View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF10179_low_50 (Length: 297)
Name: NF10179_low_50
Description: NF10179
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF10179_low_50 |
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Alignment Details
Target: chr3 (Bit Score: 288; Significance: 1e-161; HSPs: 1)
Name: chr3
Description:
Target: chr3; HSP #1
Raw Score: 288; E-Value: 1e-161
Query Start/End: Original strand, 1 - 292
Target Start/End: Original strand, 47583024 - 47583315
Alignment:
| Q |
1 |
aacatgttaatgctgaaaatctgaatgaaagattagttttgtctatgctcaaaggagtgaaattccttgatgtgacggagctttaaaacaccaataattg |
100 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
47583024 |
aacatgttaatgctgaaaatctgaatgaaagattagttttgtctatgctcaaaggagtgaaattccttgatgtgacggagctttaaaacaccaataattg |
47583123 |
T |
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| Q |
101 |
attaaaatattgtctatcatgttctcattatttcattcttagtttcttgaacttttgtaattgagaaaaaccaagttttacaattgtatttgtcaagggc |
200 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
47583124 |
attaaaatattgtctatcatgttctcattatttcattcttagtttcttgaacttttgtaattgagaaaaaccaagttttacaattgtatttgtcaagggc |
47583223 |
T |
|
| Q |
201 |
ttttataatttaatacagcattagtttctaaatctaattgagatttagtttcatgaagttggcagtttgaaaattgtttgtttcttctctct |
292 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| |
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| T |
47583224 |
ttttataatttaatacagcattagtttctaaatctaattgagatttagtttcatgaagttggcagtttgaaaattgtttgtttcttgtctct |
47583315 |
T |
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