View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
|
Alignment Overview
Query: NF10179_low_11 (Length: 458)
Name: NF10179_low_11
Description: NF10179
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF10179_low_11 |
 | |
|
| [»] scaffold0596 (1 HSPs) |
| | |
|
| [»] scaffold0035 (1 HSPs) |
| | |
|
| [»] scaffold0045 (1 HSPs) |
| | |
|
| [»] scaffold0096 (1 HSPs) |
| | |
|
| [»] scaffold0157 (1 HSPs) |
| | |
|
| [»] scaffold0475 (1 HSPs) |
| | |
|
Alignment Details
Target: chr7 (Bit Score: 226; Significance: 1e-124; HSPs: 5)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 226; E-Value: 1e-124
Query Start/End: Original strand, 170 - 443
Target Start/End: Complemental strand, 43071504 - 43071228
Alignment:
| Q |
170 |
tatcatacttatatctaatctttgttaacattgctaatgaaattgcaaactctaaacttaaatggttttggctccaaaacaagggaggccgttggatctc |
269 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||| |||||| |||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
43071504 |
tatcatacttatatctaatctttgttaacattgctaatgaaattgcaaaccctaaacctaaatggttttggctccaaaacaagggaggccgttggatctc |
43071405 |
T |
|
| Q |
270 |
atcatttggctaaccatgcatctcatcatttgatctaatccgagtcaaattttcaaatttgatgtatatttccta--cacttatccaaattttgactcat |
367 |
Q |
| |
|
||||||||||||| ||||||||||||| |||||||||||| |||||||||||||||||||||||||||||||||| ||||||||||| ||||||||||| |
|
|
| T |
43071404 |
atcatttggctaagcatgcatctcatcctttgatctaatctgagtcaaattttcaaatttgatgtatatttcctatgcacttatccaagttttgactcat |
43071305 |
T |
|
| Q |
368 |
taattatcctccaattcctaaattgactccacacttatctatgtccacctctttctccttca-ttttaagttctctt |
443 |
Q |
| |
|
|||||||||||||||||| |||||||||||||||||||| |||||||||||||||||||||| |||||||||||||| |
|
|
| T |
43071304 |
taattatcctccaattcccaaattgactccacacttatcgatgtccacctctttctccttcatttttaagttctctt |
43071228 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #2
Raw Score: 203; E-Value: 1e-111
Query Start/End: Original strand, 171 - 443
Target Start/End: Original strand, 1262088 - 1262364
Alignment:
| Q |
171 |
atcatacttatatctaatctttgttaacattgctaatgaaattgcaaactctaaacttaaatggttttggctccaaaacaagggaggccgttggatctca |
270 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||| |||||||| |||||| |||||||||||||||||||||||||||| |||||||||||||| |
|
|
| T |
1262088 |
atcatacttatatctaatctttgttaacattgctaatgactttgcaaaccctaaacctaaatggttttggctccaaaacaagggaagccgttggatctca |
1262187 |
T |
|
| Q |
271 |
tcatttggctaaccatgcatctcatcatttgatctaatccgagtcaaattttcaaatttgatgtatatttccta--cacttatccaaattttgactcatt |
368 |
Q |
| |
|
|||||||||||| ||||||||||||| |||||||||||| |||||||| ||||||||||||||||||||||||| ||||||||||| |||||||||||| |
|
|
| T |
1262188 |
tcatttggctaagcatgcatctcatcctttgatctaatctgagtcaaactttcaaatttgatgtatatttcctatgcacttatccaagttttgactcatt |
1262287 |
T |
|
| Q |
369 |
aattatcctccaattcctaaattgactccacacttatctatgtccacctctttctccttca--ttttaagttctctt |
443 |
Q |
| |
|
||||||||||||||||| |||||||||||||||||||| |||| ||||||||||||||||| |||||||||||||| |
|
|
| T |
1262288 |
aattatcctccaattcccaaattgactccacacttatcgatgttcacctctttctccttcattttttaagttctctt |
1262364 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #3
Raw Score: 179; E-Value: 2e-96
Query Start/End: Original strand, 171 - 443
Target Start/End: Complemental strand, 48849928 - 48849652
Alignment:
| Q |
171 |
atcatacttatatctaatctttgttaacattgctaatgaaattgcaaactctaaacttaaatggttttggctccaaaacaagggaggccgttggatctca |
270 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||| ||| ||| |||||| |||||||||||||||||||||||||||| ||||||||||| |
|
|
| T |
48849928 |
atcatacttatatctaatctttgttaacattgctaatgactttgtaaatcctaaacctaaatggttttggctccaaaacaagggattttgttggatctca |
48849829 |
T |
|
| Q |
271 |
tcatttggctaaccatgcatctcatcatttgatctaatccgagtcaaattttcaaatttgatgtatatttccta--cacttatccaaattttgactcatt |
368 |
Q |
| |
|
|||||||||||| ||||||||||||| |||||||||||| |||||||| ||||||||||||||||||||||||| ||||||||||| |||||||||||| |
|
|
| T |
48849828 |
tcatttggctaagcatgcatctcatcctttgatctaatctgagtcaaactttcaaatttgatgtatatttcctatgcacttatccaagttttgactcatt |
48849729 |
T |
|
| Q |
369 |
aattatcctccaattcctaaattgactccacacttatctatgtccacctctttctccttca--ttttaagttctctt |
443 |
Q |
| |
|
|||||||||| |||||| |||||||||||||||||||| |||| ||||||||||||||||| |||||||||||||| |
|
|
| T |
48849728 |
aattatcctcaaattcccaaattgactccacacttatcgatgttcacctctttctccttcattttttaagttctctt |
48849652 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #4
Raw Score: 157; E-Value: 3e-83
Query Start/End: Original strand, 171 - 433
Target Start/End: Complemental strand, 26910102 - 26909842
Alignment:
| Q |
171 |
atcatacttatatctaatctttgttaacattgctaatgaaattgcaaactctaaacttaaatggttttggctccaaaacaagggaggccgttggatctca |
270 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||| | |||||||| |||||| ||||||| ||||||||||||||||||||| || |||||||| | |
|
|
| T |
26910102 |
atcatacttatatctaatctttgttaacattgctaataactttgcaaaccctaaacctaaatggatttggctccaaaacaagggagaccattggatctta |
26910003 |
T |
|
| Q |
271 |
tcatttggctaaccatgcatctcatcatttgatctaatccgagtcaaattttcaaatttgatgtatatttccta--cacttatccaaattttgactcatt |
368 |
Q |
| |
|
|||||||||||| ||||||||||||| |||||||||||| |||||||| ||||||||||||||||||||||||| ||||||| ||| ||||||||| |
|
|
| T |
26910002 |
tcatttggctaagcatgcatctcatcctttgatctaatctgagtcaaactttcaaatttgatgtatatttcctatgcacttattcaagttttgactc--- |
26909906 |
T |
|
| Q |
369 |
aattatcctccaattcctaaattgactccacacttatctatgtccacctctttctccttcatttt |
433 |
Q |
| |
|
|||||||||||||||| | |||||||||||||||||| ||| |||||| ||||||||||||||| |
|
|
| T |
26909905 |
-attatcctccaattcccagattgactccacacttatccatgcccacctttttctccttcatttt |
26909842 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #5
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 178 - 247
Target Start/End: Original strand, 22007347 - 22007416
Alignment:
| Q |
178 |
ttatatctaatctttgttaacattgctaatgaaattgcaaactctaaacttaaatggttttggctccaaa |
247 |
Q |
| |
|
||||||||||| |||||||||||||||||||| || ||||| ||||| |||||||||||||||||||| |
|
|
| T |
22007347 |
ttatatctaatttttgttaacattgctaatgactttacaaaccctaaatctaaatggttttggctccaaa |
22007416 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2 (Bit Score: 225; Significance: 1e-124; HSPs: 6)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 225; E-Value: 1e-124
Query Start/End: Original strand, 171 - 443
Target Start/End: Complemental strand, 23349101 - 23348826
Alignment:
| Q |
171 |
atcatacttatatctaatctttgttaacattgctaatgaaattgcaaactctaaacttaaatggttttggctccaaaacaagggaggccgttggatctca |
270 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||||| |||||| ||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
23349101 |
atcatacttatatctaatctttgttaacattgctaatgaaattgcaaaccctaaacctaaatggttttggctccaaaacaagggaggccgttggatctca |
23349002 |
T |
|
| Q |
271 |
tcatttggctaaccatgcatctcatcatttgatctaatccgagtcaaattttcaaatttgatgtatatttccta--cacttatccaaattttgactcatt |
368 |
Q |
| |
|
|||||||||||| ||||||||||||| |||||||||||| |||||||||||||||||||||||||||||||||| ||||||||||| |||||||||||| |
|
|
| T |
23349001 |
tcatttggctaagcatgcatctcatcctttgatctaatctgagtcaaattttcaaatttgatgtatatttcctatgcacttatccaagttttgactcatt |
23348902 |
T |
|
| Q |
369 |
aattatcctccaattcctaaattgactccacacttatctatgtccacctctttctccttca-ttttaagttctctt |
443 |
Q |
| |
|
||||||||||||||||| |||||||||||||||||||| |||||||||||||||||||||| |||||||||||||| |
|
|
| T |
23348901 |
aattatcctccaattcccaaattgactccacacttatcgatgtccacctctttctccttcatttttaagttctctt |
23348826 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #2
Raw Score: 214; E-Value: 1e-117
Query Start/End: Original strand, 170 - 443
Target Start/End: Complemental strand, 18355435 - 18355159
Alignment:
| Q |
170 |
tatcatacttatatctaatctttgttaacattgctaatgaaattgcaaactctaaacttaaatggttttggctccaaaacaagggaggccgttggatctc |
269 |
Q |
| |
|
|||||||||||||| ||||||||||||||||||||||||||||||||||| |||||| |||||||||||||||||||||||||||||| ||||||||||| |
|
|
| T |
18355435 |
tatcatacttatatttaatctttgttaacattgctaatgaaattgcaaaccctaaacctaaatggttttggctccaaaacaagggaggtcgttggatctc |
18355336 |
T |
|
| Q |
270 |
atcatttggctaaccatgcatctcatcatttgatctaatccgagtcaaattttcaaatttgatgtatatttccta--cacttatccaaattttgactcat |
367 |
Q |
| |
|
||||||||||||| ||||||||||||| ||| |||||||| |||||||||||||||||||||||||||||||||| ||||||||||| ||||||||||| |
|
|
| T |
18355335 |
atcatttggctaagcatgcatctcatcctttaatctaatctgagtcaaattttcaaatttgatgtatatttcctatgcacttatccaagttttgactcat |
18355236 |
T |
|
| Q |
368 |
taattatcctccaattcctaaattgactccacacttatctatgtccacctctttctccttca-ttttaagttctctt |
443 |
Q |
| |
|
|||||||||||||||||| |||||||||||||||||||| |||||||||||||||||||||| |||||||||||||| |
|
|
| T |
18355235 |
taattatcctccaattcccaaattgactccacacttatcgatgtccacctctttctccttcatttttaagttctctt |
18355159 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #3
Raw Score: 210; E-Value: 1e-115
Query Start/End: Original strand, 182 - 443
Target Start/End: Original strand, 12741699 - 12741963
Alignment:
| Q |
182 |
atctaatctttgttaacattgctaatgaaattgcaaactctaaacttaaatggttttggctccaaaacaagggaggccgttggatctcatcatttggcta |
281 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||| |||||| |||||||||||||||||||||||| ||||||||||||||||||||||||||||| |
|
|
| T |
12741699 |
atctaatctttgttaacattgctaatgaaattgcaaaccctaaacctaaatggttttggctccaaaacaaaggaggccgttggatctcatcatttggcta |
12741798 |
T |
|
| Q |
282 |
accatgcatctcatcatttgatctaatccgagtcaaattttcaaatttgatgtatatttccta--cacttatccaaattttgactcattaattatcctcc |
379 |
Q |
| |
|
| ||||||||||||| |||||||||||| |||||||||||||||||||||||||||||||||| ||||||||||| ||||||||||||||||||||||| |
|
|
| T |
12741799 |
agcatgcatctcatcctttgatctaatctgagtcaaattttcaaatttgatgtatatttcctatgcacttatccaagttttgactcattaattatcctcc |
12741898 |
T |
|
| Q |
380 |
aattcctaaattgactccacacttatctatgtccacctctttctccttca-ttttaagttctctt |
443 |
Q |
| |
|
|||||| |||||||||||||||||||| |||||||||||||||||||||| |||||||||||||| |
|
|
| T |
12741899 |
aattcccaaattgactccacacttatcgatgtccacctctttctccttcatttttaagttctctt |
12741963 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #4
Raw Score: 177; E-Value: 3e-95
Query Start/End: Original strand, 169 - 443
Target Start/End: Complemental strand, 10329015 - 10328743
Alignment:
| Q |
169 |
atatcatacttatatctaatctttgttaacattgctaatgaaattgcaaactctaaacttaaatggttttggctccaaaacaagggaggccgttggatct |
268 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||||||| |||||| ||||| ||||||| || |||||||||||||||||||||||| |
|
|
| T |
10329015 |
atatcatacttatatctaatctttgttaacattgctaatgaaattgcaaaccctaaacctaaattgttttggttctaaaacaagggaggccgttggatct |
10328916 |
T |
|
| Q |
269 |
catcatttggctaaccatgcatctcat-catttgatctaatccgagtcaaattttcaaatttgatgtatatttccta--cacttatccaaattttgactc |
365 |
Q |
| |
|
|||||||||||||| |||||||||||| | |||||||||||| ||||||||||| ||||||| |||||||| ||||||||||| ||||||||| |
|
|
| T |
10328915 |
catcatttggctaagcatgcatctcatccttttgatctaatctgagtcaaatttgaaaatttg------atttcctatgcacttatccaagttttgactc |
10328822 |
T |
|
| Q |
366 |
attaattatcctccaattcctaaattgactccacacttatctatgtccacctctttctccttca-ttttaagttctctt |
443 |
Q |
| |
|
|||||||||||||||||||| |||||||||||||||||||| |||||||||||||||||||||| |||||||||||||| |
|
|
| T |
10328821 |
attaattatcctccaattcccaaattgactccacacttatcgatgtccacctctttctccttcatttttaagttctctt |
10328743 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #5
Raw Score: 86; E-Value: 6e-41
Query Start/End: Original strand, 171 - 344
Target Start/End: Complemental strand, 1616035 - 1615863
Alignment:
| Q |
171 |
atcatacttatatctaatctttgttaacattgctaatgaaattgcaaactctaaacttaaatggttttggctccaaaacaagggaggccgttggatctca |
270 |
Q |
| |
|
||||| |||||||| ||||||||||||||||| |||||| ||| || | |||| ||||||||||| |||||||| |||||||| ||||||||| || |
|
|
| T |
1616035 |
atcatccttatatccaatctttgttaacattgttaatgactttgtaaccattaaatctaaatggtttttgctccaaa-caagggagatcgttggatcgca |
1615937 |
T |
|
| Q |
271 |
tcatttggctaaccatgcatctcatcatttgatctaatccgagtcaaattttcaaatttgatgtatatttccta |
344 |
Q |
| |
|
|||||||||||| ||||||||||||| ||||||||||| |||||||| ||||||||||||||||||||||||| |
|
|
| T |
1615936 |
tcatttggctaagcatgcatctcatcctttgatctaatttgagtcaaactttcaaatttgatgtatatttccta |
1615863 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #6
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 172 - 344
Target Start/End: Original strand, 24454516 - 24454688
Alignment:
| Q |
172 |
tcatacttatatctaatctttgttaacattgctaatgaaattgcaaactctaaacttaaatggttttggctccaaaacaagggaggccgttggatctcat |
271 |
Q |
| |
|
|||||||||||||||||||| ||||||||||||| |||||||| |||||| ||||| ||| ||| ||||| ||||| |||||||||||||||| |
|
|
| T |
24454516 |
tcatacttatatctaatcttaattaacattgctaagaccattgcaaatcctaaacctaaattttttaggcgccaaa-caaggagggccgttggatctcat |
24454614 |
T |
|
| Q |
272 |
catttggctaaccatgcatctcatcatttgatctaatccga-gtcaaattttcaaatttgatgtatatttccta |
344 |
Q |
| |
|
||||||||| ||| ||||||||| |||||||||||| || ||||| ||||||||||||||| | ||||||| |
|
|
| T |
24454615 |
catttggcttgacattcatctcatcctttgatctaatctgacttcaaactttcaaatttgatgtctttttccta |
24454688 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5 (Bit Score: 220; Significance: 1e-121; HSPs: 11)
Name: chr5
Description:
Target: chr5; HSP #1
Raw Score: 220; E-Value: 1e-121
Query Start/End: Original strand, 168 - 443
Target Start/End: Complemental strand, 7473613 - 7473335
Alignment:
| Q |
168 |
catatcatacttatatctaatctttgttaacattgctaatgaaattgcaaactctaaacttaaatggttttggctccaaaacaagggaggccgttggatc |
267 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||| |||||| |||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
7473613 |
catatcatacttatatctaatctttgttaacattgctaatgaaattgcaaaccctaaacctaaatggttttggctccaaaacaagggaggccgttggatc |
7473514 |
T |
|
| Q |
268 |
tcatcatttggctaaccatgcatctcatcatttgatctaatccgagtcaaattttcaaatttgatgtatatttccta--cacttatccaaattttgactc |
365 |
Q |
| |
|
||||||||| ||||| ||||||||||||| |||||||||||| |||||||||||||||||||||||||||||||||| ||||||||||| ||||||||| |
|
|
| T |
7473513 |
tcatcatttagctaagcatgcatctcatcctttgatctaatctgagtcaaattttcaaatttgatgtatatttcctatgcacttatccaagttttgactc |
7473414 |
T |
|
| Q |
366 |
attaattatcctccaattcctaaattgactccacacttatctatgtccacctctttctccttca-ttttaagttctctt |
443 |
Q |
| |
|
|||| ||||||||||||||| |||||||||||||||||||| |||||||||||||||||||||| |||||||||||||| |
|
|
| T |
7473413 |
attagttatcctccaattcccaaattgactccacacttatcgatgtccacctctttctccttcatttttaagttctctt |
7473335 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #2
Raw Score: 217; E-Value: 1e-119
Query Start/End: Original strand, 171 - 443
Target Start/End: Original strand, 9043802 - 9044077
Alignment:
| Q |
171 |
atcatacttatatctaatctttgttaacattgctaatgaaattgcaaactctaaacttaaatggttttggctccaaaacaagggaggccgttggatctca |
270 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||||| |||||| ||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
9043802 |
atcatacttatatctaatctttgttaacattgctaatgaaattgcaaaccctaaacctaaatggttttggctccaaaacaagggaggccgttggatctca |
9043901 |
T |
|
| Q |
271 |
tcatttggctaaccatgcatctcatcatttgatctaatccgagtcaaattttcaaatttgatgtatatttccta--cacttatccaaattttgactcatt |
368 |
Q |
| |
|
|||||||||||| ||||||||||||| |||||||||||| |||||||||||| ||||||||||||||||||||| || |||||||| |||||||||||| |
|
|
| T |
9043902 |
tcatttggctaagcatgcatctcatcctttgatctaatctgagtcaaatttttaaatttgatgtatatttcctatgcatttatccaagttttgactcatt |
9044001 |
T |
|
| Q |
369 |
aattatcctccaattcctaaattgactccacacttatctatgtccacctctttctccttca-ttttaagttctctt |
443 |
Q |
| |
|
||||||||||||||||| |||||||||||||||||||| |||||||||||||||||||||| |||||||||||||| |
|
|
| T |
9044002 |
aattatcctccaattcccaaattgactccacacttatcgatgtccacctctttctccttcatttttaagttctctt |
9044077 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #3
Raw Score: 216; E-Value: 1e-118
Query Start/End: Original strand, 172 - 443
Target Start/End: Complemental strand, 30442667 - 30442393
Alignment:
| Q |
172 |
tcatacttatatctaatctttgttaacattgctaatgaaattgcaaactctaaacttaaatggttttggctccaaaacaagggaggccgttggatctcat |
271 |
Q |
| |
|
|||| ||||||||||||||||||||||||||||||||||||||||||| |||||| |||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
30442667 |
tcatgcttatatctaatctttgttaacattgctaatgaaattgcaaaccctaaacctaaatggttttggctccaaaacaagggaggccgttggatctcat |
30442568 |
T |
|
| Q |
272 |
catttggctaaccatgcatctcatcatttgatctaatccgagtcaaattttcaaatttgatgtatatttccta--cacttatccaaattttgactcatta |
369 |
Q |
| |
|
||||||||||| ||||||||||||| |||||||||||| |||||||||||||||||||||||||||||||||| ||||| ||||| ||||||||||||| |
|
|
| T |
30442567 |
catttggctaagcatgcatctcatcctttgatctaatctgagtcaaattttcaaatttgatgtatatttcctatgcacttttccaagttttgactcatta |
30442468 |
T |
|
| Q |
370 |
attatcctccaattcctaaattgactccacacttatctatgtccacctctttctccttcatttt-aagttctctt |
443 |
Q |
| |
|
|||||||||||||||| |||||||||||||||||||| |||||||||||||||||||||||||| |||||||||| |
|
|
| T |
30442467 |
attatcctccaattcccaaattgactccacacttatcgatgtccacctctttctccttcattttaaagttctctt |
30442393 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #4
Raw Score: 155; E-Value: 4e-82
Query Start/End: Original strand, 166 - 365
Target Start/End: Complemental strand, 22009654 - 22009453
Alignment:
| Q |
166 |
atcatatcatacttatatctaatctttgttaacattgctaatgaaattgcaaactctaaacttaaatggttttggctccaaaacaagggaggccgttgga |
265 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||| |||||||| |||||| |||||||||||||||||||||||||||||||||||||| |
|
|
| T |
22009654 |
atcatatcatacttatatctaatctttgttaacattgctaatgaatttgcaaaccctaaacctaaatggttttggctccaaaacaagggaggccgttgga |
22009555 |
T |
|
| Q |
266 |
tctcatcatttggctaaccatgcatctcatcatttgatctaatccgagtcaaattttcaaatttgatgtatatttccta--cacttatccaaattttgac |
363 |
Q |
| |
|
||||||||||||||||| ||||||||||||| |||||||||||| |||||||| ||||||||||||||||||||||||| | ||||||||| ||||||| |
|
|
| T |
22009554 |
tctcatcatttggctaagcatgcatctcatcctttgatctaatctgagtcaaactttcaaatttgatgtatatttcctatgctcttatccaagttttgac |
22009455 |
T |
|
| Q |
364 |
tc |
365 |
Q |
| |
|
|| |
|
|
| T |
22009454 |
tc |
22009453 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #5
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 182 - 268
Target Start/End: Complemental strand, 26841074 - 26840988
Alignment:
| Q |
182 |
atctaatctttgttaacattgctaatgaaattgcaaactctaaacttaaatggttttggctccaaaacaagggaggccgttggatct |
268 |
Q |
| |
|
|||||||||||||||||||||||||||| |||||||| |||||| ||||||||||||||||||||||||||||| ||||||||||| |
|
|
| T |
26841074 |
atctaatctttgttaacattgctaatgattttgcaaaccctaaacctaaatggttttggctccaaaacaagggagaccgttggatct |
26840988 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #6
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 171 - 247
Target Start/End: Complemental strand, 19085498 - 19085422
Alignment:
| Q |
171 |
atcatacttatatctaatctttgttaacattgctaatgaaattgcaaactctaaacttaaatggttttggctccaaa |
247 |
Q |
| |
|
||||||||||||| ||||||||||||||||||||||||| |||||||| |||||| |||||||||||||||||||| |
|
|
| T |
19085498 |
atcatacttatatataatctttgttaacattgctaatgactttgcaaaccctaaacctaaatggttttggctccaaa |
19085422 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #7
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 177 - 308
Target Start/End: Complemental strand, 22004571 - 22004441
Alignment:
| Q |
177 |
cttatatctaatctttgttaacattgctaatgaaattgcaaactctaaacttaaatggttttggctccaaaacaagggaggccgttggatctcatcattt |
276 |
Q |
| |
|
||||||||||||||||||||||||||||||||| |||||||| |||||| || || |||| ||| || || ||||| | ||||||||||||||||||| |
|
|
| T |
22004571 |
cttatatctaatctttgttaacattgctaatgattttgcaaaccctaaacctagatagtttaggcgcc-aatcaaggtggtccgttggatctcatcattt |
22004473 |
T |
|
| Q |
277 |
ggctaaccatgcatctcatcatttgatctaat |
308 |
Q |
| |
|
|||| | ||| ||| ||||| ||||||||||| |
|
|
| T |
22004472 |
ggctcagcattcatatcatcctttgatctaat |
22004441 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #8
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 374 - 433
Target Start/End: Complemental strand, 19085241 - 19085182
Alignment:
| Q |
374 |
tcctccaattcctaaattgactccacacttatctatgtccacctctttctccttcatttt |
433 |
Q |
| |
|
|||||||||||| | |||||||||||||||||| || ||||||||||||||| |||||| |
|
|
| T |
19085241 |
tcctccaattcccatattgactccacacttatcgatacccacctctttctcctccatttt |
19085182 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #9
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 376 - 433
Target Start/End: Complemental strand, 22009455 - 22009398
Alignment:
| Q |
376 |
ctccaattcctaaattgactccacacttatctatgtccacctctttctccttcatttt |
433 |
Q |
| |
|
|||||||||| |||||||||||||||||||| ||| | |||| |||||||||| |||| |
|
|
| T |
22009455 |
ctccaattcccaaattgactccacacttatcgatgccaacctttttctccttcctttt |
22009398 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #10
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 170 - 207
Target Start/End: Complemental strand, 30463173 - 30463136
Alignment:
| Q |
170 |
tatcatacttatatctaatctttgttaacattgctaat |
207 |
Q |
| |
|
|||||||||||||||||||||||||||||| ||||||| |
|
|
| T |
30463173 |
tatcatacttatatctaatctttgttaacaatgctaat |
30463136 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #11
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 166 - 202
Target Start/End: Original strand, 19579530 - 19579566
Alignment:
| Q |
166 |
atcatatcatacttatatctaatctttgttaacattg |
202 |
Q |
| |
|
|||||||||||||||||||||||||| ||||||||| |
|
|
| T |
19579530 |
atcatatcatacttatatctaatcttaattaacattg |
19579566 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0596 (Bit Score: 215; Significance: 1e-118; HSPs: 1)
Name: scaffold0596
Description:
Target: scaffold0596; HSP #1
Raw Score: 215; E-Value: 1e-118
Query Start/End: Original strand, 165 - 443
Target Start/End: Original strand, 648 - 929
Alignment:
| Q |
165 |
catcatatcatacttatatctaatctttgttaacattgctaatgaaattgcaaactctaaacttaaatggttttggctccaaaacaagggaggccgttgg |
264 |
Q |
| |
|
||||||||||||||||||||| ||||||||||||||||||||||||||||||||| |||||| |||||||||||| |||||||| ||||||||||||||| |
|
|
| T |
648 |
catcatatcatacttatatctgatctttgttaacattgctaatgaaattgcaaaccctaaacctaaatggttttgactccaaaataagggaggccgttgg |
747 |
T |
|
| Q |
265 |
atctcatcatttggctaaccatgcatctcatcatttgatctaatccgagtcaaattttcaaatttgatgtatatttccta--cacttatccaaattttga |
362 |
Q |
| |
|
|||||||||||||||||| ||||||||||||| |||||||||||| |||||||||||||||||||||||||||||||||| |||||||||||||||||| |
|
|
| T |
748 |
atctcatcatttggctaagcatgcatctcatcctttgatctaatctgagtcaaattttcaaatttgatgtatatttcctatgcacttatccaaattttga |
847 |
T |
|
| Q |
363 |
ctcattaattatcctccaattcctaaattgactccacacttatctatgtccacctctttctccttca-ttttaagttctctt |
443 |
Q |
| |
|
||||||||||||| | ||||||| |||||||||||||||||||| |||||||||||||||||||||| |||||||||||||| |
|
|
| T |
848 |
ctcattaattatcattcaattcccaaattgactccacacttatcgatgtccacctctttctccttcatttttaagttctctt |
929 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3 (Bit Score: 215; Significance: 1e-118; HSPs: 12)
Name: chr3
Description:
Target: chr3; HSP #1
Raw Score: 215; E-Value: 1e-118
Query Start/End: Original strand, 170 - 433
Target Start/End: Complemental strand, 53973408 - 53973143
Alignment:
| Q |
170 |
tatcatacttatatctaatctttgttaacattgctaatgaaattgcaaactctaaacttaaatggttttggctccaaaacaagggaggccgttggatctc |
269 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||| |||||| |||||||||||||||||||| ||||||||||||||||||||| |
|
|
| T |
53973408 |
tatcatacttatatctaatctttgttaacattgctaatgaaattgcaaaccctaaacctaaatggttttggctccaaatcaagggaggccgttggatctc |
53973309 |
T |
|
| Q |
270 |
atcatttggctaaccatgcatctcatcatttgatctaatccgagtcaaattttcaaatttgatgtatatttccta--cacttatccaaattttgactcat |
367 |
Q |
| |
|
||||||||||||| | ||||||||||| |||||||||||| |||||||||||||||||||||||||||||||||| ||||||||||||||||||||||| |
|
|
| T |
53973308 |
atcatttggctaagcctgcatctcatcctttgatctaatctgagtcaaattttcaaatttgatgtatatttcctatgcacttatccaaattttgactcat |
53973209 |
T |
|
| Q |
368 |
taattatcctccaattcctaaattgactccacacttatctatgtccacctctttctccttcatttt |
433 |
Q |
| |
|
||||||||||||||||| |||||||||||||||||||| |||||||||||||||||||||||||| |
|
|
| T |
53973208 |
taattatcctccaattctcaaattgactccacacttatcgatgtccacctctttctccttcatttt |
53973143 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #2
Raw Score: 211; E-Value: 1e-115
Query Start/End: Original strand, 166 - 433
Target Start/End: Complemental strand, 19882236 - 19881968
Alignment:
| Q |
166 |
atcatatcatacttatatctaatctttgttaacattgctaatgaaattgcaaactctaaacttaaatggttttggctccaaaacaagggaggccgttgga |
265 |
Q |
| |
|
||||||||||| ||||||||||||||||||||||||||||||||||||| |||| |||||| ||||||||||||||||||||||||||||| |||||||| |
|
|
| T |
19882236 |
atcatatcata-ttatatctaatctttgttaacattgctaatgaaattgtaaaccctaaacctaaatggttttggctccaaaacaagggagaccgttgga |
19882138 |
T |
|
| Q |
266 |
tctcatcatttggctaaccatgcatctcatcatttgatctaatccgagtcaaattttcaaatttgatgtatatttccta--cacttatccaaattttgac |
363 |
Q |
| |
|
||||||||||||||||| ||||||||||||| |||||||||||| |||||||||||||||||||||||||||||||||| ||||||||||||||||||| |
|
|
| T |
19882137 |
tctcatcatttggctaagcatgcatctcatcctttgatctaatctgagtcaaattttcaaatttgatgtatatttcctatgcacttatccaaattttgac |
19882038 |
T |
|
| Q |
364 |
tcattaattatcctccaattcctaaattgactccacacttatctatgtccacctctttctccttcatttt |
433 |
Q |
| |
|
|||||||||||||||||||||| |||||||||||||| ||||| |||||||||||||||||||||||||| |
|
|
| T |
19882037 |
tcattaattatcctccaattcccaaattgactccacatttatcgatgtccacctctttctccttcatttt |
19881968 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #3
Raw Score: 206; E-Value: 1e-112
Query Start/End: Original strand, 171 - 443
Target Start/End: Original strand, 37982349 - 37982627
Alignment:
| Q |
171 |
atcatacttatatctaatctttgttaacattgctaatgaaattgcaaactctaaacttaaatggttttggctccaaaacaagggaggccgttggatctca |
270 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||||| |||||| ||||||||||||||||||||||||||||| ||||||||||||| |
|
|
| T |
37982349 |
atcatacttatatctaatctttgttaacattgctaatgaaattgcaaaccctaaacctaaatggttttggctccaaaacaagggagaccgttggatctca |
37982448 |
T |
|
| Q |
271 |
tcatttggctaaccatgcatctcatcatttgatctaatccgagtcaaattttcaaatttgatgtatatttccta--ca---cttatccaaattttgactc |
365 |
Q |
| |
|
|||||||||||| ||||||||||||| ||| |||||||| |||||||||||||||||||||||||||||||||| || ||||||||| ||||||||| |
|
|
| T |
37982449 |
tcatttggctaagcatgcatctcatcctttaatctaatctgagtcaaattttcaaatttgatgtatatttcctatgcacgtcttatccaagttttgactc |
37982548 |
T |
|
| Q |
366 |
attaattatcctccaattcctaaattgactccacacttatctatgtccacctctttctccttca-ttttaagttctctt |
443 |
Q |
| |
|
|||||||||||||||||||| |||||||||||||||||||| |||||||||||||||||||||| |||||||||||||| |
|
|
| T |
37982549 |
attaattatcctccaattcccaaattgactccacacttatcgatgtccacctctttctccttcatttttaagttctctt |
37982627 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #4
Raw Score: 190; E-Value: 1e-103
Query Start/End: Original strand, 171 - 433
Target Start/End: Original strand, 31685077 - 31685341
Alignment:
| Q |
171 |
atcatacttatatctaatctttgttaacattgctaatgaaattgcaaactctaaacttaaatggttttggctccaaaacaagggaggccgttggatctca |
270 |
Q |
| |
|
|||||||||||||||||||||| |||||||||||||||| |||||||| |||||| ||||||||||||||||||||| |||||||||||||| |||||| |
|
|
| T |
31685077 |
atcatacttatatctaatctttattaacattgctaatgactttgcaaaccctaaacctaaatggttttggctccaaaataagggaggccgttgaatctca |
31685176 |
T |
|
| Q |
271 |
tcatttggctaaccatgcatctcatcatttgatctaatccgagtcaaattttcaaatttgatgtatatttccta--cacttatccaaattttgactcatt |
368 |
Q |
| |
|
|||||||||||| ||||||||||||| |||||||||||| |||||||| ||||||||||||||||||||||||| ||||||| ||| |||||||||||| |
|
|
| T |
31685177 |
tcatttggctaagcatgcatctcatcctttgatctaatctgagtcaaactttcaaatttgatgtatatttcctatgcacttattcaagttttgactcatt |
31685276 |
T |
|
| Q |
369 |
aattatcctccaattcctaaattgactccacacttatctatgtccacctctttctccttcatttt |
433 |
Q |
| |
|
|||||||||||||||| |||||||||||||||||||| |||||||||||||||||||||||||| |
|
|
| T |
31685277 |
aattatcctccaattctcaaattgactccacacttatcgatgtccacctctttctccttcatttt |
31685341 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #5
Raw Score: 109; E-Value: 1e-54
Query Start/End: Original strand, 171 - 342
Target Start/End: Original strand, 17681767 - 17681938
Alignment:
| Q |
171 |
atcatacttatatctaatctttgttaacattgctaatgaaattgcaaactctaaacttaaatggttttggctccaaaacaagggaggccgttggatctca |
270 |
Q |
| |
|
|||||||||||||||||||||||||||||||| |||||| |||||||| |||||| ||||||||||||||||| ||||||||| ||||||||||||||| |
|
|
| T |
17681767 |
atcatacttatatctaatctttgttaacattgttaatgattttgcaaaccctaaacctaaatggttttggctcc-aaacaaggggggccgttggatctca |
17681865 |
T |
|
| Q |
271 |
tcatttggctaaccatgcatctcatcatttgatctaatc-cgagtcaaattttcaaatttgatgtatatttcc |
342 |
Q |
| |
|
|||||||| ||| ||||||||||||| |||||||||||| |||||||||||| |||||| |||||||||||| |
|
|
| T |
17681866 |
tcatttggttaagcatgcatctcatcctttgatctaatcttgagtcaaatttttaaatttaatgtatatttcc |
17681938 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #6
Raw Score: 95; E-Value: 3e-46
Query Start/End: Original strand, 170 - 308
Target Start/End: Complemental strand, 12538757 - 12538620
Alignment:
| Q |
170 |
tatcatacttatatctaatctttgttaacattgctaatgaaattgcaaactctaaacttaaatggttttggctccaaaacaagggaggccgttggatctc |
269 |
Q |
| |
|
||||||||||||||||||||||||||||| || ||||||| |||||||| |||||| ||||||||||||||||| |||||||||||||||||||||||| |
|
|
| T |
12538757 |
tatcatacttatatctaatctttgttaacctttctaatgattttgcaaaccctaaacctaaatggttttggctcc-aaacaagggaggccgttggatctc |
12538659 |
T |
|
| Q |
270 |
atcatttggctaaccatgcatctcatcatttgatctaat |
308 |
Q |
| |
|
||||||||||||| |||||||| |||| ||||||||||| |
|
|
| T |
12538658 |
atcatttggctaagcatgcatcacatcctttgatctaat |
12538620 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #7
Raw Score: 94; E-Value: 1e-45
Query Start/End: Original strand, 169 - 314
Target Start/End: Original strand, 2549935 - 2550079
Alignment:
| Q |
169 |
atatcatacttatatctaatctttgttaacattgctaatgaaattgcaaactctaaacttaaatggttttggctccaaaacaagggaggccgttggatct |
268 |
Q |
| |
|
||||||||||||||||||||||| |||||||||||||||| |||||||| |||||| |||||| |||||||||||||||||||||||||||||||||| |
|
|
| T |
2549935 |
atatcatacttatatctaatcttaattaacattgctaatgactttgcaaaccctaaacctaaatgattttggctccaaaacaagggaggccgttggatct |
2550034 |
T |
|
| Q |
269 |
catcatttggctaaccatgcatctcatcatttgatctaatccgagt |
314 |
Q |
| |
|
||||||||||||| ||||||||||||| |||||| ||||| |||| |
|
|
| T |
2550035 |
-atcatttggctaagcatgcatctcatcctttgatttaatctgagt |
2550079 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #8
Raw Score: 87; E-Value: 2e-41
Query Start/End: Original strand, 170 - 308
Target Start/End: Original strand, 24815914 - 24816052
Alignment:
| Q |
170 |
tatcatacttatatctaatctttgttaacattgctaatgaaattgcaaactctaaacttaaatggttttggctccaaaacaagggaggccgttggatctc |
269 |
Q |
| |
|
|||||||||||||||||||| || |||||||||||||||| |||||||| |||||| |||||||||||||||||||||| | | |||||||||||||| |
|
|
| T |
24815914 |
tatcatacttatatctaatccttcttaacattgctaatgactttgcaaaccctaaacctaaatggttttggctccaaaacgatgctggccgttggatctc |
24816013 |
T |
|
| Q |
270 |
atcatttggctaaccatgcatctcatcatttgatctaat |
308 |
Q |
| |
|
||||||||||| | ||||||||||||| ||||||||||| |
|
|
| T |
24816014 |
atcatttggctcagcatgcatctcatcctttgatctaat |
24816052 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #9
Raw Score: 86; E-Value: 6e-41
Query Start/End: Original strand, 171 - 308
Target Start/End: Complemental strand, 24762019 - 24761882
Alignment:
| Q |
171 |
atcatacttatatctaatctttgttaacattgctaatgaaattgcaaactctaaacttaaatggttttggctccaaaacaagggaggccgttggatctca |
270 |
Q |
| |
|
||||||||||||||||||| || |||||||||||||||| |||||||| |||||| |||||||||||||||||||||||| | | ||||||||||||| |
|
|
| T |
24762019 |
atcatacttatatctaatccttcttaacattgctaatgactttgcaaaccctaaacctaaatggttttggctccaaaacaatgctgaccgttggatctca |
24761920 |
T |
|
| Q |
271 |
tcatttggctaaccatgcatctcatcatttgatctaat |
308 |
Q |
| |
|
|||||||||| | ||||||||||||| ||||||||||| |
|
|
| T |
24761919 |
tcatttggctcagcatgcatctcatcctttgatctaat |
24761882 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #10
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 166 - 308
Target Start/End: Complemental strand, 53352887 - 53352745
Alignment:
| Q |
166 |
atcatatcatacttatatctaatctttgttaacattgctaatgaaattgcaaactctaaacttaaatggttttggctccaaaacaagggaggccgttgga |
265 |
Q |
| |
|
|||||||||||||||||||||||| || |||||||||||||||| ||||||||||||||| |||| ||||||||||||||||| | | | |||||||| |
|
|
| T |
53352887 |
atcatatcatacttatatctaatccttcttaacattgctaatgactttgcaaactctaaacctaaacggttttggctccaaaacgatgctgaccgttgga |
53352788 |
T |
|
| Q |
266 |
tctcatcatttggctaaccatgcatctcatcatttgatctaat |
308 |
Q |
| |
|
||||||||||||||| | ||||||||||| |||||| |||| |
|
|
| T |
53352787 |
tctcatcatttggctcagtgtgcatctcatcctttgatttaat |
53352745 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #11
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 170 - 308
Target Start/End: Complemental strand, 53027874 - 53027736
Alignment:
| Q |
170 |
tatcatacttatatctaatctttgttaacattgctaatgaaattgcaaactctaaacttaaatggttttggctccaaaacaagggaggccgttggatctc |
269 |
Q |
| |
|
|||||||||||||||||||| || |||||| ||||||| | || ||||| |||||| |||||||||||| |||||||| | | | |||||||||||| |
|
|
| T |
53027874 |
tatcatacttatatctaatccttcttaacactgctaataactttacaaaccctaaacctaaatggttttgactccaaaatgatgctgaccgttggatctc |
53027775 |
T |
|
| Q |
270 |
atcatttggctaaccatgcatctcatcatttgatctaat |
308 |
Q |
| |
|
||||||||||| | ||||||||||||| ||||||||||| |
|
|
| T |
53027774 |
atcatttggctcagcatgcatctcatcctttgatctaat |
53027736 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #12
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 170 - 199
Target Start/End: Complemental strand, 32015813 - 32015784
Alignment:
| Q |
170 |
tatcatacttatatctaatctttgttaaca |
199 |
Q |
| |
|
|||||||||||||||||||||||||||||| |
|
|
| T |
32015813 |
tatcatacttatatctaatctttgttaaca |
32015784 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8 (Bit Score: 202; Significance: 1e-110; HSPs: 9)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 202; E-Value: 1e-110
Query Start/End: Original strand, 166 - 443
Target Start/End: Original strand, 5657766 - 5658046
Alignment:
| Q |
166 |
atcatatcatacttatatctaatctttgttaacattgctaatgaaattgcaaactctaaacttaaatggttttggctccaaaacaagggaggccgttgga |
265 |
Q |
| |
|
||||||||||||||||||||||||||||||||| |||||||||| |||||||| |||||| ||||| |||||||||||||||||||||||||||||||| |
|
|
| T |
5657766 |
atcatatcatacttatatctaatctttgttaacgttgctaatgactttgcaaaccctaaacctaaatagttttggctccaaaacaagggaggccgttgga |
5657865 |
T |
|
| Q |
266 |
tctcatcatttggctaaccatgcatctcatcatttgatctaatccgagtcaaattttcaaatttgatgtatatttccta--cacttatccaaattttgac |
363 |
Q |
| |
|
||||||||||||| ||| ||||||||||||| |||||||||||| |||||||| ||||||||||||||||||||||||| ||||||||||| ||||||| |
|
|
| T |
5657866 |
tctcatcatttggttaagcatgcatctcatcctttgatctaatctgagtcaaactttcaaatttgatgtatatttcctatgcacttatccaagttttgac |
5657965 |
T |
|
| Q |
364 |
tcattaattatcctccaattcctaaattgactccacacttatctatgtccacctctttctccttca-ttttaagttctctt |
443 |
Q |
| |
|
|||||||||||||||||||||| |||||||||||||||||||| ||| |||||||||||||||||| |||||||||||||| |
|
|
| T |
5657966 |
tcattaattatcctccaattcccaaattgactccacacttatcgatgcccacctctttctccttcatttttaagttctctt |
5658046 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #2
Raw Score: 199; E-Value: 1e-108
Query Start/End: Original strand, 169 - 443
Target Start/End: Complemental strand, 14678144 - 14677868
Alignment:
| Q |
169 |
atatcatacttatatctaatctttgttaacattgctaatgaaattgcaaactctaaacttaaatggttttggctccaaaacaagggaggccgttggatct |
268 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||| ||| |||| |||||| ||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
14678144 |
atatcatacttatatctaatctttgttaacattgctaatgactttgaaaaccctaaacctaaatggttttggctccaaaacaagggaggccgttggatct |
14678045 |
T |
|
| Q |
269 |
catcatttggctaaccatgcatctcatcatttgatctaatccgagtcaaattttcaaatttgatgtatatttccta--cacttatccaaattttgactca |
366 |
Q |
| |
|
|||||||||||||| ||||||||||||| |||||||||||| |||||||| |||||||||| |||||||||||||| ||||||||||| |||||||||| |
|
|
| T |
14678044 |
catcatttggctaagcatgcatctcatcctttgatctaatctgagtcaaactttcaaatttaatgtatatttcctatgcacttatccaagttttgactca |
14677945 |
T |
|
| Q |
367 |
ttaattatcctccaattcctaaattgactccacacttatctatgtccacctctttctccttca-ttttaagttctctt |
443 |
Q |
| |
|
||||||||| ||||||||| |||||||||||||||||||| |||||||||||||||||||||| |||||||||||||| |
|
|
| T |
14677944 |
ttaattatcatccaattcccaaattgactccacacttatc-atgtccacctctttctccttcatttttaagttctctt |
14677868 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #3
Raw Score: 195; E-Value: 1e-106
Query Start/End: Original strand, 169 - 443
Target Start/End: Complemental strand, 31100995 - 31100718
Alignment:
| Q |
169 |
atatcatacttatatctaatctttgttaacattgctaatgaaattgcaaactctaaacttaaatggttttggctccaaaacaagggaggccgttggatct |
268 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||| ||||||| |||||| ||||||||||||||||||||||||||||||||||| ||||| |
|
|
| T |
31100995 |
atatcatacttatatctaatctttgttaacattgctaatgactttgcaaatcctaaacctaaatggttttggctccaaaacaagggaggccgttcgatct |
31100896 |
T |
|
| Q |
269 |
catcatttggctaaccatgcatctcatcatttgatctaatccgagtcaaattttcaaatttgatgtatatttccta--cacttatccaaattttgactca |
366 |
Q |
| |
|
|||||||||| ||| |||| |||||||| |||||||||||| |||||||| ||||||||||||||||||||||||| ||||||||||| |||||||||| |
|
|
| T |
31100895 |
catcatttggttaagcatgtatctcatcctttgatctaatctgagtcaaactttcaaatttgatgtatatttcctatgcacttatccaagttttgactca |
31100796 |
T |
|
| Q |
367 |
ttaattatcctccaattcctaaattgactccacacttatctatgtccacctctttctccttca-ttttaagttctctt |
443 |
Q |
| |
|
||||||||||||||||||| |||||||||||||||||||| ||| |||||||||||||||||| |||||||||||||| |
|
|
| T |
31100795 |
ttaattatcctccaattcccaaattgactccacacttatcgatgcccacctctttctccttcatttttaagttctctt |
31100718 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #4
Raw Score: 122; E-Value: 2e-62
Query Start/End: Original strand, 171 - 344
Target Start/End: Complemental strand, 27541679 - 27541507
Alignment:
| Q |
171 |
atcatacttatatctaatctttgttaacattgctaatgaaattgcaaactctaaacttaaatggttttggctccaaaacaagggaggccgttggatctca |
270 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||| |||||||| |||||| ||||||| |||||||||||| ||||||| |||||||||||||| |
|
|
| T |
27541679 |
atcatacttatatctaatctttgttaacattgctaatgactttgcaaaccctaaacctaaatggctttggctccaaa-caagggacgccgttggatctca |
27541581 |
T |
|
| Q |
271 |
tcatttggctaaccatgcatctcatcatttgatctaatccgagtcaaattttcaaatttgatgtatatttccta |
344 |
Q |
| |
|
|||||||||||| ||||||||||||| |||||||||||| || ||||| ||||||||||||||||||||||||| |
|
|
| T |
27541580 |
tcatttggctaagcatgcatctcatcctttgatctaatctgaatcaaactttcaaatttgatgtatatttccta |
27541507 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #5
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 171 - 246
Target Start/End: Original strand, 23738657 - 23738731
Alignment:
| Q |
171 |
atcatacttatatctaatctttgttaacattgctaatgaaattgcaaactctaaacttaaatggttttggctccaa |
246 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||| |||||||| |||| | |||| | |||||||||||| |
|
|
| T |
23738657 |
atcatacttatatctaatctttgttaacattgctaatgactttgcaaaccctaaccctaaa-gtttttggctccaa |
23738731 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #6
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 171 - 246
Target Start/End: Complemental strand, 24788154 - 24788079
Alignment:
| Q |
171 |
atcatacttatatctaatctttgttaacattgctaatgaaattgcaaactctaaacttaaatggttttggctccaa |
246 |
Q |
| |
|
||||||||||||||||||||| |||||||||||||||| |||||||| |||||| ||| | |||||||| |||| |
|
|
| T |
24788154 |
atcatacttatatctaatcttaattaacattgctaatgactttgcaaaccctaaacctaattagttttggcgccaa |
24788079 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #7
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 169 - 244
Target Start/End: Complemental strand, 33689417 - 33689343
Alignment:
| Q |
169 |
atatcatacttatatctaatctttgttaacattgctaatgaaattgcaaactctaaacttaaatggttttggctcc |
244 |
Q |
| |
|
||||||||| ||||||||||||||||||||||||||||||| ||||| || |||| |||||| | |||||||||| |
|
|
| T |
33689417 |
atatcatacctatatctaatctttgttaacattgctaatgactttgcagaccctaaccttaaa-gtttttggctcc |
33689343 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #8
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 374 - 431
Target Start/End: Complemental strand, 33689215 - 33689158
Alignment:
| Q |
374 |
tcctccaattcctaaattgactccacacttatctatgtccacctctttctccttcatt |
431 |
Q |
| |
|
|||||||||| | | |||||||||||||||||| || |||||||||||||||||||| |
|
|
| T |
33689215 |
tcctccaatttccatattgactccacacttatccatacccacctctttctccttcatt |
33689158 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #9
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 171 - 207
Target Start/End: Original strand, 8158461 - 8158497
Alignment:
| Q |
171 |
atcatacttatatctaatctttgttaacattgctaat |
207 |
Q |
| |
|
|||||||||||||||||| |||||||||| ||||||| |
|
|
| T |
8158461 |
atcatacttatatctaatttttgttaacaatgctaat |
8158497 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6 (Bit Score: 198; Significance: 1e-108; HSPs: 8)
Name: chr6
Description:
Target: chr6; HSP #1
Raw Score: 198; E-Value: 1e-108
Query Start/End: Original strand, 178 - 443
Target Start/End: Complemental strand, 33045545 - 33045277
Alignment:
| Q |
178 |
ttatatctaatctttgttaacattgctaatgaaattgcaaactctaaacttaaatggttttggctccaaaacaagggaggccgttggatctcatcatttg |
277 |
Q |
| |
|
|||||||||||||||||||||||||||||||| |||||||| |||||| ||||||||||||||||||||| |||||||||||||||||||||||||||| |
|
|
| T |
33045545 |
ttatatctaatctttgttaacattgctaatgactttgcaaaccctaaacctaaatggttttggctccaaaataagggaggccgttggatctcatcatttg |
33045446 |
T |
|
| Q |
278 |
gctaaccatgcatctcatcatttgatctaatccgagtcaaattttcaaatttgatgtatatttccta--cacttatccaaattttgactcattaattatc |
375 |
Q |
| |
|
| ||| ||||||||||||| |||||||||||| |||||||| ||||||||||||||||||||||||| ||||||||||| ||||||||||||||||||| |
|
|
| T |
33045445 |
gttaagcatgcatctcatcctttgatctaatctgagtcaaactttcaaatttgatgtatatttcctatgcacttatccaagttttgactcattaattatc |
33045346 |
T |
|
| Q |
376 |
ctccaattcctaaattgactccacacttatctatgtccacctctttctccttca-ttttaagttctctt |
443 |
Q |
| |
|
|||||||||| |||||||||||||||||||| |||||||||||||||||||||| |||||||||||||| |
|
|
| T |
33045345 |
ctccaattcccaaattgactccacacttatcgatgtccacctctttctccttcatttttaagttctctt |
33045277 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #2
Raw Score: 146; E-Value: 1e-76
Query Start/End: Original strand, 166 - 442
Target Start/End: Original strand, 10092507 - 10092772
Alignment:
| Q |
166 |
atcatatcatacttatatctaatctttgttaacattgctaatgaaattgcaaactctaaacttaaatggttttggctccaaaacaagggaggccgttgga |
265 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||| |||||| |||||||| ||||| |||||||||||||||||||||||||||||||||||||| |
|
|
| T |
10092507 |
atcatatcatacttatatctaatctttgttaacattgttaatgactttgcaaaccctaaatctaaatggttttggctccaaaacaagggaggccgttgga |
10092606 |
T |
|
| Q |
266 |
tctcatcatttggctaaccatgcatctcatcatttgatctaatccgagtcaaattttcaaatttgatgtatatttccta--cacttatccaaattttgac |
363 |
Q |
| |
|
||||||||||||||||| |||||||||||| || ||||| ||||||||||||||||||||||||| ||| ||||||| |||||| |
|
|
| T |
10092607 |
tctcatcatttggctaagcatgcatctcattctt--------------tcaaactttcaaatttgatgtatatttcctatgcacctatccaagttttgat |
10092692 |
T |
|
| Q |
364 |
tcattaattatcctccaattcctaaattgactccacacttatctatgtccacctctttctccttca-ttttaagttctct |
442 |
Q |
| |
|
|||||| ||||||||||||| | |||||||||||||||||||| |||||||||||||||||||||| ||||||||||||| |
|
|
| T |
10092693 |
tcattagttatcctccaatttccaaattgactccacacttatcgatgtccacctctttctccttcatttttaagttctct |
10092772 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #3
Raw Score: 88; E-Value: 4e-42
Query Start/End: Original strand, 178 - 309
Target Start/End: Original strand, 8976411 - 8976542
Alignment:
| Q |
178 |
ttatatctaatctttgttaacattgctaatgaaattgcaaactctaaacttaaatggttttggctccaaaacaagggaggccgttggatctcatcatttg |
277 |
Q |
| |
|
|||||||||||||||||||| ||||||||||| || |||||||||||| ||||||||||||||||||||| ||||||| |||||||||||||| |||| |
|
|
| T |
8976411 |
ttatatctaatctttgttaatattgctaatgactttacaaactctaaacctaaatggttttggctccaaaataagggagaccgttggatctcattattta |
8976510 |
T |
|
| Q |
278 |
gctaaccatgcatctcatcatttgatctaatc |
309 |
Q |
| |
|
||||| ||||||||||||| |||||||||||| |
|
|
| T |
8976511 |
gctaaacatgcatctcatcctttgatctaatc |
8976542 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #4
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 171 - 282
Target Start/End: Original strand, 3065698 - 3065808
Alignment:
| Q |
171 |
atcatacttatatctaatctttgttaacattgctaatgaaattgcaaactctaaacttaaatggttttggctccaaaacaagggaggccgttggatctca |
270 |
Q |
| |
|
|||||||||||||||||||||||||||||| |||||||| |||||||| |||||| ||||||||||||||||| ||||||||||| ||||||||||||| |
|
|
| T |
3065698 |
atcatacttatatctaatctttgttaacatggctaatgactttgcaaaccctaaacctaaatggttttggctcc-aaacaagggagaccgttggatctca |
3065796 |
T |
|
| Q |
271 |
tcatttggctaa |
282 |
Q |
| |
|
|||||||||||| |
|
|
| T |
3065797 |
tcatttggctaa |
3065808 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #5
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 171 - 247
Target Start/End: Original strand, 16246702 - 16246778
Alignment:
| Q |
171 |
atcatacttatatctaatctttgttaacattgctaatgaaattgcaaactctaaacttaaatggttttggctccaaa |
247 |
Q |
| |
|
|||||||||||||||||||||||| |||||||||||||| |||||||| |||| | |||||||||||||||||||| |
|
|
| T |
16246702 |
atcatacttatatctaatctttgtgaacattgctaatgactttgcaaaccctaatcctaaatggttttggctccaaa |
16246778 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #6
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 169 - 247
Target Start/End: Complemental strand, 30908493 - 30908414
Alignment:
| Q |
169 |
atatcatactt-atatctaatctttgttaacattgctaatgaaattgcaaactctaaacttaaatggttttggctccaaa |
247 |
Q |
| |
|
||||||||||| |||||||||||||||||||||||||||||| |||||||| ||||| |||||||||||||||||||| |
|
|
| T |
30908493 |
atatcatactttatatctaatctttgttaacattgctaatgactttgcaaaccctaaatctaaatggttttggctccaaa |
30908414 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #7
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 172 - 246
Target Start/End: Complemental strand, 4660295 - 4660222
Alignment:
| Q |
172 |
tcatacttatatctaatctttgttaacattgctaatgaaattgcaaactctaaacttaaatggttttggctccaa |
246 |
Q |
| |
|
|||||||||||| ||||||||||||||||||||||||| |||||||| |||| | |||| | |||||||||||| |
|
|
| T |
4660295 |
tcatacttatatataatctttgttaacattgctaatgactttgcaaaccctaaccctaaa-gtttttggctccaa |
4660222 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #8
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 374 - 433
Target Start/End: Complemental strand, 30908233 - 30908174
Alignment:
| Q |
374 |
tcctccaattcctaaattgactccacacttatctatgtccacctctttctccttcatttt |
433 |
Q |
| |
|
||||||||||| | |||||||||||||||||| || ||||||||||||||| |||||| |
|
|
| T |
30908233 |
tcctccaattctcatattgactccacacttatcgatacccacctctttctcctccatttt |
30908174 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0035 (Bit Score: 195; Significance: 1e-106; HSPs: 1)
Name: scaffold0035
Description:
Target: scaffold0035; HSP #1
Raw Score: 195; E-Value: 1e-106
Query Start/End: Original strand, 171 - 441
Target Start/End: Original strand, 35063 - 35336
Alignment:
| Q |
171 |
atcatacttatatctaatctttgttaacattgctaatgaaattgcaaactctaaacttaaatggttttggctccaaaacaagggaggccgttggatctca |
270 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||| |||||||| |||||| |||||||||||||||||||||||||||||| ||||||||||| |
|
|
| T |
35063 |
atcatacttatatctaatctttgttaacattgctaatgactttgcaaaccctaaacctaaatggttttggctccaaaacaagggaggttgttggatctca |
35162 |
T |
|
| Q |
271 |
tcatttggctaaccatgcatctcatcatttgatctaatccgagtcaaattttcaaatttgatgtatatttccta--cacttatccaaattttgactcatt |
368 |
Q |
| |
|
|||||||||||| ||||||||||||| |||||||||||| |||||||| ||||||||||||||||||||||||| ||||||||||| |||||||||||| |
|
|
| T |
35163 |
tcatttggctaagcatgcatctcatcctttgatctaatctgagtcaaactttcaaatttgatgtatatttcctatgcacttatccaagttttgactcatt |
35262 |
T |
|
| Q |
369 |
aattatcctccaattcctaaattgactccacacttatctatgtccacctctttctccttca-ttttaagttctc |
441 |
Q |
| |
|
||||||||||||||||| ||||| |||||||||||||| |||||||||| ||||||||||| |||||||||||| |
|
|
| T |
35263 |
aattatcctccaattcccaaattaactccacacttatcgatgtccacctttttctccttcatttttaagttctc |
35336 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4 (Bit Score: 194; Significance: 1e-105; HSPs: 2)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 194; E-Value: 1e-105
Query Start/End: Original strand, 171 - 433
Target Start/End: Complemental strand, 29863482 - 29863218
Alignment:
| Q |
171 |
atcatacttatatctaatctttgttaacattgctaatgaaattgcaaactctaaacttaaatggttttggctccaaaacaagggaggccgttggatctca |
270 |
Q |
| |
|
|||||||||||||||||||||||||||||||||| |||| |||||||| ||||| ||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
29863482 |
atcatacttatatctaatctttgttaacattgctcatgactttgcaaaccgtaaacctaaatggttttggctccaaaacaagggaggccgttggatctca |
29863383 |
T |
|
| Q |
271 |
tcatttggctaaccatgcatctcatcatttgatctaatccgagtcaaattttcaaatttgatgtatatttccta--cacttatccaaattttgactcatt |
368 |
Q |
| |
|
|||||||||| | ||||||||||||| |||||||||||| |||||||| |||||||||||||||||||||| || ||||||||||| |||||||||||| |
|
|
| T |
29863382 |
tcatttggctgagcatgcatctcatcctttgatctaatctgagtcaaactttcaaatttgatgtatatttcttatgcacttatccaagttttgactcatt |
29863283 |
T |
|
| Q |
369 |
aattatcctccaattcctaaattgactccacacttatctatgtccacctctttctccttcatttt |
433 |
Q |
| |
|
||||||||||||||||| |||||||||||||||||||| |||||||||||||||||||||||||| |
|
|
| T |
29863282 |
aattatcctccaattcccaaattgactccacacttatcgatgtccacctctttctccttcatttt |
29863218 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #2
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 171 - 232
Target Start/End: Original strand, 12506436 - 12506497
Alignment:
| Q |
171 |
atcatacttatatctaatctttgttaacattgctaatgaaattgcaaactctaaacttaaat |
232 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||| ||||||| |||||| ||||| |
|
|
| T |
12506436 |
atcatacttatatctaatctttgttaacattgctaatgactttgcaaatcctaaacctaaat |
12506497 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0045 (Bit Score: 186; Significance: 1e-100; HSPs: 1)
Name: scaffold0045
Description:
Target: scaffold0045; HSP #1
Raw Score: 186; E-Value: 1e-100
Query Start/End: Original strand, 170 - 443
Target Start/End: Complemental strand, 11756 - 11480
Alignment:
| Q |
170 |
tatcatacttatatctaatctttgttaacattgctaatgaaattgcaaactctaaacttaaatggttttggctccaaaacaagggaggccgttggatctc |
269 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||| |||||||| |||||| ||| |||||||| ||||||||||||||||||||||||||||| |
|
|
| T |
11756 |
tatcatacttatatctaatctttgttaacattgctaatgactttgcaaaccctaaacctaactggttttgactccaaaacaagggaggccgttggatctc |
11657 |
T |
|
| Q |
270 |
atcatttggctaaccatgcatctcatcatttgatctaatccgagtcaaattttcaaatttgatgtatatttccta--cacttatccaaattttgactcat |
367 |
Q |
| |
|
||||||||| ||| ||||||||||||| |||||| ||||| |||||||| ||||||||||||||||||||||||| ||||||||||| ||||||||||| |
|
|
| T |
11656 |
atcatttggttaagcatgcatctcatcctttgatttaatctgagtcaaactttcaaatttgatgtatatttcctatgcacttatccaagttttgactcat |
11557 |
T |
|
| Q |
368 |
taattatcctccaattcctaaattgactccacacttatctatgtccacctctttctccttca-ttttaagttctctt |
443 |
Q |
| |
|
| |||||||||||||||| ||||||||||||||||||| ||| |||||||||||||||||| |||||||||||||| |
|
|
| T |
11556 |
tcattatcctccaattcccaaattgactccacacttattgatgcccacctctttctccttcatttttaagttctctt |
11480 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0096 (Bit Score: 106; Significance: 7e-53; HSPs: 1)
Name: scaffold0096
Description:
Target: scaffold0096; HSP #1
Raw Score: 106; E-Value: 7e-53
Query Start/End: Original strand, 171 - 308
Target Start/End: Original strand, 27410 - 27546
Alignment:
| Q |
171 |
atcatacttatatctaatctttgttaacattgctaatgaaattgcaaactctaaacttaaatggttttggctccaaaacaagggaggccgttggatctca |
270 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||| |||||||| |||||| ||||||||||||||||| ||||||||||||||||||||||||| |
|
|
| T |
27410 |
atcatacttatatctaatctttgttaacattgctaatgattttgcaaaccctaaacctaaatggttttggctcc-aaacaagggaggccgttggatctca |
27508 |
T |
|
| Q |
271 |
tcatttggctaaccatgcatctcatcatttgatctaat |
308 |
Q |
| |
|
|||||||||||| ||||||||||||| ||||||||||| |
|
|
| T |
27509 |
tcatttggctaagcatgcatctcatcctttgatctaat |
27546 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1 (Bit Score: 54; Significance: 8e-22; HSPs: 2)
Name: chr1
Description:
Target: chr1; HSP #1
Raw Score: 54; E-Value: 8e-22
Query Start/End: Original strand, 166 - 247
Target Start/End: Original strand, 50990902 - 50990983
Alignment:
| Q |
166 |
atcatatcatacttatatctaatctttgttaacattgctaatgaaattgcaaactctaaacttaaatggttttggctccaaa |
247 |
Q |
| |
|
|||||||| |||||||||||||||||||||||||||||| || | |||||||| |||||| |||||||||||||||||||| |
|
|
| T |
50990902 |
atcatatcttacttatatctaatctttgttaacattgctgataactttgcaaaccctaaacctaaatggttttggctccaaa |
50990983 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #2
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 171 - 207
Target Start/End: Original strand, 25223219 - 25223255
Alignment:
| Q |
171 |
atcatacttatatctaatctttgttaacattgctaat |
207 |
Q |
| |
|
||||||||||||||||||||||||||||| ||||||| |
|
|
| T |
25223219 |
atcatacttatatctaatctttgttaacaatgctaat |
25223255 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0157 (Bit Score: 42; Significance: 0.00000000000001; HSPs: 1)
Name: scaffold0157
Description:
Target: scaffold0157; HSP #1
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 171 - 232
Target Start/End: Complemental strand, 14041 - 13980
Alignment:
| Q |
171 |
atcatacttatatctaatctttgttaacattgctaatgaaattgcaaactctaaacttaaat |
232 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||| ||||||| |||||| ||||| |
|
|
| T |
14041 |
atcatacttatatctaatctttgttaacattgctaatgactttgcaaatcctaaacctaaat |
13980 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0475 (Bit Score: 31; Significance: 0.00000004; HSPs: 1)
Name: scaffold0475
Description:
Target: scaffold0475; HSP #1
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 180 - 246
Target Start/End: Complemental strand, 7585 - 7520
Alignment:
| Q |
180 |
atatctaatctttgttaacattgctaatgaaattgcaaactctaaacttaaatggttttggctccaa |
246 |
Q |
| |
|
|||| ||||||||||||||||||||||||| |||||||| |||| | |||| | |||||||||||| |
|
|
| T |
7585 |
atatataatctttgttaacattgctaatgactttgcaaaccctaaccctaaa-gtttttggctccaa |
7520 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
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