View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF10179_low_63 (Length: 279)
Name: NF10179_low_63
Description: NF10179
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF10179_low_63 |
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Alignment Details
Target: chr4 (Bit Score: 230; Significance: 1e-127; HSPs: 1)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 230; E-Value: 1e-127
Query Start/End: Original strand, 1 - 261
Target Start/End: Complemental strand, 45791006 - 45790739
Alignment:
| Q |
1 |
tagaaaatgtaatgcattggctgtaacttctagagtatatcagttacaa-------tgtaatgcattcaaaaccaagtttgtttgattgtgttaaatata |
93 |
Q |
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| T |
45791006 |
tagaaaatgtaatgcattggctgtaacttctagagtatatcagttacaacttacaatgtaatgcattcaaaaccaagtttgtttgattgtgttaaatata |
45790907 |
T |
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| Q |
94 |
atgctttggaaatcaagttgaagtttccaactttttaggaattttcaccagcatgttaatttcaaagtaaaattgatttcttgaccgaaaagtaaactga |
193 |
Q |
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|||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| | |
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| T |
45790906 |
atgcattggaaatcaagttgaagtttccaactttttaggaattttcaccagcatgttaatttcaaagtaaaattgatttcttgaccgaaaagtaaactaa |
45790807 |
T |
|
| Q |
194 |
cttttgcatcaaaacaaagaactactattccattaaatgtgtacacacaaaaatactctcatcatttg |
261 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||| |
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| T |
45790806 |
cttttgcatcaaaacaaagaactactattccattaaatgtgtacagacaaaaatactctcatcatttg |
45790739 |
T |
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