View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF10179_low_34 (Length: 342)
Name: NF10179_low_34
Description: NF10179
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF10179_low_34 |
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Alignment Details
Target: chr7 (Bit Score: 255; Significance: 1e-142; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 255; E-Value: 1e-142
Query Start/End: Original strand, 1 - 326
Target Start/End: Original strand, 4224864 - 4225190
Alignment:
| Q |
1 |
agatgttgtaaatcttgccacgattttcaaatgggtgaaactcatgaatttcttttgatttgattaccccattagatggtttccttatacaaatagcttt |
100 |
Q |
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| T |
4224864 |
agatgttgtaaatcttgtctcgattttcaaatgggtgaaactcatgaatttcttttgatttgattaccccattagatagtttccttatacaaatagcttt |
4224963 |
T |
|
| Q |
101 |
tgtcgagtctcatgatttcttattggcgttgtcgtaagcttctctttgaacttctgaaaacattcgtcacacttcacaatgcatatgagaacttgatcta |
200 |
Q |
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| T |
4224964 |
tgtcgagtctcatgatttcttattggcgttgtcgtaagcttatttttgaacttctgaaaacattcgtcacatttcacaatccatacgaggacttgatcta |
4225063 |
T |
|
| Q |
201 |
ttataatcaaacaagtcaaaggcaatgcaaaatt-aaagaatgatttaatgattcttcaataataaccttccaaatccaagaactctttatttcgacgat |
299 |
Q |
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|||||||||||| |||||||||||||||||| || ||||||| |||| |||||||||||||||||||||||||||||||||||||||||||||| ||||| |
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| T |
4225064 |
ttataatcaaacgagtcaaaggcaatgcaaacttaaaagaatcatttgatgattcttcaataataaccttccaaatccaagaactctttatttcaacgat |
4225163 |
T |
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| Q |
300 |
agtcttcaacatattcgaatgttgaac |
326 |
Q |
| |
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|||||||||||| ||| |||||||||| |
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| T |
4225164 |
agtcttcaacatcttcaaatgttgaac |
4225190 |
T |
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