View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF10179_low_36 (Length: 337)
Name: NF10179_low_36
Description: NF10179
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF10179_low_36 |
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Alignment Details
Target: chr3 (Bit Score: 219; Significance: 1e-120; HSPs: 1)
Name: chr3
Description:
Target: chr3; HSP #1
Raw Score: 219; E-Value: 1e-120
Query Start/End: Original strand, 1 - 231
Target Start/End: Original strand, 41675928 - 41676158
Alignment:
| Q |
1 |
taagaccggtggcctggcagatgtttgtggttctttgccaatagcactggcgggtcgcggacaccgtgttatggttatctctcctagatacatacatggt |
100 |
Q |
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| T |
41675928 |
taagaccggtggccttgcagatgtttgtggttctttgccaatagcactggcgggtcgcggccaccgtgttatggttatctctcctagatacatacatggt |
41676027 |
T |
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| Q |
101 |
actgccgctgatagtaagttttctggcgcagttgatcttggtagccctatcaatgtattttgctttggaggcgcgcaagaagttggttttttccatgagt |
200 |
Q |
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|||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
41676028 |
actgccgctgatagtaagttttctggtgcagttgatcttggtagccctatcaatgtattttgctttggaggcgcgcaagaagttggttttttccatgagt |
41676127 |
T |
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| Q |
201 |
atagagaaggtgttgattgggtgagtacttc |
231 |
Q |
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||||||||||||||||||||||||||||||| |
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| T |
41676128 |
atagagaaggtgttgattgggtgagtacttc |
41676158 |
T |
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