttttataaaaaagttgtgtaattattatttaatcaaaagtcaaaatttatattttcaagataaattttcta 129  Q
    ||||| |||||||||||||| ||   | |||||||||||| ||  ||||||||||| ||||| |||| |||||| |||||||||||||| |||| || ||    
T  3600108 cattgattaagcaaccaaaataaaaaactttttataaaaa-gtaatgtaattattacttaattaaaattcaaaacttatattttcaagacaaatatttta 3600206  T
Q  130 tttatagtttccttaaccaatgccctgagagcactggtta 169  Q
    |||||||||| |||||||| |||||||||||||| |||||    
T  3600207 tttatagttttcttaaccattgccctgagagcaccggtta 3600246  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 28 - 148
Target Start/End: Original strand, 6830263 - 6830383
Alignment:
Q  28 ggcattggttaagcaaccaaaacaattcaatttttataa-aaaagttgtgtaattattatttaatcaaaagtcaaaatttatattttcaagataaatttt 126  Q
    ||||||||||||||||||||||||| | ||||||| ||  |||||| |||||||||||||| |||||||  ||| || |||||||||||||| | |||||    
T  6830263 ggcattggttaagcaaccaaaacaagt-aatttttttattaaaagtagtgtaattattattgaatcaaatttcagaacttatattttcaagacacatttt 6830361  T
Q  127 ctatttatagtttccttaacca 148  Q
    |||||||||  |||||||||||    
T  6830362 ctatttataaattccttaacca 6830383  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 31 - 148
Target Start/End: Complemental strand, 15139281 - 15139168
Alignment:
Q  31 attggttaagcaaccaaaacaattcaatttttataaaaaagttgtgtaattattatttaatcaaaagtcaaaatttatattttcaagataaattttctat 130  Q
    ||||||||||||| ||||| || | | |||||||||||| || ||||||||| |   ||||||||| |||||  |||||||||||||| ||||||| |||    
T  15139281 attggttaagcaatcaaaataagtaattttttataaaaa-gtagtgtaattact---taatcaaaaatcaaatcttatattttcaagacaaattttttat 15139186  T
Q  131 ttatagtttccttaacca 148  Q
    ||||||||||||||||||    
T  15139185 ttatagtttccttaacca 15139168  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 29 - 155
Target Start/End: Original strand, 29552322 - 29552447
Alignment:
Q  29 gcattggttaagcaaccaaaacaattcaatt-tttataaaaaagttgtgtaattattatttaatcaaaagtcaaaatttatattttcaagataaattttc 127  Q
    ||||||||||| ||| |||||||| | | || ||||||||| | | ||||||| |||| ||||||||| |||||||||||||||| | | | ||||||||    
T  29552322 gcattggttaaacaatcaaaacaagtaatttgtttataaaata-tagtgtaat-attacttaatcaaatgtcaaaatttatatttacgaaacaaattttc 29552419  T
Q  128 tatttatagtttccttaaccaatgccct 155  Q
    ||||||||||||||||||||| ||||||    
T  29552420 tatttatagtttccttaaccattgccct 29552447  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 26 - 139
Target Start/End: Complemental strand, 39034571 - 39034458
Alignment:
Q  26 agggcattggttaagcaaccaaaacaattcaattttt---ataaaaaagttgtgtaattattatttaatcaaaagtcaaaatttatattttcaagataaa 122  Q
    |||||||||||| |||||||||||||||  |||||||   |||||| | | |||||||||||| ||||||||||||||||| ||||||||||||||   |    
T  39034571 agggcattggtttagcaaccaaaacaat--aattttttttataaaata-tagtgtaattattacttaatcaaaagtcaaaacttatattttcaagaccta 39034475  T
Q  123 ttttctatttatagttt 139  Q
    ||||||||| |||||||    
T  39034474 ttttctattaatagttt 39034458  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 25 - 170
Target Start/End: Complemental strand, 14152593 - 14152448
Alignment:
Q  25 aagggcattggttaagcaaccaaaacaattcaatttttataaaaaagttgtgtaattattatttaatcaaaagtcaaaatttatattttcaagataaatt 124  Q
    ||||| |||||||||| ||||||||||| | | |||||   ||||||| |||||||||||| || || |||| || ||| || || ||| ||||||||||    
T  14152593 aagggtattggttaagtaaccaaaacaagtaacttttttataaaaagtggtgtaattattacttcataaaaaatctaaacttttaattttaagataaatt 14152494  T
Q  125 ttctatttatagtttccttaaccaatgccctgagagcactggttag 170  Q
    ||||||||||| ||| |||||||| || | ||||| ||| ||||||    
T  14152493 ttctatttataattttcttaaccattgtcatgagatcaccggttag 14152448  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 58 - 170
Target Start/End: Original strand, 11815936 - 11816048
Alignment:
Q  58 tttttataaaaaagttgtgtaattattatttaatcaaaagtcaaaatttatattttcaagataaattttctatttatagtttccttaaccaatgccctga 157  Q
    ||||||| |||||  |||||||| |||| || ||||||||| | |  |||||||||||||| ||| ||||||||| ||| ||| ||||||| || |||||    
T  11815936 tttttatgaaaaatatgtgtaatcattactttatcaaaagtaacatcttatattttcaagacaaaatttctatttttagattcattaaccattgtcctga 11816035  T
Q  158 gagcactggttag 170  Q
    |||||||||||||    
T  11816036 gagcactggttag 11816048  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 25 - 180
Target Start/End: Original strand, 22293976 - 22294130
Alignment:
Q  25 aagggcattggttaagcaaccaaaacaattcaatttttataaaaaagttgtgtaattattatttaatcaaaagtcaaaat-ttatattttcaagataaat 123  Q
    ||||| ||||||||| ||  |||||||| | | ||||||| ||||||||||| ||| ||||||| |||||||  ||| || |||||||| ||||| |||     
T  22293976 aagggtattggttaaacattcaaaacaagtaagtttttatgaaaaagttgtgcaataattatttgatcaaaa-ccaatatcttatatttccaagacaaaa 22294074  T
Q  124 tttctatttatagtttccttaaccaatgccctgagagcactggttagtaagaccctt 180  Q
    ||||||||| ||| ||||||||||| ||| ||||| |||||| |||| |||||||||    
T  22294075 tttctatttgtagattccttaaccattgctctgag-gcactgtttagcaagaccctt 22294130  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 78 - 145
Target Start/End: Original strand, 2033499 - 2033566
Alignment:
Q  78 aattattatttaatcaaaagtcaaaatttatattttcaagataaattttctatttatagtttccttaa 145  Q
    |||||||| ||||||||||||||||| ||||||||| ||  |||||||| ||||||||||||||||||    
T  2033499 aattattacttaatcaaaagtcaaaacttatatttttaacctaaattttttatttatagtttccttaa 2033566  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 28 - 150
Target Start/End: Complemental strand, 30840715 - 30840594
Alignment:
Q  28 ggcattggttaagcaaccaaaacaattcaatttttataaaaaagttgtgtaattattatttaatcaaaagtcaaaatttatattttcaagataaattttc 127  Q
    ||||||| ||||||| ||||||||| | | |||| | |||||||||||||||| |||| || ||||||||| | |  |||||||||||||| ||||||||    
T  30840715 ggcattgattaagcatccaaaacaagtaagttttca-aaaaaagttgtgtaatcattacttgatcaaaagtaacatcttatattttcaagacaaattttc 30840617  T
Q  128 tatttatagtttccttaaccaat 150  Q
    | ||  ||| |||||||||||||    
T  30840616 tgttagtagattccttaaccaat 30840594  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 25 - 144
Target Start/End: Original strand, 27544581 - 27544700
Alignment:
Q  25 aagggcattggttaagcaaccaaaacaattcaatttttataaaaaagttgtgtaattattatttaatcaaaagtcaaaatttatattttcaagataaatt 124  Q
    ||||||||| ||||| || ||||||||| | |||||| || ||||||||||||||| ||||  | || |||| | | |  |||||||||||||||||| |    
T  27544581 aagggcattagttaaacatccaaaacaagtaaattttcatgaaaaagttgtgtaatcattacatgataaaaaataacatcttatattttcaagataaaat 27544680  T
Q  125 ttctatttatagtttcctta 144  Q
    |||||||| ||| |||||||    
T  27544681 ttctatttgtagattcctta 27544700  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 31 - 116
Target Start/End: Complemental strand, 28511265 - 28511179
Alignment:
Q  31 attggttaagcaaccaaaacaattcaatttttataaaaaa-gttgtgtaattattatttaatcaaaagtcaaaatttatattttcaa 116  Q
    |||||||||||||||||||||  | | ||||||||||||| || |||||||||||| || ||||||||| |||| ||| ||||||||    
T  28511265 attggttaagcaaccaaaacatgtaagtttttataaaaaaagtagtgtaattattaattcatcaaaagtaaaaacttacattttcaa 28511179  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 27 - 155
Target Start/End: Complemental strand, 2611267 - 2611139
Alignment:
Q  27 gggcattggttaagcaaccaaaacaattcaatttttataaaaaagttgtgtaattattatttaatcaaaagtcaaaatttatattttcaagata-aattt 125  Q
    |||||||||||||||| |||||  || | | ||||||| |||||||  ||||||||||| ||||| |||||| | |  |||||||| ||||| | || ||    
T  2611267 gggcattggttaagca-ccaaatgaagtaagtttttattaaaaagtaatgtaattattacttaataaaaagtgacagcttatatttccaagacataaatt 2611169  T
Q  126 tctatttatagtttccttaaccaatgccct 155  Q
    ||||||||||| ||||||||||| ||||||    
T  2611168 tctatttatagattccttaaccagtgccct 2611139  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 77 - 158
Target Start/End: Original strand, 9114930 - 9115011
Alignment:
Q  77 taattattatttaatcaaaagtcaaaatttatattttcaagataaattttctatttatagtttccttaaccaatgccctgag 158  Q
    ||||||||| ||||| |||| | |||||||||||||||||||||||||||||  ||||| ||| ||||| || || ||||||    
T  9114930 taattattacttaataaaaaattaaaatttatattttcaagataaattttcttcttataattttcttaatcattgtcctgag 9115011  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 105 - 178
Target Start/End: Original strand, 34346954 - 34347027
Alignment:
Q  105 ttatattttcaagataaattttctatttatagtttccttaaccaatgccctgagagcactggttagtaagaccc 178  Q
    |||||||||||||| ||||||| ||||| ||| ||||||||||| |||  ||||  ||||||||||||||||||    
T  34346954 ttatattttcaagacaaattttttatttgtagattccttaaccattgctatgaggacactggttagtaagaccc 34347027  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 63 - 123
Target Start/End: Original strand, 5002917 - 5002977
Alignment:
Q  63 ataaaaaagttgtgtaattattatttaatcaaaagtcaaaatttatattttcaagataaat 123  Q
    |||||||||||||||| |||||| |||||||||||| |||| || ||||||||||| ||||    
T  5002917 ataaaaaagttgtgtagttattacttaatcaaaagttaaaacttttattttcaagacaaat 5002977  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 122 - 186
Target Start/End: Original strand, 5471314 - 5471378
Alignment:
Q  122 attttctatttatagtttccttaaccaatgccctgagagcactggttagtaagacccttaaataa 186  Q
    ||||| |||||||||||| |||||||| ||||||||| |||| |||||| ||||||| |||||||    
T  5471314 attttttatttatagttttcttaaccattgccctgagggcaccggttagcaagacccataaataa 5471378  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 92 - 155
Target Start/End: Original strand, 33085336 - 33085399
Alignment:
Q  92 caaaagtcaaaatttatattttcaagataaattttctatttatagtttccttaaccaatgccct 155  Q
    ||||||| ||||||||||||||||||| ||| |||||| | || | ||||||||||||||||||    
T  33085336 caaaagtaaaaatttatattttcaagacaaagtttctactaatggattccttaaccaatgccct 33085399  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 74 - 145
Target Start/End: Original strand, 35290678 - 35290749
Alignment:
Q  74 gtgtaattattatttaatcaaaagtcaaaatttatattttcaagataaattttctatttatagtttccttaa 145  Q
    |||||| ||||| |||||||||||||||||  |||||||| |||| |||||||||| |||||| || |||||    
T  35290678 gtgtaaatattacttaatcaaaagtcaaaacatatatttttaagacaaattttctaattatagattacttaa 35290749  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 58 - 169
Target Start/End: Complemental strand, 8151885 - 8151772
Alignment:
Q  58 tttttataaaaaagttgtgtaattattat--ttaatcaaaagtcaaaatttatattttcaagataaattttctatttatagtttccttaaccaatgccct 155  Q
    |||| ||||||||||| | ||||||||||  || || |||||| | |  |||||||||||| | ||| |||||| |||||  |||||||||||  |||||    
T  8151885 ttttcataaaaaagttatataattattatacttgattaaaagtaacatcttatattttcaaaacaaaatttctacttataaattccttaaccatggccct 8151786  T
Q  156 gagagcactggtta 169  Q
    ||||||||||||||    
T  8151785 gagagcactggtta 8151772  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 66 - 175
Target Start/End: Complemental strand, 20527087 - 20526977
Alignment:
Q  66 aaaaagttgtgtaattatta-tttaatcaaaagtcaaaatttatattttcaagataaattttctatttatagtttccttaaccaatgccctgagagcact 164  Q
    |||||||  ||||||||||| |||||| |||| |||||| || |||||||| || ||||| ||||||||||| |||| |||| | | || |||| |||||    
T  20527087 aaaaagtgatgtaattattactttaattaaaaatcaaaacttctattttcatgacaaattatctatttatagattccataactattaccttgagggcact 20526988  T
Q  165 ggttagtaaga 175  Q
    |||||| ||||    
T  20526987 ggttagcaaga 20526977  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 58 - 148
Target Start/End: Original strand, 36482076 - 36482166
Alignment:
Q  58 tttttataaaaaagttgtgtaattattatttaatcaaaagtcaaaatttatattttcaagataaattttctatttatagtttccttaacca 148  Q
    |||| |||||||||||||||||  ||||||| ||||||||| | |  |||||||||||| | ||| ||||||||| ||| ||| |||||||    
T  36482076 ttttcataaaaaagttgtgtaaacattatttgatcaaaagtaacatcttatattttcaaaacaaaatttctatttgtagattcattaacca 36482166  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 58 - 126
Target Start/End: Original strand, 5471104 - 5471171
Alignment:
Q  58 tttttataaaaaagttgtgtaattattatttaatcaaaagtcaaaatttatattttcaagataaatttt 126  Q
    ||||||||||||| |  ||| |||||||||||||||||||||||||  ||||||| ||||| |||||||    
T  5471104 tttttataaaaaa-taatgttattattatttaatcaaaagtcaaaacatatatttccaagacaaatttt 5471171  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 30 - 182
Target Start/End: Original strand, 14863334 - 14863485
Alignment:
Q  30 cattggttaagcaaccaaaacaattcaatttttataaaaaagttgtgtaattattatttaatcaaaagtcaaaatttatattttcaagataaattttcta 129  Q
    ||||||||||||| |||||| || | | ||||||| ||||| |  ||||||||||| || || |||||| | | ||||||||||||||| | |  || ||    
T  14863334 cattggttaagca-ccaaaaaaagtaagtttttattaaaaattaatgtaattattacttgataaaaagtgacagtttatattttcaagacataaattata 14863432  T
Q  130 tttatagtttccttaaccaatgccctgagagcactggttagtaagacccttaa 182  Q
    ||||||| ||| ||||||| || || ||  ||||||||||  |||||||||||    
T  14863433 tttatagattctttaaccagtgtcccgaaggcactggttaacaagacccttaa 14863485  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 65 - 148
Target Start/End: Original strand, 4350891 - 4350973
Alignment:
Q  65 aaaaaagttgtgtaattattatttaatcaaaagtcaaaatttatattttcaagataaattttctatttatagtttccttaacca 148  Q
    |||||||||||||||| ||||| || | |||| | | ||||||||||||||||||||| ||| | ||||||  |||||||||||    
T  4350891 aaaaaagttgtgtaatcattatata-taaaaaataataatttatattttcaagataaaatttttgtttataaattccttaacca 4350973  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 92 - 179
Target Start/End: Original strand, 35626647 - 35626734
Alignment:
Q  92 caaaagtcaaaatttatattttcaagataaattttctatttatagtttccttaaccaatgccctgagagcactggttagtaagaccct 179  Q
    ||||||| |||| |||||||||||| | ||| |||||||| || | ||||||||||| || ||| || ||||| ||||| ||||||||    
T  35626647 caaaagtaaaaacttatattttcaaaacaaaatttctattaatggattccttaaccattgtccttagggcactagttagcaagaccct 35626734  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 108 - 178
Target Start/End: Original strand, 7736376 - 7736446
Alignment:
Q  108 tattttcaagataaattttctatttatagtttccttaaccaatgccctgagagcactggttagtaagaccc 178  Q
    ||||||||||||||| |||||||| || |  || ||||||| |||||| || ||||||||||| |||||||    
T  7736376 tattttcaagataaagtttctattaatgggatctttaaccattgcccttagggcactggttagcaagaccc 7736446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 99 - 145
Target Start/End: Complemental strand, 35349441 - 35349395
Alignment:
Q  99 caaaatttatattttcaagataaattttctatttatagtttccttaa 145  Q
    ||||| |||||||||||| ||||||||||||||||||| ||| ||||    
T  35349441 caaaacttatattttcaaaataaattttctatttatagattctttaa 35349395  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 92 - 153
Target Start/End: Complemental strand, 12487158 - 12487097
Alignment:
Q  92 caaaagtcaaaatttatattttcaagataaattttctatttatagtttccttaaccaatgcc 153  Q
    ||||||| ||||||| ||||||||||| ||| |||||| | |||| ||||||||||| ||||    
T  12487158 caaaagtaaaaatttgtattttcaagacaaaatttctactaatagattccttaaccattgcc 12487097  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 138 - 187
Target Start/End: Original strand, 25017412 - 25017461
Alignment:
Q  138 ttccttaaccaatgccctgagagcactggttagtaagacccttaaataaa 187  Q
    ||||||||||| |||  |||||||| ||||||| ||||||||||||||||    
T  25017412 ttccttaaccattgctttgagagcaatggttagcaagacccttaaataaa 25017461  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 58 - 98
Target Start/End: Complemental strand, 14044768 - 14044728
Alignment:
Q  58 tttttataaaaaagttgtgtaattattatttaatcaaaagt 98  Q
    ||||||||||||||||||||||| |||| || |||||||||    
T  14044768 tttttataaaaaagttgtgtaataattacttgatcaaaagt 14044728  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 66 - 170
Target Start/End: Complemental strand, 30293903 - 30293799
Alignment:
Q  66 aaaaagttgtgtaattattatttaatcaaaagtcaaaatttatattttcaagataaattttctatttatagtttccttaaccaatgccctgagagcactg 165  Q
    ||||| || |||||| |||| || ||||||||| | |  ||||||||| |||| ||| ||||||||| ||| ||| ||||||||| | || || ||||||    
T  30293903 aaaaaattatgtaatcattacttgatcaaaagtaacatcttatatttttaagacaaaatttctatttgtagattctttaaccaatactctaagggcactg 30293804  T
Q  166 gttag 170  Q
    |||||    
T  30293803 gttag 30293799  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 91 - 135
Target Start/End: Complemental strand, 39059756 - 39059712
Alignment:
Q  91 tcaaaagtcaaaatttatattttcaagataaattttctatttata 135  Q
    |||||||| | |||||||||||| |||||||| ||||||||||||    
T  39059756 tcaaaagtaacaatttatattttaaagataaaatttctatttata 39059712  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 74; Significance: 4e-34; HSPs: 33)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 74; E-Value: 4e-34
Query Start/End: Original strand, 57 - 178
Target Start/End: Original strand, 31160751 - 31160871
Alignment:
Q  57 atttttataaaaaagttgtgtaattattatttaatcaaaagtcaaaatttatattttcaagataaattttctatttatagtttccttaaccaatgccctg 156  Q
    ||||||||||||| ||  ||||||||||| ||||||||||||||||||||||||||| |||| |||||||||||||||| |||||||||||| ||||| |    
T  31160751 atttttataaaaa-gtgatgtaattattacttaatcaaaagtcaaaatttatatttttaagacaaattttctatttatattttccttaaccattgcccag 31160849  T
Q  157 agagcactggttagtaagaccc 178  Q
    || |||||||||||| ||||||    
T  31160850 agggcactggttagttagaccc 31160871  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 62; E-Value: 6e-27
Query Start/End: Original strand, 33 - 170
Target Start/End: Complemental strand, 8001860 - 8001723
Alignment:
Q  33 tggttaagcaaccaaaacaattcaatttttataaaaaagttgtgtaattattatttaatcaaaagtcaaaatttatattttcaagataaattttctattt 132  Q
    |||||||||| | ||||||| | |||||| ||  |||||||||||||| |||| || ||||||||| | |  |||||||||||||||||| |||||||||    
T  8001860 tggttaagcatctaaaacaagtaaattttcatgtaaaagttgtgtaatcattactttatcaaaagtaacatcttatattttcaagataaaatttctattt 8001761  T
Q  133 atagtttccttaaccaatgccctgagagcactggttag 170  Q
     ||| ||||||||||| ||||||||| |||||||||||    
T  8001760 ctagattccttaaccattgccctgagggcactggttag 8001723  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 66 - 178
Target Start/End: Original strand, 27531 - 27643
Alignment:
Q  66 aaaaagttgtgtaattattatttaatcaaaagtcaaaatttatattttcaagataaattttctatttatagtttccttaaccaatgccctgagagcactg 165  Q
    ||||||| |||||||||||| ||||||||||||||||| ||||||||| |||| ||||||| ||||||||||| |||||| || || | |||| ||||||    
T  27531 aaaaagtagtgtaattattacttaatcaaaagtcaaaacttatattttaaagacaaattttttatttatagttcccttaatcattgtcgtgagggcactg 27630  T
Q  166 gttagtaagaccc 178  Q
    ||||| |||||||    
T  27631 gttagcaagaccc 27643  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 30 - 170
Target Start/End: Complemental strand, 34382748 - 34382609
Alignment:
Q  30 cattggttaagcaaccaaaacaattcaatttttataaaaaagttgtgtaattattatttaatcaaaagtcaaaatttatattttcaagataaattttcta 129  Q
    |||||||| | ||| |||||||| | | |||||||||||| |||||||||||||| ||||||||||| | |||| ||||||||| |||||||||||| ||    
T  34382748 cattggtttaacaatcaaaacaagtaactttttataaaaa-gttgtgtaattattgtttaatcaaaaattaaaacttatatttttaagataaatttttta 34382650  T
Q  130 tttatagtttccttaaccaatgccctgagagcactggttag 170  Q
    |||||||||| ||||| || |||| | || |||||||||||    
T  34382649 tttatagttttcttaatcattgccttaagggcactggttag 34382609  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 31 - 177
Target Start/End: Complemental strand, 13969214 - 13969068
Alignment:
Q  31 attggttaagcaaccaaaacaattcaatttttataaaaaagttgtgtaattattatttaatcaaaagtcaaaatttatattttcaagataaattttctat 130  Q
    |||||||||||||||||||||| | | ||||||| ||||| ||||||||| |||| ||||| |||||| | | ||||||||||||||| ||| |||||||    
T  13969214 attggttaagcaaccaaaacaagtaagtttttatgaaaaaattgtgtaataattacttaattaaaagtaacattttatattttcaagacaaaatttctat 13969115  T
Q  131 ttatagtttccttaaccaatgccctgagagcactggttagtaagacc 177  Q
    || ||| ||||||||| | || || ||| ||||| ||||| ||||||    
T  13969114 ttgtagattccttaactattgtcccgagggcactagttagcaagacc 13969068  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 25 - 179
Target Start/End: Complemental strand, 46295992 - 46295838
Alignment:
Q  25 aagggcattggttaagcaaccaaaacaattcaatttttataaaaaagttgtgtaattattatttaatcaaaagtcaaaatttatattttcaagataaatt 124  Q
    ||||| ||| |||||||| ||||||||| | | ||||||| |||||||||||| || |||| || ||||||||| | | ||||||||||||||||||| |    
T  46295992 aagggtatttgttaagcatccaaaacaaataagtttttatgaaaaagttgtgtcatgattacttgatcaaaagtaacattttatattttcaagataaaat 46295893  T
Q  125 ttctatttatagtttccttaaccaatgccctgagagcactggttagtaagaccct 179  Q
    || ||||| ||| ||||||||||| ||||| ||  | ||||||||| ||||||||    
T  46295892 ttttatttgtagattccttaaccattgccccgaaggtactggttagcaagaccct 46295838  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 77 - 169
Target Start/End: Complemental strand, 11065936 - 11065844
Alignment:
Q  77 taattattatttaatcaaaagtcaaaatttatattttcaagataaattttctatttatagtttccttaaccaatgccctgagagcactggtta 169  Q
    ||||||||| ||||||||||||||||| |||||||||||||| ||||||| || |||||||||||||||||| |||| |||| |||| |||||    
T  11065936 taattattacttaatcaaaagtcaaaacttatattttcaagagaaattttataattatagtttccttaaccattgccttgagggcaccggtta 11065844  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 58 - 154
Target Start/End: Original strand, 39283695 - 39283791
Alignment:
Q  58 tttttataaaaaagttgtgtaattattatttaatcaaaagtcaaaatttatattttcaagataaattttctatttatagtttccttaaccaatgccc 154  Q
    ||||| || |||||| ||||  |||||| |||||||||| |||||| ||||||||| |||||||||||||||||||||||||| ||||||| |||||    
T  39283695 tttttttataaaagtagtgtctttattacttaatcaaaaatcaaaacttatatttttaagataaattttctatttatagtttcattaaccattgccc 39283791  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 66 - 149
Target Start/End: Original strand, 27908952 - 27909034
Alignment:
Q  66 aaaaagttgtgtaattattatttaatcaaaagtcaaaatttatattttcaagataaattttctatttatagtttccttaaccaa 149  Q
    |||||||||||||||||||| ||||||||||||||||||||||||||||||  |   || | ||||||||||||||||||||||    
T  27908952 aaaaagttgtgtaattattacttaatcaaaagtcaaaatttatattttcaa-tttttttatttatttatagtttccttaaccaa 27909034  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 26 - 178
Target Start/End: Original strand, 26829485 - 26829637
Alignment:
Q  26 agggcattggttaagcaaccaaaacaattcaatttttataaaaaagttgtgtaattattatttaatcaaaagtcaaaatttatattttcaagataaattt 125  Q
    |||||| |||||||||| | |||| || | |||||| || ||||||||||||||| |||| || ||||||||| | |  |||||||| ||||| ||| ||    
T  26829485 agggcaatggttaagcatctaaaataagtaaattttcatgaaaaagttgtgtaatcattactttatcaaaagtaacatcttatatttccaagacaaaatt 26829584  T
Q  126 tctatttatagtttccttaaccaatgccctgagagcactggttagtaagaccc 178  Q
    |||| || ||  || |||||||| |||||| || ||||| ||||| |||||||    
T  26829585 tctaattgtaaatttcttaaccattgcccttagggcacttgttagcaagaccc 26829637  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 66 - 130
Target Start/End: Complemental strand, 28490729 - 28490665
Alignment:
Q  66 aaaaagttgtgtaattattatttaatcaaaagtcaaaatttatattttcaagataaattttctat 130  Q
    |||||||||||||||||||| |||| ||||| |||||| ||||||||| |||| |||||||||||    
T  28490729 aaaaagttgtgtaattattacttaagcaaaaatcaaaacttatatttttaagacaaattttctat 28490665  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 58 - 178
Target Start/End: Original strand, 35876774 - 35876894
Alignment:
Q  58 tttttataaaaaagttgtgtaattattatttaatcaaaagtcaaaatttatattttcaagataaattttctatttatagtttccttaaccaatgccctga 157  Q
    ||||||||||||| | |||| ||| ||  |||||||||||| |||| ||||||||| |||| ||||||| ||||| || |||  |||| || ||||||||    
T  35876774 tttttataaaaaaatagtgttattgttccttaatcaaaagttaaaacttatatttttaagacaaattttttatttctaatttttttaatcattgccctga 35876873  T
Q  158 gagcactggttagtaagaccc 178  Q
     ||||| |||||| |||||||    
T  35876874 aagcaccggttagcaagaccc 35876894  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 66 - 146
Target Start/End: Original strand, 48375274 - 48375354
Alignment:
Q  66 aaaaagttgtgtaattattatttaatcaaaagtcaaaatttatattttcaagataaattttctatttatagtttccttaac 146  Q
    ||||||| |||||||||| | ||||||||| ||||||| |||||||||| ||| || |||| |||||||||||| ||||||    
T  48375274 aaaaagtggtgtaattatcacttaatcaaatgtcaaaacttatattttctagacaatttttatatttatagttttcttaac 48375354  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 74 - 142
Target Start/End: Original strand, 41936182 - 41936254
Alignment:
Q  74 gtgtaattatta-tttaatcaaaagtcaaaat---ttatattttcaagataaattttctatttatagtttcct 142  Q
    |||||||||||| ||||||||||||||||||    |||||||||||||| ||||||| |||||||||||||||    
T  41936182 gtgtaattattactttaatcaaaagtcaaaacaacttatattttcaagacaaattttttatttatagtttcct 41936254  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 25 - 145
Target Start/End: Original strand, 32187046 - 32187165
Alignment:
Q  25 aagggcattggttaagcaaccaaaacaattcaatttttataaaaaagttgtgtaattattatttaatcaaaagtcaaaatttatattttcaagataaatt 124  Q
    |||| ||||||||||| |  |||||||| | |||||| ||  |||||||||| ||||||||| | ||||||||| | |  |||||||||||||| ||| |    
T  32187046 aaggacattggttaagaattcaaaacaagtaaatttt-attgaaaagttgtgcaattattatctgatcaaaagtaacatcttatattttcaagacaaaat 32187144  T
Q  125 ttctatttatagtttccttaa 145  Q
    |||||||||||  ||||||||    
T  32187145 ttctatttataaattccttaa 32187165  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 27 - 98
Target Start/End: Original strand, 38597474 - 38597545
Alignment:
Q  27 gggcattggttaagcaaccaaaacaattcaatttttataaaaaagttgtgtaattattatttaatcaaaagt 98  Q
    |||||||||||||| | ||||||||| | | |||| ||||||||||||| |||| |||| ||||||||||||    
T  38597474 gggcattggttaagtatccaaaacaagtaagttttaataaaaaagttgtctaatcattacttaatcaaaagt 38597545  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 30 - 87
Target Start/End: Original strand, 3529108 - 3529165
Alignment:
Q  30 cattggttaagcaaccaaaacaattcaatttttataaaaaagttgtgtaattattatt 87  Q
    ||||||||||||| |||||| || | |||||| |||||||| ||||||||||||||||    
T  3529108 cattggttaagcatccaaaataagtaaattttcataaaaaaattgtgtaattattatt 3529165  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 105 - 150
Target Start/End: Original strand, 3529443 - 3529488
Alignment:
Q  105 ttatattttcaagataaattttctatttatagtttccttaaccaat 150  Q
    |||||||||||||||||| ||||||||||||  |||||||||||||    
T  3529443 ttatattttcaagataaaatttctatttatatattccttaaccaat 3529488  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 88 - 129
Target Start/End: Complemental strand, 13680692 - 13680651
Alignment:
Q  88 taatcaaaagtcaaaatttatattttcaagataaattttcta 129  Q
    |||||||||||||||| |||||||||||||||||| ||||||    
T  13680692 taatcaaaagtcaaaacttatattttcaagataaaatttcta 13680651  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 25 - 98
Target Start/End: Complemental strand, 34347631 - 34347558
Alignment:
Q  25 aagggcattggttaagcaaccaaaacaattcaatttttataaaaaagttgtgtaattattatttaatcaaaagt 98  Q
    ||||||| || ||||||| ||||||||| | ||| ||||| ||||||||||||||| |||| || |||||||||    
T  34347631 aagggcaatgattaagcatccaaaacaagtaaatctttatgaaaaagttgtgtaatcattactttatcaaaagt 34347558  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 29 - 129
Target Start/End: Original strand, 48502562 - 48502662
Alignment:
Q  29 gcattggttaagcaaccaaaacaattcaatttttataaaaaagttgtgtaattattatttaatcaaaagtcaaaatttatattttcaagataaattttct 128  Q
    |||||||||||| |||| ||| |  | || |||||| ||||||||||||||| |||| ||| |||||||| | |  |||||||||||||| || ||||||    
T  48502562 gcattggttaagtaacctaaagaggtaaaattttattaaaaagttgtgtaataattagttagtcaaaagtaacagcttatattttcaagacaatttttct 48502661  T
Q  129 a 129  Q
    |    
T  48502662 a 48502662  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 66 - 144
Target Start/End: Complemental strand, 10226542 - 10226464
Alignment:
Q  66 aaaaagttgtgtaattattatttaatcaaaagtcaaaatttatattttcaagataaattttctatttatagtttcctta 144  Q
    ||||||||||||||| |||| || ||||||| | | |  |||||||||||||| ||| ||||||||| ||| |||||||    
T  10226542 aaaaagttgtgtaatcattactttatcaaaattaacatcttatattttcaagacaaaatttctatttgtagattcctta 10226464  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 28 - 146
Target Start/End: Complemental strand, 31884577 - 31884460
Alignment:
Q  28 ggcattggttaagcaaccaaaacaattcaatttttataaaaaagttgtgtaattattatttaatcaaaagtcaaaatttatattttcaagataaattttc 127  Q
    ||||||||||||||| |||||| || | | ||||||| |||||||  |||||||||||||| || |||| |   | ||||||||| ||||||| |  |||    
T  31884577 ggcattggttaagca-ccaaaaaaagtaagtttttattaaaaagtaatgtaattattatttgataaaaaatgtcagtttatatttccaagatagaaattc 31884479  T
Q  128 tatttatagtttccttaac 146  Q
    ||||||||| || ||||||    
T  31884478 tatttatagatttcttaac 31884460  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 18 - 148
Target Start/End: Complemental strand, 33148259 - 33148129
Alignment:
Q  18 aatgctaaagggcattggttaagcaaccaaaacaattcaatttttataaaaaagttgtgtaattattatttaatcaaaagtcaaaatttatattttcaag 117  Q
    |||||| ||||||||| ||||| ||  |||||||| | | ||||||| ||||| ||||||||| |||| || |||||||||   |  ||||||||| |||    
T  33148259 aatgctcaagggcatttgttaaacattcaaaacaagtaagtttttatgaaaaaattgtgtaatcattacttgatcaaaagtagcatcttatatttttaag 33148160  T
Q  118 ataaattttctatttatagtttccttaacca 148  Q
    | ||| |||| |||| ||  |||||||||||    
T  33148159 acaaaatttcaatttgtatattccttaacca 33148129  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 105 - 155
Target Start/End: Original strand, 38169125 - 38169175
Alignment:
Q  105 ttatattttcaagataaattttctatttatagtttccttaaccaatgccct 155  Q
    ||||||||||||||||||  |||||| ||| | ||||||||||||||||||    
T  38169125 ttatattttcaagataaagcttctatatatggattccttaaccaatgccct 38169175  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 66 - 131
Target Start/End: Complemental strand, 1669980 - 1669915
Alignment:
Q  66 aaaaagttgtgtaattattatttaatcaaaagtcaaaatttatattttcaagataaattttctatt 131  Q
    |||||||| |||||||||| || ||  |||||| |||||||||||||| |||| ||||||| ||||    
T  1669980 aaaaagttttgtaattatttttcaaataaaagtaaaaatttatatttttaagacaaattttttatt 1669915  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 93 - 146
Target Start/End: Complemental strand, 2193321 - 2193268
Alignment:
Q  93 aaaagtcaaaatttatattttcaagataaattttctatttatagtttccttaac 146  Q
    |||||| || |||||||||||||||||||| |||||||| ||||  ||||||||    
T  2193321 aaaagtaaagatttatattttcaagataaagtttctattaatagaatccttaac 2193268  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 25 - 118
Target Start/End: Original strand, 8279728 - 8279821
Alignment:
Q  25 aagggcattggttaagcaaccaaaacaattcaatttttataaaaaagttgtgtaattattatttaatcaaaagtcaaaatttatattttcaaga 118  Q
    ||||||||||||||| |||| ||||||||| |  |||||  |||| ||||| |||| |||||||| ||||| || | |  ||||||||||||||    
T  8279728 aagggcattggttaatcaactaaaacaattaagattttaataaaacgttgtataatcattatttagtcaaatgtaacatcttatattttcaaga 8279821  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 74 - 111
Target Start/End: Complemental strand, 27160372 - 27160335
Alignment:
Q  74 gtgtaattattatttaatcaaaagtcaaaatttatatt 111  Q
    |||||||||||| ||||||||||||||||| |||||||    
T  27160372 gtgtaattattacttaatcaaaagtcaaaacttatatt 27160335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 105 - 150
Target Start/End: Original strand, 47496888 - 47496933
Alignment:
Q  105 ttatattttcaagataaattttctatttatagtttccttaaccaat 150  Q
    ||||||||| |||||||| ||||||||||||  |||||||||||||    
T  47496888 ttatatttttaagataaaatttctatttataaattccttaaccaat 47496933  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 79 - 136
Target Start/End: Complemental strand, 52762369 - 52762312
Alignment:
Q  79 attattatttaatcaaaagtcaaaatttatattttcaagataaattttctatttatag 136  Q
    ||||||| || ||||||||| ||||||||||||| ||||| ||| ||| |||||||||    
T  52762369 attattacttgatcaaaagttaaaatttatatttacaagacaaaatttttatttatag 52762312  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 27 - 151
Target Start/End: Original strand, 5069697 - 5069821
Alignment:
Q  27 gggcattggttaagcaaccaaaacaattcaatttttataaaaaagttgtgtaattattatttaatcaaaagtcaaaatttatattttcaagataaatttt 126  Q
    ||||||||||||| || ||||||||| | | |||| | || ||| |  |||||| ||| |||| |||||||| | |  |||||||| ||||| ||| |||    
T  5069697 gggcattggttaaacatccaaaacaagtaagttttcacaataaaatcatgtaatcattgtttagtcaaaagtaacaccttatatttccaagacaaaattt 5069796  T
Q  127 ctatttatagtttccttaaccaatg 151  Q
    |||||||| | || |||||||||||    
T  5069797 ctatttatgggtttcttaaccaatg 5069821  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 127 - 183
Target Start/End: Original strand, 44359779 - 44359835
Alignment:
Q  127 ctatttatagtttccttaaccaatgccctgagagcactggttagtaagacccttaaa 183  Q
    |||||| | ||||||||||||| ||||||||| ||||| ||||| ||||||| ||||    
T  44359779 ctatttttggtttccttaaccattgccctgagggcactagttagcaagacccataaa 44359835  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 72; Significance: 7e-33; HSPs: 31)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 72; E-Value: 7e-33
Query Start/End: Original strand, 31 - 186
Target Start/End: Complemental strand, 28709681 - 28709526
Alignment:
Q  31 attggttaagcaaccaaaacaattcaatttttataaaaaagttgtgtaattattatttaatcaaaagtcaaaatttatattttcaagataaattttctat 130  Q
    ||||||||||||  ||||| || | | ||| |||||||||||||| |||| ||||||| ||||||||| | | ||||||||||||||||||| |||||||    
T  28709681 attggttaagcattcaaaataagtaagtttctataaaaaagttgtataatcattatttgatcaaaagtaacattttatattttcaagataaaatttctat 28709582  T
Q  131 ttatagtttccttaaccaatgccctgagagcactggttagtaagacccttaaataa 186  Q
    |||||| ||| ||||||| ||||||||| ||||||| |||||| ||||| ||||||    
T  28709581 ttatagattctttaaccattgccctgagggcactgggtagtaaaaccctaaaataa 28709526  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 31 - 168
Target Start/End: Complemental strand, 34228372 - 34228236
Alignment:
Q  31 attggttaagcaaccaaaacaattcaatttttataaaaaagttgtgtaattattatttaatcaaaagtcaaaatttatattttcaagataaattttctat 130  Q
    |||||||||||||  ||||| | | | |||||||||||| ||  || |||||||||||||||||||||||||||||||||||| |||| ||||||| |||    
T  34228372 attggttaagcaattaaaacgagtaactttttataaaaa-gtgatgaaattattatttaatcaaaagtcaaaatttatatttttaagacaaattttttat 34228274  T
Q  131 ttatagtttccttaaccaatgccctgagagcactggtt 168  Q
    |||||||||||||||||| || ||||||  ||||||||    
T  34228273 ttatagtttccttaaccattgtcctgaggacactggtt 34228236  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 25 - 181
Target Start/End: Complemental strand, 635826 - 635670
Alignment:
Q  25 aagggcattggttaagcaaccaaaacaattcaatttttataaaaaagttgtgtaattattatttaatcaaaagtcaaaatttatattttcaagataaatt 124  Q
    |||||||||||||||||| ||||||||  | | |||||||  |||||||||||||| ||||||||||||||||| | |  |||| | ||||||| ||| |    
T  635826 aagggcattggttaagcatccaaaacatataagtttttattgaaaagttgtgtaatcattatttaatcaaaagtaacatcttatttattcaagacaaaat 635727  T
Q  125 ttctatttatagtttccttaaccaatgccctgagagcactggttagtaagaccctta 181  Q
    |||||||| ||| ||||||||||| || | |||||||| ||||||| ||||||||||    
T  635726 ttctatttgtagattccttaaccattgtcatgagagcaatggttagcaagaccctta 635670  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 25 - 158
Target Start/End: Original strand, 48338805 - 48338938
Alignment:
Q  25 aagggcattggttaagcaaccaaaacaattcaatttttataaaaaagttgtgtaattattatttaatcaaaagtcaaaatttatattttcaagataaatt 124  Q
    ||||||| |||||||||| ||||||||| | | ||||||||||||||||||||||| |||| || ||||||| | | |  |||||||| ||||||||| |    
T  48338805 aagggcaatggttaagcatccaaaacaagtaagtttttataaaaaagttgtgtaataattactttatcaaaaataacatcttatatttccaagataaaat 48338904  T
Q  125 ttctatttatagtttccttaaccaatgccctgag 158  Q
    |||||||||||  ||| ||||||||| |||||||    
T  48338905 ttctatttataaattctttaaccaattccctgag 48338938  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 35 - 158
Target Start/End: Complemental strand, 41287992 - 41287871
Alignment:
Q  35 gttaagcaaccaaaacaattcaatttttataaaaaagttgtgtaattattatttaatcaaaagtcaaaatttatattttcaagataaattttctatttat 134  Q
    |||||||||||||| |||||  ||||| |||||||| | |||||||||||| |||||||||| |||||| ||||||||| || | |||||||||||||||    
T  41287992 gttaagcaaccaaaccaattttatttt-ataaaaaa-tagtgtaattattacttaatcaaaaatcaaaacttatatttttaaaacaaattttctatttat 41287895  T
Q  135 agtttccttaaccaatgccctgag 158  Q
    ||||||||||| || || ||||||    
T  41287894 agtttccttaatcattgtcctgag 41287871  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 66 - 148
Target Start/End: Complemental strand, 48252351 - 48252269
Alignment:
Q  66 aaaaagttgtgtaattattatttaatcaaaagtcaaaatttatattttcaagataaattttctatttatagtttccttaacca 148  Q
    |||||||  ||| ||||||||||| ||||||||||||| |||||||||||||||||||||| ||||||||| |||||||||||    
T  48252351 aaaaagtgatgtcattattatttactcaaaagtcaaaacttatattttcaagataaattttttatttatagattccttaacca 48252269  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 31 - 148
Target Start/End: Original strand, 4020096 - 4020213
Alignment:
Q  31 attggttaagcaaccaaaacaattcaatttttataaaaaagttgtgtaattattatttaatcaaaagtcaaaatttatattttcaagataaattttctat 130  Q
    |||||||||| ||||||||||| | | ||||||| ||||| ||||||||| |||| |||||||||| | | | ||||||||||||||| ||| |||||||    
T  4020096 attggttaagtaaccaaaacaagtaagtttttatgaaaaaattgtgtaataattacttaatcaaaattaacattttatattttcaagacaaaatttctat 4020195  T
Q  131 ttatagtttccttaacca 148  Q
    || ||| |||||||||||    
T  4020196 ttgtagattccttaacca 4020213  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 65 - 181
Target Start/End: Complemental strand, 6785875 - 6785759
Alignment:
Q  65 aaaaaagttgtgtaattattatttaatcaaaagtcaaaatttatattttcaagataaattttctatttatagtttccttaaccaatgccctgagagcact 164  Q
    ||||||| |||||||| |||| || ||||||||| | | ||||||||||||||| |||  |||||||| |||  |||||||||| ||||||||| |||||    
T  6785875 aaaaaagatgtgtaatcattacttgatcaaaagtaacattttatattttcaagacaaaaattctatttgtagaatccttaaccattgccctgagggcact 6785776  T
Q  165 ggttagtaagaccctta 181  Q
    |||||| || |||||||    
T  6785775 ggttagcaataccctta 6785759  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 82 - 157
Target Start/End: Complemental strand, 19202249 - 19202174
Alignment:
Q  82 attatttaatcaaaagtcaaaatttatattttcaagataaattttctatttatagtttccttaaccaatgccctga 157  Q
    |||||||||||||||| ||||| |||||||||||||| ||||| ||||||||| | ||||||||||| ||| ||||    
T  19202249 attatttaatcaaaagccaaaacttatattttcaagaaaaattatctatttatggattccttaaccattgcactga 19202174  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 27 - 181
Target Start/End: Complemental strand, 44291348 - 44291196
Alignment:
Q  27 gggcattggttaagcaaccaaaacaattcaatttttataaaaaagttgtgtaattattatttaatcaaaagtcaaaatttatattttcaagataaatttt 126  Q
    |||||||||||||||| |||||| || | | | ||||| |||||||  ||||||||||| ||||| |||||| | | ||||||||| ||||| | |  ||    
T  44291348 gggcattggttaagca-ccaaaagaagtaagtatttattaaaaagtaatgtaattattacttaataaaaagtgacagtttatatttccaagacagaaatt 44291250  T
Q  127 ctatttatagtttccttaaccaatgccctgagagcactggttagtaagaccctta 181  Q
    |||||||||| ||||||||||| ||||| | | ||||||||||  ||||||||||    
T  44291249 ctatttatagattccttaaccagtgccccg-gggcactggttaacaagaccctta 44291196  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 58 - 148
Target Start/End: Original strand, 44698243 - 44698333
Alignment:
Q  58 tttttataaaaaagttgtgtaattattatttaatcaaaagtcaaaatttatattttcaagataaattttctatttatagtttccttaacca 148  Q
    ||||||| ||||| ||||||||| ||||||| ||||||||| | |  |||||||||||||| ||| ||||||||| ||| || ||||||||    
T  44698243 tttttatgaaaaaattgtgtaatcattattttatcaaaagtaacatcttatattttcaagacaaaatttctatttgtagatttcttaacca 44698333  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 33 - 139
Target Start/End: Complemental strand, 2127461 - 2127360
Alignment:
Q  33 tggttaagcaaccaaaacaattcaatttttataaaaaagttgtgtaattattatttaatcaaaagtcaaaatttatattttcaagataaattttctattt 132  Q
    ||||||||||||||||| || | | |||||||||||  || |||||||||||| |||||||||| ||||||   ||||| | |||| ||||||| |||||    
T  2127461 tggttaagcaaccaaaataagtaattttttataaaa--gtcgtgtaattattacttaatcaaaaatcaaaa---atattcttaagacaaattttttattt 2127367  T
Q  133 atagttt 139  Q
    |||||||    
T  2127366 atagttt 2127360  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 36 - 181
Target Start/End: Original strand, 12109653 - 12109797
Alignment:
Q  36 ttaagcaaccaaaacaattcaatttttataaaaaagttgtgtaattattatttaatcaaaagtcaaaatttatattttcaagataaattttctatttata 135  Q
    ||||||| |||||||||   | ||||||| |||||||||| ||||||||| ||| | |||||| | |  |||||||||||| | | | ||||||||| ||    
T  12109653 ttaagcatccaaaacaaacaattttttatgaaaaagttgtataattattacttagttaaaagtaatatcttatattttcaaaacataatttctatttgta 12109752  T
Q  136 gtttccttaaccaatgccctgagagcactggttagtaagaccctta 181  Q
    |  |||||||| |||||||| ||| |||||||||| ||||| ||||    
T  12109753 gaatccttaacgaatgccctaaga-cactggttagcaagacactta 12109797  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 29 - 129
Target Start/End: Complemental strand, 26835814 - 26835714
Alignment:
Q  29 gcattggttaagcaaccaaaacaattcaatttttataaaaaagttgtgtaattattatttaatcaaaagtcaaaatttatattttcaagataaattttct 128  Q
    |||||||||||||| | |||| | || || |||||| |||||||  | |||| |||| |||||||||||| | ||||||||||||||||| || ||||||    
T  26835814 gcattggttaagcagctaaaagagttaaaattttattaaaaagtgatataataattagttaatcaaaagtaacaatttatattttcaagacaatttttct 26835715  T
Q  129 a 129  Q
    |    
T  26835714 a 26835714  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 74 - 137
Target Start/End: Original strand, 23877727 - 23877790
Alignment:
Q  74 gtgtaattattatttaatcaaaagtcaaaatttatattttcaagataaattttctatttatagt 137  Q
    |||||||||||  ||||| ||||||||||| |||||| |||||| |||||||| ||||||||||    
T  23877727 gtgtaattattgcttaattaaaagtcaaaacttatatattcaaggtaaattttttatttatagt 23877790  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 31 - 113
Target Start/End: Original strand, 4490779 - 4490860
Alignment:
Q  31 attggttaagcaaccaaaacaattcaatttttataaaaaagttgtgtaattattatttaatcaaaagtcaaaatttatatttt 113  Q
    ||||||||| ||| |||||||| | || |||||| ||||  | ||||||||||||||| ||||||||| ||||||||||||||    
T  4490779 attggttaaacaatcaaaacaaat-aagttttattaaaagatagtgtaattattattttatcaaaagtaaaaatttatatttt 4490860  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 33 - 179
Target Start/End: Original strand, 49261780 - 49261926
Alignment:
Q  33 tggttaagcaaccaaaacaattcaatttttataaaaaagttgtgtaattattatttaatcaaaagtcaaaatttatattttcaagataaattttctattt 132  Q
    |||||||||| ||||||||| |  ||||| || ||||| |||||||||||||| |  ||||||||| | |  |||||||| ||||| ||| |||||||||    
T  49261780 tggttaagcatccaaaacaagtacattttcatgaaaaaattgtgtaattattactctatcaaaagtaacatcttatatttacaagacaaaatttctattt 49261879  T
Q  133 atagtttccttaaccaatgccctgagagcactggttagtaagaccct 179  Q
     ||  || |||||||| |||||  ||  || ||||||| ||||||||    
T  49261880 gtatatttcttaaccagtgccccaaggacaatggttagcaagaccct 49261926  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 114 - 179
Target Start/End: Original strand, 12373069 - 12373134
Alignment:
Q  114 caagataaattttctatttatagtttccttaaccaatgccctgagagcactggttagtaagaccct 179  Q
    ||||||||| ||| ||||| ||| ||||||||||| ||||||||| | ||||||||| ||||||||    
T  12373069 caagataaaatttatatttgtagattccttaaccattgccctgagggaactggttagcaagaccct 12373134  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 25 - 126
Target Start/End: Complemental strand, 54801451 - 54801350
Alignment:
Q  25 aagggcattggttaagcaaccaaaacaattcaatttttataaaaaagttgtgtaattattatttaatcaaaagtcaaaatttatattttcaagataaatt 124  Q
    ||||||| | ||||||||  ||||| || | | ||||||| ||||| |||||||||||||| || | ||||||| | |  ||||||||||||||||||||    
T  54801451 aagggcaatagttaagcatacaaaataagtaagtttttatgaaaaaattgtgtaattattactttagcaaaagtaacatcttatattttcaagataaatt 54801352  T
Q  125 tt 126  Q
    ||    
T  54801351 tt 54801350  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 56 - 182
Target Start/End: Complemental strand, 17109625 - 17109499
Alignment:
Q  56 aatttttataaaaaagttgtgtaattattatttaatcaaaagtcaaaatttatattttcaagata-aattttctatttatagtttccttaaccaatgccc 154  Q
    ||||||||| |||||||| ||||||||||| ||||| ||| || | | ||||||||| ||||||| ||  |||||||||||  || |||||||  |||||    
T  17109625 aatttttattaaaaagttatgtaattattacttaataaaatgttacagtttatatttccaagatagaaaattctatttataaatttcttaacccgtgccc 17109526  T
Q  155 tgagagcactggttagtaagacccttaa 182  Q
      | |||||||||||  |||||||||||    
T  17109525 cca-agcactggttaacaagacccttaa 17109499  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 25 - 116
Target Start/End: Original strand, 25319455 - 25319546
Alignment:
Q  25 aagggcattggttaagcaaccaaaacaattcaatttttataaaaaagttgtgtaattattatttaatcaaaagtcaaaatttatattttcaa 116  Q
    |||| |||||||||| || | ||||||||| | |||| ||  ||||| |||||||| |||||||| |||||||| | | |||||||||||||    
T  25319455 aaggacattggttaaacatctaaaacaattaagttttaatgtaaaaggtgtgtaatcattatttagtcaaaagtaacattttatattttcaa 25319546  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 100 - 139
Target Start/End: Complemental strand, 31472101 - 31472062
Alignment:
Q  100 aaaatttatattttcaagataaattttctatttatagttt 139  Q
    ||||||||||||||||| ||||||||| ||||||||||||    
T  31472101 aaaatttatattttcaaaataaattttttatttatagttt 31472062  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 59 - 153
Target Start/End: Original strand, 29458060 - 29458154
Alignment:
Q  59 ttttataaaaaagttgtgtaattattatttaatcaaaagtcaaaatttatattttcaagataaattttctatttatagtttccttaaccaatgcc 153  Q
    |||||| ||||||| ||||||| |||| ||| |||||| | | | ||||||||| ||||| || ||||||| || ||| ||||||||||| ||||    
T  29458060 ttttattaaaaagtggtgtaataattagttagtcaaaaataacagtttatatttccaagacaatttttctacttttagattccttaaccagtgcc 29458154  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 46 - 136
Target Start/End: Original strand, 47334873 - 47334963
Alignment:
Q  46 aaaacaattcaatttttataaaaaagttgtgtaattattatttaatcaaaagtcaaaatttatattttcaagataaattttctatttatag 136  Q
    ||||||| | |||||||||  |||||||||||||| ||||||| || |||| | ||   ||||||||| |||| ||| |||||||||||||    
T  47334873 aaaacaaataaatttttattgaaaagttgtgtaatcattattttataaaaaataaagtcttatatttttaagacaaaatttctatttatag 47334963  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 25 - 170
Target Start/End: Complemental strand, 1712045 - 1711900
Alignment:
Q  25 aagggcattggttaagcaaccaaaacaattcaatttttataaaaaagttgtgtaattattatttaatcaaaagtcaaaatttatattttcaagataaatt 124  Q
    ||||| ||||||||| |||| |||| || | ||||||||  ||||| | || ||||||||| ||| ||||| || | |  |||||||||||||| ||| |    
T  1712045 aagggtattggttaaacaactaaaataagtaaatttttaataaaaaatagtataattattacttagtcaaatgtaacatcttatattttcaagacaaaat 1711946  T
Q  125 ttctatttatagtttccttaaccaatgccctgagagcactggttag 170  Q
    || || || ||| ||||||||||| || | | |||| |||||||||    
T  1711945 ttataattttagattccttaaccattgtctttagagtactggttag 1711900  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 29 - 154
Target Start/End: Complemental strand, 15671233 - 15671109
Alignment:
Q  29 gcattggttaagcaaccaaaacaattcaatttttataaaaaagttgtgtaattattatttaatcaaaagtcaaaatttatattttcaagataaattttct 128  Q
    |||||||||||| |||||||  || | | ||||||| |||||||  ||||||||||| || || |||||| | | |||||||||  |||| |||  || |    
T  15671233 gcattggttaag-aaccaaatgaagtaagtttttattaaaaagtaatgtaattattacttgataaaaagtgacagtttatatttcgaagacaaaaatttt 15671135  T
Q  129 atttatagtttccttaaccaatgccc 154  Q
    |||||||| ||||||||||| |||||    
T  15671134 atttatagattccttaaccagtgccc 15671109  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 58 - 151
Target Start/End: Original strand, 29032437 - 29032530
Alignment:
Q  58 tttttataaaaaagttgtgtaattattatttaatcaaaagtcaaaatttatattttcaagataaattttctatttatagtttccttaaccaatg 151  Q
    ||||||| ||||||||||||||| |||| || ||||||||| | |  ||||||||| |||| ||| ||||| ||| |||  |||||||| ||||    
T  29032437 tttttatgaaaaagttgtgtaatcattacttgatcaaaagtaacatcttatatttttaagacaaaatttctgtttgtagaatccttaactaatg 29032530  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 75 - 116
Target Start/End: Complemental strand, 42788399 - 42788358
Alignment:
Q  75 tgtaattattatttaatcaaaagtcaaaatttatattttcaa 116  Q
    |||||||||||||| ||||||||| |||||||| ||||||||    
T  42788399 tgtaattattattttatcaaaagtaaaaatttacattttcaa 42788358  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 59 - 112
Target Start/End: Complemental strand, 49419139 - 49419086
Alignment:
Q  59 ttttataaaaaagttgtgtaattattatttaatcaaaagtcaaaatttatattt 112  Q
    |||||| |||||||| ||||||||||| ||||| |||||| | |||||||||||    
T  49419139 ttttattaaaaagttatgtaattattagttaataaaaagtgacaatttatattt 49419086  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 25 - 153
Target Start/End: Complemental strand, 11676857 - 11676729
Alignment:
Q  25 aagggcattggttaagcaaccaaaacaattcaatttttataaaaaagttgtgtaattattatttaatcaaaagtcaaaatttatattttcaagataaatt 124  Q
    ||||||||||||||| || |||||||||   | |||| |  ||||| |||||| || ||||||| ||||||||| |    || ||||||||||| ||| |    
T  11676857 aagggcattggttaaacatccaaaacaagcaagttttcaagaaaaaattgtgttatcattatttgatcaaaagtaacgtcttttattttcaagacaaaat 11676758  T
Q  125 ttctatttatagtttccttaaccaatgcc 153  Q
    || ||||| ||| |||||||| |||||||    
T  11676757 ttatatttgtagattccttaatcaatgcc 11676729  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 26 - 82
Target Start/End: Complemental strand, 19202453 - 19202398
Alignment:
Q  26 agggcattggttaagcaaccaaaacaattcaatttttataaaaaagttgtgtaatta 82  Q
    ||||||||||||||||||| ||||||||| | |||||||  |||||| |||||||||    
T  19202453 agggcattggttaagcaactaaaacaattaactttttat-taaaagtagtgtaatta 19202398  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 69; Significance: 4e-31; HSPs: 34)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 69; E-Value: 4e-31
Query Start/End: Original strand, 29 - 181
Target Start/End: Original strand, 18131188 - 18131339
Alignment:
Q  29 gcattggttaagcaaccaaaacaattcaatttttataaaaaagttgtgtaattattatttaatcaaaagtcaaaatttatattttcaagataaattttct 128  Q
    |||||||||||||||||||||||| | | ||||||| |||| || |||||||||||| |||||||  |||||||| |||||||||||||| |||||||||    
T  18131188 gcattggttaagcaaccaaaacaagtaactttttattaaaa-gtagtgtaattattacttaatcagtagtcaaaacttatattttcaagacaaattttct 18131286  T
Q  129 atttatagtttccttaaccaatgccctgagagcactggttagtaagaccctta 181  Q
    |||||| | || ||||| || ||||||||| ||| | ||||| ||||||||||    
T  18131287 atttatggatttcttaatcattgccctgagggcattagttagcaagaccctta 18131339  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 67 - 170
Target Start/End: Original strand, 40607332 - 40607435
Alignment:
Q  67 aaaagttgtgtaattattatttaatcaaaagtcaaaatttatattttcaagataaattttctatttatagtttccttaaccaatgccctgagagcactgg 166  Q
    |||||| |||||||||||| ||||||||||||||||| ||||||||| |||||||||||||||||||||  || |||||||| ||||||||| | |||||    
T  40607332 aaaagtagtgtaattattacttaatcaaaagtcaaaacttatatttttaagataaattttctatttataaatttcttaaccattgccctgagggtactgg 40607431  T
Q  167 ttag 170  Q
    ||||    
T  40607432 ttag 40607435  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 62; E-Value: 6e-27
Query Start/End: Original strand, 25 - 170
Target Start/End: Complemental strand, 44649059 - 44648914
Alignment:
Q  25 aagggcattggttaagcaaccaaaacaattcaatttttataaaaaagttgtgtaattattatttaatcaaaagtcaaaatttatattttcaagataaatt 124  Q
    ||||||| || ||||||| ||||||||| | | |||| || ||||||||||||||| |||| || ||||||||| | | ||||||||||||||| ||| |    
T  44649059 aagggcaatgattaagcatccaaaacaaataagttttcatgaaaaagttgtgtaatcattactttatcaaaagtaacattttatattttcaagacaaaat 44648960  T
Q  125 ttctatttatagtttccttaaccaatgccctgagagcactggttag 170  Q
    |||||||| ||| ||||||||||| ||||| ||| |||||||||||    
T  44648959 ttctatttgtagattccttaaccattgccccgagggcactggttag 44648914  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 26 - 178
Target Start/End: Original strand, 10451891 - 10452044
Alignment:
Q  26 agggcattggttaagcaaccaaaacaattcaattttt-ataaaaaagttgtgtaa-ttattatttaatcaaaagtcaaaatttatattttcaagataaat 123  Q
    ||||||||||||||||||| ||||||| | | ||||| |||||||| | |||||| |||||| ||||||||||||||||| ||||||||| || | |||     
T  10451891 agggcattggttaagcaactaaaacaagtaatttttttataaaaaa-tggtgtaaattattacttaatcaaaagtcaaaacttatatttttaatacaaaa 10451989  T
Q  124 tttctatttatagtttccttaaccaatgccctgagagcactggttagtaagaccc 178  Q
    ||| ||||||||||||||||||| |    |||||||||||||||||| |||||||    
T  10451990 tttttatttatagtttccttaactatgatcctgagagcactggttagcaagaccc 10452044  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 25 - 179
Target Start/End: Original strand, 20542379 - 20542533
Alignment:
Q  25 aagggcattggttaagcaaccaaaacaattcaatttttataaaaaagttgtgtaattattatttaatcaaaagtcaaaatttatattttcaagataaatt 124  Q
    |||||||||||||||||| ||||||| | | | ||||||  |||||  |||||||| |||| |||||||||||| | |  |||||||| |||||  || |    
T  20542379 aagggcattggttaagcatccaaaacgagtaagtttttaagaaaaaagtgtgtaatcattacttaatcaaaagtaacatcttatatttccaagacgaaat 20542478  T
Q  125 ttctatttatagtttccttaaccaatgccctgagagcactggttagtaagaccct 179  Q
    |||||||| ||| ||||||||||||||||||||| |||||| |||| ||||||||    
T  20542479 ttctatttgtagattccttaaccaatgccctgagggcactgtttagcaagaccct 20542533  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 66 - 148
Target Start/End: Original strand, 27283324 - 27283405
Alignment:
Q  66 aaaaagttgtgtaattattatttaatcaaaagtcaaaatttatattttcaagataaattttctatttatagtttccttaacca 148  Q
    |||| ||| ||||||||||||||||||||||||||||| ||||||| | || |||||||||||||||||||||||||||||||    
T  27283324 aaaatgttctgtaattattatttaatcaaaagtcaaaacttatattat-aaaataaattttctatttatagtttccttaacca 27283405  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 30 - 180
Target Start/End: Original strand, 3137397 - 3137547
Alignment:
Q  30 cattggttaagcaaccaaaacaattcaatttttataaaaaagttgtgtaattattatttaatcaaaagtcaaaatttatattttcaagataaattttcta 129  Q
    ||||||||| ||| ||||||||| | | ||| ||| ||||||||||||||| |||| || ||||||||| | |  ||| |||||||||| ||| ||||||    
T  3137397 cattggttaggcatccaaaacaaataagtttatatgaaaaagttgtgtaataattacttgatcaaaagtaacatcttacattttcaagacaaaatttcta 3137496  T
Q  130 tttatagtttccttaaccaatgccctgagagcactggttagtaagaccctt 180  Q
    ||| |   || |||||||| ||||||||| ||||||||||| |||||||||    
T  3137497 tttctgaatttcttaaccattgccctgagggcactggttagcaagaccctt 3137547  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 58 - 176
Target Start/End: Original strand, 4989721 - 4989838
Alignment:
Q  58 tttttataaaaaagttgtgtaattattatttaatcaaaagtcaaaatttatattttcaagataaattttctatttatagtttccttaaccaatgccctga 157  Q
    ||||||||||||| || ||||||| ||| || ||||||| |||||| |||||||||||||| ||||||| |||||||||||| |||||||| |||| | |    
T  4989721 tttttataaaaaa-ttatgtaattgttacttgatcaaaaatcaaaacttatattttcaagacaaattttttatttatagttttcttaaccattgccataa 4989819  T
Q  158 gagcactggttagtaagac 176  Q
    | |||| |||||| |||||    
T  4989820 gggcacgggttagcaagac 4989838  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 24 - 148
Target Start/End: Complemental strand, 35901538 - 35901414
Alignment:
Q  24 aaagggcattggttaagcaaccaaaacaattcaatttttataaaaaagttgtgtaattattatttaatcaaaagtcaaaatttatattttcaagataaat 123  Q
    |||||| |||||||||||| ||||||||| | | ||||||| ||||||||||| ||| |||||||||| |||||| | |  ||| |||||||| | |||     
T  35901538 aaagggtattggttaagcatccaaaacaagtaagtttttatgaaaaagttgtgcaatcattatttaattaaaagtaacatcttacattttcaaaacaaaa 35901439  T
Q  124 tttctatttatagtttccttaacca 148  Q
    ||||||||| ||| |||||||||||    
T  35901438 tttctatttgtagattccttaacca 35901414  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 75 - 148
Target Start/End: Complemental strand, 15869082 - 15869009
Alignment:
Q  75 tgtaattattatttaatcaaaagtcaaaatttatattttcaagataaattttctatttatagtttccttaacca 148  Q
    ||||||||||||||||| |||| ||||||||||||||||  || |||||||| |||||||||||| ||||||||    
T  15869082 tgtaattattatttaattaaaaatcaaaatttatattttttagttaaattttttatttatagttttcttaacca 15869009  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 64 - 183
Target Start/End: Complemental strand, 37561581 - 37561462
Alignment:
Q  64 taaaaaagttgtgtaattattatttaatcaaaagtcaaaatttatattttcaagataaattttctatttatagtttccttaaccaatgccctgagagcac 163  Q
    ||||||| |||||| ||||||| || ||||||||| |||  |||||||||||| ||||| ||||||||||||  ||| ||||||||| |  ||||  |||    
T  37561581 taaaaaaattgtgtgattattacttgatcaaaagtaaaatcttatattttcaaaataaaatttctatttataaattctttaaccaatactttgaggacac 37561482  T
Q  164 tggttagtaagacccttaaa 183  Q
    |  |||||||||||||||||    
T  37561481 ttattagtaagacccttaaa 37561462  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 31 - 98
Target Start/End: Original strand, 43917585 - 43917652
Alignment:
Q  31 attggttaagcaaccaaaacaattcaatttttataaaaaagttgtgtaattattatttaatcaaaagt 98  Q
    |||||||||||| ||||||||| | ||||||||||||||| ||||||||||||||||| || ||||||    
T  43917585 attggttaagcatccaaaacaagtaaatttttataaaaaaattgtgtaattattatttgattaaaagt 43917652  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 30 - 148
Target Start/End: Original strand, 10029159 - 10029277
Alignment:
Q  30 cattggttaagcaaccaaaacaattcaatttttataaaaaagttgtgtaattattatttaatcaaaagtcaaaatttatattttcaagataaattttcta 129  Q
    ||||||||||||| ||||| ||| | ||||||||| |||||||||| |||| |||| || ||||||||| | |  |||||||| ||||||||| ||| ||    
T  10029159 cattggttaagcatccaaatcaagtaaatttttatgaaaaagttgtataatcattacttgatcaaaagtaacatcttatatttccaagataaaattttta 10029258  T
Q  130 tttatagtttccttaacca 148  Q
    ||| ||| || ||||||||    
T  10029259 tttgtagatttcttaacca 10029277  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 25 - 179
Target Start/End: Original strand, 11150915 - 11151068
Alignment:
Q  25 aagggcattggttaagcaaccaaaacaattcaatttttataaaaaagttgtgtaattattatttaatcaaaagtcaaaatttatattttcaagataaatt 124  Q
    ||||||||||||||||||  ||||| || | | |||||| |||||| ||||||||| ||||||| ||||||||| | |  ||||||||  |||| |||      
T  11150915 aagggcattggttaagcattcaaaataagtaagttttta-aaaaaaattgtgtaatcattatttgatcaaaagtaacatcttatatttctaagacaaaaa 11151013  T
Q  125 ttctatttatagtttccttaaccaatgccctgagagcactggttagtaagaccct 179  Q
    || ||||| ||| |||||||| || ||||||||| |||| |||||| ||||||||    
T  11151014 ttttatttgtagattccttaatcattgccctgagggcaccggttaggaagaccct 11151068  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 28 - 179
Target Start/End: Original strand, 1342317 - 1342467
Alignment:
Q  28 ggcattggttaagcaaccaaaacaattcaatttttataaaaaagttgtgtaattattatttaatcaaaagtcaaaatttatattttcaagataaattttc 127  Q
    |||| |||||||||| | |||| || | | |||| |||||||||||||||||| ||| |||| |||||||| | |  |||||||| ||||||||| ||||    
T  1342317 ggcaatggttaagcatctaaaataagtaagttttcataaaaaagttgtgtaatcattgttta-tcaaaagtaacatcttatatttccaagataaaatttc 1342415  T
Q  128 tatttatagtttccttaaccaatgccctgagagcactggttagtaagaccct 179  Q
    |||||  || |||  |||||| ||  ||||||||||| ||||| ||||||||    
T  1342416 tatttgaagattctctaaccattgttctgagagcactcgttagcaagaccct 1342467  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 105 - 187
Target Start/End: Complemental strand, 10652571 - 10652489
Alignment:
Q  105 ttatattttcaagataaattttctatttatagtttccttaaccaatgccctgagagcactggttagtaagacccttaaataaa 187  Q
    ||||||||  |||| ||| ||||||||||||| ||| ||||  | ||||||||||||||||||||| ||||||||||| ||||    
T  10652571 ttatatttataagacaaaatttctatttatagattctttaattattgccctgagagcactggttagcaagacccttaattaaa 10652489  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 28 - 103
Target Start/End: Complemental strand, 30924283 - 30924209
Alignment:
Q  28 ggcattggttaagcaaccaaaacaattcaatttttataaaaaagttgtgtaattattatttaatcaaaagtcaaaa 103  Q
    ||||||||| || ||||||||| || | ||||||||||||||| | |||||||||||| |||||||||||| ||||    
T  30924283 ggcattggtcaaacaaccaaaataagtaaatttttataaaaaa-tagtgtaattattacttaatcaaaagtaaaaa 30924209  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 28 - 135
Target Start/End: Complemental strand, 34678324 - 34678218
Alignment:
Q  28 ggcattggttaagcaaccaaaacaattcaatttttataaaaaagttgtgtaattattatttaatcaaaagtcaaaatttatattttcaagataaattttc 127  Q
    |||| ||||||||||  ||||||||   | |||| |||||||| || ||||||||||| || ||||||||| | | |||| |||||||||| ||||||||    
T  34678324 ggcaatggttaagcattcaaaacaagcaacttttaataaaaaa-ttatgtaattattacttgatcaaaagtaacattttacattttcaagacaaattttc 34678226  T
Q  128 tatttata 135  Q
    ||||||||    
T  34678225 tatttata 34678218  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 65 - 183
Target Start/End: Complemental strand, 2768642 - 2768524
Alignment:
Q  65 aaaaaagttgtgtaattattatttaatcaaaagtcaaaatttatattttcaagataaattttctatttatagtttccttaaccaatgccctgagagcact 164  Q
    |||||| ||||| ||| |||||||||| |||| | | | ||||||||| ||||| ||| ||| ||||| |||  ||||||||||||  |||||||  |||    
T  2768642 aaaaaaattgtgcaatcattatttaattaaaactaacattttatatttccaagacaaaatttttatttgtagaatccttaaccaatatcctgagaatact 2768543  T
Q  165 ggttagtaagacccttaaa 183  Q
    | |||| ||||||||||||    
T  2768542 gattagcaagacccttaaa 2768524  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 33 - 98
Target Start/End: Complemental strand, 27507059 - 27506994
Alignment:
Q  33 tggttaagcaaccaaaacaattcaatttttataaaaaagttgtgtaattattatttaatcaaaagt 98  Q
    |||||| ||| | ||||||| | |||||| || ||||||||||||||||||||||| |||||||||    
T  27507059 tggttacgcatctaaaacaagtaaattttcatgaaaaagttgtgtaattattattttatcaaaagt 27506994  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 25 - 154
Target Start/End: Original strand, 29795498 - 29795626
Alignment:
Q  25 aagggcattggttaagcaaccaaaacaattcaatttttataaaaaagttgtgtaattattatttaatcaaaagtcaaaatttatattttcaagataaatt 124  Q
    |||| |||| |||||||| |||||| |||| | ||||| | |||||||  ||||||||||| || || |||||| | | |||||| ||| ||||||||      
T  29795498 aaggacattcgttaagca-ccaaaagaattaagtttttgttaaaaagtaatgtaattattaattgataaaaagtgacagtttatagttttaagataaaaa 29795596  T
Q  125 ttctatttatagtttccttaaccaatgccc 154  Q
    |||||||| | | |||||||||||||||||    
T  29795597 ttctatttttggattccttaaccaatgccc 29795626  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 32 - 129
Target Start/End: Original strand, 34832274 - 34832371
Alignment:
Q  32 ttggttaagcaaccaaaacaattcaatttttataaaaaagttgtgtaattattatttaatcaaaagtcaaaatttatattttcaagataaattttcta 129  Q
    ||||||||||||| |||| | || ||  ||||| ||||||| ||||||| |||| ||| |||||||| | ||||||||||| ||| |||| |||||||    
T  34832274 ttggttaagcaacgaaaagagttaaaaatttattaaaaagtggtgtaataattagttagtcaaaagtaacaatttatatttccaaaataatttttcta 34832371  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 81 - 145
Target Start/End: Original strand, 12958923 - 12958987
Alignment:
Q  81 tattatttaatcaaaagtcaaaatttatattttcaagataaattttctatttatagtttccttaa 145  Q
    ||||| |||||||||| | |||| ||||||||| |||| ||||||||||||||||| ||| ||||    
T  12958923 tattacttaatcaaaaataaaaacttatattttgaagacaaattttctatttatagattctttaa 12958987  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 25 - 150
Target Start/End: Complemental strand, 17720301 - 17720174
Alignment:
Q  25 aagggcattggtta--agcaaccaaaacaattcaatttttataaaaaagttgtgtaattattatttaatcaaaagtcaaaatttatattttcaagataaa 122  Q
    ||||||||||||||  |||| |||||||||   | |||| || ||||||||||||||| ||||  | ||||||| | | |  |||||||||||||| ||     
T  17720301 aagggcattggttataagcatccaaaacaaacaagttttcatgaaaaagttgtgtaatcattacatgatcaaaaataacatcttatattttcaagaaaat 17720202  T
Q  123 ttttctatttatagtttccttaaccaat 150  Q
     ||||||||||||| ||| |||||||||    
T  17720201 atttctatttatagattctttaaccaat 17720174  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 25 - 177
Target Start/End: Original strand, 40489842 - 40489993
Alignment:
Q  25 aagggcattggttaagcaaccaaaacaattcaatttttataaaaaagttgtgtaattattatttaatcaaaagtcaaaatttatattttcaagataaatt 124  Q
    ||||||| |||||||  | | ||||||| | | ||||||| |||||||| |||||| |||| || ||||| ||| | | ||||||||| ||||  ||| |    
T  40489842 aagggcaatggttaaatatctaaaacaaataagtttttatgaaaaagttatgtaatcattactttatcaatagtaacattttatatttacaaggcaaaat 40489941  T
Q  125 ttctatttatagtttccttaaccaatgccctgagagcactggttagtaagacc 177  Q
    || ||||  ||| ||||||||||| |||||| | |||||||||||| ||||||    
T  40489942 ttttattg-tagattccttaaccattgccctaaaagcactggttagcaagacc 40489993  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 74 - 133
Target Start/End: Complemental strand, 12987713 - 12987654
Alignment:
Q  74 gtgtaattattatttaatcaaaagtcaaaatttatattttcaagataaattttctattta 133  Q
    ||||||| ||||||||||||||||| |||| |||| ||||||||| ||| |||| |||||    
T  12987713 gtgtaatcattatttaatcaaaagtaaaaacttatgttttcaagacaaaatttccattta 12987654  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 58 - 136
Target Start/End: Original strand, 44947372 - 44947449
Alignment:
Q  58 tttttataaaaaagttgtgtaattattatttaatcaaaagtcaaaatttatattttcaagataaattttctatttatag 136  Q
    ||||||| |||||||||| |||| | || || ||||||||| | | ||||||||||||||| ||||||| |||||||||    
T  44947372 tttttatgaaaaagttgtataatcaatactttatcaaaagtaacattttatattttcaagacaaatttt-tatttatag 44947449  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 67 - 148
Target Start/End: Complemental strand, 3347590 - 3347509
Alignment:
Q  67 aaaagttgtgtaattattatttaatcaaaagtcaaaatttatattttcaagataaattttctatttatagtttccttaacca 148  Q
    ||||||||||||||||||| || || |||||| | |  |||||||||||||| ||| ||| ||||| ||| || ||||||||    
T  3347590 aaaagttgtgtaattattactttattaaaagtaacatcttatattttcaagacaaaatttttatttgtagatttcttaacca 3347509  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 59 - 148
Target Start/End: Complemental strand, 18200768 - 18200679
Alignment:
Q  59 ttttataaaaaagttgtgtaattattatttaatcaaaagtcaaaatttatattttcaagataaattttctatttatagtttccttaacca 148  Q
    |||||| ||||| ||||||||| |||| |||||||||||| | |  ||||||||| |||| ||| ||| ||||| ||| || ||||||||    
T  18200768 ttttatgaaaaaattgtgtaatcattacttaatcaaaagtaacatgttatatttttaagacaaaatttttatttgtagatttcttaacca 18200679  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 30 - 79
Target Start/End: Original strand, 27162832 - 27162881
Alignment:
Q  30 cattggttaagcaaccaaaacaattcaatttttataaaaaagttgtgtaa 79  Q
    ||||||||||||| |||||||||   | ||||||||||||||||||||||    
T  27162832 cattggttaagcatccaaaacaagcaagtttttataaaaaagttgtgtaa 27162881  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 77 - 134
Target Start/End: Complemental strand, 34085275 - 34085218
Alignment:
Q  77 taattattatttaatcaaaagtcaaaatttatattttcaagataaattttctatttat 134  Q
    ||||||||  ||||| ||||||||||| |||||||||||| | ||||||| |||||||    
T  34085275 taattattgcttaattaaaagtcaaaacttatattttcaaaacaaattttttatttat 34085218  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 58 - 118
Target Start/End: Original strand, 20821915 - 20821975
Alignment:
Q  58 tttttataaaaaagttgtgtaattattatttaatcaaaagtcaaaatttatattttcaaga 118  Q
    ||||||| |||||||  ||||||||||| ||||| |||||| | |||||||||||| ||||    
T  20821915 tttttattaaaaagtaatgtaattattacttaataaaaagtgacaatttatatttttaaga 20821975  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 26 - 98
Target Start/End: Complemental strand, 23725745 - 23725673
Alignment:
Q  26 agggcattggttaagcaaccaaaacaattcaatttttataaaaaagttgtgtaattattatttaatcaaaagt 98  Q
    ||||||||||||||||| ||||||||| | | |||| || |||||||||||| || |||| | |||| |||||    
T  23725745 agggcattggttaagcatccaaaacaagtaagttttcatgaaaaagttgtgtgatcattactcaatcgaaagt 23725673  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 25 - 133
Target Start/End: Complemental strand, 23797614 - 23797506
Alignment:
Q  25 aagggcattggttaagcaaccaaaacaattcaatttttataaaaaagttgtgtaattattatttaatcaaaagtcaaaatttatattttcaagataaatt 124  Q
    ||||||| ||||||| |||| ||||||| | ||||||||   ||||||  || |||||||| ||  ||||  || | |||||||||||||||||||||      
T  23797614 aagggcaatggttaaacaactaaaacaagtaaatttttaatgaaaagtgatgaaattattacttggtcaagtgtgacaatttatattttcaagataaaac 23797515  T
Q  125 ttctattta 133  Q
    |||||||||    
T  23797514 ttctattta 23797506  T

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Target: scaffold0017 (Bit Score: 51; Significance: 2e-20; HSPs: 1)
Name: scaffold0017
Description:

Target: scaffold0017; HSP #1
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 31 - 148
Target Start/End: Original strand, 31466 - 31583
Alignment:
Q  31 attggttaagcaaccaaaacaattcaatttttataaaaaagttgtgtaattattatttaatcaaaagtcaaaatttatattttcaagataaatt-ttcta 129  Q
    |||||||||||||||||||||| | | ||||||||||||| || | ||||||||| ||||||||||| ||||| |||||||||||| ||   || || ||    
T  31466 attggttaagcaaccaaaacaagtaactttttataaaaaaatt-tataattattagttaatcaaaaggcaaaacttatattttcaaaattttttatttta 31564  T
Q  130 tttatagtttccttaacca 148  Q
    |||||||||||||||||||    
T  31565 tttatagtttccttaacca 31583  T

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Target: scaffold0039 (Bit Score: 46; Significance: 2e-17; HSPs: 1)
Name: scaffold0039
Description:

Target: scaffold0039; HSP #1
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 28 - 145
Target Start/End: Complemental strand, 30105 - 29988
Alignment:
Q  28 ggcattggttaagcaaccaaaacaattcaatttttataaaaaagttgtgtaattattatttaatcaaaagtcaaaatttatattttcaagataaattttc 127  Q
    |||||||||||| ||  |||||||| | | ||||||| ||||  |||||||||||||||||||| |||||| | |  |||||||||||| ||||| ||||    
T  30105 ggcattggttaaacactcaaaacaagtaagtttttatgaaaagtttgtgtaattattatttaattaaaagtaacatcttatattttcaaaataaagtttc 30006  T
Q  128 tatttatagtttccttaa 145  Q
    ||||| ||| ||||||||    
T  30005 tatttgtagattccttaa 29988  T

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Target: scaffold0011 (Bit Score: 40; Significance: 0.00000000000009; HSPs: 1)
Name: scaffold0011
Description:

Target: scaffold0011; HSP #1
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 77 - 148
Target Start/End: Original strand, 12923 - 12994
Alignment:
Q  77 taattattatttaatcaaaagtcaaaatttatattttcaagataaattttctatttatagtttccttaacca 148  Q
    ||||||||| | ||||||||||  ||||||||||||| || |||| |||||||||||||||||| |||||||    
T  12923 taattattactaaatcaaaagtttaaatttatatttttaaaataatttttctatttatagtttctttaacca 12994  T

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Target: scaffold0123 (Bit Score: 39; Significance: 0.0000000000003; HSPs: 1)
Name: scaffold0123
Description:

Target: scaffold0123; HSP #1
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 28 - 146
Target Start/End: Original strand, 17529 - 17647
Alignment:
Q  28 ggcattggttaagcaaccaaaacaattcaatttttataaaaaagttgtgtaattattatttaatcaaaagtcaaaatttatattttcaagataaattttc 127  Q
    |||||||||||| ||| |||||||| | | |||||    ||||||  | ||||||||| |||||||||| || ||| ||||||||||||   ||||||||    
T  17529 ggcattggttaaacaatcaaaacaaataacttttttattaaaagtaatataattattaattaatcaaaattcgaaacttatattttcaactcaaattttc 17628  T
Q  128 tatttatagtttccttaac 146  Q
    ||||||||| |||||||||    
T  17629 tatttatagattccttaac 17647  T

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Target: scaffold0886 (Bit Score: 33; Significance: 0.000000001; HSPs: 1)
Name: scaffold0886
Description:

Target: scaffold0886; HSP #1
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 59 - 135
Target Start/End: Complemental strand, 1192 - 1116
Alignment:
Q  59 ttttataaaaaagttgtgtaattattatttaatcaaaagtcaaaatttatattttcaagataaattttctatttata 135  Q
    |||||| |||||||  ||||||||||| ||||| |||||| | | ||||||||||||||| |||  |||||||||||    
T  1192 ttttattaaaaagtaatgtaattattacttaataaaaagtgacagtttatattttcaagaaaaaaattctatttata 1116  T

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Target: scaffold0204 (Bit Score: 32; Significance: 0.000000005; HSPs: 1)
Name: scaffold0204
Description:

Target: scaffold0204; HSP #1
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 105 - 180
Target Start/End: Complemental strand, 15407 - 15332
Alignment:
Q  105 ttatattttcaagataaattttctatttatagtttccttaaccaatgccctgagagcactggttagtaagaccctt 180  Q
    |||||||||||||| |||  |||||||||||  |||||||| || |  |||||||||||||||||| |||| ||||    
T  15407 ttatattttcaagacaaaaattctatttataaattccttaatcattatcctgagagcactggttagcaagatcctt 15332  T

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Target: scaffold0283 (Bit Score: 31; Significance: 0.00000002; HSPs: 1)
Name: scaffold0283
Description:

Target: scaffold0283; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 58 - 136
Target Start/End: Original strand, 3350 - 3428
Alignment:
Q  58 tttttataaaaaagttgtgtaattattatttaatcaaaagtcaaaatttatattttcaagataaattttctatttatag 136  Q
    ||||||| |||||||||| |||| | || || ||||||||| | | ||||||||||||||| ||| ||| |||||||||    
T  3350 tttttatgaaaaagttgtataatcaatactttatcaaaagtaacattttatattttcaagacaaaatttttatttatag 3428  T

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Target: scaffold0079 (Bit Score: 31; Significance: 0.00000002; HSPs: 1)
Name: scaffold0079
Description:

Target: scaffold0079; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 30 - 148
Target Start/End: Original strand, 51643 - 51761
Alignment:
Q  30 cattggttaagcaaccaaaacaattcaatttttataaaaaagttgtgtaattattatttaatcaaaagtcaaaatttatattttcaagataaattttcta 129  Q
    |||||||||| || |||||| || | ||||||||| ||||| || |||||| |||| |||||||||||| | | |||||||||  |||| |||  || ||    
T  51643 cattggttaaacatccaaaataaataaatttttatgaaaaaattatgtaatcattacttaatcaaaagtaacattttatatttcaaagacaaaaatttta 51742  T
Q  130 tttatagtttccttaacca 148  Q
    ||| ||  |||||||||||    
T  51743 tttgtaaattccttaacca 51761  T

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Target: scaffold0036 (Bit Score: 30; Significance: 0.00000008; HSPs: 1)
Name: scaffold0036
Description:

Target: scaffold0036; HSP #1
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 59 - 116
Target Start/End: Original strand, 36558 - 36615
Alignment:
Q  59 ttttataaaaaagttgtgtaattattatttaatcaaaagtcaaaatttatattttcaa 116  Q
    ||||| ||||||||||| |||| ||||||||||||||||| | |  ||||||||||||    
T  36558 ttttaaaaaaaagttgtataatcattatttaatcaaaagtaacatcttatattttcaa 36615  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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