View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF10179_low_74 (Length: 263)

Name: NF10179_low_74
Description: NF10179
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF10179_low_74
NF10179_low_74
[»] chr4 (53 HSPs)
chr4 (1-263)||(26187928-26188190)
chr4 (70-194)||(55073787-55073912)
chr4 (18-241)||(43477301-43477522)
chr4 (69-144)||(15225805-15225880)
chr4 (2-51)||(15805093-15805142)
chr4 (80-144)||(26034839-26034903)
chr4 (6-53)||(6943378-6943425)
chr4 (69-144)||(14898995-14899070)
chr4 (73-144)||(34561068-34561139)
chr4 (69-143)||(12488438-12488512)
chr4 (62-128)||(47575295-47575361)
chr4 (67-144)||(13521364-13521441)
chr4 (80-144)||(3997441-3997505)
chr4 (80-144)||(7902490-7902554)
chr4 (80-144)||(9185063-9185127)
chr4 (80-144)||(9190928-9190992)
chr4 (69-144)||(14868447-14868522)
chr4 (69-144)||(14877412-14877487)
chr4 (69-127)||(14953451-14953509)
chr4 (62-128)||(31297890-31297956)
chr4 (75-125)||(32545529-32545579)
chr4 (152-232)||(13521301-13521382)
chr4 (70-143)||(15011196-15011269)
chr4 (152-232)||(41817492-41817573)
chr4 (152-200)||(7902460-7902508)
chr4 (6-53)||(13065254-13065301)
chr4 (6-53)||(39216536-39216583)
chr4 (67-126)||(52742621-52742680)
chr4 (69-143)||(10713580-10713654)
chr4 (69-143)||(10927350-10927424)
chr4 (69-127)||(25690634-25690692)
chr4 (18-52)||(33462814-33462848)
chr4 (152-232)||(34561121-34561202)
chr4 (184-236)||(9185006-9185058)
chr4 (82-122)||(15539572-15539612)
chr4 (162-237)||(52742535-52742611)
chr4 (86-152)||(1150729-1150796)
chr4 (14-53)||(12875024-12875063)
chr4 (2-53)||(30054513-30054564)
chr4 (18-53)||(42758305-42758340)
chr4 (18-52)||(8029792-8029826)
chr4 (18-52)||(31269636-31269670)
chr4 (163-232)||(31297810-31297880)
chr4 (18-52)||(33468453-33468487)
chr4 (18-52)||(37259314-37259348)
chr4 (80-126)||(39320213-39320259)
chr4 (157-232)||(47575363-47575440)
chr4 (9-53)||(2820407-2820451)
chr4 (101-152)||(3309918-3309970)
chr4 (80-144)||(8660782-8660846)
chr4 (184-236)||(9190871-9190923)
chr4 (184-232)||(15225885-15225933)
chr4 (96-144)||(41817462-41817510)
[»] chr7 (65 HSPs)
chr7 (4-231)||(10532128-10532354)
chr7 (2-231)||(13343724-13343955)
chr7 (2-152)||(9008728-9008881)
chr7 (2-128)||(10499499-10499627)
chr7 (2-128)||(10504528-10504656)
chr7 (6-53)||(26286594-26286641)
chr7 (80-144)||(8954646-8954710)
chr7 (6-53)||(3285098-3285145)
chr7 (6-53)||(10387807-10387854)
chr7 (6-53)||(10392545-10392592)
chr7 (73-144)||(27256881-27256952)
chr7 (86-144)||(845987-846045)
chr7 (86-144)||(853364-853422)
chr7 (86-144)||(1211368-1211426)
chr7 (62-144)||(8076683-8076765)
chr7 (87-152)||(15566033-15566099)
chr7 (69-143)||(18426567-18426641)
chr7 (67-144)||(9650339-9650416)
chr7 (80-144)||(838811-838875)
chr7 (80-144)||(1203991-1204055)
chr7 (89-152)||(11297413-11297477)
chr7 (80-144)||(19096906-19096970)
chr7 (67-126)||(2629294-2629353)
chr7 (134-200)||(7838761-7838828)
chr7 (80-143)||(45169311-45169374)
chr7 (141-200)||(47552628-47552687)
chr7 (90-144)||(1043880-1043934)
chr7 (166-232)||(11017399-11017465)
chr7 (69-143)||(14259646-14259720)
chr7 (69-143)||(20488588-20488662)
chr7 (152-232)||(9650276-9650357)
chr7 (95-179)||(13337388-13337470)
chr7 (87-144)||(19640957-19641014)
chr7 (152-232)||(27256934-27257015)
chr7 (80-128)||(36477621-36477669)
chr7 (80-144)||(40864742-40864806)
chr7 (6-53)||(3046168-3046215)
chr7 (69-128)||(20485227-20485286)
chr7 (6-53)||(21671792-21671839)
chr7 (18-52)||(8268907-8268941)
chr7 (163-232)||(10488613-10488683)
chr7 (86-128)||(11017476-11017518)
chr7 (69-143)||(16459761-16459835)
chr7 (86-144)||(18385145-18385203)
chr7 (95-179)||(13345293-13345375)
chr7 (2-47)||(15973347-15973392)
chr7 (80-116)||(29727211-29727247)
chr7 (152-226)||(15565611-15565686)
chr7 (163-201)||(1043927-1043965)
chr7 (18-52)||(4930833-4930867)
chr7 (152-232)||(8076747-8076829)
chr7 (165-231)||(10499415-10499481)
chr7 (165-231)||(10504444-10504510)
chr7 (163-197)||(11297461-11297495)
chr7 (69-143)||(14928016-14928090)
chr7 (69-143)||(15351482-15351556)
chr7 (18-52)||(27238762-27238796)
chr7 (152-229)||(40864682-40864760)
chr7 (18-52)||(42626038-42626072)
chr7 (23-56)||(6590469-6590502)
chr7 (95-128)||(13337984-13338017)
chr7 (163-232)||(14927953-14928022)
chr7 (163-232)||(15351419-15351488)
chr7 (163-232)||(29727117-29727186)
chr7 (18-50)||(4580113-4580145)
[»] chr3 (66 HSPs)
chr3 (2-232)||(35456234-35456462)
chr3 (88-200)||(47540841-47540954)
chr3 (69-232)||(11997301-11997460)
chr3 (102-200)||(47541257-47541356)
chr3 (62-144)||(8070312-8070394)
chr3 (70-152)||(6595763-6595846)
chr3 (62-144)||(3034276-3034358)
chr3 (62-144)||(3673219-3673301)
chr3 (62-144)||(3693251-3693333)
chr3 (62-144)||(8888563-8888645)
chr3 (88-152)||(16023191-16023256)
chr3 (2-46)||(28125701-28125745)
chr3 (69-143)||(9706971-9707045)
chr3 (63-152)||(12899113-12899203)
chr3 (69-143)||(16749300-16749374)
chr3 (69-143)||(19776525-19776599)
chr3 (90-188)||(47540466-47540562)
chr3 (87-144)||(8197110-8197167)
chr3 (87-144)||(8223593-8223650)
chr3 (80-144)||(10585569-10585633)
chr3 (152-242)||(3673283-3673374)
chr3 (152-242)||(3693315-3693406)
chr3 (10-49)||(11399964-11400003)
chr3 (80-143)||(37438940-37439003)
chr3 (62-144)||(8883803-8883885)
chr3 (87-144)||(29886-29943)
chr3 (152-232)||(3034340-3034421)
chr3 (163-232)||(6595710-6595779)
chr3 (152-232)||(8070376-8070457)
chr3 (152-232)||(8883867-8883948)
chr3 (152-232)||(8888627-8888708)
chr3 (90-197)||(18012001-18012110)
chr3 (87-144)||(18350154-18350211)
chr3 (82-143)||(49020106-49020167)
chr3 (9-53)||(10708153-10708197)
chr3 (80-144)||(14425222-14425286)
chr3 (80-143)||(8488771-8488834)
chr3 (2-53)||(17025554-17025605)
chr3 (87-138)||(51922992-51923043)
chr3 (81-127)||(4106722-4106768)
chr3 (81-127)||(4110574-4110620)
chr3 (81-127)||(15965707-15965753)
chr3 (81-127)||(15969631-15969677)
chr3 (81-127)||(15973555-15973601)
chr3 (69-143)||(22758560-22758634)
chr3 (152-200)||(10585539-10585587)
chr3 (80-144)||(45903924-45903988)
chr3 (18-53)||(12965336-12965371)
chr3 (181-232)||(14425169-14425220)
chr3 (167-237)||(53502447-53502518)
chr3 (18-52)||(7570666-7570700)
chr3 (18-52)||(23660914-23660948)
chr3 (18-52)||(23665573-23665607)
chr3 (18-52)||(24037821-24037855)
chr3 (2-48)||(25726231-25726277)
chr3 (18-52)||(46964623-46964657)
chr3 (18-52)||(55326389-55326423)
chr3 (163-200)||(12899092-12899129)
chr3 (163-200)||(16023240-16023277)
chr3 (75-128)||(19340119-19340172)
chr3 (4-57)||(32746243-32746296)
chr3 (152-232)||(45903861-45903942)
chr3 (62-118)||(429062-429118)
chr3 (18-50)||(3419600-3419632)
chr3 (23-51)||(12112118-12112146)
chr3 (80-128)||(53358757-53358805)
[»] scaffold0008 (1 HSPs)
scaffold0008 (10-232)||(256391-256612)
[»] chr6 (39 HSPs)
chr6 (4-231)||(15990990-15991216)
chr6 (80-231)||(2759671-2759819)
chr6 (82-200)||(9751106-9751225)
chr6 (69-144)||(16625056-16625131)
chr6 (6-56)||(19994844-19994894)
chr6 (62-152)||(2862842-2862933)
chr6 (69-143)||(31477084-31477158)
chr6 (163-231)||(2759484-2759552)
chr6 (80-144)||(27073636-27073700)
chr6 (62-125)||(24588576-24588639)
chr6 (69-143)||(15704291-15704365)
chr6 (69-145)||(6112137-6112213)
chr6 (80-140)||(26981246-26981306)
chr6 (166-241)||(28964130-28964206)
chr6 (2-49)||(2759865-2759912)
chr6 (163-198)||(2882126-2882161)
chr6 (69-143)||(16761022-16761097)
chr6 (6-53)||(17599966-17600013)
chr6 (6-53)||(17914184-17914231)
chr6 (69-128)||(19772407-19772466)
chr6 (80-143)||(27324441-27324504)
chr6 (163-197)||(2862824-2862858)
chr6 (69-127)||(22949872-22949930)
chr6 (69-127)||(22953828-22953886)
chr6 (69-127)||(23872316-23872374)
chr6 (69-127)||(23876272-23876330)
chr6 (6-52)||(12405812-12405855)
chr6 (80-144)||(18387583-18387647)
chr6 (62-152)||(2882145-2882236)
chr6 (81-128)||(14073787-14073834)
chr6 (88-143)||(14322790-14322845)
chr6 (17-52)||(16835608-16835643)
chr6 (18-52)||(11428571-11428605)
chr6 (18-52)||(14509584-14509618)
chr6 (69-143)||(22806991-22807065)
chr6 (20-57)||(13657511-13657548)
chr6 (152-200)||(6112108-6112156)
chr6 (80-128)||(15640961-15641009)
chr6 (184-232)||(16625136-16625184)
[»] scaffold0009 (2 HSPs)
scaffold0009 (69-220)||(71772-71920)
scaffold0009 (6-53)||(147841-147888)
[»] chr2 (41 HSPs)
chr2 (18-144)||(17452965-17453098)
chr2 (72-152)||(22845045-22845126)
chr2 (69-152)||(25375529-25375613)
chr2 (90-226)||(30635457-30635590)
chr2 (163-232)||(22845110-22845179)
chr2 (80-144)||(6856848-6856912)
chr2 (69-143)||(1284154-1284228)
chr2 (87-144)||(26897285-26897342)
chr2 (87-144)||(34070077-34070134)
chr2 (89-152)||(30641481-30641545)
chr2 (70-144)||(377669-377743)
chr2 (62-128)||(10160115-10160181)
chr2 (80-142)||(17327711-17327773)
chr2 (69-127)||(30344312-30344370)
chr2 (163-232)||(7559667-7559736)
chr2 (87-144)||(24292841-24292898)
chr2 (67-128)||(30658815-30658876)
chr2 (11-56)||(40847037-40847082)
chr2 (163-231)||(17452904-17452972)
chr2 (152-200)||(30641460-30641508)
chr2 (14-53)||(19578029-19578068)
chr2 (163-241)||(28855838-28855917)
chr2 (101-144)||(30629531-30629574)
chr2 (69-143)||(23068133-23068207)
chr2 (80-117)||(7559757-7559794)
chr2 (152-231)||(10160036-10160117)
chr2 (87-144)||(24286273-24286330)
chr2 (163-232)||(25375597-25375666)
chr2 (132-199)||(19589052-19589120)
chr2 (88-119)||(3238840-3238871)
chr2 (80-143)||(9785799-9785862)
chr2 (62-144)||(13290942-13291025)
chr2 (18-53)||(30651525-30651560)
chr2 (18-52)||(1934443-1934477)
chr2 (152-241)||(6297200-6297290)
chr2 (18-52)||(9184867-9184901)
chr2 (18-52)||(31327364-31327398)
chr2 (87-144)||(42248885-42248942)
chr2 (101-156)||(30619543-30619599)
chr2 (81-117)||(38426927-38426962)
chr2 (17-57)||(38591822-38591862)
[»] chr1 (47 HSPs)
chr1 (80-152)||(1067132-1067205)
chr1 (64-144)||(14804139-14804219)
chr1 (86-152)||(13893973-13894040)
chr1 (62-144)||(40232767-40232849)
chr1 (80-152)||(17213814-17213887)
chr1 (80-144)||(14819623-14819687)
chr1 (80-144)||(22428575-22428639)
chr1 (2-53)||(12260586-12260637)
chr1 (6-53)||(16036218-16036265)
chr1 (62-144)||(3094722-3094804)
chr1 (69-143)||(39243403-39243477)
chr1 (69-143)||(39246958-39247032)
chr1 (62-144)||(41097337-41097419)
chr1 (69-143)||(41387355-41387429)
chr1 (87-144)||(52100601-52100658)
chr1 (88-152)||(23285210-23285274)
chr1 (10-53)||(20107953-20107996)
chr1 (69-127)||(1924450-1924508)
chr1 (69-127)||(20923464-20923522)
chr1 (152-232)||(3094786-3094867)
chr1 (9-54)||(8138229-8138274)
chr1 (87-144)||(21498309-21498366)
chr1 (152-232)||(19725223-19725303)
chr1 (18-53)||(7882597-7882632)
chr1 (91-126)||(39037047-39037082)
chr1 (60-142)||(23254568-23254650)
chr1 (163-232)||(19727073-19727142)
chr1 (80-144)||(2367694-2367758)
chr1 (163-231)||(16836612-16836680)
chr1 (80-144)||(26199009-26199073)
chr1 (69-152)||(27308258-27308342)
chr1 (152-200)||(40232737-40232785)
chr1 (152-200)||(41097307-41097355)
chr1 (165-220)||(1067191-1067246)
chr1 (181-232)||(26199075-26199126)
chr1 (86-128)||(8267247-8267289)
chr1 (18-52)||(16834086-16834120)
chr1 (69-111)||(16836698-16836740)
chr1 (18-52)||(23192276-23192310)
chr1 (18-52)||(25844366-25844400)
chr1 (18-52)||(38621319-38621353)
chr1 (163-200)||(13894024-13894061)
chr1 (166-226)||(27308210-27308271)
chr1 (80-144)||(2384625-2384689)
chr1 (163-199)||(8267202-8267238)
chr1 (20-52)||(19798450-19798482)
chr1 (20-52)||(40166577-40166609)
[»] chr8 (48 HSPs)
chr8 (22-221)||(42972707-42972905)
chr8 (62-144)||(31449244-31449326)
chr8 (67-144)||(4237720-4237797)
chr8 (67-144)||(4242459-4242536)
chr8 (1-53)||(7002244-7002296)
chr8 (89-152)||(17153198-17153262)
chr8 (80-144)||(19393110-19393174)
chr8 (62-144)||(8330742-8330824)
chr8 (87-144)||(4582675-4582732)
chr8 (67-144)||(43302063-43302140)
chr8 (80-144)||(16066596-16066660)
chr8 (80-144)||(22104326-22104390)
chr8 (89-144)||(17157431-17157486)
chr8 (163-232)||(10933948-10934018)
chr8 (69-127)||(18861966-18862024)
chr8 (69-143)||(21411663-21411737)
chr8 (69-143)||(21806155-21806229)
chr8 (152-232)||(4237657-4237738)
chr8 (152-232)||(4242396-4242477)
chr8 (70-143)||(21384385-21384458)
chr8 (70-143)||(21387805-21387878)
chr8 (4-49)||(24672779-24672824)
chr8 (6-46)||(2966228-2966268)
chr8 (80-144)||(14036106-14036170)
chr8 (80-128)||(37772358-37772406)
chr8 (18-53)||(17953422-17953457)
chr8 (69-127)||(21827335-21827393)
chr8 (86-144)||(25367365-25367423)
chr8 (6-52)||(26779714-26779760)
chr8 (86-144)||(34818085-34818143)
chr8 (152-232)||(31449181-31449262)
chr8 (181-232)||(22104392-22104443)
chr8 (2-53)||(22714444-22714494)
chr8 (6-53)||(23548066-23548113)
chr8 (163-241)||(25367293-25367372)
chr8 (18-52)||(15951002-15951036)
chr8 (18-52)||(33417142-33417176)
chr8 (18-52)||(38181692-38181726)
chr8 (18-52)||(40125345-40125379)
chr8 (152-232)||(43302002-43302081)
chr8 (152-232)||(8330679-8330760)
chr8 (163-200)||(17153246-17153283)
chr8 (2-35)||(28863976-28864009)
chr8 (152-232)||(34818022-34818103)
chr8 (93-152)||(10933904-10933964)
chr8 (86-122)||(15197295-15197331)
chr8 (21-53)||(17794090-17794122)
chr8 (184-232)||(19393057-19393105)
[»] scaffold0182 (2 HSPs)
scaffold0182 (62-144)||(9259-9341)
scaffold0182 (152-200)||(9229-9277)
[»] scaffold0357 (1 HSPs)
scaffold0357 (80-144)||(3726-3790)
[»] scaffold0327 (1 HSPs)
scaffold0327 (80-144)||(19601-19665)
[»] chr5 (47 HSPs)
chr5 (69-152)||(3666553-3666637)
chr5 (62-144)||(36936890-36936972)
chr5 (62-144)||(36941644-36941726)
chr5 (62-144)||(41997297-41997379)
chr5 (62-144)||(42002066-42002148)
chr5 (2-104)||(1429584-1429690)
chr5 (69-152)||(36949425-36949509)
chr5 (2-57)||(16115678-16115733)
chr5 (62-128)||(557329-557395)
chr5 (69-143)||(10754090-10754164)
chr5 (62-144)||(13300869-13300951)
chr5 (62-144)||(23976966-23977048)
chr5 (62-144)||(32460923-32461005)
chr5 (3-56)||(2859941-2859994)
chr5 (80-144)||(21826874-21826938)
chr5 (80-144)||(26869693-26869757)
chr5 (80-144)||(31732188-31732252)
chr5 (62-128)||(562101-562167)
chr5 (152-232)||(36936827-36936908)
chr5 (152-232)||(36941581-36941662)
chr5 (163-232)||(36949493-36949562)
chr5 (80-128)||(15395235-15395283)
chr5 (80-128)||(21323371-21323419)
chr5 (3-50)||(2848104-2848151)
chr5 (3-53)||(15414346-15414394)
chr5 (6-53)||(23757264-23757311)
chr5 (6-53)||(23822720-23822767)
chr5 (152-229)||(32460863-32460941)
chr5 (80-117)||(8770894-8770931)
chr5 (87-144)||(41099188-41099245)
chr5 (152-232)||(41997361-41997442)
chr5 (152-232)||(42002130-42002211)
chr5 (80-144)||(12044509-12044573)
chr5 (152-200)||(31732234-31732282)
chr5 (181-232)||(21826940-21826991)
chr5 (152-199)||(23976937-23976984)
chr5 (181-232)||(26869640-26869691)
chr5 (75-110)||(27425136-27425171)
chr5 (18-53)||(39519006-39519041)
chr5 (163-197)||(3666621-3666655)
chr5 (18-52)||(4872512-4872546)
chr5 (163-229)||(24435503-24435569)
chr5 (168-232)||(557408-557473)
chr5 (168-232)||(562180-562245)
chr5 (163-228)||(1429496-1429561)
chr5 (163-232)||(8770952-8771021)
chr5 (69-142)||(24435564-24435637)
[»] scaffold0132 (2 HSPs)
scaffold0132 (80-144)||(24675-24739)
scaffold0132 (184-232)||(24622-24670)
[»] scaffold0061 (2 HSPs)
scaffold0061 (80-144)||(49363-49427)
scaffold0061 (152-200)||(49333-49381)
[»] scaffold0019 (1 HSPs)
scaffold0019 (80-144)||(30335-30399)
[»] scaffold0017 (2 HSPs)
scaffold0017 (80-144)||(149207-149271)
scaffold0017 (152-200)||(149253-149301)
[»] scaffold0572 (1 HSPs)
scaffold0572 (69-143)||(10356-10430)
[»] scaffold0229 (1 HSPs)
scaffold0229 (69-143)||(10806-10880)
[»] scaffold0205 (1 HSPs)
scaffold0205 (62-144)||(30900-30982)
[»] scaffold0157 (1 HSPs)
scaffold0157 (69-143)||(31965-32039)
[»] scaffold0144 (1 HSPs)
scaffold0144 (69-143)||(7517-7591)
[»] scaffold0141 (1 HSPs)
scaffold0141 (69-143)||(13392-13466)
[»] scaffold0124 (1 HSPs)
scaffold0124 (69-143)||(21366-21440)
[»] scaffold0070 (4 HSPs)
scaffold0070 (62-144)||(59059-59141)
scaffold0070 (86-144)||(63285-63343)
scaffold0070 (163-241)||(59134-59213)
scaffold0070 (163-241)||(63336-63415)
[»] scaffold0034 (1 HSPs)
scaffold0034 (69-143)||(121206-121280)
[»] scaffold0015 (2 HSPs)
scaffold0015 (87-144)||(193646-193703)
scaffold0015 (90-144)||(187961-188014)
[»] scaffold1910 (1 HSPs)
scaffold1910 (80-144)||(517-581)
[»] scaffold0932 (1 HSPs)
scaffold0932 (62-142)||(1020-1100)
[»] scaffold0720 (2 HSPs)
scaffold0720 (89-152)||(5921-5985)
scaffold0720 (163-200)||(5900-5937)
[»] scaffold0478 (3 HSPs)
scaffold0478 (89-152)||(8247-8311)
scaffold0478 (163-200)||(8295-8332)
scaffold0478 (163-197)||(2917-2951)
[»] scaffold0060 (4 HSPs)
scaffold0060 (80-144)||(47352-47416)
scaffold0060 (80-144)||(52296-52360)
scaffold0060 (152-200)||(47322-47370)
scaffold0060 (152-200)||(52266-52314)
[»] scaffold0452 (1 HSPs)
scaffold0452 (69-143)||(12348-12422)
[»] scaffold0431 (1 HSPs)
scaffold0431 (69-143)||(14857-14931)
[»] scaffold0415 (1 HSPs)
scaffold0415 (69-127)||(1128-1186)
[»] scaffold0020 (1 HSPs)
scaffold0020 (152-241)||(547-637)
[»] scaffold0044 (2 HSPs)
scaffold0044 (87-143)||(64818-64874)
scaffold0044 (87-143)||(81216-81272)
[»] scaffold0011 (3 HSPs)
scaffold0011 (69-128)||(127043-127102)
scaffold0011 (18-53)||(145871-145906)
scaffold0011 (163-232)||(127111-127180)
[»] scaffold0628 (1 HSPs)
scaffold0628 (69-143)||(7028-7102)
[»] scaffold0240 (1 HSPs)
scaffold0240 (6-56)||(4571-4620)
[»] scaffold0031 (1 HSPs)
scaffold0031 (69-143)||(35391-35465)
[»] scaffold0018 (1 HSPs)
scaffold0018 (69-143)||(21947-22021)
[»] scaffold0690 (1 HSPs)
scaffold0690 (8-53)||(5829-5874)
[»] scaffold0041 (2 HSPs)
scaffold0041 (153-232)||(35020-35100)
scaffold0041 (80-144)||(35083-35147)
[»] scaffold0004 (1 HSPs)
scaffold0004 (80-144)||(199841-199905)
[»] scaffold0292 (1 HSPs)
scaffold0292 (69-128)||(7807-7866)
[»] scaffold0002 (1 HSPs)
scaffold0002 (18-52)||(4675-4709)
[»] scaffold0575 (1 HSPs)
scaffold0575 (71-128)||(5276-5333)


Alignment Details
Target: chr4 (Bit Score: 243; Significance: 1e-135; HSPs: 53)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 243; E-Value: 1e-135
Query Start/End: Original strand, 1 - 263
Target Start/End: Complemental strand, 26188190 - 26187928
Alignment:
Q  1 acgttaacacaagctggagggagaagagagaaagagttctcgacaactcaatataacccttgtgtctggaatgcactacgtgagttctctatttatagag 100  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||    
T  26188190 acgttaacacaagctggagggagaagagagaaagagttctcgacaactcaatataacccttgtgtctggaatgcactacgtgagttctctatttatatag 26188091  T
Q  101 aaaattcacaactaatatgtgagaaactctaggaacaagtaattacatattacttttggagtaagtaattcacatattagatctagtataaaaatatctc 200  Q
      |||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||    
T  26188090 ttaattcacaactaatatgtgagaaactttaggaacaagtaattacatattacttttggagtaaataattcacatattagatctagtataaaaatatctc 26187991  T
Q  201 gatcgagtgccaagatatatcatattgagtacgaaagatatagagactaagatgacactttca 263  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  26187990 gatcgagtgccaagatatatcatattgagtacgaaagatatagagactaagatgacactttca 26187928  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 70 - 194
Target Start/End: Original strand, 55073787 - 55073912
Alignment:
Q  70 aatgcactacgtgagttctctatttatagagaaaattcacaactaatatgtgagaaactctaggaacaagtaatt-acatattacttttggagtaagtaa 168  Q
    |||| |||||||||| ||||||||||||||||||||||||||||||||| || |||||| ||| |||||| |||| |||||||| ||| ||| |||  ||    
T  55073787 aatgaactacgtgagatctctatttatagagaaaattcacaactaatatatgtgaaactttagaaacaagcaattcacatattagtttgggaataatcaa 55073886  T
Q  169 ttcacatattagatctagtataaaaa 194  Q
    || |||||||||||||||| ||||||    
T  55073887 ttaacatattagatctagtttaaaaa 55073912  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 18 - 241
Target Start/End: Complemental strand, 43477522 - 43477301
Alignment:
Q  18 agggagaagagagaaagagttctcgacaactcaatataaccctt--gtgtctggaatgcactacgtgagttctctatttatagagaaaattcacaactaa 115  Q
    |||| ||||||||||||||| || |||||||||||| ||| |||  |||| || |||||||||  |||||| |||||||||||||||||||||||| |||    
T  43477522 agggggaagagagaaagagtacttgacaactcaatagaactctttggtgtgtgaaatgcacta--tgagttatctatttatagagaaaattcacaattaa 43477425  T
Q  116 tatgtgagaaactctaggaacaagtaattacat-attacttttggagtaagtaattcacatattagatctagtataaaaatatctcgatcgagtgccaag 214  Q
    || |||| ||||| | | |||  |||| ||||| |||||||| | | ||||||||||  | ||||||||||||| ||||||||||| || || | ||||     
T  43477424 taagtgataaactttggaaac--gtaa-tacatcattactttagaattaagtaattctaacattagatctagtacaaaaatatctcaattgaataccaaa 43477328  T
Q  215 atatatcatattgagtacgaaagatat 241  Q
    |||||  ||||||||||| ||| ||||    
T  43477327 atatactatattgagtacaaaatatat 43477301  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 69 - 144
Target Start/End: Original strand, 15225805 - 15225880
Alignment:
Q  69 gaatgcactacgtgagttctctatttatagagaaaattcacaactaatatgtgagaaactctaggaacaagtaatt 144  Q
    |||||||||  ||||| |||||||||||||||||| ||||||||||||| |||||||||| | |||||||||||||    
T  15225805 gaatgcactctgtgagctctctatttatagagaaatttcacaactaataggtgagaaactttgggaacaagtaatt 15225880  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 2 - 51
Target Start/End: Complemental strand, 15805142 - 15805093
Alignment:
Q  2 cgttaacacaagctggagggagaagagagaaagagttctcgacaactcaa 51  Q
    ||||||||||||||||| ||||||||||||||||||||||||||||||||    
T  15805142 cgttaacacaagctggaaggagaagagagaaagagttctcgacaactcaa 15805093  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 80 - 144
Target Start/End: Original strand, 26034839 - 26034903
Alignment:
Q  80 gtgagttctctatttatagagaaaattcacaactaatatgtgagaaactctaggaacaagtaatt 144  Q
    ||||| |||||||||||||||||| ||||||||||||| |||||||||| | |||||||||||||    
T  26034839 gtgagctctctatttatagagaaatttcacaactaataggtgagaaactttgggaacaagtaatt 26034903  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 6 - 53
Target Start/End: Original strand, 6943378 - 6943425
Alignment:
Q  6 aacacaagctggagggagaagagagaaagagttctcgacaactcaata 53  Q
    ||||||||||||||||||||||| ||||||||||||||||||||||||    
T  6943378 aacacaagctggagggagaagagcgaaagagttctcgacaactcaata 6943425  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 69 - 144
Target Start/End: Complemental strand, 14899070 - 14898995
Alignment:
Q  69 gaatgcactacgtgagttctctatttatagagaaaattcacaactaatatgtgagaaactctaggaacaagtaatt 144  Q
    |||||||||  ||||| |||||||||||||||||| |||||||||||||  ||||||||| | |||||||||||||    
T  14899070 gaatgcactgtgtgagctctctatttatagagaaacttcacaactaataaatgagaaactttgggaacaagtaatt 14898995  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 73 - 144
Target Start/End: Original strand, 34561068 - 34561139
Alignment:
Q  73 gcactacgtgagttctctatttatagagaaaattcacaactaatatgtgagaaactctaggaacaagtaatt 144  Q
    |||||| ||||| |||||||||||||||||| ||||||||||||| |||||||||| | ||| |||||||||    
T  34561068 gcactatgtgagctctctatttatagagaaagttcacaactaataagtgagaaactttgggagcaagtaatt 34561139  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 69 - 143
Target Start/End: Original strand, 12488438 - 12488512
Alignment:
Q  69 gaatgcactacgtgagttctctatttatagagaaaattcacaactaatatgtgagaaactctaggaacaagtaat 143  Q
    |||||||||  |||||||||||||||||||||| |||| |||||||||| |||||||||| | | ||||||||||    
T  12488438 gaatgcactgtgtgagttctctatttatagagataatttacaactaataagtgagaaactttggaaacaagtaat 12488512  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 62 - 128
Target Start/End: Original strand, 47575295 - 47575361
Alignment:
Q  62 gtgtctggaatgcactacgtgagttctctatttatagagaaaattcacaactaatatgtgagaaact 128  Q
    |||| |||||||||||  ||||| ||||| |||||||||||||||||||||||||| ||||||||||    
T  47575295 gtgtgtggaatgcactgtgtgagctctctttttatagagaaaattcacaactaataagtgagaaact 47575361  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 67 - 144
Target Start/End: Complemental strand, 13521441 - 13521364
Alignment:
Q  67 tggaatgcactacgtgagttctctatttatagagaaaattcacaactaatatgtgagaaactctaggaacaagtaatt 144  Q
    |||||||||||  ||||| |||||||||||||| ||| ||||||||||||| |||||||||| | ||| |||||||||    
T  13521441 tggaatgcactgtgtgagctctctatttatagataaagttcacaactaataagtgagaaactttgggagcaagtaatt 13521364  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 80 - 144
Target Start/End: Complemental strand, 3997505 - 3997441
Alignment:
Q  80 gtgagttctctatttatagagaaaattcacaactaatatgtgagaaactctaggaacaagtaatt 144  Q
    ||||| |||||||||||||||||| ||||||||||||| |||||||||| | ||| |||||||||    
T  3997505 gtgagctctctatttatagagaaagttcacaactaataagtgagaaactttgggagcaagtaatt 3997441  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 80 - 144
Target Start/End: Complemental strand, 7902554 - 7902490
Alignment:
Q  80 gtgagttctctatttatagagaaaattcacaactaatatgtgagaaactctaggaacaagtaatt 144  Q
    ||||| |||||||||||||||||| ||||||||||||| |||||||||| | ||| |||||||||    
T  7902554 gtgagctctctatttatagagaaagttcacaactaataagtgagaaactttgggagcaagtaatt 7902490  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 80 - 144
Target Start/End: Complemental strand, 9185127 - 9185063
Alignment:
Q  80 gtgagttctctatttatagagaaaattcacaactaatatgtgagaaactctaggaacaagtaatt 144  Q
    ||||| ||||||||| |||||||| ||||||||||||| |||||||||| | |||||||||||||    
T  9185127 gtgagctctctatttgtagagaaatttcacaactaataagtgagaaactttgggaacaagtaatt 9185063  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 80 - 144
Target Start/End: Complemental strand, 9190992 - 9190928
Alignment:
Q  80 gtgagttctctatttatagagaaaattcacaactaatatgtgagaaactctaggaacaagtaatt 144  Q
    ||||| ||||||||| |||||||| ||||||||||||| |||||||||| | |||||||||||||    
T  9190992 gtgagctctctatttgtagagaaatttcacaactaataagtgagaaactttgggaacaagtaatt 9190928  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 69 - 144
Target Start/End: Complemental strand, 14868522 - 14868447
Alignment:
Q  69 gaatgcactacgtgagttctctatttatagagaaaattcacaactaatatgtgagaaactctaggaacaagtaatt 144  Q
    |||||||||  ||||| |||||||||||||||||| |||||||||||||  ||||||||| | |||| ||||||||    
T  14868522 gaatgcactgtgtgagctctctatttatagagaaacttcacaactaataaatgagaaactttgggaagaagtaatt 14868447  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 69 - 144
Target Start/End: Original strand, 14877412 - 14877487
Alignment:
Q  69 gaatgcactacgtgagttctctatttatagagaaaattcacaactaatatgtgagaaactctaggaacaagtaatt 144  Q
    |||||||||  ||||| |||||||||||||||||| |||||||||||||  ||||||||| | |||| ||||||||    
T  14877412 gaatgcactgtgtgagctctctatttatagagaaacttcacaactaataaatgagaaactttgggaagaagtaatt 14877487  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 69 - 127
Target Start/End: Complemental strand, 14953509 - 14953451
Alignment:
Q  69 gaatgcactacgtgagttctctatttatagagaaaattcacaactaatatgtgagaaac 127  Q
    |||||||||  |||||||||||||||||||||| |||| |||||||||| |||||||||    
T  14953509 gaatgcactgtgtgagttctctatttatagagataatttacaactaataagtgagaaac 14953451  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 62 - 128
Target Start/End: Complemental strand, 31297956 - 31297890
Alignment:
Q  62 gtgtctggaatgcactacgtgagttctctatttatagagaaaattcacaactaatatgtgagaaact 128  Q
    |||| |||||||||||  ||||| |||||||||||||||| | ||||||||||||| ||||||||||    
T  31297956 gtgtatggaatgcactgtgtgagctctctatttatagagagagttcacaactaataagtgagaaact 31297890  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 75 - 125
Target Start/End: Original strand, 32545529 - 32545579
Alignment:
Q  75 actacgtgagttctctatttatagagaaaattcacaactaatatgtgagaa 125  Q
    |||| ||||| |||||||||||||||||||||| |||||||||||||||||    
T  32545529 actatgtgagctctctatttatagagaaaattcgcaactaatatgtgagaa 32545579  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 152 - 232
Target Start/End: Complemental strand, 13521382 - 13521301
Alignment:
Q  152 acttttggagtaagtaattcacatattagatctagtataaaaatatctc-gatcgagtgccaagatatatcatattgagtac 232  Q
    ||||| |||| ||||||||| |||||||||||||||| |||||||||||  || ||||  ||| ||||||||||||||||||    
T  13521382 actttgggagcaagtaattctcatattagatctagtacaaaaatatctcaaattgagtctcaaaatatatcatattgagtac 13521301  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 70 - 143
Target Start/End: Complemental strand, 15011269 - 15011196
Alignment:
Q  70 aatgcactacgtgagttctctatttatagagaaaattcacaactaatatgtgagaaactctaggaacaagtaat 143  Q
    ||||||||  |||||||||||||||||||||| | || |||||||||| |||||||||| | | ||||||||||    
T  15011269 aatgcactgtgtgagttctctatttatagagatagtttacaactaataagtgagaaactttggaaacaagtaat 15011196  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 152 - 232
Target Start/End: Original strand, 41817492 - 41817573
Alignment:
Q  152 acttttggagtaagtaattcacatattagatctagtataaaaatatctc-gatcgagtgccaagatatatcatattgagtac 232  Q
    ||||| |||| ||||||||| |||||||||||||||| ||||| |||||  |||||||  ||| ||||||||||||||||||    
T  41817492 actttgggagcaagtaattctcatattagatctagtacaaaaacatctcaaatcgagtctcaaaatatatcatattgagtac 41817573  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 152 - 200
Target Start/End: Complemental strand, 7902508 - 7902460
Alignment:
Q  152 acttttggagtaagtaattcacatattagatctagtataaaaatatctc 200  Q
    ||||| |||| ||||||||| ||||||||||||||||||||||||||||    
T  7902508 actttgggagcaagtaattctcatattagatctagtataaaaatatctc 7902460  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 6 - 53
Target Start/End: Complemental strand, 13065301 - 13065254
Alignment:
Q  6 aacacaagctggagggagaagagagaaagagttctcgacaactcaata 53  Q
    |||||||||||||||||||||||| ||||| || ||||||||||||||    
T  13065301 aacacaagctggagggagaagagataaagatttttcgacaactcaata 13065254  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 6 - 53
Target Start/End: Complemental strand, 39216583 - 39216536
Alignment:
Q  6 aacacaagctggagggagaagagagaaagagttctcgacaactcaata 53  Q
    ||||||||||||||||||||||||||||||||||| || | |||||||    
T  39216583 aacacaagctggagggagaagagagaaagagttctagaaacctcaata 39216536  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 67 - 126
Target Start/End: Complemental strand, 52742680 - 52742621
Alignment:
Q  67 tggaatgcactacgtgagttctctatttatagagaaaattcacaactaatatgtgagaaa 126  Q
    ||||||| |||| ||||| ||||||||||||||||||||| |||||||||| | ||||||    
T  52742680 tggaatgaactatgtgagctctctatttatagagaaaattgacaactaatacgcgagaaa 52742621  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 69 - 143
Target Start/End: Original strand, 10713580 - 10713654
Alignment:
Q  69 gaatgcactacgtgagttctctatttatagagaaaattcacaactaatatgtgagaaactctaggaacaagtaat 143  Q
    |||||||||  ||||||||||||||||||||||  ||| |||||||||  |||||||||| | | ||||||||||    
T  10713580 gaatgcactgtgtgagttctctatttatagagatgatttacaactaatgagtgagaaactttggaaacaagtaat 10713654  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 69 - 143
Target Start/End: Original strand, 10927350 - 10927424
Alignment:
Q  69 gaatgcactacgtgagttctctatttatagagaaaattcacaactaatatgtgagaaactctaggaacaagtaat 143  Q
    |||||||||  ||||||||||||||||||||||  ||| |||||||||  |||||||||| | | ||||||||||    
T  10927350 gaatgcactgtgtgagttctctatttatagagatgatttacaactaatgagtgagaaactttggaaacaagtaat 10927424  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 69 - 127
Target Start/End: Original strand, 25690634 - 25690692
Alignment:
Q  69 gaatgcactacgtgagttctctatttatagagaaaattcacaactaatatgtgagaaac 127  Q
    |||||||||  |||||||||||||||||||||| |||| | |||||||| |||||||||    
T  25690634 gaatgcactgtgtgagttctctatttatagagataatttataactaataagtgagaaac 25690692  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 18 - 52
Target Start/End: Complemental strand, 33462848 - 33462814
Alignment:
Q  18 agggagaagagagaaagagttctcgacaactcaat 52  Q
    |||||||||||||||||||||||||||||||||||    
T  33462848 agggagaagagagaaagagttctcgacaactcaat 33462814  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 152 - 232
Target Start/End: Original strand, 34561121 - 34561202
Alignment:
Q  152 acttttggagtaagtaattcacatattagatctagtataaaaatatctc-gatcgagtgccaagatatatcatattgagtac 232  Q
    ||||| |||| ||||||||| ||||||| |||||||| |||||||||||  || ||||  ||| ||||||||||||||||||    
T  34561121 actttgggagcaagtaattctcatattaaatctagtacaaaaatatctcaaattgagtctcaaaatatatcatattgagtac 34561202  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 184 - 236
Target Start/End: Complemental strand, 9185058 - 9185006
Alignment:
Q  184 tagtataaaaatatctcgatcgagtgccaagatatatcatattgagtacgaaa 236  Q
    ||||| ||||||||||| || |||| |||| ||||||||||||||||||||||    
T  9185058 tagtacaaaaatatctcaattgagtaccaaaatatatcatattgagtacgaaa 9185006  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 82 - 122
Target Start/End: Original strand, 15539572 - 15539612
Alignment:
Q  82 gagttctctatttatagagaaaattcacaactaatatgtga 122  Q
    |||||||||||||| |||||||||||||||| |||||||||    
T  15539572 gagttctctatttacagagaaaattcacaaccaatatgtga 15539612  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 162 - 237
Target Start/End: Complemental strand, 52742611 - 52742535
Alignment:
Q  162 taagtaattcacatattagatctagtataaaaatatctc-gatcgagtgccaagatatatcatattgagtacgaaag 237  Q
    |||||||||||| |||||||||||||| |||||||| ||  || |||| |||| |||| ||||||||||||| ||||    
T  52742611 taagtaattcacgtattagatctagtagaaaaatatatcaaattgagtaccaaaatatgtcatattgagtacaaaag 52742535  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 86 - 152
Target Start/End: Complemental strand, 1150796 - 1150729
Alignment:
Q  86 tctctatttatagagaaaattcacaactaatatgtgagaaactctaggaacaagtaatt-acatatta 152  Q
    |||||||||||||||||||||||||| || | ||||||| ||| | ||||||||| ||| ||||||||    
T  1150796 tctctatttatagagaaaattcacaagtactttgtgagacactttgggaacaagtgattcacatatta 1150729  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 14 - 53
Target Start/End: Original strand, 12875024 - 12875063
Alignment:
Q  14 ctggagggagaagagagaaagagttctcgacaactcaata 53  Q
    ||||| ||||||||||||||| ||||||||||||||||||    
T  12875024 ctggatggagaagagagaaagggttctcgacaactcaata 12875063  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 2 - 53
Target Start/End: Complemental strand, 30054564 - 30054513
Alignment:
Q  2 cgttaacacaagctggagggagaagagagaaagagttctcgacaactcaata 53  Q
    ||||||||||| ||| ||||||||||||||||| |||||| |||||| ||||    
T  30054564 cgttaacacaaactgaagggagaagagagaaagtgttctcaacaacttaata 30054513  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 18 - 53
Target Start/End: Complemental strand, 42758340 - 42758305
Alignment:
Q  18 agggagaagagagaaagagttctcgacaactcaata 53  Q
    |||||| |||||||||||||||||||||||||||||    
T  42758340 agggagcagagagaaagagttctcgacaactcaata 42758305  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 18 - 52
Target Start/End: Complemental strand, 8029826 - 8029792
Alignment:
Q  18 agggagaagagagaaagagttctcgacaactcaat 52  Q
    |||||||||||||||||||||| ||||||||||||    
T  8029826 agggagaagagagaaagagttcccgacaactcaat 8029792  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 18 - 52
Target Start/End: Original strand, 31269636 - 31269670
Alignment:
Q  18 agggagaagagagaaagagttctcgacaactcaat 52  Q
    |||||||||||||||||||||| ||||||||||||    
T  31269636 agggagaagagagaaagagttcccgacaactcaat 31269670  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 163 - 232
Target Start/End: Complemental strand, 31297880 - 31297810
Alignment:
Q  163 aagtaattcacatattagatctagtataaaaatatctc-gatcgagtgccaagatatatcatattgagtac 232  Q
    ||||||||| |||||||||||||||| |||||||||||  || ||||  ||| |||||||| |||||||||    
T  31297880 aagtaattctcatattagatctagtacaaaaatatctcaaattgagtctcaaaatatatcacattgagtac 31297810  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 18 - 52
Target Start/End: Complemental strand, 33468487 - 33468453
Alignment:
Q  18 agggagaagagagaaagagttctcgacaactcaat 52  Q
    |||||||||||||||||||||| ||||||||||||    
T  33468487 agggagaagagagaaagagttcccgacaactcaat 33468453  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 18 - 52
Target Start/End: Complemental strand, 37259348 - 37259314
Alignment:
Q  18 agggagaagagagaaagagttctcgacaactcaat 52  Q
    |||||||||||||||||||||| ||||||||||||    
T  37259348 agggagaagagagaaagagttcccgacaactcaat 37259314  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 80 - 126
Target Start/End: Original strand, 39320213 - 39320259
Alignment:
Q  80 gtgagttctctatttatagagaaaattcacaactaatatgtgagaaa 126  Q
    ||||| ||||||||||||| |||| ||||||||||||| ||||||||    
T  39320213 gtgagctctctatttatagtgaaagttcacaactaataagtgagaaa 39320259  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 157 - 232
Target Start/End: Original strand, 47575363 - 47575440
Alignment:
Q  157 tggagtaagtaattcacatattagatctagta-taaaaatatctc-gatcgagtgccaagatatatcatattgagtac 232  Q
    ||||| |||||||||| |||||||||||||||  |||||||||||  || ||||  ||| ||||||||||||||||||    
T  47575363 tggagcaagtaattcatatattagatctagtacaaaaaatatctcaaattgagtctcaaaatatatcatattgagtac 47575440  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 9 - 53
Target Start/End: Original strand, 2820407 - 2820451
Alignment:
Q  9 acaagctggagggagaagagagaaagagttctcgacaactcaata 53  Q
    ||||| |||| |||||||||| |||||||||||||| ||||||||    
T  2820407 acaagttggatggagaagagaaaaagagttctcgacgactcaata 2820451  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 101 - 152
Target Start/End: Original strand, 3309918 - 3309970
Alignment:
Q  101 aaaattcacaactaatatgtgagaaactctaggaacaagtaatt-acatatta 152  Q
    |||||||||||||||||||||||| ||  ||||||| ||||||| ||||||||    
T  3309918 aaaattcacaactaatatgtgagagacgttaggaactagtaattcacatatta 3309970  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 80 - 144
Target Start/End: Complemental strand, 8660846 - 8660782
Alignment:
Q  80 gtgagttctctatttatagagaaaattcacaactaatatgtgagaaactctaggaacaagtaatt 144  Q
    ||||| |||||||||| ||||||||||||| ||||||| ||||  |||| | ||||||| |||||    
T  8660846 gtgagctctctatttacagagaaaattcactactaataagtgaagaactttgggaacaaataatt 8660782  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 184 - 236
Target Start/End: Complemental strand, 9190923 - 9190871
Alignment:
Q  184 tagtataaaaatatctcgatcgagtgccaagatatatcatattgagtacgaaa 236  Q
    ||||| ||||||||||| || |||| |||| || |||||||||||||||||||    
T  9190923 tagtacaaaaatatctcaattgagtaccaaaatgtatcatattgagtacgaaa 9190871  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #52
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 184 - 232
Target Start/End: Original strand, 15225885 - 15225933
Alignment:
Q  184 tagtataaaaatatctcgatcgagtgccaagatatatcatattgagtac 232  Q
    ||||| ||||||||||| || |||| |||| ||||||||||||||||||    
T  15225885 tagtacaaaaatatctcaattgagtaccaaaatatatcatattgagtac 15225933  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #53
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 96 - 144
Target Start/End: Original strand, 41817462 - 41817510
Alignment:
Q  96 tagagaaaattcacaactaatatgtgagaaactctaggaacaagtaatt 144  Q
    |||||||| ||||||||||||| |||||||||| | ||| |||||||||    
T  41817462 tagagaaagttcacaactaataagtgagaaactttgggagcaagtaatt 41817510  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 105; Significance: 2e-52; HSPs: 65)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 105; E-Value: 2e-52
Query Start/End: Original strand, 4 - 231
Target Start/End: Complemental strand, 10532354 - 10532128
Alignment:
Q  4 ttaacacaagctggagggagaagagagaaagagttctcgacaactcaatataaccctt--gtgtctggaatgcactacgtgagttctctatttatagaga 101  Q
    ||||||||||| |||||||||||||||||||||||||| | ||||||||  ||| |||  |||| ||||||||||||||||| ||||||| |||||||||    
T  10532354 ttaacacaagccggagggagaagagagaaagagttctcaaaaactcaattgaactctttggtgtgtggaatgcactacgtgaattctctacttatagaga 10532255  T
Q  102 aaattcacaactaatatgtgagaaactctaggaacaagtaattacatattacttttggagtaagtaattcacatattagatctagtataaaaatatctcg 201  Q
    |||||||||||||||| |||||||||| | ||||||  ||||   | |||||||| ||| ||||||||||||||||||||||||||| |||||||||||     
T  10532254 aaattcacaactaataagtgagaaactttgggaacacttaat---acattactttgggattaagtaattcacatattagatctagtacaaaaatatctca 10532158  T
Q  202 atcgagtgccaagatatatcatattgagta 231  Q
    ||  ||| |||| |||||| || |||||||    
T  10532157 attaagtaccaaaatatattatgttgagta 10532128  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 84; E-Value: 5e-40
Query Start/End: Original strand, 2 - 231
Target Start/End: Complemental strand, 13343955 - 13343724
Alignment:
Q  2 cgttaacacaagctggagggagaagaga---gaaagagttctcgacaactcaatataaccctt--gtgtctggaatgcactacgtgagttctctatttat 96  Q
    |||||||||| || ||||||||||||||   | |||| |||||||| |||||||  ||| |||  |||| ||||||||| ||| ||||||| ||||||||    
T  13343955 cgttaacacaggccggagggagaagagatcagtaagaattctcgaccactcaattgaactctttggtgtgtggaatgcattacctgagttcactatttat 13343856  T
Q  97 agagaaaattcacaactaatatgtgagaaactctaggaacaagtaattacatattacttttggagtaagtaattcacatattagatctagtataaaaata 196  Q
    ||||||||||||||||||||| | |||||||| | ||||||| ||||   | |||||||| ||| ||||||||||||||||||||||||||| |||||||    
T  13343855 agagaaaattcacaactaataagagagaaactttgggaacaattaat---acattactttgggaataagtaattcacatattagatctagtacaaaaata 13343759  T
Q  197 tctcgatcgagtgccaagatatatcatattgagta 231  Q
    |||| ||  ||| |||| |||||| || |||||||    
T  13343758 tctcaattaagtaccaaaatatattatgttgagta 13343724  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 2 - 152
Target Start/End: Original strand, 9008728 - 9008881
Alignment:
Q  2 cgttaacacaagctggagggagaagagagaaagagttctcgacaactcaatataaccctt--gtgtctggaatgcactacgtgagttctctatttataga 99  Q
    |||||||||| |||||||||||||||  ||||||||||||||||||| |||| ||| |||  |||| |||||||| ||| | ||| ||||||||||||||    
T  9008728 cgttaacacaggctggagggagaagaaggaaagagttctcgacaactaaatagaactctttggtgtgtggaatgcgctatgagagctctctatttataga 9008827  T
Q  100 gaaaattcacaactaatatgtgagaaactctaggaacaagtaatt-acatatta 152  Q
    |||||||||||||||||| |||||||||| | ||||||| ||||| ||||||||    
T  9008828 gaaaattcacaactaataagtgagaaactttgggaacaaataattcacatatta 9008881  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 74; E-Value: 5e-34
Query Start/End: Original strand, 2 - 128
Target Start/End: Complemental strand, 10499627 - 10499499
Alignment:
Q  2 cgttaacacaagctggagggagaagagagaaagagttctcgacaactcaatataaccctt--gtgtctggaatgcactacgtgagttctctatttataga 99  Q
    ||||||||||||||||| |||||||||| |||||||| || ||||||||||  ||| |||  |||| |||||||||||||  ||||||||||||||||||    
T  10499627 cgttaacacaagctggaaggagaagagataaagagttatcaacaactcaattgaactctttggtgtgtggaatgcactaccagagttctctatttataga 10499528  T
Q  100 gaaaattcacaactaatatgtgagaaact 128  Q
    |||||||||||||||||| ||||||||||    
T  10499527 gaaaattcacaactaataagtgagaaact 10499499  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 74; E-Value: 5e-34
Query Start/End: Original strand, 2 - 128
Target Start/End: Complemental strand, 10504656 - 10504528
Alignment:
Q  2 cgttaacacaagctggagggagaagagagaaagagttctcgacaactcaatataaccctt--gtgtctggaatgcactacgtgagttctctatttataga 99  Q
    ||||||||||||||||| |||||||||| |||||||| || ||||||||||  ||| |||  |||| |||||||||||||  ||||||||||||||||||    
T  10504656 cgttaacacaagctggaaggagaagagataaagagttatcaacaactcaattgaactctttggtgtgtggaatgcactaccagagttctctatttataga 10504557  T
Q  100 gaaaattcacaactaatatgtgagaaact 128  Q
    |||||||||||||||||| ||||||||||    
T  10504556 gaaaattcacaactaataagtgagaaact 10504528  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 6 - 53
Target Start/End: Complemental strand, 26286641 - 26286594
Alignment:
Q  6 aacacaagctggagggagaagagagaaagagttctcgacaactcaata 53  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||    
T  26286641 aacacaagctggagggagaagagagaaagagttctcgacaactcaata 26286594  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 80 - 144
Target Start/End: Complemental strand, 8954710 - 8954646
Alignment:
Q  80 gtgagttctctatttatagagaaaattcacaactaatatgtgagaaactctaggaacaagtaatt 144  Q
    ||||| |||||||||||||||||| ||||||||||||| |||||||||| | |||||||||||||    
T  8954710 gtgagctctctatttatagagaaacttcacaactaataagtgagaaactttgggaacaagtaatt 8954646  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 6 - 53
Target Start/End: Original strand, 3285098 - 3285145
Alignment:
Q  6 aacacaagctggagggagaagagagaaagagttctcgacaactcaata 53  Q
    |||||||||||||||||||||||||||||||||||| |||||||||||    
T  3285098 aacacaagctggagggagaagagagaaagagttctccacaactcaata 3285145  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 6 - 53
Target Start/End: Complemental strand, 10387854 - 10387807
Alignment:
Q  6 aacacaagctggagggagaagagagaaagagttctcgacaactcaata 53  Q
    ||||||||||||||||||||||||||||||||| ||||||||||||||    
T  10387854 aacacaagctggagggagaagagagaaagagttatcgacaactcaata 10387807  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 6 - 53
Target Start/End: Complemental strand, 10392592 - 10392545
Alignment:
Q  6 aacacaagctggagggagaagagagaaagagttctcgacaactcaata 53  Q
    ||||||||||||||||||||||||||||||||||| ||||||||||||    
T  10392592 aacacaagctggagggagaagagagaaagagttctagacaactcaata 10392545  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 73 - 144
Target Start/End: Original strand, 27256881 - 27256952
Alignment:
Q  73 gcactacgtgagttctctatttatagagaaaattcacaactaatatgtgagaaactctaggaacaagtaatt 144  Q
    |||||| ||||| |||||||||||||||||| ||||||||||||| |||||||||| | ||| |||||||||    
T  27256881 gcactatgtgagctctctatttatagagaaagttcacaactaataagtgagaaactttgggagcaagtaatt 27256952  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 86 - 144
Target Start/End: Complemental strand, 846045 - 845987
Alignment:
Q  86 tctctatttatagagaaaattcacaactaatatgtgagaaactctaggaacaagtaatt 144  Q
    |||||||||||||||||| ||||||||||||| |||||||||| | |||||||||||||    
T  846045 tctctatttatagagaaatttcacaactaataggtgagaaactttgggaacaagtaatt 845987  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 86 - 144
Target Start/End: Complemental strand, 853422 - 853364
Alignment:
Q  86 tctctatttatagagaaaattcacaactaatatgtgagaaactctaggaacaagtaatt 144  Q
    |||||||||||||||||| ||||||||||||| |||||||||| | |||||||||||||    
T  853422 tctctatttatagagaaatttcacaactaataggtgagaaactttgggaacaagtaatt 853364  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 86 - 144
Target Start/End: Complemental strand, 1211426 - 1211368
Alignment:
Q  86 tctctatttatagagaaaattcacaactaatatgtgagaaactctaggaacaagtaatt 144  Q
    |||||||||||||||||| ||||||||||||| |||||||||| | |||||||||||||    
T  1211426 tctctatttatagagaaatttcacaactaataggtgagaaactttgggaacaagtaatt 1211368  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 62 - 144
Target Start/End: Original strand, 8076683 - 8076765
Alignment:
Q  62 gtgtctggaatgcactacgtgagttctctatttatagagaaaattcacaactaatatgtgagaaactctaggaacaagtaatt 144  Q
    |||| |||||||||||  ||||| |||||||||||||||||| |||||| |||||| |||||||||| | ||| |||||||||    
T  8076683 gtgtgtggaatgcactgtgtgagctctctatttatagagaaagttcacatctaataagtgagaaactttgggagcaagtaatt 8076765  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 87 - 152
Target Start/End: Original strand, 15566033 - 15566099
Alignment:
Q  87 ctctatttatagagaaaattcacaactaatatgtgagaaactctaggaacaagtaatt-acatatta 152  Q
    ||||||||||| |||||| ||||||||||||||||||||||| | ||||||||||||| ||||||||    
T  15566033 ctctatttatatagaaaactcacaactaatatgtgagaaacttttggaacaagtaattcacatatta 15566099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 69 - 143
Target Start/End: Original strand, 18426567 - 18426641
Alignment:
Q  69 gaatgcactacgtgagttctctatttatagagaaaattcacaactaatatgtgagaaactctaggaacaagtaat 143  Q
    |||||||||  |||||||||||||||||||||| |||| |||||||||| |||||||||| | | ||||||||||    
T  18426567 gaatgcactgtgtgagttctctatttatagagataatttacaactaataagtgagaaactttggaaacaagtaat 18426641  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 67 - 144
Target Start/End: Complemental strand, 9650416 - 9650339
Alignment:
Q  67 tggaatgcactacgtgagttctctatttatagagaaaattcacaactaatatgtgagaaactctaggaacaagtaatt 144  Q
    |||||||||||  ||||| |||||||||||||| ||| ||||||||||||| |||||||||| | ||| |||||||||    
T  9650416 tggaatgcactgtgtgagctctctatttatagataaagttcacaactaataagtgagaaactttgggagcaagtaatt 9650339  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 80 - 144
Target Start/End: Complemental strand, 838875 - 838811
Alignment:
Q  80 gtgagttctctatttatagagaaaattcacaactaatatgtgagaaactctaggaacaagtaatt 144  Q
    ||||| |||||||||||||||||| ||| ||||||||| |||||||||| | |||||||||||||    
T  838875 gtgagctctctatttatagagaaatttcgcaactaataggtgagaaactttgggaacaagtaatt 838811  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 80 - 144
Target Start/End: Complemental strand, 1204055 - 1203991
Alignment:
Q  80 gtgagttctctatttatagagaaaattcacaactaatatgtgagaaactctaggaacaagtaatt 144  Q
    ||||| |||||||||||||||||| ||| ||||||||| |||||||||| | |||||||||||||    
T  1204055 gtgagctctctatttatagagaaatttcgcaactaataggtgagaaactttgggaacaagtaatt 1203991  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 89 - 152
Target Start/End: Original strand, 11297413 - 11297477
Alignment:
Q  89 ctatttatagagaaaattcacaactaatatgtgagaaactctaggaacaagtaatt-acatatta 152  Q
    |||||||||||||||| ||||||||||||||||||||||| |  |||||||||||| ||||||||    
T  11297413 ctatttatagagaaaaatcacaactaatatgtgagaaactttgtgaacaagtaattcacatatta 11297477  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 80 - 144
Target Start/End: Original strand, 19096906 - 19096970
Alignment:
Q  80 gtgagttctctatttatagagaaaattcacaactaatatgtgagaaactctaggaacaagtaatt 144  Q
    ||||| |||||||||||||||||| ||||||||||||| |||||||||| |  ||||||||||||    
T  19096906 gtgagctctctatttatagagaaatttcacaactaataggtgagaaactttgcgaacaagtaatt 19096970  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 67 - 126
Target Start/End: Original strand, 2629294 - 2629353
Alignment:
Q  67 tggaatgcactacgtgagttctctatttatagagaaaattcacaactaatatgtgagaaa 126  Q
    ||||||| |||| ||||| ||| ||||||||||||||||| |||||||||||||||||||    
T  2629294 tggaatgaactatgtgagctctatatttatagagaaaatttacaactaatatgtgagaaa 2629353  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 134 - 200
Target Start/End: Original strand, 7838761 - 7838828
Alignment:
Q  134 aacaagtaatt-acatattacttttggagtaagtaattcacatattagatctagtataaaaatatctc 200  Q
    ||||||||||| |||||||||||| |||  |||||||||| ||||||||||||||| |||||||||||    
T  7838761 aacaagtaattcacatattactttgggaacaagtaattcaaatattagatctagtacaaaaatatctc 7838828  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 80 - 143
Target Start/End: Complemental strand, 45169374 - 45169311
Alignment:
Q  80 gtgagttctctatttatagagaaaattcacaactaatatgtgagaaactctaggaacaagtaat 143  Q
    |||||||||||||||||||||| |||| |||||||||| |||||||||| | | ||||||||||    
T  45169374 gtgagttctctatttatagagataatttacaactaataagtgagaaactttggaaacaagtaat 45169311  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 141 - 200
Target Start/End: Complemental strand, 47552687 - 47552628
Alignment:
Q  141 aattacatattacttttggagtaagtaattcacatattagatctagtataaaaatatctc 200  Q
    ||||| || ||||||| ||||||||||||||||||||||||| ||||| |||||||||||    
T  47552687 aattatatgttactttgggagtaagtaattcacatattagatttagtacaaaaatatctc 47552628  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 90 - 144
Target Start/End: Original strand, 1043880 - 1043934
Alignment:
Q  90 tatttatagagaaaattcacaactaatatgtgagaaactctaggaacaagtaatt 144  Q
    |||||||||||||||||||||| |||||||||||||||| | | |||||||||||    
T  1043880 tatttatagagaaaattcacaattaatatgtgagaaactttggaaacaagtaatt 1043934  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 166 - 232
Target Start/End: Complemental strand, 11017465 - 11017399
Alignment:
Q  166 taattcacatattagatctagtataaaaatatctcgatcgagtgccaagatatatcatattgagtac 232  Q
    |||||||||||||||||||||| |||||||||||| || |||| | || |||||| |||||||||||    
T  11017465 taattcacatattagatctagtgtaaaaatatctcaattgagtactaaaatatattatattgagtac 11017399  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 69 - 143
Target Start/End: Original strand, 14259646 - 14259720
Alignment:
Q  69 gaatgcactacgtgagttctctatttatagagaaaattcacaactaatatgtgagaaactctaggaacaagtaat 143  Q
    |||||||||  |||||||||||||||||||||| | || |||||||||| |||||||||| | | ||||||||||    
T  14259646 gaatgcactgtgtgagttctctatttatagagatagtttacaactaataagtgagaaactttggaaacaagtaat 14259720  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 69 - 143
Target Start/End: Original strand, 20488588 - 20488662
Alignment:
Q  69 gaatgcactacgtgagttctctatttatagagaaaattcacaactaatatgtgagaaactctaggaacaagtaat 143  Q
    |||||||||  |||||||||||||||||||||| | || |||||||||| |||||||||| | | ||||||||||    
T  20488588 gaatgcactgtgtgagttctctatttatagagatagtttacaactaataagtgagaaactttggaaacaagtaat 20488662  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 152 - 232
Target Start/End: Complemental strand, 9650357 - 9650276
Alignment:
Q  152 acttttggagtaagtaattcacatattagatctagtataaaaatatctc-gatcgagtgccaagatatatcatattgagtac 232  Q
    ||||| |||| ||||||||| |||||||||||||||| |||||||||||  || ||||  ||| ||||||||||||||||||    
T  9650357 actttgggagcaagtaattctcatattagatctagtacaaaaatatctcaaattgagtctcaaaatatatcatattgagtac 9650276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 95 - 179
Target Start/End: Original strand, 13337388 - 13337470
Alignment:
Q  95 atagagaaaattcacaactaatatgtgagaaactctaggaacaagtaattacatattacttttggagtaagtaattcacatatta 179  Q
    |||||||||||| ||||||||||||||||||||| |  |||| |||||||  |||||| ||| |||  |||||||||||||||||    
T  13337388 atagagaaaatttacaactaatatgtgagaaacttttagaactagtaatt--atattaatttgggaacaagtaattcacatatta 13337470  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 87 - 144
Target Start/End: Original strand, 19640957 - 19641014
Alignment:
Q  87 ctctatttatagagaaaattcacaactaatatgtgagaaactctaggaacaagtaatt 144  Q
    ||||||||||||||||| ||||||||||||| |||||||||| | ||| |||||||||    
T  19640957 ctctatttatagagaaagttcacaactaataagtgagaaactttgggagcaagtaatt 19641014  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 152 - 232
Target Start/End: Original strand, 27256934 - 27257015
Alignment:
Q  152 acttttggagtaagtaattcacatattagatctagtataaaaatatctc-gatcgagtgccaagatatatcatattgagtac 232  Q
    ||||| |||| ||||||||| |||||||||||||||| |||||||||||  || ||||  ||| ||||||||||||||||||    
T  27256934 actttgggagcaagtaattctcatattagatctagtacaaaaatatctcaaattgagtctcaaaatatatcatattgagtac 27257015  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 80 - 128
Target Start/End: Original strand, 36477621 - 36477669
Alignment:
Q  80 gtgagttctctatttatagagaaaattcacaactaatatgtgagaaact 128  Q
    ||||| |||||||||||||||||| ||||||||||||| ||||||||||    
T  36477621 gtgagctctctatttatagagaaatttcacaactaataggtgagaaact 36477669  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 80 - 144
Target Start/End: Complemental strand, 40864806 - 40864742
Alignment:
Q  80 gtgagttctctatttatagagaaaattcacaactaatatgtgagaaactctaggaacaagtaatt 144  Q
    ||||| |||||||||||||||||| ||||||||||||| ||||| |||| | ||| |||||||||    
T  40864806 gtgagctctctatttatagagaaagttcacaactaataagtgagtaactttgggagcaagtaatt 40864742  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 6 - 53
Target Start/End: Original strand, 3046168 - 3046215
Alignment:
Q  6 aacacaagctggagggagaagagagaaagagttctcgacaactcaata 53  Q
    ||||||||||| ||||||||||||||||||||| ||| ||||||||||    
T  3046168 aacacaagctgaagggagaagagagaaagagttatcgccaactcaata 3046215  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 69 - 128
Target Start/End: Original strand, 20485227 - 20485286
Alignment:
Q  69 gaatgcactacgtgagttctctatttatagagaaaattcacaactaatatgtgagaaact 128  Q
    |||||||||  |||||||||||||||||||||| | || |||||||||| ||||||||||    
T  20485227 gaatgcactgtgtgagttctctatttatagagatagtttacaactaataagtgagaaact 20485286  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 6 - 53
Target Start/End: Original strand, 21671792 - 21671839
Alignment:
Q  6 aacacaagctggagggagaagagagaaagagttctcgacaactcaata 53  Q
    |||||||||||||||||||||||||||| |||||||  ||||||||||    
T  21671792 aacacaagctggagggagaagagagaaaaagttctcagcaactcaata 21671839  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 18 - 52
Target Start/End: Original strand, 8268907 - 8268941
Alignment:
Q  18 agggagaagagagaaagagttctcgacaactcaat 52  Q
    |||||||||||||||||||||||||||||||||||    
T  8268907 agggagaagagagaaagagttctcgacaactcaat 8268941  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 163 - 232
Target Start/End: Complemental strand, 10488683 - 10488613
Alignment:
Q  163 aagtaattcacatattagatctagtataaaaatatctc-gatcgagtgccaagatatatcatattgagtac 232  Q
    ||||||| |||||||||||| ||||| |||||||||||  || |||| |||| ||||||||||||||||||    
T  10488683 aagtaatgcacatattagatttagtagaaaaatatctcaaattgagtaccaaaatatatcatattgagtac 10488613  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 86 - 128
Target Start/End: Complemental strand, 11017518 - 11017476
Alignment:
Q  86 tctctatttatagagaaaattcacaactaatatgtgagaaact 128  Q
    |||||||||||| ||||||||||||||||||| ||||||||||    
T  11017518 tctctatttatatagaaaattcacaactaataagtgagaaact 11017476  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 69 - 143
Target Start/End: Complemental strand, 16459835 - 16459761
Alignment:
Q  69 gaatgcactacgtgagttctctatttatagagaaaattcacaactaatatgtgagaaactctaggaacaagtaat 143  Q
    |||||||||  ||||||||||||||||||| || | || |||||||||| |||||||||| | | ||||||||||    
T  16459835 gaatgcactgtgtgagttctctatttatagggatagtttacaactaataagtgagaaactttggaaacaagtaat 16459761  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 86 - 144
Target Start/End: Original strand, 18385145 - 18385203
Alignment:
Q  86 tctctatttatagagaaaattcacaactaatatgtgagaaactctaggaacaagtaatt 144  Q
    |||||||||||||||||| ||||||| | ||| |||||||||| | |||||||||||||    
T  18385145 tctctatttatagagaaagttcacaattgatacgtgagaaacttttggaacaagtaatt 18385203  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 95 - 179
Target Start/End: Original strand, 13345293 - 13345375
Alignment:
Q  95 atagagaaaattcacaactaatatgtgagaaactctaggaacaagtaattacatattacttttggagtaagtaattcacatatta 179  Q
    |||||||||||| ||||||||||||||||||||| |   ||| |||||||  |||||| ||| |||  |||||||||||||||||    
T  13345293 atagagaaaatttacaactaatatgtgagaaactttgacaactagtaatt--atattaatttgggaacaagtaattcacatatta 13345375  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 2 - 47
Target Start/End: Original strand, 15973347 - 15973392
Alignment:
Q  2 cgttaacacaagctggagggagaagagagaaagagttctcgacaac 47  Q
    |||||||||||| || |||||||||| |||||||||||||||||||    
T  15973347 cgttaacacaagttgaagggagaagatagaaagagttctcgacaac 15973392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #47
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 80 - 116
Target Start/End: Complemental strand, 29727247 - 29727211
Alignment:
Q  80 gtgagttctctatttatagagaaaattcacaactaat 116  Q
    ||||| |||||||||||||||||||||||||||||||    
T  29727247 gtgagctctctatttatagagaaaattcacaactaat 29727211  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #48
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 152 - 226
Target Start/End: Original strand, 15565611 - 15565686
Alignment:
Q  152 acttttggagtaagtaattcacatattagatctagtataaaaatatctc-gatcgagtgccaagatatatcatatt 226  Q
    ||||||||| |||| ||||||||||| | |||||||| |||||||||||  || |||| |||| ||||||||||||    
T  15565611 acttttggaataagaaattcacatatgaaatctagtacaaaaatatctcaaattgagtaccaaaatatatcatatt 15565686  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #49
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 163 - 201
Target Start/End: Original strand, 1043927 - 1043965
Alignment:
Q  163 aagtaattcacatattagatctagtataaaaatatctcg 201  Q
    ||||||||||| |||||||||||||| ||||||||||||    
T  1043927 aagtaattcacgtattagatctagtacaaaaatatctcg 1043965  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #50
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 18 - 52
Target Start/End: Original strand, 4930833 - 4930867
Alignment:
Q  18 agggagaagagagaaagagttctcgacaactcaat 52  Q
    |||||||||||||||||||||| ||||||||||||    
T  4930833 agggagaagagagaaagagttcccgacaactcaat 4930867  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #51
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 152 - 232
Target Start/End: Original strand, 8076747 - 8076829
Alignment:
Q  152 acttttggagtaagtaattcacatattagatctagta-taaaaatatctc-gatcgagtgccaagatatatcatattgagtac 232  Q
    ||||| |||| |||||||||| |||||||||||||||  |||||||||||  || ||||  ||| ||||||||||||||||||    
T  8076747 actttgggagcaagtaattcatatattagatctagtacaaaaaatatctcaaattgagtttcaaaatatatcatattgagtac 8076829  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #52
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 165 - 231
Target Start/End: Complemental strand, 10499481 - 10499415
Alignment:
Q  165 gtaattcacatattagatctagtataaaaatatctcgatcgagtgccaagatatatcatattgagta 231  Q
    |||||||||||||||||| ||||| ||||||||||| ||  ||| |||| |||||| || |||||||    
T  10499481 gtaattcacatattagatttagtacaaaaatatctcaattaagtaccaaaatatattatgttgagta 10499415  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #53
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 165 - 231
Target Start/End: Complemental strand, 10504510 - 10504444
Alignment:
Q  165 gtaattcacatattagatctagtataaaaatatctcgatcgagtgccaagatatatcatattgagta 231  Q
    |||||||||||||||||| ||||| ||||||||||| ||  ||| |||| |||||| || |||||||    
T  10504510 gtaattcacatattagatttagtacaaaaatatctcaattaagtaccaaaatatattatgttgagta 10504444  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #54
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 163 - 197
Target Start/End: Original strand, 11297461 - 11297495
Alignment:
Q  163 aagtaattcacatattagatctagtataaaaatat 197  Q
    |||||||||||||||||||||||||| ||||||||    
T  11297461 aagtaattcacatattagatctagtacaaaaatat 11297495  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #55
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 69 - 143
Target Start/End: Complemental strand, 14928090 - 14928016
Alignment:
Q  69 gaatgcactacgtgagttctctatttatagagaaaattcacaactaatatgtgagaaactctaggaacaagtaat 143  Q
    |||||||||  |||||| |||||||||||||||   || |||||||||| |||||||||| | | ||||||||||    
T  14928090 gaatgcactgtgtgagtcctctatttatagagatggtttacaactaataagtgagaaactttggaaacaagtaat 14928016  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #56
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 69 - 143
Target Start/End: Complemental strand, 15351556 - 15351482
Alignment:
Q  69 gaatgcactacgtgagttctctatttatagagaaaattcacaactaatatgtgagaaactctaggaacaagtaat 143  Q
    |||||||||  |||||| |||||||||||||||   || |||||||||| |||||||||| | | ||||||||||    
T  15351556 gaatgcactgtgtgagtcctctatttatagagatggtttacaactaataagtgagaaactttggaaacaagtaat 15351482  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #57
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 18 - 52
Target Start/End: Original strand, 27238762 - 27238796
Alignment:
Q  18 agggagaagagagaaagagttctcgacaactcaat 52  Q
    |||||||||||||||||||||| ||||||||||||    
T  27238762 agggagaagagagaaagagttcccgacaactcaat 27238796  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #58
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 152 - 229
Target Start/End: Complemental strand, 40864760 - 40864682
Alignment:
Q  152 acttttggagtaagtaattcacatattagatctagtataaaaatatctc-gatcgagtgccaagatatatcatattgag 229  Q
    ||||| |||| ||||||||| |||||||||| ||||| |||||||||||  || ||||  ||| |||||||||||||||    
T  40864760 actttgggagcaagtaattctcatattagatttagtacaaaaatatctcaaattgagtctcaaaatatatcatattgag 40864682  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #59
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 18 - 52
Target Start/End: Complemental strand, 42626072 - 42626038
Alignment:
Q  18 agggagaagagagaaagagttctcgacaactcaat 52  Q
    |||||||||||||||||||||| ||||||||||||    
T  42626072 agggagaagagagaaagagttcccgacaactcaat 42626038  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #60
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 23 - 56
Target Start/End: Complemental strand, 6590502 - 6590469
Alignment:
Q  23 gaagagagaaagagttctcgacaactcaatataa 56  Q
    ||||||| ||||||||||||||||||||||||||    
T  6590502 gaagagacaaagagttctcgacaactcaatataa 6590469  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #61
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 95 - 128
Target Start/End: Original strand, 13337984 - 13338017
Alignment:
Q  95 atagagaaaattcacaactaatatgtgagaaact 128  Q
    |||||||||||| |||||||||||||||||||||    
T  13337984 atagagaaaatttacaactaatatgtgagaaact 13338017  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #62
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 163 - 232
Target Start/End: Complemental strand, 14928022 - 14927953
Alignment:
Q  163 aagtaattcacatattagatctagtataaaaatatctcgatcgagtgccaagatatatcatattgagtac 232  Q
    ||||||| ||| ||||||||||||||  |||||||||| || |||| |||| |||||| ||||| |||||    
T  14928022 aagtaatgcacctattagatctagtactaaaatatctcaattgagtaccaaaatatattatattaagtac 14927953  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #63
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 163 - 232
Target Start/End: Complemental strand, 15351488 - 15351419
Alignment:
Q  163 aagtaattcacatattagatctagtataaaaatatctcgatcgagtgccaagatatatcatattgagtac 232  Q
    ||||||| ||| ||||||||||||||  |||||||||| || |||| |||| |||||| ||||| |||||    
T  15351488 aagtaatgcacctattagatctagtactaaaatatctcaattgagtaccaaaatatattatattaagtac 15351419  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #64
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 163 - 232
Target Start/End: Complemental strand, 29727186 - 29727117
Alignment:
Q  163 aagtaattcacatattagatctagtataaaaatatctcgatcgagtgccaagatatatcatattgagtac 232  Q
    |||||| ||||||||||| | ||||| |||||||| || || |||| |||| |||||| |||||||||||    
T  29727186 aagtaactcacatattaggtatagtacaaaaatatttcaattgagtaccaaaatatattatattgagtac 29727117  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #65
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 18 - 50
Target Start/End: Original strand, 4580113 - 4580145
Alignment:
Q  18 agggagaagagagaaagagttctcgacaactca 50  Q
    ||||||||||||||||||||||| |||||||||    
T  4580113 agggagaagagagaaagagttcttgacaactca 4580145  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 100; Significance: 2e-49; HSPs: 66)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 100; E-Value: 2e-49
Query Start/End: Original strand, 2 - 232
Target Start/End: Complemental strand, 35456462 - 35456234
Alignment:
Q  2 cgttaacacaagctggagggagaagagagaaagagttctcgacaactcaatataaccctt--gtgtctggaatgcactacgtgagttctctatttataga 99  Q
    ||||||||||||||||||||||||||||||||||||| |||||||||||||| |||  ||  |||| |||||||||||| |||| |||||||||||||||    
T  35456462 cgttaacacaagctggagggagaagagagaaagagttatcgacaactcaataaaactatttggtgtgtggaatgcactatgtgaattctctatttataga 35456363  T
Q  100 gaaaattcacaactaatatgtgagaaactctaggaacaagtaattacatattacttttggagtaagtaattcacatattagatctagtataaaaatatct 199  Q
    |||||||||||||||||| | |||||||| | ||||||||||||   | ||||||||  || ||||||||||||||||||||||| ||| |||||  |||    
T  35456362 gaaaattcacaactaataag-gagaaactttgggaacaagtaat---acattactttgagattaagtaattcacatattagatcttgtacaaaaacttct 35456267  T
Q  200 cgatcgagtgccaagatatatcatattgagtac 232  Q
    | |  |||| |||| |||||| || ||||||||    
T  35456266 caactgagtaccaaaatatattatgttgagtac 35456234  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 74; E-Value: 5e-34
Query Start/End: Original strand, 88 - 200
Target Start/End: Complemental strand, 47540954 - 47540841
Alignment:
Q  88 tctatttatagagaaaattcacaactaatatgtgagaaactctaggaacaagtaatt-acatattacttttggagtaagtaattcacatattagatctag 186  Q
    ||||||||||||||||||||||||||||||||||||||||| | ||||||||||||| | ||||||||||  || ||||||||| |||||||||||||||    
T  47540954 tctatttatagagaaaattcacaactaatatgtgagaaactttgggaacaagtaattaaaatattactttgagactaagtaatttacatattagatctag 47540855  T
Q  187 tataaaaatatctc 200  Q
    || |||||||||||    
T  47540854 tacaaaaatatctc 47540841  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 69 - 232
Target Start/End: Complemental strand, 11997460 - 11997301
Alignment:
Q  69 gaatgcactacgtgagttctctatttatagagaaaattcacaactaatatgtgagaaactctaggaacaagtaattacatattacttttggagtaagtaa 168  Q
    ||||| |||||||||| ||||||||||||||||||||||||||||||||| ||||||||| | ||||||||||||   |  ||| |||  || ||| |||    
T  11997460 gaatgtactacgtgagctctctatttatagagaaaattcacaactaatat-tgagaaactttgggaacaagtaat---actttattttgagattaattaa 11997365  T
Q  169 ttcacatattagatctagtataaaaatatctcgatcgagtgccaagatatatcatattgagtac 232  Q
    ||||||| |||||||| ||| ||||||||||| || | || | || ||||||||||||||||||    
T  11997364 ttcacatgttagatcttgtacaaaaatatctcaattgtgtacgaaaatatatcatattgagtac 11997301  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 102 - 200
Target Start/End: Complemental strand, 47541356 - 47541257
Alignment:
Q  102 aaattcacaactaatatgtgagaaactctaggaacaagtaatt-acatattacttttggagtaagtaattcacatattagatctagtataaaaatatctc 200  Q
    ||||||||||||||||||||| ||||| | ||||||||||||| | |||||||||| ||| ||||||||||||| |||| |||||||| |||||||||||    
T  47541356 aaattcacaactaatatgtgaaaaactttgggaacaagtaatttaaatattactttaggattaagtaattcacaaattatatctagtacaaaaatatctc 47541257  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 62 - 144
Target Start/End: Original strand, 8070312 - 8070394
Alignment:
Q  62 gtgtctggaatgcactacgtgagttctctatttatagagaaaattcacaactaatatgtgagaaactctaggaacaagtaatt 144  Q
    ||||||||||||||||  ||||| |||||||||||||||||| ||||||||||||| |||||||||| | ||| |||||||||    
T  8070312 gtgtctggaatgcactgtgtgagctctctatttatagagaaagttcacaactaataagtgagaaactttgggagcaagtaatt 8070394  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 70 - 152
Target Start/End: Complemental strand, 6595846 - 6595763
Alignment:
Q  70 aatgcactacgtgagttctctatttatagagaaaattcacaactaatatgtgagaaactctaggaacaagtaatt-acatatta 152  Q
    ||||||||  ||||| |||||||||||||||||||||||||||||||| |||| ||||| | ||||||||||||| ||||||||    
T  6595846 aatgcactctgtgagctctctatttatagagaaaattcacaactaataagtgaaaaactttgggaacaagtaattcacatatta 6595763  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 62 - 144
Target Start/End: Original strand, 3034276 - 3034358
Alignment:
Q  62 gtgtctggaatgcactacgtgagttctctatttatagagaaaattcacaactaatatgtgagaaactctaggaacaagtaatt 144  Q
    |||| |||||||||||  ||||| |||||||||||||||||| ||||||||||||| |||||||||| | ||| |||||||||    
T  3034276 gtgtgtggaatgcactgtgtgagctctctatttatagagaaagttcacaactaataagtgagaaactttgggagcaagtaatt 3034358  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 62 - 144
Target Start/End: Original strand, 3673219 - 3673301
Alignment:
Q  62 gtgtctggaatgcactacgtgagttctctatttatagagaaaattcacaactaatatgtgagaaactctaggaacaagtaatt 144  Q
    |||| |||||||||||  ||||| |||||||||||||||||| ||||||||||||| |||||||||| | ||| |||||||||    
T  3673219 gtgtgtggaatgcactgtgtgagctctctatttatagagaaagttcacaactaataagtgagaaactttgggagcaagtaatt 3673301  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 62 - 144
Target Start/End: Original strand, 3693251 - 3693333
Alignment:
Q  62 gtgtctggaatgcactacgtgagttctctatttatagagaaaattcacaactaatatgtgagaaactctaggaacaagtaatt 144  Q
    |||| |||||||||||  ||||| |||||||||||||||||| ||||||||||||| |||||||||| | ||| |||||||||    
T  3693251 gtgtgtggaatgcactgtgtgagctctctatttatagagaaagttcacaactaataagtgagaaactttgggagcaagtaatt 3693333  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 62 - 144
Target Start/End: Original strand, 8888563 - 8888645
Alignment:
Q  62 gtgtctggaatgcactacgtgagttctctatttatagagaaaattcacaactaatatgtgagaaactctaggaacaagtaatt 144  Q
    |||| |||||||||||  ||||| |||||||||||||||||| ||||||||||||| |||||||||| | ||| |||||||||    
T  8888563 gtgtgtggaatgcactgtgtgagctctctatttatagagaaagttcacaactaataagtgagaaactttgggagcaagtaatt 8888645  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 88 - 152
Target Start/End: Original strand, 16023191 - 16023256
Alignment:
Q  88 tctatttatagagaaaattcacaactaatatgtgagaaactctaggaacaagtaatt-acatatta 152  Q
    ||||||||||||||||||||||||||||||||||| ||||| | ||||||||||||| ||||||||    
T  16023191 tctatttatagagaaaattcacaactaatatgtgacaaactttgggaacaagtaattcacatatta 16023256  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 2 - 46
Target Start/End: Original strand, 28125701 - 28125745
Alignment:
Q  2 cgttaacacaagctggagggagaagagagaaagagttctcgacaa 46  Q
    |||||||||||||||||||||||||||||||||||||||||||||    
T  28125701 cgttaacacaagctggagggagaagagagaaagagttctcgacaa 28125745  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 69 - 143
Target Start/End: Complemental strand, 9707045 - 9706971
Alignment:
Q  69 gaatgcactacgtgagttctctatttatagagaaaattcacaactaatatgtgagaaactctaggaacaagtaat 143  Q
    |||||||||  |||||||||||||||||||||| |||| |||||||||| |||||||||| | | ||||||||||    
T  9707045 gaatgcactgtgtgagttctctatttatagagataatttacaactaataagtgagaaactttggaaacaagtaat 9706971  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 63 - 152
Target Start/End: Complemental strand, 12899203 - 12899113
Alignment:
Q  63 tgtctggaatgcactacgtgagttctctatttatagagaaaattcacaactaatatgtgagaaactctaggaacaagtaatt-acatatta 152  Q
    ||||| |||||||||| ||||  ||  ||||||||||||||||||||| |||||| |||||||||| | ||||||||||||| ||||||||    
T  12899203 tgtctagaatgcactatgtgatctcattatttatagagaaaattcacagctaataagtgagaaactttgggaacaagtaattcacatatta 12899113  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 69 - 143
Target Start/End: Complemental strand, 16749374 - 16749300
Alignment:
Q  69 gaatgcactacgtgagttctctatttatagagaaaattcacaactaatatgtgagaaactctaggaacaagtaat 143  Q
    |||||||||  |||||||||||||||||||||| |||| |||||||||| |||||||||| | | ||||||||||    
T  16749374 gaatgcactgtgtgagttctctatttatagagataatttacaactaataagtgagaaactttggaaacaagtaat 16749300  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 69 - 143
Target Start/End: Original strand, 19776525 - 19776599
Alignment:
Q  69 gaatgcactacgtgagttctctatttatagagaaaattcacaactaatatgtgagaaactctaggaacaagtaat 143  Q
    |||||||||  |||||||||||||||||||||| |||| |||||||||| |||||||||| | | ||||||||||    
T  19776525 gaatgcactgtgtgagttctctatttatagagataatttacaactaataagtgagaaactttggaaacaagtaat 19776599  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 90 - 188
Target Start/End: Complemental strand, 47540562 - 47540466
Alignment:
Q  90 tatttatagagaaaattcacaactaatatgtgagaaactctaggaacaagtaattacatattacttttggagtaagtaattcacatattagatctagta 188  Q
    ||||| ||||||||||||||||||||||||||||||||| ||| |||| |||| | || | |||||| ||| ||||||||| ||||||| |||||||||    
T  47540562 tatttttagagaaaattcacaactaatatgtgagaaactttagaaacaggtaaat-ca-aatactttgggattaagtaatttacatatttgatctagta 47540466  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 87 - 144
Target Start/End: Original strand, 8197110 - 8197167
Alignment:
Q  87 ctctatttatagagaaaattcacaactaatatgtgagaaactctaggaacaagtaatt 144  Q
    ||||||||||||||||| ||||||||||||| |||||||||| | |||||||||||||    
T  8197110 ctctatttatagagaaacttcacaactaataggtgagaaactttgggaacaagtaatt 8197167  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 87 - 144
Target Start/End: Original strand, 8223593 - 8223650
Alignment:
Q  87 ctctatttatagagaaaattcacaactaatatgtgagaaactctaggaacaagtaatt 144  Q
    ||||||||||||||||| ||||||||||||| |||||||||| | |||||||||||||    
T  8223593 ctctatttatagagaaacttcacaactaataggtgagaaactttgggaacaagtaatt 8223650  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 80 - 144
Target Start/End: Complemental strand, 10585633 - 10585569
Alignment:
Q  80 gtgagttctctatttatagagaaaattcacaactaatatgtgagaaactctaggaacaagtaatt 144  Q
    ||||| |||||||||||||||||| ||||||||||||| |||||||||| | ||| |||||||||    
T  10585633 gtgagctctctatttatagagaaagttcacaactaataagtgagaaactttgggagcaagtaatt 10585569  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 152 - 242
Target Start/End: Original strand, 3673283 - 3673374
Alignment:
Q  152 acttttggagtaagtaattcacatattagatctagtataaaaatatctc-gatcgagtgccaagatatatcatattgagtacgaaagatata 242  Q
    ||||| |||| ||||||||| |||||||||||||||| |||||||||||  || ||||  ||| |||||||||||||||||| ||| |||||    
T  3673283 actttgggagcaagtaattctcatattagatctagtacaaaaatatctcaaattgagtctcaaaatatatcatattgagtacaaaaaatata 3673374  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 152 - 242
Target Start/End: Original strand, 3693315 - 3693406
Alignment:
Q  152 acttttggagtaagtaattcacatattagatctagtataaaaatatctc-gatcgagtgccaagatatatcatattgagtacgaaagatata 242  Q
    ||||| |||| ||||||||| |||||||||||||||| |||||||||||  || ||||  ||| |||||||||||||||||| ||| |||||    
T  3693315 actttgggagcaagtaattctcatattagatctagtacaaaaatatctcaaattgagtctcaaaatatatcatattgagtacaaaaaatata 3693406  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 10 - 49
Target Start/End: Original strand, 11399964 - 11400003
Alignment:
Q  10 caagctggagggagaagagagaaagagttctcgacaactc 49  Q
    ||||||||||||||||||||||||||||||||||||||||    
T  11399964 caagctggagggagaagagagaaagagttctcgacaactc 11400003  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 80 - 143
Target Start/End: Complemental strand, 37439003 - 37438940
Alignment:
Q  80 gtgagttctctatttatagagaaaattcacaactaatatgtgagaaactctaggaacaagtaat 143  Q
    |||||||||||||||||||||| |||| |||||||||| |||||||||| | | ||||||||||    
T  37439003 gtgagttctctatttatagagataatttacaactaataagtgagaaactttggaaacaagtaat 37438940  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 62 - 144
Target Start/End: Original strand, 8883803 - 8883885
Alignment:
Q  62 gtgtctggaatgcactacgtgagttctctatttatagagaaaattcacaactaatatgtgagaaactctaggaacaagtaatt 144  Q
    |||| |||||||||||  || || ||| |||||||||||||| ||||||||||||| |||||||||| | ||| |||||||||    
T  8883803 gtgtgtggaatgcactgtgtaagctctttatttatagagaaagttcacaactaataagtgagaaactttgggagcaagtaatt 8883885  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 87 - 144
Target Start/End: Original strand, 29886 - 29943
Alignment:
Q  87 ctctatttatagagaaaattcacaactaatatgtgagaaactctaggaacaagtaatt 144  Q
    ||||||||||||| ||| ||||||||||||| |||||||||| | |||||||||||||    
T  29886 ctctatttatagaaaaatttcacaactaataggtgagaaactttgggaacaagtaatt 29943  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 152 - 232
Target Start/End: Original strand, 3034340 - 3034421
Alignment:
Q  152 acttttggagtaagtaattcacatattagatctagtataaaaatatctc-gatcgagtgccaagatatatcatattgagtac 232  Q
    ||||| |||| ||||||||| |||||||||||||||| |||||||||||  || ||||  ||| ||||||||||||||||||    
T  3034340 actttgggagcaagtaattctcatattagatctagtacaaaaatatctcaaattgagtctcaaaatatatcatattgagtac 3034421  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 163 - 232
Target Start/End: Complemental strand, 6595779 - 6595710
Alignment:
Q  163 aagtaattcacatattagatctagtataaaaatatctcgatcgagtgccaagatatatcatattgagtac 232  Q
    |||||||||||||||||||||||||| ||||||||||  || |||| | || |||||| |||||||||||    
T  6595779 aagtaattcacatattagatctagtacaaaaatatcttaattgagtacaaaaatatattatattgagtac 6595710  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 152 - 232
Target Start/End: Original strand, 8070376 - 8070457
Alignment:
Q  152 acttttggagtaagtaattcacatattagatctagtataaaaatatctc-gatcgagtgccaagatatatcatattgagtac 232  Q
    ||||| |||| ||||||||| |||||||||||||||| |||||||||||  || ||||  ||| ||||||||||||||||||    
T  8070376 actttgggagcaagtaattctcatattagatctagtacaaaaatatctcaaattgagtctcaaaatatatcatattgagtac 8070457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 152 - 232
Target Start/End: Original strand, 8883867 - 8883948
Alignment:
Q  152 acttttggagtaagtaattcacatattagatctagtataaaaatatctc-gatcgagtgccaagatatatcatattgagtac 232  Q
    ||||| |||| ||||||||| |||||||||||||||| |||||||||||  || ||||  ||| ||||||||||||||||||    
T  8883867 actttgggagcaagtaattctcatattagatctagtacaaaaatatctcaaattgagtctcaaaatatatcatattgagtac 8883948  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 152 - 232
Target Start/End: Original strand, 8888627 - 8888708
Alignment:
Q  152 acttttggagtaagtaattcacatattagatctagtataaaaatatctc-gatcgagtgccaagatatatcatattgagtac 232  Q
    ||||| |||| ||||||||| |||||||||||||||| |||||||||||  || ||||  ||| ||||||||||||||||||    
T  8888627 actttgggagcaagtaattctcatattagatctagtacaaaaatatctcaaattgagtctcaaaatatatcatattgagtac 8888708  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 90 - 197
Target Start/End: Original strand, 18012001 - 18012110
Alignment:
Q  90 tatttatagagaaaattcacaactaatatgtgagaaactctaggaac-aagt-aattacatattacttttggagtaagtaattcacatattagatctagt 187  Q
    ||||||||||||||||||||||||||||||||| ||||| | |  || |||| ||| |  |||||||||  ||  |||||||||||||||||||| ||||    
T  18012001 tatttatagagaaaattcacaactaatatgtgataaactttggatacaaagtaaatcaagtattactttgcgaacaagtaattcacatattagatttagt 18012100  T
Q  188 ataaaaatat 197  Q
    | ||||||||    
T  18012101 agaaaaatat 18012110  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 87 - 144
Target Start/End: Complemental strand, 18350211 - 18350154
Alignment:
Q  87 ctctatttatagagaaaattcacaactaatatgtgagaaactctaggaacaagtaatt 144  Q
    ||||||||||||||||| ||| ||||||||| |||||||||| | |||||||||||||    
T  18350211 ctctatttatagagaaacttcgcaactaataggtgagaaactttgggaacaagtaatt 18350154  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 82 - 143
Target Start/End: Original strand, 49020106 - 49020167
Alignment:
Q  82 gagttctctatttatagagaaaattcacaactaatatgtgagaaactctaggaacaagtaat 143  Q
    ||||||| |||||||||||||||||||||||||||| |||| ||| | | ||||||||||||    
T  49020106 gagttctatatttatagagaaaattcacaactaataagtgataaattttgggaacaagtaat 49020167  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 9 - 53
Target Start/End: Complemental strand, 10708197 - 10708153
Alignment:
Q  9 acaagctggagggagaagagagaaagagttctcgacaactcaata 53  Q
    ||||| ||||||||||||||||||||||||||| |||||||||||    
T  10708197 acaagatggagggagaagagagaaagagttctctacaactcaata 10708153  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 80 - 144
Target Start/End: Complemental strand, 14425286 - 14425222
Alignment:
Q  80 gtgagttctctatttatagagaaaattcacaactaatatgtgagaaactctaggaacaagtaatt 144  Q
    ||||| ||||||||| |||||||| |||||| |||||| |||||||||| | |||||||||||||    
T  14425286 gtgagctctctatttctagagaaacttcacagctaataggtgagaaactttgggaacaagtaatt 14425222  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 80 - 143
Target Start/End: Complemental strand, 8488834 - 8488771
Alignment:
Q  80 gtgagttctctatttatagagaaaattcacaactaatatgtgagaaactctaggaacaagtaat 143  Q
    |||||||||||||||||||||| | || |||||||||| |||||||||| | | ||||||||||    
T  8488834 gtgagttctctatttatagagatagtttacaactaataagtgagaaactttggaaacaagtaat 8488771  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 2 - 53
Target Start/End: Complemental strand, 17025605 - 17025554
Alignment:
Q  2 cgttaacacaagctggagggagaagagagaaagagttctcgacaactcaata 53  Q
    ||||||||||||| ||||||| ||||| ||||||||||||||||| ||||||    
T  17025605 cgttaacacaagccggagggataagagggaaagagttctcgacaattcaata 17025554  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 87 - 138
Target Start/End: Original strand, 51922992 - 51923043
Alignment:
Q  87 ctctatttatagagaaaattcacaactaatatgtgagaaactctaggaacaa 138  Q
    ||||||||||||||||| ||||||||||||| |||||||||| | |||||||    
T  51922992 ctctatttatagagaaacttcacaactaataggtgagaaactttgggaacaa 51923043  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 81 - 127
Target Start/End: Complemental strand, 4106768 - 4106722
Alignment:
Q  81 tgagttctctatttatagagaaaattcacaactaatatgtgagaaac 127  Q
    ||||||||||||||||||||| |||| |||||||||| |||||||||    
T  4106768 tgagttctctatttatagagagaatttacaactaataagtgagaaac 4106722  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 81 - 127
Target Start/End: Complemental strand, 4110620 - 4110574
Alignment:
Q  81 tgagttctctatttatagagaaaattcacaactaatatgtgagaaac 127  Q
    ||||||||||||||||||||| |||| |||||||||| |||||||||    
T  4110620 tgagttctctatttatagagagaatttacaactaataagtgagaaac 4110574  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 81 - 127
Target Start/End: Original strand, 15965707 - 15965753
Alignment:
Q  81 tgagttctctatttatagagaaaattcacaactaatatgtgagaaac 127  Q
    ||||||||||||||||||||| |||| |||||||||| |||||||||    
T  15965707 tgagttctctatttatagagagaatttacaactaataagtgagaaac 15965753  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 81 - 127
Target Start/End: Original strand, 15969631 - 15969677
Alignment:
Q  81 tgagttctctatttatagagaaaattcacaactaatatgtgagaaac 127  Q
    ||||||||||||||||||||| |||| |||||||||| |||||||||    
T  15969631 tgagttctctatttatagagagaatttacaactaataagtgagaaac 15969677  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 81 - 127
Target Start/End: Original strand, 15973555 - 15973601
Alignment:
Q  81 tgagttctctatttatagagaaaattcacaactaatatgtgagaaac 127  Q
    ||||||||||||||||||||| |||| |||||||||| |||||||||    
T  15973555 tgagttctctatttatagagagaatttacaactaataagtgagaaac 15973601  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 69 - 143
Target Start/End: Complemental strand, 22758634 - 22758560
Alignment:
Q  69 gaatgcactacgtgagttctctatttatagagaaaattcacaactaatatgtgagaaactctaggaacaagtaat 143  Q
    |||||||||  |||||||||||||||||||||| | || |||||||||| |||||||| | | | ||||||||||    
T  22758634 gaatgcactgtgtgagttctctatttatagagatagtttacaactaataagtgagaaattttggaaacaagtaat 22758560  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 152 - 200
Target Start/End: Complemental strand, 10585587 - 10585539
Alignment:
Q  152 acttttggagtaagtaattcacatattagatctagtataaaaatatctc 200  Q
    ||||| |||| ||||||||| |||||||||||||||| |||||||||||    
T  10585587 actttgggagcaagtaattctcatattagatctagtacaaaaatatctc 10585539  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 80 - 144
Target Start/End: Complemental strand, 45903988 - 45903924
Alignment:
Q  80 gtgagttctctatttatagagaaaattcacaactaatatgtgagaaactctaggaacaagtaatt 144  Q
    ||||| |||||||||||||||||| |||  || ||||| |||||||||| ||||| |||||||||    
T  45903988 gtgagctctctatttatagagaaagttccaaagtaataagtgagaaactttaggagcaagtaatt 45903924  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 18 - 53
Target Start/End: Complemental strand, 12965371 - 12965336
Alignment:
Q  18 agggagaagagagaaagagttctcgacaactcaata 53  Q
    |||||||||||||||||||||| |||||||||||||    
T  12965371 agggagaagagagaaagagttcccgacaactcaata 12965336  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 181 - 232
Target Start/End: Complemental strand, 14425220 - 14425169
Alignment:
Q  181 atctagtataaaaatatctcgatcgagtgccaagatatatcatattgagtac 232  Q
    |||||||| ||||||||||| || |||| |||| ||||||||||||||||||    
T  14425220 atctagtacaaaaatatctcaattgagtaccaaaatatatcatattgagtac 14425169  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 167 - 237
Target Start/End: Complemental strand, 53502518 - 53502447
Alignment:
Q  167 aattcacatattagatctagtataaaaatatctc-gatcgagtgccaagatatatcatattgagtacgaaag 237  Q
    |||||||||||||||| ||||| |||||||||||  || ||||||||| ||||||| ||| |||||| ||||    
T  53502518 aattcacatattagatatagtacaaaaatatctcaaattgagtgccaaaatatatcctatcgagtacaaaag 53502447  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 18 - 52
Target Start/End: Complemental strand, 7570700 - 7570666
Alignment:
Q  18 agggagaagagagaaagagttctcgacaactcaat 52  Q
    |||||||||||||||||||||| ||||||||||||    
T  7570700 agggagaagagagaaagagttcccgacaactcaat 7570666  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #52
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 18 - 52
Target Start/End: Complemental strand, 23660948 - 23660914
Alignment:
Q  18 agggagaagagagaaagagttctcgacaactcaat 52  Q
    |||||||||||||||||||||| ||||||||||||    
T  23660948 agggagaagagagaaagagttcccgacaactcaat 23660914  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #53
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 18 - 52
Target Start/End: Complemental strand, 23665607 - 23665573
Alignment:
Q  18 agggagaagagagaaagagttctcgacaactcaat 52  Q
    |||||||||||||||||||||| ||||||||||||    
T  23665607 agggagaagagagaaagagttcccgacaactcaat 23665573  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #54
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 18 - 52
Target Start/End: Complemental strand, 24037855 - 24037821
Alignment:
Q  18 agggagaagagagaaagagttctcgacaactcaat 52  Q
    |||||||||||||||||||||| ||||||||||||    
T  24037855 agggagaagagagaaagagttcccgacaactcaat 24037821  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #55
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 2 - 48
Target Start/End: Complemental strand, 25726277 - 25726231
Alignment:
Q  2 cgttaacacaagctggagggagaagagagaaagagttctcgacaact 48  Q
    ||||||||||||| | |  ||||||||||||||||||||||||||||    
T  25726277 cgttaacacaagccgaaatgagaagagagaaagagttctcgacaact 25726231  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #56
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 18 - 52
Target Start/End: Original strand, 46964623 - 46964657
Alignment:
Q  18 agggagaagagagaaagagttctcgacaactcaat 52  Q
    |||||||||||||||||||||| ||||||||||||    
T  46964623 agggagaagagagaaagagttcccgacaactcaat 46964657  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #57
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 18 - 52
Target Start/End: Original strand, 55326389 - 55326423
Alignment:
Q  18 agggagaagagagaaagagttctcgacaactcaat 52  Q
    |||||||||||||||||||||| ||||||||||||    
T  55326389 agggagaagagagaaagagttcccgacaactcaat 55326423  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #58
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 163 - 200
Target Start/End: Complemental strand, 12899129 - 12899092
Alignment:
Q  163 aagtaattcacatattagatctagtataaaaatatctc 200  Q
    |||||||||||||||||||| ||||| |||||||||||    
T  12899129 aagtaattcacatattagatttagtacaaaaatatctc 12899092  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #59
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 163 - 200
Target Start/End: Original strand, 16023240 - 16023277
Alignment:
Q  163 aagtaattcacatattagatctagtataaaaatatctc 200  Q
    |||||||||||||||||||||||||| || ||||||||    
T  16023240 aagtaattcacatattagatctagtacaacaatatctc 16023277  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #60
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 75 - 128
Target Start/End: Original strand, 19340119 - 19340172
Alignment:
Q  75 actacgtgagttctctatttatagagaaaattcacaactaatatgtgagaaact 128  Q
    |||| ||||| | |||||||||| ||||||||||||| |||||||| |||||||    
T  19340119 actatgtgagctatctatttataaagaaaattcacaaataatatgttagaaact 19340172  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #61
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 4 - 57
Target Start/End: Complemental strand, 32746296 - 32746243
Alignment:
Q  4 ttaacacaagctggagggagaagagagaaagagttctcgacaactcaatataac 57  Q
    ||||||||| ||| || ||||||||||||||| || |||||||||||| |||||    
T  32746296 ttaacacaaactgaagagagaagagagaaagaattatcgacaactcaacataac 32746243  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #62
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 152 - 232
Target Start/End: Complemental strand, 45903942 - 45903861
Alignment:
Q  152 acttttggagtaagtaattcacatattagatctagtataaaaatatctc-gatcgagtgccaagatatatcatattgagtac 232  Q
    ||||| |||| ||||||||| ||||||||||||| || |||||||||||  || ||||  ||| ||||||| ||||||||||    
T  45903942 actttaggagcaagtaattctcatattagatctaatacaaaaatatctcaaattgagtctcaaaatatatcttattgagtac 45903861  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #63
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 62 - 118
Target Start/End: Original strand, 429062 - 429118
Alignment:
Q  62 gtgtctggaatgcactacgtgagttctctatttatagagaaaattcacaactaatat 118  Q
    |||| ||||||| |||  ||||| ||| |||||||||||||||||||||| ||||||    
T  429062 gtgtgtggaatgaactttgtgagctctttatttatagagaaaattcacaagtaatat 429118  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #64
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 18 - 50
Target Start/End: Original strand, 3419600 - 3419632
Alignment:
Q  18 agggagaagagagaaagagttctcgacaactca 50  Q
    |||||||||||||||||||||| ||||||||||    
T  3419600 agggagaagagagaaagagttcccgacaactca 3419632  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #65
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 23 - 51
Target Start/End: Complemental strand, 12112146 - 12112118
Alignment:
Q  23 gaagagagaaagagttctcgacaactcaa 51  Q
    |||||||||||||||||||||||||||||    
T  12112146 gaagagagaaagagttctcgacaactcaa 12112118  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #66
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 80 - 128
Target Start/End: Original strand, 53358757 - 53358805
Alignment:
Q  80 gtgagttctctatttatagagaaaattcacaactaatatgtgagaaact 128  Q
    ||||| |||||||||||| ||||| ||||||||||||| |||| |||||    
T  53358757 gtgagctctctatttataaagaaagttcacaactaataagtgaaaaact 53358805  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0008 (Bit Score: 96; Significance: 4e-47; HSPs: 1)
Name: scaffold0008
Description:

Target: scaffold0008; HSP #1
Raw Score: 96; E-Value: 4e-47
Query Start/End: Original strand, 10 - 232
Target Start/End: Original strand, 256391 - 256612
Alignment:
Q  10 caagctggagggagaagagagaaagagttctcgacaactcaatataaccctt--gtgtctggaatgcactacgtgagttctctatttatagagaaaattc 107  Q
    |||| |||||| ||||||||||||||||| |||||||||||||| ||| |||  |||| || ||||||||| |||| |||||||||||||||||| ||||    
T  256391 caagttggaggaagaagagagaaagagttatcgacaactcaatagaactctttggtgtgtgaaatgcactatgtgatttctctatttatagagaatattc 256490  T
Q  108 acaactaatatgtgagaaactctaggaacaagtaattacatattacttttggagtaagtaattcacatattagatctagtataaaaatatctcgatcgag 207  Q
    |||||||||| |||||||||| | ||||||||||||   | ||||||||  || || ||||||||||||||||||||| || |||||||| || || |||    
T  256491 acaactaataagtgagaaactttgggaacaagtaat---acattactttgagattaggtaattcacatattagatctaatacaaaaatatttcaattgag 256587  T
Q  208 tgccaagatatatcatattgagtac 232  Q
    ||| || |||||| |||||||||||    
T  256588 tgcgaaaatatattatattgagtac 256612  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 81; Significance: 3e-38; HSPs: 39)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 81; E-Value: 3e-38
Query Start/End: Original strand, 4 - 231
Target Start/End: Complemental strand, 15991216 - 15990990
Alignment:
Q  4 ttaacacaagctggagggagaagagagaaagagttctcgacaactcaatataaccctt--gtgtctggaatgcactacgtgagttctctatttatagaga 101  Q
    |||||||||  |||||||||||||||||||||||| |||| ||||||||| ||  |||  |||| ||||||||||||   | ||||||||||| ||||||    
T  15991216 ttaacacaacttggagggagaagagagaaagagttgtcgataactcaatagaaatctttggtgtgtggaatgcactatacgtgttctctatttgtagaga 15991117  T
Q  102 aaattcacaactaatatgtgagaaactctaggaacaagtaattacatattacttttggagtaagtaattcacatattagatctagtataaaaatatctcg 201  Q
    |||||||||||||||| |||||||||| | | ||||||||||   | |||| ||| | | ||||||||||||| |||||| ||||||||||||||||||     
T  15991116 aaattcacaactaataagtgagaaactttggaaacaagtaat---acattattttggtattaagtaattcacaaattagacctagtataaaaatatctca 15991020  T
Q  202 atcgagtgccaagatatatcatattgagta 231  Q
    || ||||   || |||||| ||||||||||    
T  15991019 attgagtaataaaatatattatattgagta 15990990  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 80 - 231
Target Start/End: Complemental strand, 2759819 - 2759671
Alignment:
Q  80 gtgagttctctatttatagagaaaattcacaactaatatgtgagaaactctaggaacaagtaattacatattacttttggagtaagtaattcacatatta 179  Q
    ||||| ||||| |||| ||||||||||||||||||||| || ||||||| |  |||||||||||   | |||||||| | | ||||||||||||||||||    
T  2759819 gtgagctctctgtttacagagaaaattcacaactaataagtaagaaactttttgaacaagtaat---acattactttggcattaagtaattcacatatta 2759723  T
Q  180 gatctagtataaaaatatctcgatcgagtgccaagatatatcatattgagta 231  Q
    |||||| || ||||||||||| || || | |||| ||||||  |||||||||    
T  2759722 gatctaataaaaaaatatctcaattgaataccaaaatatattttattgagta 2759671  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 82 - 200
Target Start/End: Complemental strand, 9751225 - 9751106
Alignment:
Q  82 gagttctctatttatagagaaaattcacaactaatatgtgagaaactctaggaacaagtaatt-acatattacttttggagtaagtaattcacatattag 180  Q
    |||||||||||||||| |||||||||||||||||||| || |||||| | |  |||| ||||| |||||||||||| |||  |||||||||||  |||||    
T  9751225 gagttctctatttatatagaaaattcacaactaatatatgtgaaactttggacacaaataattcacatattactttgggatgaagtaattcactcattag 9751126  T
Q  181 atctagtataaaaatatctc 200  Q
    ||| | || |||||||||||    
T  9751125 atccaatacaaaaatatctc 9751106  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 69 - 144
Target Start/End: Original strand, 16625056 - 16625131
Alignment:
Q  69 gaatgcactacgtgagttctctatttatagagaaaattcacaactaatatgtgagaaactctaggaacaagtaatt 144  Q
    |||||||||  |||||||||||||||||||||| |||| |||||||||| |||||||||| | |||||||||||||    
T  16625056 gaatgcactgtgtgagttctctatttatagagataatttacaactaataagtgagaaactttgggaacaagtaatt 16625131  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 6 - 56
Target Start/End: Complemental strand, 19994894 - 19994844
Alignment:
Q  6 aacacaagctggagggagaagagagaaagagttctcgacaactcaatataa 56  Q
    |||||||||||||||||||||||||||||||||||| ||||||||||||||    
T  19994894 aacacaagctggagggagaagagagaaagagttctctacaactcaatataa 19994844  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 62 - 152
Target Start/End: Complemental strand, 2862933 - 2862842
Alignment:
Q  62 gtgtctggaatgcactacgtgagttctctatttatagagaaaattcacaactaatatgtgagaaactctaggaacaagtaatt-acatatta 152  Q
    |||| ||||||| |||| ||||| |||||||||||||||||||||||||| || |||||| | |||| | ||||||||||||| ||||||||    
T  2862933 gtgtatggaatgaactatgtgagctctctatttatagagaaaattcacaaatagtatgtgtgcaactttgggaacaagtaattcacatatta 2862842  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 69 - 143
Target Start/End: Complemental strand, 31477158 - 31477084
Alignment:
Q  69 gaatgcactacgtgagttctctatttatagagaaaattcacaactaatatgtgagaaactctaggaacaagtaat 143  Q
    |||||||||  |||||||||||||||||||||| |||| |||||||||| |||||||||| | | ||||||||||    
T  31477158 gaatgcactgtgtgagttctctatttatagagataatttacaactaataagtgagaaactttggaaacaagtaat 31477084  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 163 - 231
Target Start/End: Complemental strand, 2759552 - 2759484
Alignment:
Q  163 aagtaattcacatattagatctagtataaaaatatctcgatcgagtgccaagatatatcatattgagta 231  Q
    ||||||||||||||||||||||| || ||||||||||| || |||| |||| |||||| ||||||||||    
T  2759552 aagtaattcacatattagatctaataaaaaaatatctcaattgagtaccaaaatatattatattgagta 2759484  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 80 - 144
Target Start/End: Original strand, 27073636 - 27073700
Alignment:
Q  80 gtgagttctctatttatagagaaaattcacaactaatatgtgagaaactctaggaacaagtaatt 144  Q
    ||||| |||||||||||| ||||| ||||||||||||| |||||||||| | |||||||||||||    
T  27073636 gtgagctctctatttataaagaaatttcacaactaataggtgagaaactttgggaacaagtaatt 27073700  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 62 - 125
Target Start/End: Complemental strand, 24588639 - 24588576
Alignment:
Q  62 gtgtctggaatgcactacgtgagttctctatttatagagaaaattcacaactaatatgtgagaa 125  Q
    |||| |||||||||||  ||||| ||||||||||||||||||||||| |||||||| |||||||    
T  24588639 gtgtgtggaatgcactgtgtgagctctctatttatagagaaaattcaaaactaataagtgagaa 24588576  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 69 - 143
Target Start/End: Complemental strand, 15704365 - 15704291
Alignment:
Q  69 gaatgcactacgtgagttctctatttatagagaaaattcacaactaatatgtgagaaactctaggaacaagtaat 143  Q
    |||||||||  |||||||||||||||||||||| | || |||||||||| |||||||||| | | ||||||||||    
T  15704365 gaatgcactgtgtgagttctctatttatagagatagtttacaactaataagtgagaaactttggaaacaagtaat 15704291  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 69 - 145
Target Start/End: Complemental strand, 6112213 - 6112137
Alignment:
Q  69 gaatgcactacgtgagttctctatttatagagaaaattcacaactaatatgtgagaaactctaggaacaagtaatta 145  Q
    |||||||||  ||||| |||||||||||| ||||| ||| ||||||||| |||||||||| | ||| ||||||||||    
T  6112213 gaatgcactgtgtgagctctctatttatatagaaagttcccaactaataagtgagaaactttgggagcaagtaatta 6112137  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 80 - 140
Target Start/End: Original strand, 26981246 - 26981306
Alignment:
Q  80 gtgagttctctatttatagagaaaattcacaactaatatgtgagaaactctaggaacaagt 140  Q
    ||||| |||||||||||| ||||| ||||||||||||| |||||||||| | |||||||||    
T  26981246 gtgagctctctatttataaagaaatttcacaactaataggtgagaaactttgggaacaagt 26981306  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 166 - 241
Target Start/End: Complemental strand, 28964206 - 28964130
Alignment:
Q  166 taattcacatattagatctagtataaaaatatctc-gatcgagtgccaagatatatcatattgagtacgaaagatat 241  Q
    ||||||| ||||||||||||||| |||||||||||  || |||| |||| |||||||||||||||||| ||| ||||    
T  28964206 taattcaaatattagatctagtacaaaaatatctcaaattgagtaccaaaatatatcatattgagtacaaaatatat 28964130  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 2 - 49
Target Start/End: Complemental strand, 2759912 - 2759865
Alignment:
Q  2 cgttaacacaagctggagggagaagagagaaagagttctcgacaactc 49  Q
    ||||||||||||| | ||||||||||||||||||||| ||||||||||    
T  2759912 cgttaacacaagccgaagggagaagagagaaagagttatcgacaactc 2759865  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 163 - 198
Target Start/End: Complemental strand, 2882161 - 2882126
Alignment:
Q  163 aagtaattcacatattagatctagtataaaaatatc 198  Q
    ||||||||||||||||||||||||||||||||||||    
T  2882161 aagtaattcacatattagatctagtataaaaatatc 2882126  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 69 - 143
Target Start/End: Original strand, 16761022 - 16761097
Alignment:
Q  69 gaatgcactacgtgagttctctatttata-gagaaaattcacaactaatatgtgagaaactctaggaacaagtaat 143  Q
    |||||||||  |||||||||||||||||| |||| |||| |||||||||| |||||||||| | | ||||||||||    
T  16761022 gaatgcactgtgtgagttctctatttataggagataatttacaactaataagtgagaaactttggaaacaagtaat 16761097  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 6 - 53
Target Start/End: Original strand, 17599966 - 17600013
Alignment:
Q  6 aacacaagctggagggagaagagagaaagagttctcgacaactcaata 53  Q
    |||||||| |||| ||||||||||||||||||| ||||||||||||||    
T  17599966 aacacaagttggatggagaagagagaaagagttttcgacaactcaata 17600013  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 6 - 53
Target Start/End: Original strand, 17914184 - 17914231
Alignment:
Q  6 aacacaagctggagggagaagagagaaagagttctcgacaactcaata 53  Q
    ||||||||||||||||||||| |||||||||||||||| ||| |||||    
T  17914184 aacacaagctggagggagaagtgagaaagagttctcgaaaacacaata 17914231  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 69 - 128
Target Start/End: Complemental strand, 19772466 - 19772407
Alignment:
Q  69 gaatgcactacgtgagttctctatttatagagaaaattcacaactaatatgtgagaaact 128  Q
    |||||||||  |||||||||||||||||||||| | || |||||||||| ||||||||||    
T  19772466 gaatgcactgtgtgagttctctatttatagagatagtttacaactaataagtgagaaact 19772407  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 80 - 143
Target Start/End: Complemental strand, 27324504 - 27324441
Alignment:
Q  80 gtgagttctctatttatagagaaaattcacaactaatatgtgagaaactctaggaacaagtaat 143  Q
    |||||||||||||||||||||| | || |||||||||| |||||||||| | | ||||||||||    
T  27324504 gtgagttctctatttatagagatagtttacaactaataagtgagaaactttggaaacaagtaat 27324441  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 163 - 197
Target Start/End: Complemental strand, 2862858 - 2862824
Alignment:
Q  163 aagtaattcacatattagatctagtataaaaatat 197  Q
    |||||||||||||||||||||||||||||||||||    
T  2862858 aagtaattcacatattagatctagtataaaaatat 2862824  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 69 - 127
Target Start/End: Original strand, 22949872 - 22949930
Alignment:
Q  69 gaatgcactacgtgagttctctatttatagagaaaattcacaactaatatgtgagaaac 127  Q
    |||||||||  |||||||||||||||||||||| |||| | |||||||| |||||||||    
T  22949872 gaatgcactgtgtgagttctctatttatagagataatttataactaataagtgagaaac 22949930  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 69 - 127
Target Start/End: Original strand, 22953828 - 22953886
Alignment:
Q  69 gaatgcactacgtgagttctctatttatagagaaaattcacaactaatatgtgagaaac 127  Q
    |||||||||  |||||||||||||||||||||| |||| | |||||||| |||||||||    
T  22953828 gaatgcactgtgtgagttctctatttatagagataatttataactaataagtgagaaac 22953886  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 69 - 127
Target Start/End: Original strand, 23872316 - 23872374
Alignment:
Q  69 gaatgcactacgtgagttctctatttatagagaaaattcacaactaatatgtgagaaac 127  Q
    |||||||||  |||||||||||||||||||||| |||| | |||||||| |||||||||    
T  23872316 gaatgcactgtgtgagttctctatttatagagataatttataactaataagtgagaaac 23872374  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 69 - 127
Target Start/End: Original strand, 23876272 - 23876330
Alignment:
Q  69 gaatgcactacgtgagttctctatttatagagaaaattcacaactaatatgtgagaaac 127  Q
    |||||||||  |||||||||||||||||||||| |||| | |||||||| |||||||||    
T  23876272 gaatgcactgtgtgagttctctatttatagagataatttataactaataagtgagaaac 23876330  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 6 - 52
Target Start/End: Complemental strand, 12405855 - 12405812
Alignment:
Q  6 aacacaagctggagggagaagagagaaagagttctcgacaactcaat 52  Q
    |||||||||||||||   |||||||||||||||||||||||||||||    
T  12405855 aacacaagctggagg---aagagagaaagagttctcgacaactcaat 12405812  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 80 - 144
Target Start/End: Original strand, 18387583 - 18387647
Alignment:
Q  80 gtgagttctctatttatagagaaaattcacaactaatatgtgagaaactctaggaacaagtaatt 144  Q
    ||||| |||||||||||| ||||| ||||||| ||||| |||||||||| | || ||||||||||    
T  18387583 gtgagctctctatttatacagaaacttcacaattaataggtgagaaactttggggacaagtaatt 18387647  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 62 - 152
Target Start/End: Complemental strand, 2882236 - 2882145
Alignment:
Q  62 gtgtctggaatgcactacgtgagttctctatttatagagaaaattcacaactaatatgtgagaaactctaggaacaagtaatt-acatatta 152  Q
    |||| ||||||| |||| ||||| |||  ||||||||||||||||||||| || |||||| | || | | ||||||||||||| ||||||||    
T  2882236 gtgtatggaatgaactatgtgagctctgaatttatagagaaaattcacaaatagtatgtgtgcaaatttgggaacaagtaattcacatatta 2882145  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 81 - 128
Target Start/End: Original strand, 14073787 - 14073834
Alignment:
Q  81 tgagttctctatttatagagaaaattcacaactaatatgtgagaaact 128  Q
    |||| |||||||||||||||||| |||||||||||||  |||||||||    
T  14073787 tgagctctctatttatagagaaatttcacaactaatagatgagaaact 14073834  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 88 - 143
Target Start/End: Complemental strand, 14322845 - 14322790
Alignment:
Q  88 tctatttatagagaaaattcacaactaatatgtgagaaactctaggaacaagtaat 143  Q
    |||||||||||||| |||| |||||||||| |||||||||| | | ||||||||||    
T  14322845 tctatttatagagataatttacaactaataagtgagaaactttggaaacaagtaat 14322790  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 17 - 52
Target Start/End: Complemental strand, 16835643 - 16835608
Alignment:
Q  17 gagggagaagagagaaagagttctcgacaactcaat 52  Q
    ||||||||||||||||||||||| ||||||||||||    
T  16835643 gagggagaagagagaaagagttcccgacaactcaat 16835608  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #33
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 18 - 52
Target Start/End: Original strand, 11428571 - 11428605
Alignment:
Q  18 agggagaagagagaaagagttctcgacaactcaat 52  Q
    |||||||||||||||||||||| ||||||||||||    
T  11428571 agggagaagagagaaagagttcccgacaactcaat 11428605  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #34
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 18 - 52
Target Start/End: Original strand, 14509584 - 14509618
Alignment:
Q  18 agggagaagagagaaagagttctcgacaactcaat 52  Q
    |||||||||||||||||||||| ||||||||||||    
T  14509584 agggagaagagagaaagagttcccgacaactcaat 14509618  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #35
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 69 - 143
Target Start/End: Original strand, 22806991 - 22807065
Alignment:
Q  69 gaatgcactacgtgagttctctatttatagagaaaattcacaactaatatgtgagaaactctaggaacaagtaat 143  Q
    |||||||||  |||||||| ||||||||||||| | || ||||||||||  ||||||||| | | ||||||||||    
T  22806991 gaatgcactgtgtgagttccctatttatagagatagtttacaactaataaatgagaaactttggaaacaagtaat 22807065  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #36
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 20 - 57
Target Start/End: Complemental strand, 13657548 - 13657511
Alignment:
Q  20 ggagaagagagaaagagttctcgacaactcaatataac 57  Q
    ||||||||||||||||||| |||| |||||||||||||    
T  13657548 ggagaagagagaaagagttatcgataactcaatataac 13657511  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #37
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 152 - 200
Target Start/End: Complemental strand, 6112156 - 6112108
Alignment:
Q  152 acttttggagtaagtaattcacatattagatctagtataaaaatatctc 200  Q
    ||||| |||| ||||||||  |||||||||||||||| |||||||||||    
T  6112156 actttgggagcaagtaattatcatattagatctagtacaaaaatatctc 6112108  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #38
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 80 - 128
Target Start/End: Original strand, 15640961 - 15641009
Alignment:
Q  80 gtgagttctctatttatagagaaaattcacaactaatatgtgagaaact 128  Q
    ||||| || ||||||||||||| ||||||||||||||| |||| |||||    
T  15640961 gtgagctcactatttatagagagaattcacaactaatacgtgataaact 15641009  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #39
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 184 - 232
Target Start/End: Original strand, 16625136 - 16625184
Alignment:
Q  184 tagtataaaaatatctcgatcgagtgccaagatatatcatattgagtac 232  Q
    ||||| ||||||||||| || |||| |||| ||||||||||||||||||    
T  16625136 tagtacaaaaatatctcaattgagtaccaaaatatatcatattgagtac 16625184  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0009 (Bit Score: 66; Significance: 3e-29; HSPs: 2)
Name: scaffold0009
Description:

Target: scaffold0009; HSP #1
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 69 - 220
Target Start/End: Original strand, 71772 - 71920
Alignment:
Q  69 gaatgcactacgtgagttctctatttatagagaaaattcacaactaatatgtgagaaactctaggaacaagtaattacatattacttttggagtaagtaa 168  Q
    |||||||||  ||||| |||||||||||||||||||||||||||||||| |||||||||| | ||||||||||||   | ||||||||   | |||||||    
T  71772 gaatgcactgtgtgagctctctatttatagagaaaattcacaactaataagtgagaaactttgggaacaagtaat---acattactttaacattaagtaa 71868  T
Q  169 ttcacatattagatctagtataaaaatatctcgatcgagtgccaagatatat 220  Q
    || ||||||||| ||||||| ||||||||||| || |||| |||| ||||||    
T  71869 tttacatattagctctagtacaaaaatatctcaattgagtaccaaaatatat 71920  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0009; HSP #2
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 6 - 53
Target Start/End: Complemental strand, 147888 - 147841
Alignment:
Q  6 aacacaagctggagggagaagagagaaagagttctcgacaactcaata 53  Q
    |||||||||| ||||| ||||||| |||||||||||||||| ||||||    
T  147888 aacacaagctagagggggaagagataaagagttctcgacaattcaata 147841  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 63; Significance: 2e-27; HSPs: 41)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 18 - 144
Target Start/End: Complemental strand, 17453098 - 17452965
Alignment:
Q  18 agggagaagagagaaagagttctcgacaactcaatataaccctt--gtgtctggaatgcactacgtgagttctctatttatagagaaaattcacaactaa 115  Q
    |||||||||||||||||||||||||||||||||||| ||| |||  |||| ||||||| |||| ||||| ||||||||||||||||||||| ||||||||    
T  17453098 agggagaagagagaaagagttctcgacaactcaataaaactctttggtgtgtggaatgtactatgtgagatctctatttatagagaaaatttacaactaa 17452999  T
Q  116 tat-----gtgagaaactctaggaacaagtaatt 144  Q
    | |     |||||||||| | |||||||||||||    
T  17452998 tctaataagtgagaaactttgggaacaagtaatt 17452965  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 72 - 152
Target Start/End: Original strand, 22845045 - 22845126
Alignment:
Q  72 tgcactacgtgagttctctatttatagagaaaattcacaactaatatgtgagaaactctaggaacaagtaatt-acatatta 152  Q
    ||||||| ||||| |||||||||||||||||||||||||||||||| |||||||||| | ||||||||||||| ||||||||    
T  22845045 tgcactatgtgagctctctatttatagagaaaattcacaactaataagtgagaaactttgggaacaagtaattcacatatta 22845126  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 69 - 152
Target Start/End: Original strand, 25375529 - 25375613
Alignment:
Q  69 gaatgcactacgtgagttctctatttatagagaaaattcacaactaatatgtgagaaactctaggaacaagtaatt-acatatta 152  Q
    |||||||||  || || |||||||||||||||||||||||||||||||| |||||||||| | ||||||||||||| ||||||||    
T  25375529 gaatgcactgtgtaagctctctatttatagagaaaattcacaactaataagtgagaaactttgggaacaagtaattcacatatta 25375613  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 90 - 226
Target Start/End: Original strand, 30635457 - 30635590
Alignment:
Q  90 tatttatagagaaaattcacaactaatatgtgagaaactctaggaacaagtaattacatattacttttggagtaagtaattcacatattagatctagtat 189  Q
    |||||||| ||||||||||||||||||| ||||||||||   ||||||||||||   | ||||| ||   | ||| ||||||||||||||| |||||||     
T  30635457 tatttataaagaaaattcacaactaataagtgagaaacttggggaacaagtaat---acattacattgacattaaataattcacatattagctctagtaa 30635553  T
Q  190 aaaaatatctcgatcgagtgccaagatatatcatatt 226  Q
    ||||||||||| || |||| |||| |||||| |||||    
T  30635554 aaaaatatctcaattgagtaccaaaatatattatatt 30635590  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 163 - 232
Target Start/End: Original strand, 22845110 - 22845179
Alignment:
Q  163 aagtaattcacatattagatctagtataaaaatatctcgatcgagtgccaagatatatcatattgagtac 232  Q
    |||||||||||||||||||||||||| ||||||||||| || |||| |||| |||||| |||||||||||    
T  22845110 aagtaattcacatattagatctagtacaaaaatatctcaattgagtaccaaaatatattatattgagtac 22845179  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 80 - 144
Target Start/End: Original strand, 6856848 - 6856912
Alignment:
Q  80 gtgagttctctatttatagagaaaattcacaactaatatgtgagaaactctaggaacaagtaatt 144  Q
    ||||| |||||||||||||||||| ||||||||||||| |||||||||| | |||||||||||||    
T  6856848 gtgagctctctatttatagagaaatttcacaactaataggtgagaaactttgggaacaagtaatt 6856912  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 69 - 143
Target Start/End: Original strand, 1284154 - 1284228
Alignment:
Q  69 gaatgcactacgtgagttctctatttatagagaaaattcacaactaatatgtgagaaactctaggaacaagtaat 143  Q
    |||||||||  |||||||||||||||||||||| |||| |||||||||| |||||||||| | | ||||||||||    
T  1284154 gaatgcactgtgtgagttctctatttatagagataatttacaactaataagtgagaaactttggaaacaagtaat 1284228  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 87 - 144
Target Start/End: Original strand, 26897285 - 26897342
Alignment:
Q  87 ctctatttatagagaaaattcacaactaatatgtgagaaactctaggaacaagtaatt 144  Q
    ||||||||||||||||| ||||||||||||| |||||||||| | |||||||||||||    
T  26897285 ctctatttatagagaaacttcacaactaataggtgagaaactttgggaacaagtaatt 26897342  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 87 - 144
Target Start/End: Original strand, 34070077 - 34070134
Alignment:
Q  87 ctctatttatagagaaaattcacaactaatatgtgagaaactctaggaacaagtaatt 144  Q
    ||||||||||||||||| ||||||||||||| |||||||||| | |||||||||||||    
T  34070077 ctctatttatagagaaacttcacaactaataggtgagaaactttgggaacaagtaatt 34070134  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 89 - 152
Target Start/End: Complemental strand, 30641545 - 30641481
Alignment:
Q  89 ctatttatagagaaaattcacaactaatatgtgagaaactctaggaacaagtaatt-acatatta 152  Q
    |||||||||||||||| || |||||||||||||||||||| | ||||||||||||| ||||||||    
T  30641545 ctatttatagagaaaaatctcaactaatatgtgagaaacttttggaacaagtaattcacatatta 30641481  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 70 - 144
Target Start/End: Complemental strand, 377743 - 377669
Alignment:
Q  70 aatgcactacgtgagttctctatttatagagaaaattcacaactaatatgtgagaaactctaggaacaagtaatt 144  Q
    |||||| || ||||| |||||||||||||| ||| ||||||||||| | |||||||||| |||| ||||||||||    
T  377743 aatgcattatgtgagctctctatttatagaaaaacttcacaactaaaaggtgagaaactttagggacaagtaatt 377669  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 62 - 128
Target Start/End: Complemental strand, 10160181 - 10160115
Alignment:
Q  62 gtgtctggaatgcactacgtgagttctctatttatagagaaaattcacaactaatatgtgagaaact 128  Q
    |||| |||||||||||  ||||| ||||||||| |||||||| ||||||||||||| ||||||||||    
T  10160181 gtgtgtggaatgcactgtgtgagctctctatttgtagagaaagttcacaactaataagtgagaaact 10160115  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 80 - 142
Target Start/End: Original strand, 17327711 - 17327773
Alignment:
Q  80 gtgagttctctatttatagagaaaattcacaactaatatgtgagaaactctaggaacaagtaa 142  Q
    ||||| ||||||||||||||||||||| |||||||||| |||||||| | | |||||||||||    
T  17327711 gtgagctctctatttatagagaaaatttacaactaataagtgagaaattttgggaacaagtaa 17327773  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 69 - 127
Target Start/End: Complemental strand, 30344370 - 30344312
Alignment:
Q  69 gaatgcactacgtgagttctctatttatagagaaaattcacaactaatatgtgagaaac 127  Q
    |||||||||  |||||||||||||||||||||| |||| |||||||||| |||||||||    
T  30344370 gaatgcactgtgtgagttctctatttatagagataatttacaactaataagtgagaaac 30344312  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 163 - 232
Target Start/End: Complemental strand, 7559736 - 7559667
Alignment:
Q  163 aagtaattcacatattagatctagtataaaaatatctcgatcgagtgccaagatatatcatattgagtac 232  Q
    ||||||||||||||| |||||||||| |||||||| || || | || |||| ||||||||||||||||||    
T  7559736 aagtaattcacatatcagatctagtacaaaaatatttcaattgtgtaccaaaatatatcatattgagtac 7559667  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 87 - 144
Target Start/End: Complemental strand, 24292898 - 24292841
Alignment:
Q  87 ctctatttatagagaaaattcacaactaatatgtgagaaactctaggaacaagtaatt 144  Q
    ||||||||||||||||| ||||||||||| | |||||||||| | |||||||||||||    
T  24292898 ctctatttatagagaaacttcacaactaaaaggtgagaaactttgggaacaagtaatt 24292841  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 67 - 128
Target Start/End: Original strand, 30658815 - 30658876
Alignment:
Q  67 tggaatgcactacgtgagttctctatttatagagaaaattcacaactaatatgtgagaaact 128  Q
    |||||||||||  ||||| ||||||||||| |||||| ||||||||||||| ||||||||||    
T  30658815 tggaatgcactgtgtgagctctctatttatggagaaagttcacaactaataagtgagaaact 30658876  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 11 - 56
Target Start/End: Complemental strand, 40847082 - 40847037
Alignment:
Q  11 aagctggagggagaagagagaaagagttctcgacaactcaatataa 56  Q
    |||||||| |||||||||||||||| ||||||||||||||||||||    
T  40847082 aagctggatggagaagagagaaagaattctcgacaactcaatataa 40847037  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 163 - 231
Target Start/End: Complemental strand, 17452972 - 17452904
Alignment:
Q  163 aagtaattcacatattagatctagtataaaaatatctcgatcgagtgccaagatatatcatattgagta 231  Q
    ||||||||||||| ||| |||||||| ||||||||||| || |||| |||| |||||| ||||||||||    
T  17452972 aagtaattcacatgttatatctagtacaaaaatatctcaattgagtaccaaaatatattatattgagta 17452904  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 152 - 200
Target Start/End: Complemental strand, 30641508 - 30641460
Alignment:
Q  152 acttttggagtaagtaattcacatattagatctagtataaaaatatctc 200  Q
    |||||||||  |||||||||||||||||||||||||| |||||||||||    
T  30641508 acttttggaacaagtaattcacatattagatctagtacaaaaatatctc 30641460  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 14 - 53
Target Start/End: Complemental strand, 19578068 - 19578029
Alignment:
Q  14 ctggagggagaagagagaaagagttctcgacaactcaata 53  Q
    ||||||||||||||||||||||||| ||||||||||||||    
T  19578068 ctggagggagaagagagaaagagttttcgacaactcaata 19578029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 163 - 241
Target Start/End: Original strand, 28855838 - 28855917
Alignment:
Q  163 aagtaattcacatattagatctagtataaaaatatctcga-tcgagtgccaagatatatcatattgagtacgaaagatat 241  Q
    ||||||||| |||||||||||||||| ||||||||||| | | ||||  ||| |||||||||||||||||| ||| ||||    
T  28855838 aagtaattctcatattagatctagtacaaaaatatctcaacttgagtatcaaaatatatcatattgagtacaaaatatat 28855917  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 101 - 144
Target Start/End: Original strand, 30629531 - 30629574
Alignment:
Q  101 aaaattcacaactaatatgtgagaaactctaggaacaagtaatt 144  Q
    |||||||||||||||||||||| ||||| |||||||||||||||    
T  30629531 aaaattcacaactaatatgtgaaaaactttaggaacaagtaatt 30629574  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 69 - 143
Target Start/End: Complemental strand, 23068207 - 23068133
Alignment:
Q  69 gaatgcactacgtgagttctctatttatagagaaaattcacaactaatatgtgagaaactctaggaacaagtaat 143  Q
    |||||||||  |||||||||||||||||||||| | || |||||||||| | |||||||| | | ||||||||||    
T  23068207 gaatgcactgtgtgagttctctatttatagagatagtttacaactaataagcgagaaactttggaaacaagtaat 23068133  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 80 - 117
Target Start/End: Complemental strand, 7559794 - 7559757
Alignment:
Q  80 gtgagttctctatttatagagaaaattcacaactaata 117  Q
    ||||| ||||||||||||||||||||||||||||||||    
T  7559794 gtgagctctctatttatagagaaaattcacaactaata 7559757  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 152 - 231
Target Start/End: Complemental strand, 10160117 - 10160036
Alignment:
Q  152 acttttggagtaagtaattcacatattagatctagta-taaaaatatctc-gatcgagtgccaagatatatcatattgagta 231  Q
    ||||| |||||||||||||| ||||||||||||||||  |||||||||||  || ||||  ||| |||||||||||||||||    
T  10160117 actttgggagtaagtaattctcatattagatctagtacaaaaaatatctcaaattgagtctcaaaatatatcatattgagta 10160036  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 87 - 144
Target Start/End: Complemental strand, 24286330 - 24286273
Alignment:
Q  87 ctctatttatagagaaaattcacaactaatatgtgagaaactctaggaacaagtaatt 144  Q
    ||||||||||||||||| ||||||||||| | ||||||| || | |||||||||||||    
T  24286330 ctctatttatagagaaacttcacaactaaaaggtgagaagctttgggaacaagtaatt 24286273  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 163 - 232
Target Start/End: Original strand, 25375597 - 25375666
Alignment:
Q  163 aagtaattcacatattagatctagtataaaaatatctcgatcgagtgccaagatatatcatattgagtac 232  Q
    |||||||||||||||||||||||||| ||| |||||||  | |||| |||| || ||| |||||||||||    
T  25375597 aagtaattcacatattagatctagtacaaatatatctcagttgagtaccaaaatctattatattgagtac 25375666  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 132 - 199
Target Start/End: Complemental strand, 19589120 - 19589052
Alignment:
Q  132 ggaacaagtaatt-acatattacttttggagtaagtaattcacatattagatctagtataaaaatatct 199  Q
    ||||||||||||| | |||||||||| | |  |||||||||||||| |||||||| |||||||||||||    
T  19589120 ggaacaagtaattcaaatattactttcgaaagaagtaattcacatactagatctaatataaaaatatct 19589052  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 88 - 119
Target Start/End: Complemental strand, 3238871 - 3238840
Alignment:
Q  88 tctatttatagagaaaattcacaactaatatg 119  Q
    ||||||||||||||||||||||||||||||||    
T  3238871 tctatttatagagaaaattcacaactaatatg 3238840  T

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Target: chr2; HSP #31
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 80 - 143
Target Start/End: Original strand, 9785799 - 9785862
Alignment:
Q  80 gtgagttctctatttatagagaaaattcacaactaatatgtgagaaactctaggaacaagtaat 143  Q
    ||||||||||||||||||| || | || |||||||||| |||||||||| | | ||||||||||    
T  9785799 gtgagttctctatttatagggatagtttacaactaataagtgagaaactttggaaacaagtaat 9785862  T

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Target: chr2; HSP #32
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 62 - 144
Target Start/End: Complemental strand, 13291025 - 13290942
Alignment:
Q  62 gtgtctggaatgcactacgtgagttctctattta-tagagaaaattcacaactaatatgtgagaaactctaggaacaagtaatt 144  Q
    |||| ||||||| |||| ||||| ||| |||| | |||||| |||||||||||||||||||||||  | | |||||||||||||    
T  13291025 gtgtatggaatgaactatgtgagctctatattaaatagagataattcacaactaatatgtgagaatttttgggaacaagtaatt 13290942  T

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Target: chr2; HSP #33
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 18 - 53
Target Start/End: Original strand, 30651525 - 30651560
Alignment:
Q  18 agggagaagagagaaagagttctcgacaactcaata 53  Q
    |||||||||||||||||||||| |||||||||||||    
T  30651525 agggagaagagagaaagagttcccgacaactcaata 30651560  T

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Target: chr2; HSP #34
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 18 - 52
Target Start/End: Complemental strand, 1934477 - 1934443
Alignment:
Q  18 agggagaagagagaaagagttctcgacaactcaat 52  Q
    |||||||||||||||||||||| ||||||||||||    
T  1934477 agggagaagagagaaagagttcccgacaactcaat 1934443  T

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Target: chr2; HSP #35
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 152 - 241
Target Start/End: Complemental strand, 6297290 - 6297200
Alignment:
Q  152 acttttggagtaagtaattcacatattagatctagtataaaaatatctc-gatcgagtgccaagatatatcatattgagtacgaaagatat 241  Q
    ||||| |||| ||| ||||| |||||||||||||||| |||| ||||||  || ||||  ||| |||||||||||||||||| ||| ||||    
T  6297290 actttgggagcaagcaattctcatattagatctagtacaaaagtatctcaaattgagtctcaaaatatatcatattgagtacaaaatatat 6297200  T

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Target: chr2; HSP #36
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 18 - 52
Target Start/End: Complemental strand, 9184901 - 9184867
Alignment:
Q  18 agggagaagagagaaagagttctcgacaactcaat 52  Q
    |||||||||||||||||||||| ||||||||||||    
T  9184901 agggagaagagagaaagagttcccgacaactcaat 9184867  T

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Target: chr2; HSP #37
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 18 - 52
Target Start/End: Original strand, 31327364 - 31327398
Alignment:
Q  18 agggagaagagagaaagagttctcgacaactcaat 52  Q
    |||||||||||||||||||||| ||||||||||||    
T  31327364 agggagaagagagaaagagttcccgacaactcaat 31327398  T

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Target: chr2; HSP #38
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 87 - 144
Target Start/End: Original strand, 42248885 - 42248942
Alignment:
Q  87 ctctatttatagagaaaattcacaactaatatgtgagaaactctaggaacaagtaatt 144  Q
    ||||||||||||||||| |||  |||||||| |||||||||| | | |||||||||||    
T  42248885 ctctatttatagagaaacttccgaactaataggtgagaaactttggaaacaagtaatt 42248942  T

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Target: chr2; HSP #39
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 101 - 156
Target Start/End: Original strand, 30619543 - 30619599
Alignment:
Q  101 aaaattcacaactaatatgtgagaaactctaggaacaagtaatt-acatattacttt 156  Q
    |||||||||||||||||||||| ||  | ||||||||||||||| | ||||||||||    
T  30619543 aaaattcacaactaatatgtgaaaatttttaggaacaagtaattcaaatattacttt 30619599  T

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Target: chr2; HSP #40
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 81 - 117
Target Start/End: Complemental strand, 38426962 - 38426927
Alignment:
Q  81 tgagttctctatttatagagaaaattcacaactaata 117  Q
    ||||||||||||||||| |||||||||||||||||||    
T  38426962 tgagttctctatttata-agaaaattcacaactaata 38426927  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 17 - 57
Target Start/End: Original strand, 38591822 - 38591862
Alignment:
Q  17 gagggagaagagagaaagagttctcgacaactcaatataac 57  Q
    |||||||||||||||||||| | |||| |||||||||||||    
T  38591822 gagggagaagagagaaagagatatcgataactcaatataac 38591862  T

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Target: chr1 (Bit Score: 54; Significance: 4e-22; HSPs: 47)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 80 - 152
Target Start/End: Original strand, 1067132 - 1067205
Alignment:
Q  80 gtgagttctctatttatagagaaaattcacaactaatatgtgagaaactctaggaacaagtaatt-acatatta 152  Q
    |||||||||||||||||||||||||||||||||||||| |||||||||| |||||||| |||||| ||||||||    
T  1067132 gtgagttctctatttatagagaaaattcacaactaataagtgagaaactttaggaacacgtaattcacatatta 1067205  T

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Target: chr1; HSP #2
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 64 - 144
Target Start/End: Original strand, 14804139 - 14804219
Alignment:
Q  64 gtctggaatgcactacgtgagttctctatttatagagaaaattcacaactaatatgtgagaaactctaggaacaagtaatt 144  Q
    |||| ||||||| | |||||| |||||||||||||||||| ||||||||||||| |||||||||| | |||||||||||||    
T  14804139 gtctagaatgcattgcgtgagctctctatttatagagaaatttcacaactaataggtgagaaactttgggaacaagtaatt 14804219  T

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Target: chr1; HSP #3
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 86 - 152
Target Start/End: Original strand, 13893973 - 13894040
Alignment:
Q  86 tctctatttatagagaaaattcacaactaatatgtgagaaactctaggaacaagtaatt-acatatta 152  Q
    |||||||||||||||||||||||||||||||| |||||||||| | ||||||||||||| ||||||||    
T  13893973 tctctatttatagagaaaattcacaactaataagtgagaaactttgggaacaagtaattcacatatta 13894040  T

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Target: chr1; HSP #4
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 62 - 144
Target Start/End: Complemental strand, 40232849 - 40232767
Alignment:
Q  62 gtgtctggaatgcactacgtgagttctctatttatagagaaaattcacaactaatatgtgagaaactctaggaacaagtaatt 144  Q
    |||| |||||||||||  ||||| |||||||||||||||||| ||||||||||||| |||||||||| | ||| |||||||||    
T  40232849 gtgtgtggaatgcactgtgtgagctctctatttatagagaaagttcacaactaataagtgagaaactttgggagcaagtaatt 40232767  T

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Target: chr1; HSP #5
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 80 - 152
Target Start/End: Complemental strand, 17213887 - 17213814
Alignment:
Q  80 gtgagttctctatttatagagaaaattcacaactaatatgtgagaaactctaggaacaagtaatt-acatatta 152  Q
    ||||| |||||||||||||||||| ||||||||||||| |||||||||| | ||||||||||||| ||||||||    
T  17213887 gtgagctctctatttatagagaaagttcacaactaataagtgagaaactttgggaacaagtaattcacatatta 17213814  T

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Target: chr1; HSP #6
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 80 - 144
Target Start/End: Original strand, 14819623 - 14819687
Alignment:
Q  80 gtgagttctctatttatagagaaaattcacaactaatatgtgagaaactctaggaacaagtaatt 144  Q
    ||||| |||||||||||||||||| ||||||||||||| |||||||||| | |||||||||||||    
T  14819623 gtgagctctctatttatagagaaatttcacaactaataggtgagaaactttgggaacaagtaatt 14819687  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 80 - 144
Target Start/End: Complemental strand, 22428639 - 22428575
Alignment:
Q  80 gtgagttctctatttatagagaaaattcacaactaatatgtgagaaactctaggaacaagtaatt 144  Q
    ||||| |||||||||||||||||| ||||||||||||| |||||||||| | |||||||||||||    
T  22428639 gtgagctctctatttatagagaaacttcacaactaataagtgagaaactttgggaacaagtaatt 22428575  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 2 - 53
Target Start/End: Original strand, 12260586 - 12260637
Alignment:
Q  2 cgttaacacaagctggagggagaagagagaaagagttctcgacaactcaata 53  Q
    ||||||||||||||| |||||||||||||||||||||||| |||||||||||    
T  12260586 cgttaacacaagctgaagggagaagagagaaagagttctcaacaactcaata 12260637  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 6 - 53
Target Start/End: Original strand, 16036218 - 16036265
Alignment:
Q  6 aacacaagctggagggagaagagagaaagagttctcgacaactcaata 53  Q
    ||||||||||||||||||||||||||||||||||||||||||| ||||    
T  16036218 aacacaagctggagggagaagagagaaagagttctcgacaacttaata 16036265  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 62 - 144
Target Start/End: Original strand, 3094722 - 3094804
Alignment:
Q  62 gtgtctggaatgcactacgtgagttctctatttatagagaaaattcacaactaatatgtgagaaactctaggaacaagtaatt 144  Q
    |||| |||||||||||  ||||  |||||||||||||||||| ||||||||||||| |||||||||| | ||| |||||||||    
T  3094722 gtgtgtggaatgcactgtgtgaactctctatttatagagaaagttcacaactaataagtgagaaactttgggagcaagtaatt 3094804  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 69 - 143
Target Start/End: Complemental strand, 39243477 - 39243403
Alignment:
Q  69 gaatgcactacgtgagttctctatttatagagaaaattcacaactaatatgtgagaaactctaggaacaagtaat 143  Q
    |||||||||  |||||||||||||||||||||| |||| |||||||||| |||||||||| | | ||||||||||    
T  39243477 gaatgcactgtgtgagttctctatttatagagataatttacaactaataagtgagaaactttggaaacaagtaat 39243403  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 69 - 143
Target Start/End: Complemental strand, 39247032 - 39246958
Alignment:
Q  69 gaatgcactacgtgagttctctatttatagagaaaattcacaactaatatgtgagaaactctaggaacaagtaat 143  Q
    |||||||||  |||||||||||||||||||||| |||| |||||||||| |||||||||| | | ||||||||||    
T  39247032 gaatgcactgtgtgagttctctatttatagagataatttacaactaataagtgagaaactttggaaacaagtaat 39246958  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 62 - 144
Target Start/End: Complemental strand, 41097419 - 41097337
Alignment:
Q  62 gtgtctggaatgcactacgtgagttctctatttatagagaaaattcacaactaatatgtgagaaactctaggaacaagtaatt 144  Q
    |||| ||||| |||||  ||||| |||||||||||||||||| ||||||||||||| |||||||||| | ||| |||||||||    
T  41097419 gtgtgtggaaagcactgtgtgagctctctatttatagagaaagttcacaactaataagtgagaaactttgggagcaagtaatt 41097337  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 69 - 143
Target Start/End: Complemental strand, 41387429 - 41387355
Alignment:
Q  69 gaatgcactacgtgagttctctatttatagagaaaattcacaactaatatgtgagaaactctaggaacaagtaat 143  Q
    |||||||||  |||||||||||||||||||||| |||| |||||||||| |||||||||| | | ||||||||||    
T  41387429 gaatgcactgtgtgagttctctatttatagagataatttacaactaataagtgagaaactttggaaacaagtaat 41387355  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 87 - 144
Target Start/End: Complemental strand, 52100658 - 52100601
Alignment:
Q  87 ctctatttatagagaaaattcacaactaatatgtgagaaactctaggaacaagtaatt 144  Q
    ||||||||||||||||| ||||||||||||| |||||||||| | |||||||||||||    
T  52100658 ctctatttatagagaaacttcacaactaataggtgagaaactttgggaacaagtaatt 52100601  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 88 - 152
Target Start/End: Complemental strand, 23285274 - 23285210
Alignment:
Q  88 tctatttatagagaaaattcacaactaatatgtgagaaactctaggaacaagtaattacatatta 152  Q
    |||||||||||||||||||||||| ||||||||||||| || | |||||||||||| | ||||||    
T  23285274 tctatttatagagaaaattcacaattaatatgtgagaacctttgggaacaagtaatcaaatatta 23285210  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 10 - 53
Target Start/End: Original strand, 20107953 - 20107996
Alignment:
Q  10 caagctggagggagaagagagaaagagttctcgacaactcaata 53  Q
    ||||||| ||||||||||||||||||||||||||||||||||||    
T  20107953 caagctgcagggagaagagagaaagagttctcgacaactcaata 20107996  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 69 - 127
Target Start/End: Complemental strand, 1924508 - 1924450
Alignment:
Q  69 gaatgcactacgtgagttctctatttatagagaaaattcacaactaatatgtgagaaac 127  Q
    |||||||||  |||||||||||||||||||||| |||| |||||||||| |||||||||    
T  1924508 gaatgcactgtgtgagttctctatttatagagataatttacaactaataagtgagaaac 1924450  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 69 - 127
Target Start/End: Complemental strand, 20923522 - 20923464
Alignment:
Q  69 gaatgcactacgtgagttctctatttatagagaaaattcacaactaatatgtgagaaac 127  Q
    |||||||||  |||||||||||||||||||||| |||| |||||||||| |||||||||    
T  20923522 gaatgcactgtgtgagttctctatttatagagataatttacaactaataagtgagaaac 20923464  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 152 - 232
Target Start/End: Original strand, 3094786 - 3094867
Alignment:
Q  152 acttttggagtaagtaattcacatattagatctagtataaaaatatctc-gatcgagtgccaagatatatcatattgagtac 232  Q
    ||||| |||| ||||||||| |||||||||||||||| |||||||||||  || ||||  ||| ||||||||||||||||||    
T  3094786 actttgggagcaagtaattctcatattagatctagtacaaaaatatctcaaattgagtctcaaaatatatcatattgagtac 3094867  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 9 - 54
Target Start/End: Original strand, 8138229 - 8138274
Alignment:
Q  9 acaagctggagggagaagagagaaagagttctcgacaactcaatat 54  Q
    |||||||| | |||||||||||||||||||||||||||||||||||    
T  8138229 acaagctgaatggagaagagagaaagagttctcgacaactcaatat 8138274  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 87 - 144
Target Start/End: Original strand, 21498309 - 21498366
Alignment:
Q  87 ctctatttatagagaaaattcacaactaatatgtgagaaactctaggaacaagtaatt 144  Q
    ||||||||||||||||| ||| ||||||||| |||||||||| | |||||||||||||    
T  21498309 ctctatttatagagaaacttcccaactaataggtgagaaactttgggaacaagtaatt 21498366  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 152 - 232
Target Start/End: Complemental strand, 19725303 - 19725223
Alignment:
Q  152 acttttggagtaagtaattcacatattagatctagtataaaaatatctcgatcgagtgccaagatatatcatattgagtac 232  Q
    ||||| |||| |||||||||| |||| |||| ||||| ||||||||||| || | || |||| ||||||||||||||||||    
T  19725303 actttgggagcaagtaattcaaatatcagatatagtacaaaaatatctcaattgtgtaccaaaatatatcatattgagtac 19725223  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 18 - 53
Target Start/End: Original strand, 7882597 - 7882632
Alignment:
Q  18 agggagaagagagaaagagttctcgacaactcaata 53  Q
    ||||||||||||||||||||||||||||||||||||    
T  7882597 agggagaagagagaaagagttctcgacaactcaata 7882632  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 91 - 126
Target Start/End: Complemental strand, 39037082 - 39037047
Alignment:
Q  91 atttatagagaaaattcacaactaatatgtgagaaa 126  Q
    ||||||||||||||||||||||||||||||||||||    
T  39037082 atttatagagaaaattcacaactaatatgtgagaaa 39037047  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 60 - 142
Target Start/End: Complemental strand, 23254650 - 23254568
Alignment:
Q  60 ttgtgtctggaatgcactacgtgagttctctatttatagagaaaattcacaactaatatgtgagaaactctaggaacaagtaa 142  Q
    |||||| | |||||||||  ||| | ||||||||||||||||||||| | || |||||||||||||| | ||| |||||||||    
T  23254650 ttgtgtgtagaatgcactttgtgtgctctctatttatagagaaaatttataattaatatgtgagaaattttagaaacaagtaa 23254568  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 163 - 232
Target Start/End: Original strand, 19727073 - 19727142
Alignment:
Q  163 aagtaattcacatattagatctagtataaaaatatctcgatcgagtgccaagatatatcatattgagtac 232  Q
    ||||||||||||||| |||||||||| ||||| ||||| || | ||  ||| ||||||||||||||||||    
T  19727073 aagtaattcacatatcagatctagtacaaaaacatctcaattgtgtttcaaaatatatcatattgagtac 19727142  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 80 - 144
Target Start/End: Original strand, 2367694 - 2367758
Alignment:
Q  80 gtgagttctctatttatagagaaaattcacaactaatatgtgagaaactctaggaacaagtaatt 144  Q
    ||||| |||||||||||||||||  || ||| |||||| |||||||||| | |||||||||||||    
T  2367694 gtgagctctctatttatagagaagctttacagctaataggtgagaaactttgggaacaagtaatt 2367758  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 163 - 231
Target Start/End: Complemental strand, 16836680 - 16836612
Alignment:
Q  163 aagtaattcacatattagatctagtataaaaatatctcgatcgagtgccaagatatatcatattgagta 231  Q
    |||||| ||||||||||||| || || ||||||||||| || |||| |||| |||||| ||||||||||    
T  16836680 aagtaactcacatattagatataatacaaaaatatctcaattgagtaccaaaatatattatattgagta 16836612  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 80 - 144
Target Start/End: Original strand, 26199009 - 26199073
Alignment:
Q  80 gtgagttctctatttatagagaaaattcacaactaatatgtgagaaactctaggaacaagtaatt 144  Q
    ||||| |||||||||||||||||| |||||| |||| | |||| ||||| | |||||||||||||    
T  26199009 gtgagctctctatttatagagaaacttcacagctaaaaggtgaaaaactttgggaacaagtaatt 26199073  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 69 - 152
Target Start/End: Complemental strand, 27308342 - 27308258
Alignment:
Q  69 gaatgcactacgtgagttctctatttatagagaaaattcacaactaatatgtgagaaactctaggaacaagtaatt-acatatta 152  Q
    ||||| |||| |||||  ||||||||||||||||||||||| ||||||||  |||||||| |  |||||| ||||| ||||||||    
T  27308342 gaatgaactatgtgagcactctatttatagagaaaattcactactaatataagagaaactttgagaacaaataattcacatatta 27308258  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 152 - 200
Target Start/End: Complemental strand, 40232785 - 40232737
Alignment:
Q  152 acttttggagtaagtaattcacatattagatctagtataaaaatatctc 200  Q
    ||||| |||| ||||||||| |||||||||||||||| |||||||||||    
T  40232785 actttgggagcaagtaattctcatattagatctagtacaaaaatatctc 40232737  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 152 - 200
Target Start/End: Complemental strand, 41097355 - 41097307
Alignment:
Q  152 acttttggagtaagtaattcacatattagatctagtataaaaatatctc 200  Q
    ||||| |||| ||||||||| |||||||||||||||| |||||||||||    
T  41097355 actttgggagcaagtaattctcatattagatctagtacaaaaatatctc 41097307  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 165 - 220
Target Start/End: Original strand, 1067191 - 1067246
Alignment:
Q  165 gtaattcacatattagatctagtataaaaatatctcgatcgagtgccaagatatat 220  Q
    ||||||||||||||||||||||||  |||||||||| || |||| |||| ||||||    
T  1067191 gtaattcacatattagatctagtaccaaaatatctcaattgagtaccaaaatatat 1067246  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 181 - 232
Target Start/End: Original strand, 26199075 - 26199126
Alignment:
Q  181 atctagtataaaaatatctcgatcgagtgccaagatatatcatattgagtac 232  Q
    |||||||| ||||||||||| || |||| |||| ||||||||||||||||||    
T  26199075 atctagtacaaaaatatctcaattgagtaccaaaatatatcatattgagtac 26199126  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 86 - 128
Target Start/End: Complemental strand, 8267289 - 8267247
Alignment:
Q  86 tctctatttatagagaaaattcacaactaatatgtgagaaact 128  Q
    |||||||||||||||||| ||||||||||||| |||| |||||    
T  8267289 tctctatttatagagaaagttcacaactaataagtgataaact 8267247  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 18 - 52
Target Start/End: Original strand, 16834086 - 16834120
Alignment:
Q  18 agggagaagagagaaagagttctcgacaactcaat 52  Q
    |||||||||||||||||||||| ||||||||||||    
T  16834086 agggagaagagagaaagagttcccgacaactcaat 16834120  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 69 - 111
Target Start/End: Complemental strand, 16836740 - 16836698
Alignment:
Q  69 gaatgcactacgtgagttctctatttatagagaaaattcacaa 111  Q
    |||||||||  ||||| ||||||||||||||||||||||||||    
T  16836740 gaatgcactgtgtgagctctctatttatagagaaaattcacaa 16836698  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 18 - 52
Target Start/End: Complemental strand, 23192310 - 23192276
Alignment:
Q  18 agggagaagagagaaagagttctcgacaactcaat 52  Q
    |||||||||||||||||||||| ||||||||||||    
T  23192310 agggagaagagagaaagagttcccgacaactcaat 23192276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 18 - 52
Target Start/End: Original strand, 25844366 - 25844400
Alignment:
Q  18 agggagaagagagaaagagttctcgacaactcaat 52  Q
    |||||||||||||||||||||| ||||||||||||    
T  25844366 agggagaagagagaaagagttcccgacaactcaat 25844400  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 18 - 52
Target Start/End: Original strand, 38621319 - 38621353
Alignment:
Q  18 agggagaagagagaaagagttctcgacaactcaat 52  Q
    |||||||||||||||||||||| ||||||||||||    
T  38621319 agggagaagagagaaagagttcccgacaactcaat 38621353  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 163 - 200
Target Start/End: Original strand, 13894024 - 13894061
Alignment:
Q  163 aagtaattcacatattagatctagtataaaaatatctc 200  Q
    |||||||||||||||||||||||||| ||||| |||||    
T  13894024 aagtaattcacatattagatctagtacaaaaacatctc 13894061  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 166 - 226
Target Start/End: Complemental strand, 27308271 - 27308210
Alignment:
Q  166 taattcacatattagatctagtataaaaatatctc-gatcgagtgccaagatatatcatatt 226  Q
    ||||||||||||||||||||||| ||||| |||||  || |||| |||| ||||||||||||    
T  27308271 taattcacatattagatctagtacaaaaacatctcaaattgagtaccaaaatatatcatatt 27308210  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 80 - 144
Target Start/End: Complemental strand, 2384689 - 2384625
Alignment:
Q  80 gtgagttctctatttatagagaaaattcacaactaatatgtgagaaactctaggaacaagtaatt 144  Q
    ||||| |||||||||||||||||  || | | |||||| |||||||||| | |||||||||||||    
T  2384689 gtgagctctctatttatagagaagctttagagctaataggtgagaaactttgggaacaagtaatt 2384625  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 163 - 199
Target Start/End: Complemental strand, 8267238 - 8267202
Alignment:
Q  163 aagtaattcacatattagatctagtataaaaatatct 199  Q
    ||||||||| |||||||||||||||| ||||||||||    
T  8267238 aagtaattctcatattagatctagtacaaaaatatct 8267202  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 20 - 52
Target Start/End: Complemental strand, 19798482 - 19798450
Alignment:
Q  20 ggagaagagagaaagagttctcgacaactcaat 52  Q
    |||||||||||||||||||| ||||||||||||    
T  19798482 ggagaagagagaaagagttcccgacaactcaat 19798450  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 20 - 52
Target Start/End: Original strand, 40166577 - 40166609
Alignment:
Q  20 ggagaagagagaaagagttctcgacaactcaat 52  Q
    |||||||||||||||||||| ||||||||||||    
T  40166577 ggagaagagagaaagagttcccgacaactcaat 40166609  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 53; Significance: 2e-21; HSPs: 48)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 22 - 221
Target Start/End: Original strand, 42972707 - 42972905
Alignment:
Q  22 agaagagagaaagagttctcgacaactcaatataacccttgtgtctg--gaatgcactacgtgagttctctatttatagagaaaattcacaactaatatg 119  Q
    |||| |||||||||||| ||||||||||| || ||| ||| ||| ||  |||||||||| ||||  | |||||||||||||||||||  | ||||| | |    
T  42972707 agaaaagagaaagagttatcgacaactcactagaactcttttgtgtgtagaatgcactatgtgaaatatctatttatagagaaaatttcccactaaaaag 42972806  T
Q  120 tgagaaactctaggaacaagtaattacatattacttttggagtaagtaattcacatattagatctagtataaaaatatctcgatcgagtgccaagatata 219  Q
    ||||||||| | |||| ||| |||   | ||||||||   | |||||||||||||||||||||| |||| ||||||||||| || |||| |||| |||||    
T  42972807 tgagaaactttgggaataagaaat---acattactttgtcattaagtaattcacatattagatcaagtacaaaaatatctcaattgagtaccaaaatata 42972903  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 62 - 144
Target Start/End: Complemental strand, 31449326 - 31449244
Alignment:
Q  62 gtgtctggaatgcactacgtgagttctctatttatagagaaaattcacaactaatatgtgagaaactctaggaacaagtaatt 144  Q
    |||| |||||||||||  ||||| |||||||||||||||||| ||||||||||||| |||||||||| | ||| |||||||||    
T  31449326 gtgtgtggaatgcactgtgtgagctctctatttatagagaaagttcacaactaataagtgagaaactttgggagcaagtaatt 31449244  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 67 - 144
Target Start/End: Complemental strand, 4237797 - 4237720
Alignment:
Q  67 tggaatgcactacgtgagttctctatttatagagaaaattcacaactaatatgtgagaaactctaggaacaagtaatt 144  Q
    |||||||||||  ||||| |||||||||||||||||| ||||||||||||| |||||||||| | ||| |||||||||    
T  4237797 tggaatgcactgtgtgagctctctatttatagagaaagttcacaactaataagtgagaaactttgggagcaagtaatt 4237720  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 67 - 144
Target Start/End: Complemental strand, 4242536 - 4242459
Alignment:
Q  67 tggaatgcactacgtgagttctctatttatagagaaaattcacaactaatatgtgagaaactctaggaacaagtaatt 144  Q
    |||||||||||  ||||| |||||||||||||||||| ||||||||||||| |||||||||| | ||| |||||||||    
T  4242536 tggaatgcactgtgtgagctctctatttatagagaaagttcacaactaataagtgagaaactttgggagcaagtaatt 4242459  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 1 - 53
Target Start/End: Original strand, 7002244 - 7002296
Alignment:
Q  1 acgttaacacaagctggagggagaagagagaaagagttctcgacaactcaata 53  Q
    ||||||||| ||||||||||||||| |||||||||||||||||||||||||||    
T  7002244 acgttaacataagctggagggagaacagagaaagagttctcgacaactcaata 7002296  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 89 - 152
Target Start/End: Original strand, 17153198 - 17153262
Alignment:
Q  89 ctatttatagagaaaattcacaactaatatgtgagaaactctaggaacaagtaatt-acatatta 152  Q
    |||||||||||||||| ||||||||||||||||||||||| | ||||||||||||| ||||||||    
T  17153198 ctatttatagagaaaaatcacaactaatatgtgagaaactttgggaacaagtaattcacatatta 17153262  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 80 - 144
Target Start/End: Complemental strand, 19393174 - 19393110
Alignment:
Q  80 gtgagttctctatttatagagaaaattcacaactaatatgtgagaaactctaggaacaagtaatt 144  Q
    ||||| |||||||||||||||||| ||||||||||||| |||||||||| | |||||||||||||    
T  19393174 gtgagatctctatttatagagaaatttcacaactaataagtgagaaactttgggaacaagtaatt 19393110  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 62 - 144
Target Start/End: Complemental strand, 8330824 - 8330742
Alignment:
Q  62 gtgtctggaatgcactacgtgagttctctatttatagagaaaattcacaactaatatgtgagaaactctaggaacaagtaatt 144  Q
    |||| ||||| |||||  ||||| |||||||||||||||||| ||||||||||||| |||||||||| | ||| |||||||||    
T  8330824 gtgtatggaaagcactgtgtgagctctctatttatagagaaagttcacaactaataagtgagaaactttgggagcaagtaatt 8330742  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 87 - 144
Target Start/End: Complemental strand, 4582732 - 4582675
Alignment:
Q  87 ctctatttatagagaaaattcacaactaatatgtgagaaactctaggaacaagtaatt 144  Q
    ||||||||||||||||| ||||||||||||| |||||||||| | |||||||||||||    
T  4582732 ctctatttatagagaaacttcacaactaataggtgagaaactttgggaacaagtaatt 4582675  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 67 - 144
Target Start/End: Complemental strand, 43302140 - 43302063
Alignment:
Q  67 tggaatgcactacgtgagttctctatttatagagaaaattcacaactaatatgtgagaaactctaggaacaagtaatt 144  Q
    |||||||||||  ||||| |||||||||||||||||| ||||||| ||||| |||||||||| | ||| |||||||||    
T  43302140 tggaatgcactgtgtgagctctctatttatagagaaagttcacaagtaataagtgagaaactttgggagcaagtaatt 43302063  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 80 - 144
Target Start/End: Complemental strand, 16066660 - 16066596
Alignment:
Q  80 gtgagttctctatttatagagaaaattcacaactaatatgtgagaaactctaggaacaagtaatt 144  Q
    ||||| |||||||||||||||||| ||||||||||||| |||||||||| | || ||||||||||    
T  16066660 gtgagctctctatttatagagaaacttcacaactaataggtgagaaactttggggacaagtaatt 16066596  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 80 - 144
Target Start/End: Original strand, 22104326 - 22104390
Alignment:
Q  80 gtgagttctctatttatagagaaaattcacaactaatatgtgagaaactctaggaacaagtaatt 144  Q
    ||||| |||||||||||||||||| |||||| |||||| |||||||||| | |||||||||||||    
T  22104326 gtgagctctctatttatagagaaacttcacagctaataggtgagaaactttgggaacaagtaatt 22104390  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 89 - 144
Target Start/End: Complemental strand, 17157486 - 17157431
Alignment:
Q  89 ctatttatagagaaaattcacaactaatatgtgagaaactctaggaacaagtaatt 144  Q
    |||||||||||||||| ||||||||||||||||||||||| | |||||| ||||||    
T  17157486 ctatttatagagaaaaatcacaactaatatgtgagaaactttgggaacacgtaatt 17157431  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 163 - 232
Target Start/End: Original strand, 10933948 - 10934018
Alignment:
Q  163 aagtaattcacatattagatctagtataaaaatatc-tcgatcgagtgccaagatatatcatattgagtac 232  Q
    |||||||||||||||||||||||||| ||||||||| |  || ||||||||| |||| |||||||||||||    
T  10933948 aagtaattcacatattagatctagtacaaaaatatcttaaattgagtgccaaaatatgtcatattgagtac 10934018  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 69 - 127
Target Start/End: Complemental strand, 18862024 - 18861966
Alignment:
Q  69 gaatgcactacgtgagttctctatttatagagaaaattcacaactaatatgtgagaaac 127  Q
    |||||||||  |||||||||||||||||||||| |||| |||||||||| |||||||||    
T  18862024 gaatgcactgtgtgagttctctatttatagagataatttacaactaataagtgagaaac 18861966  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 69 - 143
Target Start/End: Original strand, 21411663 - 21411737
Alignment:
Q  69 gaatgcactacgtgagttctctatttatagagaaaattcacaactaatatgtgagaaactctaggaacaagtaat 143  Q
    |||||||||| | |||||||||||||||||||| | || |||||||||| |||||||||| | | ||||||||||    
T  21411663 gaatgcactatgcgagttctctatttatagagatagtttacaactaataagtgagaaactttggaaacaagtaat 21411737  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 69 - 143
Target Start/End: Original strand, 21806155 - 21806229
Alignment:
Q  69 gaatgcactacgtgagttctctatttatagagaaaattcacaactaatatgtgagaaactctaggaacaagtaat 143  Q
    |||||||||| | |||||||||||||||||||| | || |||||||||| |||||||||| | | ||||||||||    
T  21806155 gaatgcactatgcgagttctctatttatagagatagtttacaactaataagtgagaaactttggaaacaagtaat 21806229  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 152 - 232
Target Start/End: Complemental strand, 4237738 - 4237657
Alignment:
Q  152 acttttggagtaagtaattcacatattagatctagtataaaaatatctc-gatcgagtgccaagatatatcatattgagtac 232  Q
    ||||| |||| ||||||||| |||||||||||||||| |||||||||||  || ||||  ||| ||||||||||||||||||    
T  4237738 actttgggagcaagtaattctcatattagatctagtacaaaaatatctcaaattgagtctcaaaatatatcatattgagtac 4237657  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 152 - 232
Target Start/End: Complemental strand, 4242477 - 4242396
Alignment:
Q  152 acttttggagtaagtaattcacatattagatctagtataaaaatatctc-gatcgagtgccaagatatatcatattgagtac 232  Q
    ||||| |||| ||||||||| |||||||||||||||| |||||||||||  || ||||  ||| ||||||||||||||||||    
T  4242477 actttgggagcaagtaattctcatattagatctagtacaaaaatatctcaaattgagtctcaaaatatatcatattgagtac 4242396  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 70 - 143
Target Start/End: Original strand, 21384385 - 21384458
Alignment:
Q  70 aatgcactacgtgagttctctatttatagagaaaattcacaactaatatgtgagaaactctaggaacaagtaat 143  Q
    ||||||||  |||||||||||||||||||||| | || |||||||||| |||||||||| | | ||||||||||    
T  21384385 aatgcactgtgtgagttctctatttatagagatagtttacaactaataagtgagaaactttggaaacaagtaat 21384458  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 70 - 143
Target Start/End: Original strand, 21387805 - 21387878
Alignment:
Q  70 aatgcactacgtgagttctctatttatagagaaaattcacaactaatatgtgagaaactctaggaacaagtaat 143  Q
    ||||||||  |||||||||||||||||||||| | || |||||||||| |||||||||| | | ||||||||||    
T  21387805 aatgcactgtgtgagttctctatttatagagatagtttacaactaataagtgagaaactttggaaacaagtaat 21387878  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 4 - 49
Target Start/End: Complemental strand, 24672824 - 24672779
Alignment:
Q  4 ttaacacaagctggagggagaagagagaaagagttctcgacaactc 49  Q
    |||||||||||| ||||||||||||||||| |||||||||||||||    
T  24672824 ttaacacaagctagagggagaagagagaaatagttctcgacaactc 24672779  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 6 - 46
Target Start/End: Original strand, 2966228 - 2966268
Alignment:
Q  6 aacacaagctggagggagaagagagaaagagttctcgacaa 46  Q
    |||||||||||||||||||||||||||||| ||||||||||    
T  2966228 aacacaagctggagggagaagagagaaagaattctcgacaa 2966268  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 80 - 144
Target Start/End: Original strand, 14036106 - 14036170
Alignment:
Q  80 gtgagttctctatttatagagaaaattcacaactaatatgtgagaaactctaggaacaagtaatt 144  Q
    ||||| |||||||||||||| ||||||||| | |||||||||||||||| | ||||| |||||||    
T  14036106 gtgagctctctatttatagaaaaaattcacgattaatatgtgagaaactttgggaacgagtaatt 14036170  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 80 - 128
Target Start/End: Original strand, 37772358 - 37772406
Alignment:
Q  80 gtgagttctctatttatagagaaaattcacaactaatatgtgagaaact 128  Q
    ||||| |||||||||||||||||| ||||||||||||| ||||||||||    
T  37772358 gtgagctctctatttatagagaaagttcacaactaataagtgagaaact 37772406  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 18 - 53
Target Start/End: Complemental strand, 17953457 - 17953422
Alignment:
Q  18 agggagaagagagaaagagttctcgacaactcaata 53  Q
    ||||||||||||||||||||||||||||||||||||    
T  17953457 agggagaagagagaaagagttctcgacaactcaata 17953422  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 69 - 127
Target Start/End: Complemental strand, 21827393 - 21827335
Alignment:
Q  69 gaatgcactacgtgagttctctatttatagagaaaattcacaactaatatgtgagaaac 127  Q
    |||||||||  ||||||||||||||||||||||  ||| |||||||||| |||||||||    
T  21827393 gaatgcactgtgtgagttctctatttatagagatcatttacaactaataagtgagaaac 21827335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 86 - 144
Target Start/End: Complemental strand, 25367423 - 25367365
Alignment:
Q  86 tctctatttatagagaaaattcacaactaatatgtgagaaactctaggaacaagtaatt 144  Q
    |||||||||||||||||| |||||||||| || |||||||||| | ||| |||||||||    
T  25367423 tctctatttatagagaaagttcacaactagtaagtgagaaactttgggatcaagtaatt 25367365  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 6 - 52
Target Start/End: Original strand, 26779714 - 26779760
Alignment:
Q  6 aacacaagctggagggagaagagagaaagagttctcgacaactcaat 52  Q
    ||||||||| ||| ||||||||||||||||||| |||||||||||||    
T  26779714 aacacaagccggatggagaagagagaaagagttatcgacaactcaat 26779760  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 86 - 144
Target Start/End: Complemental strand, 34818143 - 34818085
Alignment:
Q  86 tctctatttatagagaaaattcacaactaatatgtgagaaactctaggaacaagtaatt 144  Q
    |||||||||||||||||| |||||||||||||  ||||||||| | ||| |||||||||    
T  34818143 tctctatttatagagaaagttcacaactaataactgagaaactttcggagcaagtaatt 34818085  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 152 - 232
Target Start/End: Complemental strand, 31449262 - 31449181
Alignment:
Q  152 acttttggagtaagtaattcacatattagatctagtataaaaatatctc-gatcgagtgccaagatatatcatattgagtac 232  Q
    ||||| |||| ||||||||| |||||||||||||||| |||||||||||  || ||||  ||| ||||||||||| ||||||    
T  31449262 actttgggagcaagtaattctcatattagatctagtacaaaaatatctcaaattgagtctcaaaatatatcatatcgagtac 31449181  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 181 - 232
Target Start/End: Original strand, 22104392 - 22104443
Alignment:
Q  181 atctagtataaaaatatctcgatcgagtgccaagatatatcatattgagtac 232  Q
    |||||||| ||||||||||| || |||| |||| ||||||||||||||||||    
T  22104392 atctagtacaaaaatatctcaattgagtaccaaaatatatcatattgagtac 22104443  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 2 - 53
Target Start/End: Complemental strand, 22714494 - 22714444
Alignment:
Q  2 cgttaacacaagctggagggagaagagagaaagagttctcgacaactcaata 53  Q
    ||||||||||||||||||||| || |  ||||||||||||||||||||||||    
T  22714494 cgttaacacaagctggaggga-aataacgaaagagttctcgacaactcaata 22714444  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 6 - 53
Target Start/End: Complemental strand, 23548113 - 23548066
Alignment:
Q  6 aacacaagctggagggagaagagagaaagagttctcgacaactcaata 53  Q
    |||||||| ||||| ||||||| |||||||||||||||| ||||||||    
T  23548113 aacacaagttggagagagaagatagaaagagttctcgaccactcaata 23548066  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 163 - 241
Target Start/End: Complemental strand, 25367372 - 25367293
Alignment:
Q  163 aagtaattcacatattagatctagtataaaaatatctc-gatcgagtgccaagatatatcatattgagtacgaaagatat 241  Q
    ||||||||| |||||||||||||||| |||||||||||  || ||||  ||| |||||| ||||||||||| ||| ||||    
T  25367372 aagtaattctcatattagatctagtacaaaaatatctcaaattgagtctcaaaatatataatattgagtacaaaatatat 25367293  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 18 - 52
Target Start/End: Complemental strand, 15951036 - 15951002
Alignment:
Q  18 agggagaagagagaaagagttctcgacaactcaat 52  Q
    |||||||||||||||||||||| ||||||||||||    
T  15951036 agggagaagagagaaagagttcccgacaactcaat 15951002  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 18 - 52
Target Start/End: Original strand, 33417142 - 33417176
Alignment:
Q  18 agggagaagagagaaagagttctcgacaactcaat 52  Q
    |||||||||||||||||||||| ||||||||||||    
T  33417142 agggagaagagagaaagagttcccgacaactcaat 33417176  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 18 - 52
Target Start/End: Complemental strand, 38181726 - 38181692
Alignment:
Q  18 agggagaagagagaaagagttctcgacaactcaat 52  Q
    |||||||||||||||||||||| ||||||||||||    
T  38181726 agggagaagagagaaagagttcccgacaactcaat 38181692  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 18 - 52
Target Start/End: Complemental strand, 40125379 - 40125345
Alignment:
Q  18 agggagaagagagaaagagttctcgacaactcaat 52  Q
    |||||||||||||||||||||| ||||||||||||    
T  40125379 agggagaagagagaaagagttcccgacaactcaat 40125345  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 152 - 232
Target Start/End: Complemental strand, 43302081 - 43302002
Alignment:
Q  152 acttttggagtaagtaattcacatattagatctagtataaaaatatctc-gatcgagtgccaagatatatcatattgagtac 232  Q
    ||||| |||| ||||||||| |||||||||| ||||| |||||||||||  || ||||  ||| ||||||||||||||||||    
T  43302081 actttgggagcaagtaattctcatattagatttagtacaaaaatatctcaaattgagt--caaaatatatcatattgagtac 43302002  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 152 - 232
Target Start/End: Complemental strand, 8330760 - 8330679
Alignment:
Q  152 acttttggagtaagtaattcacatattagatctagtataaaaatatctc-gatcgagtgccaagatatatcatattgagtac 232  Q
    ||||| |||| ||||||||| |||||||||| ||||| |||||||||||  || ||||  ||| ||||||| ||||||||||    
T  8330760 actttgggagcaagtaattctcatattagatatagtacaaaaatatctcaaattgagtctcaaaatatatcttattgagtac 8330679  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #42
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 163 - 200
Target Start/End: Original strand, 17153246 - 17153283
Alignment:
Q  163 aagtaattcacatattagatctagtataaaaatatctc 200  Q
    |||||||||||||||||||| ||||| |||||||||||    
T  17153246 aagtaattcacatattagatttagtacaaaaatatctc 17153283  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #43
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 2 - 35
Target Start/End: Original strand, 28863976 - 28864009
Alignment:
Q  2 cgttaacacaagctggagggagaagagagaaaga 35  Q
    ||||||||||||||||||||| ||||||||||||    
T  28863976 cgttaacacaagctggagggacaagagagaaaga 28864009  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #44
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 152 - 232
Target Start/End: Complemental strand, 34818103 - 34818022
Alignment:
Q  152 acttttggagtaagtaattcacatattagatctagtataaaaatatctc-gatcgagtgccaagatatatcatattgagtac 232  Q
    ||||| |||| ||||||||| |||||||||||||||| ||||| |||||  || ||||  ||| ||||||| ||||||||||    
T  34818103 actttcggagcaagtaattctcatattagatctagtacaaaaacatctcaaattgagtctcaaaatatatcttattgagtac 34818022  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #45
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 93 - 152
Target Start/End: Original strand, 10933904 - 10933964
Alignment:
Q  93 ttatagagaaaattcacaactaatatgtgagaaactctaggaacaagtaatt-acatatta 152  Q
    ||||||| ||||| |||| ||||||||||||||||| | | ||||||||||| ||||||||    
T  10933904 ttatagaaaaaatccacagctaatatgtgagaaactttggtaacaagtaattcacatatta 10933964  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #46
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 86 - 122
Target Start/End: Original strand, 15197295 - 15197331
Alignment:
Q  86 tctctatttatagagaaaattcacaactaatatgtga 122  Q
    ||||||||||||| | |||||||||||||||||||||    
T  15197295 tctctatttatagtgtaaattcacaactaatatgtga 15197331  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #47
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 21 - 53
Target Start/End: Original strand, 17794090 - 17794122
Alignment:
Q  21 gagaagagagaaagagttctcgacaactcaata 53  Q
    ||||||||||||||||||||||| |||||||||    
T  17794090 gagaagagagaaagagttctcgataactcaata 17794122  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #48
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 184 - 232
Target Start/End: Complemental strand, 19393105 - 19393057
Alignment:
Q  184 tagtataaaaatatctcgatcgagtgccaagatatatcatattgagtac 232  Q
    ||||| ||||||||||| || |||| |||| ||||||||||||||||||    
T  19393105 tagtacaaaaatatctcaattgagtaccaaaatatatcatattgagtac 19393057  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0182 (Bit Score: 51; Significance: 3e-20; HSPs: 2)
Name: scaffold0182
Description:

Target: scaffold0182; HSP #1
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 62 - 144
Target Start/End: Complemental strand, 9341 - 9259
Alignment:
Q  62 gtgtctggaatgcactacgtgagttctctatttatagagaaaattcacaactaatatgtgagaaactctaggaacaagtaatt 144  Q
    |||| |||||||||||  ||||| |||||||||||||||||| ||||||||||||| |||||||||| ||||| |||||||||    
T  9341 gtgtgtggaatgcactgtgtgagctctctatttatagagaaagttcacaactaataagtgagaaactttaggagcaagtaatt 9259  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0182; HSP #2
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 152 - 200
Target Start/End: Complemental strand, 9277 - 9229
Alignment:
Q  152 acttttggagtaagtaattcacatattagatctagtataaaaatatctc 200  Q
    ||||| |||| ||||||||| |||||||||||||||| |||||||||||    
T  9277 actttaggagcaagtaattctcatattagatctagtacaaaaatatctc 9229  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0357 (Bit Score: 49; Significance: 4e-19; HSPs: 1)
Name: scaffold0357
Description:

Target: scaffold0357; HSP #1
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 80 - 144
Target Start/End: Complemental strand, 3790 - 3726
Alignment:
Q  80 gtgagttctctatttatagagaaaattcacaactaatatgtgagaaactctaggaacaagtaatt 144  Q
    ||||| |||||||||||||||||| ||||||||||||| |||||||||| |||||||||||||||    
T  3790 gtgagctctctatttatagagaaacttcacaactaataggtgagaaactttaggaacaagtaatt 3726  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0327 (Bit Score: 49; Significance: 4e-19; HSPs: 1)
Name: scaffold0327
Description:

Target: scaffold0327; HSP #1
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 80 - 144
Target Start/End: Complemental strand, 19665 - 19601
Alignment:
Q  80 gtgagttctctatttatagagaaaattcacaactaatatgtgagaaactctaggaacaagtaatt 144  Q
    ||||| |||||||||||||||||| ||||||||||||| |||||||||| |||||||||||||||    
T  19665 gtgagctctctatttatagagaaacttcacaactaataagtgagaaactttaggaacaagtaatt 19601  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 49; Significance: 4e-19; HSPs: 47)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 69 - 152
Target Start/End: Original strand, 3666553 - 3666637
Alignment:
Q  69 gaatgcactacgtgagttctctatttatagagaaaattcacaactaatatgtgagaaactctaggaacaagtaatt-acatatta 152  Q
    |||||| || |||||| |||||||||||||||||||||||||||||||| |||||||||| |  |||||||||||| ||||||||    
T  3666553 gaatgccctgcgtgagctctctatttatagagaaaattcacaactaataagtgagaaactttgagaacaagtaattcacatatta 3666637  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 62 - 144
Target Start/End: Complemental strand, 36936972 - 36936890
Alignment:
Q  62 gtgtctggaatgcactacgtgagttctctatttatagagaaaattcacaactaatatgtgagaaactctaggaacaagtaatt 144  Q
    |||| |||||||||||  ||||| |||||||||||||||||| ||||||||||||| |||||||||| | ||| |||||||||    
T  36936972 gtgtgtggaatgcactgtgtgagctctctatttatagagaaagttcacaactaataagtgagaaactttgggagcaagtaatt 36936890  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 62 - 144
Target Start/End: Complemental strand, 36941726 - 36941644
Alignment:
Q  62 gtgtctggaatgcactacgtgagttctctatttatagagaaaattcacaactaatatgtgagaaactctaggaacaagtaatt 144  Q
    |||| |||||||||||  ||||| |||||||||||||||||| ||||||||||||| |||||||||| | ||| |||||||||    
T  36941726 gtgtatggaatgcactgtgtgagctctctatttatagagaaagttcacaactaataagtgagaaactttgggagcaagtaatt 36941644  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 62 - 144
Target Start/End: Original strand, 41997297 - 41997379
Alignment:
Q  62 gtgtctggaatgcactacgtgagttctctatttatagagaaaattcacaactaatatgtgagaaactctaggaacaagtaatt 144  Q
    |||| |||||||||||  ||||| |||||||||||||||||| ||||||||||||| |||||||||| | ||| |||||||||    
T  41997297 gtgtgtggaatgcactgtgtgagctctctatttatagagaaagttcacaactaataagtgagaaactttgggagcaagtaatt 41997379  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 62 - 144
Target Start/End: Original strand, 42002066 - 42002148
Alignment:
Q  62 gtgtctggaatgcactacgtgagttctctatttatagagaaaattcacaactaatatgtgagaaactctaggaacaagtaatt 144  Q
    |||| |||||||||||  ||||| |||||||||||||||||| ||||||||||||| |||||||||| | ||| |||||||||    
T  42002066 gtgtgtggaatgcactgtgtgagctctctatttatagagaaagttcacaactaataagtgagaaactttgggagcaagtaatt 42002148  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 2 - 104
Target Start/End: Complemental strand, 1429690 - 1429584
Alignment:
Q  2 cgttaacacaagctggagggagaaga--gagaaagagttctcgacaactcaatataaccctt--gtgtctggaatgcactacgtgagttctctatttata 97  Q
    ||||||||||||||||||||||||||  ||||||||||| |||||||||| ||| ||| |||  | || | |||||||||| ||||| ||||||||||||    
T  1429690 cgttaacacaagctggagggagaagagagagaaagagttatcgacaactcgatagaactctttggcgtgtagaatgcactatgtgagctctctatttata 1429591  T
Q  98 gagaaaa 104  Q
    || ||||    
T  1429590 gaaaaaa 1429584  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 69 - 152
Target Start/End: Original strand, 36949425 - 36949509
Alignment:
Q  69 gaatgcactacgtgagttctctatttatagagaaaattcacaactaatatgtgagaaactctaggaacaagtaatt-acatatta 152  Q
    |||||||||  ||||| |||||||||||||| |||||||| |||||||| |||||||||| | ||||||||||||| ||||||||    
T  36949425 gaatgcactgtgtgagctctctatttatagaaaaaattcataactaataagtgagaaactttgggaacaagtaattcacatatta 36949509  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 2 - 57
Target Start/End: Complemental strand, 16115733 - 16115678
Alignment:
Q  2 cgttaacacaagctggagggagaagagagaaagagttctcgacaactcaatataac 57  Q
    ||||||||||||||||||||||| |||||||||||||||  |||||||||||||||    
T  16115733 cgttaacacaagctggagggagatgagagaaagagttcttaacaactcaatataac 16115678  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 62 - 128
Target Start/End: Original strand, 557329 - 557395
Alignment:
Q  62 gtgtctggaatgcactacgtgagttctctatttatagagaaaattcacaactaatatgtgagaaact 128  Q
    |||| |||||||||||  ||||| |||||||||||||||||| ||||||||||||| ||||||||||    
T  557329 gtgtgtggaatgcactgtgtgagctctctatttatagagaaagttcacaactaataagtgagaaact 557395  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 69 - 143
Target Start/End: Original strand, 10754090 - 10754164
Alignment:
Q  69 gaatgcactacgtgagttctctatttatagagaaaattcacaactaatatgtgagaaactctaggaacaagtaat 143  Q
    |||||||||  |||||||||||||||||||||| |||| |||||||||| |||||||||| | | ||||||||||    
T  10754090 gaatgcactgtgtgagttctctatttatagagataatttacaactaataagtgagaaactttggaaacaagtaat 10754164  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 62 - 144
Target Start/End: Complemental strand, 13300951 - 13300869
Alignment:
Q  62 gtgtctggaatgcactacgtgagttctctatttatagagaaaattcacaactaatatgtgagaaactctaggaacaagtaatt 144  Q
    |||| ||||| |||||  ||||| |||||||||||||||||| ||||||||||||| |||||||||| | ||| |||||||||    
T  13300951 gtgtgtggaaagcactgtgtgagctctctatttatagagaaagttcacaactaataagtgagaaactttgggagcaagtaatt 13300869  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 62 - 144
Target Start/End: Complemental strand, 23977048 - 23976966
Alignment:
Q  62 gtgtctggaatgcactacgtgagttctctatttatagagaaaattcacaactaatatgtgagaaactctaggaacaagtaatt 144  Q
    |||| |||||||||||  ||||| |||||||||||||||||| ||||| ||||||| |||||||||| | ||| |||||||||    
T  23977048 gtgtatggaatgcactgtgtgagctctctatttatagagaaagttcactactaataagtgagaaactttgggagcaagtaatt 23976966  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 62 - 144
Target Start/End: Complemental strand, 32461005 - 32460923
Alignment:
Q  62 gtgtctggaatgcactacgtgagttctctatttatagagaaaattcacaactaatatgtgagaaactctaggaacaagtaatt 144  Q
    |||| ||||||||| |  ||||| |||||||||||||| ||| ||||||||||||| |||||||||| ||||| |||||||||    
T  32461005 gtgtatggaatgcattgtgtgagctctctatttatagataaagttcacaactaataagtgagaaactttaggagcaagtaatt 32460923  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 3 - 56
Target Start/End: Complemental strand, 2859994 - 2859941
Alignment:
Q  3 gttaacacaagctggagggagaagagagaaagagttctcgacaactcaatataa 56  Q
    ||||||||||| ||||||||||||||||||| |||| |||||||||||||||||    
T  2859994 gttaacacaagttggagggagaagagagaaaaagttttcgacaactcaatataa 2859941  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 80 - 144
Target Start/End: Original strand, 21826874 - 21826938
Alignment:
Q  80 gtgagttctctatttatagagaaaattcacaactaatatgtgagaaactctaggaacaagtaatt 144  Q
    ||||| |||||||||||||||||| |||||| |||||| |||||||||| | |||||||||||||    
T  21826874 gtgagctctctatttatagagaaacttcacagctaataggtgagaaactttgggaacaagtaatt 21826938  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 80 - 144
Target Start/End: Complemental strand, 26869757 - 26869693
Alignment:
Q  80 gtgagttctctatttatagagaaaattcacaactaatatgtgagaaactctaggaacaagtaatt 144  Q
    ||||| |||||||||||||||||| |||||| |||||| |||||||||| | |||||||||||||    
T  26869757 gtgagctctctatttatagagaaacttcacagctaataggtgagaaactttgggaacaagtaatt 26869693  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 80 - 144
Target Start/End: Original strand, 31732188 - 31732252
Alignment:
Q  80 gtgagttctctatttatagagaaaattcacaactaatatgtgagaaactctaggaacaagtaatt 144  Q
    ||||| |||||||||||||||||| ||||||||||||| |||||||||| | ||| |||||||||    
T  31732188 gtgagctctctatttatagagaaagttcacaactaataagtgagaaactttgggagcaagtaatt 31732252  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 62 - 128
Target Start/End: Original strand, 562101 - 562167
Alignment:
Q  62 gtgtctggaatgcactacgtgagttctctatttatagagaaaattcacaactaatatgtgagaaact 128  Q
    |||| |||||||||||  ||||| |||||||||||||||||| ||||||||||||| || |||||||    
T  562101 gtgtgtggaatgcactgtgtgagctctctatttatagagaaagttcacaactaataagtaagaaact 562167  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 152 - 232
Target Start/End: Complemental strand, 36936908 - 36936827
Alignment:
Q  152 acttttggagtaagtaattcacatattagatctagtataaaaatatctc-gatcgagtgccaagatatatcatattgagtac 232  Q
    ||||| |||| ||||||||| |||||||||||||||| |||||||||||  || ||||  ||| ||||||||||||||||||    
T  36936908 actttgggagcaagtaattctcatattagatctagtacaaaaatatctcaaattgagtctcaaaatatatcatattgagtac 36936827  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 152 - 232
Target Start/End: Complemental strand, 36941662 - 36941581
Alignment:
Q  152 acttttggagtaagtaattcacatattagatctagtataaaaatatctc-gatcgagtgccaagatatatcatattgagtac 232  Q
    ||||| |||| ||||||||| |||||||||||||||| |||||||||||  || ||||  ||| ||||||||||||||||||    
T  36941662 actttgggagcaagtaattctcatattagatctagtacaaaaatatctcaaattgagtctcaaaatatatcatattgagtac 36941581  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 163 - 232
Target Start/End: Original strand, 36949493 - 36949562
Alignment:
Q  163 aagtaattcacatattagatctagtataaaaatatctcgatcgagtgccaagatatatcatattgagtac 232  Q
    |||||||||||||||||||||||||| ||||||||||  || |||| |||| ||||||  ||||||||||    
T  36949493 aagtaattcacatattagatctagtacaaaaatatcttaattgagtaccaaaatatattttattgagtac 36949562  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 80 - 128
Target Start/End: Complemental strand, 15395283 - 15395235
Alignment:
Q  80 gtgagttctctatttatagagaaaattcacaactaatatgtgagaaact 128  Q
    ||||| |||||||||||||||||||||||||||||||| ||||| ||||    
T  15395283 gtgagctctctatttatagagaaaattcacaactaataagtgagtaact 15395235  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 80 - 128
Target Start/End: Complemental strand, 21323419 - 21323371
Alignment:
Q  80 gtgagttctctatttatagagaaaattcacaactaatatgtgagaaact 128  Q
    ||||| |||||||||||||||||| ||||||||||||| ||||||||||    
T  21323419 gtgagctctctatttatagagaaagttcacaactaataagtgagaaact 21323371  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 3 - 50
Target Start/End: Complemental strand, 2848151 - 2848104
Alignment:
Q  3 gttaacacaagctggagggagaagagagaaagagttctcgacaactca 50  Q
    ||||||||||| ||||||||||||||||||| |||| |||||||||||    
T  2848151 gttaacacaagttggagggagaagagagaaaaagttttcgacaactca 2848104  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 3 - 53
Target Start/End: Complemental strand, 15414394 - 15414346
Alignment:
Q  3 gttaacacaagctggagggagaagagagaaagagttctcgacaactcaata 53  Q
    ||||||||||||||||||||||||||||  |||||||||||||||| ||||    
T  15414394 gttaacacaagctggagggagaagagag--agagttctcgacaactgaata 15414346  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 6 - 53
Target Start/End: Complemental strand, 23757311 - 23757264
Alignment:
Q  6 aacacaagctggagggagaagagagaaagagttctcgacaactcaata 53  Q
    |||| ||||| ||||||||||||| |||||||||||||||||||||||    
T  23757311 aacataagctagagggagaagagaaaaagagttctcgacaactcaata 23757264  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 6 - 53
Target Start/End: Complemental strand, 23822767 - 23822720
Alignment:
Q  6 aacacaagctggagggagaagagagaaagagttctcgacaactcaata 53  Q
    |||| ||||| ||||||||||||| |||||||||||||||||||||||    
T  23822767 aacataagctagagggagaagagaaaaagagttctcgacaactcaata 23822720  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 152 - 229
Target Start/End: Complemental strand, 32460941 - 32460863
Alignment:
Q  152 acttttggagtaagtaattcacatattagatctagtataaaaatatctc-gatcgagtgccaagatatatcatattgag 229  Q
    ||||| |||| ||||||||| |||||||||||||||| |||||||||||  || ||||  ||| |||||||||||||||    
T  32460941 actttaggagcaagtaattctcatattagatctagtacaaaaatatctcaaattgagtctcaaaatatatcatattgag 32460863  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 80 - 117
Target Start/End: Original strand, 8770894 - 8770931
Alignment:
Q  80 gtgagttctctatttatagagaaaattcacaactaata 117  Q
    ||||| ||||||||||||||||||||||||||||||||    
T  8770894 gtgagctctctatttatagagaaaattcacaactaata 8770931  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 87 - 144
Target Start/End: Original strand, 41099188 - 41099245
Alignment:
Q  87 ctctatttatagagaaaattcacaactaatatgtgagaaactctaggaacaagtaatt 144  Q
    ||||||||||||||||| ||| ||||||||| |||| ||||| | |||||||||||||    
T  41099188 ctctatttatagagaaacttcccaactaataggtgataaactttgggaacaagtaatt 41099245  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 152 - 232
Target Start/End: Original strand, 41997361 - 41997442
Alignment:
Q  152 acttttggagtaagtaattcacatattagatctagtataaaaatatctc-gatcgagtgccaagatatatcatattgagtac 232  Q
    ||||| |||| ||||||||| ||||||||||||| || |||||||||||  || ||||  ||| ||||||||||||||||||    
T  41997361 actttgggagcaagtaattctcatattagatctaatacaaaaatatctcaaattgagtctcaaaatatatcatattgagtac 41997442  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 152 - 232
Target Start/End: Original strand, 42002130 - 42002211
Alignment:
Q  152 acttttggagtaagtaattcacatattagatctagtataaaaatatctc-gatcgagtgccaagatatatcatattgagtac 232  Q
    ||||| |||| ||||||||| ||||||||||||| || |||||||||||  || ||||  ||| ||||||||||||||||||    
T  42002130 actttgggagcaagtaattctcatattagatctaatacaaaaatatctcaaattgagtctcaaaatatatcatattgagtac 42002211  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 80 - 144
Target Start/End: Complemental strand, 12044573 - 12044509
Alignment:
Q  80 gtgagttctctatttatagagaaaattcacaactaatatgtgagaaactctaggaacaagtaatt 144  Q
    ||||| ||||| ||| |||||||||||||||||||||| |||| ||||| | ||| |||||||||    
T  12044573 gtgagctctctttttctagagaaaattcacaactaataagtgaaaaactttgggagcaagtaatt 12044509  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 152 - 200
Target Start/End: Original strand, 31732234 - 31732282
Alignment:
Q  152 acttttggagtaagtaattcacatattagatctagtataaaaatatctc 200  Q
    ||||| |||| ||||||||| |||||||||||||||| |||||||||||    
T  31732234 actttgggagcaagtaattctcatattagatctagtacaaaaatatctc 31732282  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 181 - 232
Target Start/End: Original strand, 21826940 - 21826991
Alignment:
Q  181 atctagtataaaaatatctcgatcgagtgccaagatatatcatattgagtac 232  Q
    |||||||| ||||||||||| || |||| |||| ||||||||||||||||||    
T  21826940 atctagtacaaaaatatctcaattgagtaccaaaatatatcatattgagtac 21826991  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 152 - 199
Target Start/End: Complemental strand, 23976984 - 23976937
Alignment:
Q  152 acttttggagtaagtaattcacatattagatctagtataaaaatatct 199  Q
    ||||| |||| ||||||||| |||||||||||||||| ||||||||||    
T  23976984 actttgggagcaagtaattctcatattagatctagtacaaaaatatct 23976937  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 181 - 232
Target Start/End: Complemental strand, 26869691 - 26869640
Alignment:
Q  181 atctagtataaaaatatctcgatcgagtgccaagatatatcatattgagtac 232  Q
    |||||||| ||||||||||| || |||| |||| ||||||||||||||||||    
T  26869691 atctagtacaaaaatatctcaattgagtaccaaaatatatcatattgagtac 26869640  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 75 - 110
Target Start/End: Original strand, 27425136 - 27425171
Alignment:
Q  75 actacgtgagttctctatttatagagaaaattcaca 110  Q
    ||||||||||||||||||||| ||||||||||||||    
T  27425136 actacgtgagttctctatttaaagagaaaattcaca 27425171  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 18 - 53
Target Start/End: Original strand, 39519006 - 39519041
Alignment:
Q  18 agggagaagagagaaagagttctcgacaactcaata 53  Q
    |||||||||||||||||||||| |||||||||||||    
T  39519006 agggagaagagagaaagagttcccgacaactcaata 39519041  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 163 - 197
Target Start/End: Original strand, 3666621 - 3666655
Alignment:
Q  163 aagtaattcacatattagatctagtataaaaatat 197  Q
    |||||||||||||||||||||||||| ||||||||    
T  3666621 aagtaattcacatattagatctagtacaaaaatat 3666655  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #41
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 18 - 52
Target Start/End: Original strand, 4872512 - 4872546
Alignment:
Q  18 agggagaagagagaaagagttctcgacaactcaat 52  Q
    |||||||||||||||||||||| ||||||||||||    
T  4872512 agggagaagagagaaagagttcccgacaactcaat 4872546  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #42
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 163 - 229
Target Start/End: Complemental strand, 24435569 - 24435503
Alignment:
Q  163 aagtaattcacatattagatctagtataaaaatatctcgatcgagtgccaagatatatcatattgag 229  Q
    |||||| ||| ||||||||||||||| ||||||||||| || |||| |||| |||| | ||||||||    
T  24435569 aagtaactcatatattagatctagtacaaaaatatctcaattgagtaccaaaatatgttatattgag 24435503  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #43
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 168 - 232
Target Start/End: Original strand, 557408 - 557473
Alignment:
Q  168 attcacatattagatctagtataaaaatatctc-gatcgagtgccaagatatatcatattgagtac 232  Q
    |||| |||||||||||||||| |||||||||||  || ||||  ||| ||||||||||||||||||    
T  557408 attctcatattagatctagtacaaaaatatctcaaattgagtctcaaaatatatcatattgagtac 557473  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #44
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 168 - 232
Target Start/End: Original strand, 562180 - 562245
Alignment:
Q  168 attcacatattagatctagtataaaaatatctc-gatcgagtgccaagatatatcatattgagtac 232  Q
    |||| |||||||||||||||| |||||||||||  || ||||  ||| ||||||||||||||||||    
T  562180 attctcatattagatctagtacaaaaatatctcaaattgagtctcaaaatatatcatattgagtac 562245  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #45
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 163 - 228
Target Start/End: Complemental strand, 1429561 - 1429496
Alignment:
Q  163 aagtaattcacatattagatctagtataaaaatatctcgatcgagtgccaagatatatcatattga 228  Q
    ||||||| ||||| |||||||| ||| ||||||||||| || |||| |||| |||||| |||||||    
T  1429561 aagtaatacacatgttagatctggtacaaaaatatctcaattgagtaccaaaatatattatattga 1429496  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #46
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 163 - 232
Target Start/End: Original strand, 8770952 - 8771021
Alignment:
Q  163 aagtaattcacatattagatctagtataaaaatatctcgatcgagtgccaagatatatcatattgagtac 232  Q
    ||||||||||||||| |||||||||| |||||||| || || | || | || |||||||||||| |||||    
T  8770952 aagtaattcacatatcagatctagtacaaaaatatttcaattgtgtacaaaaatatatcatattaagtac 8771021  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #47
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 69 - 142
Target Start/End: Complemental strand, 24435637 - 24435564
Alignment:
Q  69 gaatgcactacgtgagttctctatttatagagaaaattcacaactaatatgtgagaaactctaggaacaagtaa 142  Q
    |||||||||  | ||| |||||||||||||||||| ||| | ||||||| |||| | ||| |||||||||||||    
T  24435637 gaatgcactgtgagagctctctatttatagagaaagttctctactaataagtgaaagactttaggaacaagtaa 24435564  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0132 (Bit Score: 45; Significance: 1e-16; HSPs: 2)
Name: scaffold0132
Description:

Target: scaffold0132; HSP #1
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 80 - 144
Target Start/End: Complemental strand, 24739 - 24675
Alignment:
Q  80 gtgagttctctatttatagagaaaattcacaactaatatgtgagaaactctaggaacaagtaatt 144  Q
    ||||| |||||||||||||||||| ||||||||||||| |||||||||| | |||||||||||||    
T  24739 gtgagctctctatttatagagaaatttcacaactaataagtgagaaactttgggaacaagtaatt 24675  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0132; HSP #2
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 184 - 232
Target Start/End: Complemental strand, 24670 - 24622
Alignment:
Q  184 tagtataaaaatatctcgatcgagtgccaagatatatcatattgagtac 232  Q
    ||||| ||||||||||| || |||| |||| ||||||||||||||||||    
T  24670 tagtacaaaaatatctcaattgagtaccaaaatatatcatattgagtac 24622  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0061 (Bit Score: 45; Significance: 1e-16; HSPs: 2)
Name: scaffold0061
Description:

Target: scaffold0061; HSP #1
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 80 - 144
Target Start/End: Complemental strand, 49427 - 49363
Alignment:
Q  80 gtgagttctctatttatagagaaaattcacaactaatatgtgagaaactctaggaacaagtaatt 144  Q
    |||||||||||||||||||||||| ||||||||||||| |||||||||| | ||| |||||||||    
T  49427 gtgagttctctatttatagagaaagttcacaactaataagtgagaaactttgggagcaagtaatt 49363  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0061; HSP #2
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 152 - 200
Target Start/End: Complemental strand, 49381 - 49333
Alignment:
Q  152 acttttggagtaagtaattcacatattagatctagtataaaaatatctc 200  Q
    ||||| |||| ||||||||| ||||||| |||||||| |||||||||||    
T  49381 actttgggagcaagtaattctcatattaaatctagtacaaaaatatctc 49333  T

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Target: scaffold0019 (Bit Score: 45; Significance: 1e-16; HSPs: 1)
Name: scaffold0019
Description:

Target: scaffold0019; HSP #1
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 80 - 144
Target Start/End: Original strand, 30335 - 30399
Alignment:
Q  80 gtgagttctctatttatagagaaaattcacaactaatatgtgagaaactctaggaacaagtaatt 144  Q
    ||||| |||||||||||||||||| ||||||||||||| |||||||||| | |||||||||||||    
T  30335 gtgagctctctatttatagagaaatttcacaactaataggtgagaaactttgggaacaagtaatt 30399  T

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Target: scaffold0017 (Bit Score: 45; Significance: 1e-16; HSPs: 2)
Name: scaffold0017
Description:

Target: scaffold0017; HSP #1
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 80 - 144
Target Start/End: Original strand, 149207 - 149271
Alignment:
Q  80 gtgagttctctatttatagagaaaattcacaactaatatgtgagaaactctaggaacaagtaatt 144  Q
    |||||||||||||||||||||||| ||||||||||||| |||||||||| | ||| |||||||||    
T  149207 gtgagttctctatttatagagaaagttcacaactaataagtgagaaactttgggagcaagtaatt 149271  T

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Target: scaffold0017; HSP #2
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 152 - 200
Target Start/End: Original strand, 149253 - 149301
Alignment:
Q  152 acttttggagtaagtaattcacatattagatctagtataaaaatatctc 200  Q
    ||||| |||| ||||||||| ||||||| |||||||| |||||||||||    
T  149253 actttgggagcaagtaattctcatattaaatctagtacaaaaatatctc 149301  T

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Target: scaffold0572 (Bit Score: 43; Significance: 0.000000000000002; HSPs: 1)
Name: scaffold0572
Description:

Target: scaffold0572; HSP #1
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 69 - 143
Target Start/End: Complemental strand, 10430 - 10356
Alignment:
Q  69 gaatgcactacgtgagttctctatttatagagaaaattcacaactaatatgtgagaaactctaggaacaagtaat 143  Q
    |||||||||  |||||||||||||||||||||| |||| |||||||||| |||||||||| | | ||||||||||    
T  10430 gaatgcactgtgtgagttctctatttatagagataatttacaactaataagtgagaaactttggaaacaagtaat 10356  T

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Target: scaffold0229 (Bit Score: 43; Significance: 0.000000000000002; HSPs: 1)
Name: scaffold0229
Description:

Target: scaffold0229; HSP #1
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 69 - 143
Target Start/End: Complemental strand, 10880 - 10806
Alignment:
Q  69 gaatgcactacgtgagttctctatttatagagaaaattcacaactaatatgtgagaaactctaggaacaagtaat 143  Q
    |||||||||  |||||||||||||||||||||| |||| |||||||||| |||||||||| | | ||||||||||    
T  10880 gaatgcactgtgtgagttctctatttatagagataatttacaactaataagtgagaaactttggaaacaagtaat 10806  T

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Target: scaffold0205 (Bit Score: 43; Significance: 0.000000000000002; HSPs: 1)
Name: scaffold0205
Description:

Target: scaffold0205; HSP #1
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 62 - 144
Target Start/End: Original strand, 30900 - 30982
Alignment:
Q  62 gtgtctggaatgcactacgtgagttctctatttatagagaaaattcacaactaatatgtgagaaactctaggaacaagtaatt 144  Q
    |||||| ||||||| |  ||||| |||||||||||||||||| ||||||||||||| |||||||||| | | |||||||||||    
T  30900 gtgtcttgaatgcattgtgtgagctctctatttatagagaaatttcacaactaataagtgagaaactttggaaacaagtaatt 30982  T

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Target: scaffold0157 (Bit Score: 43; Significance: 0.000000000000002; HSPs: 1)
Name: scaffold0157
Description:

Target: scaffold0157; HSP #1
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 69 - 143
Target Start/End: Complemental strand, 32039 - 31965
Alignment:
Q  69 gaatgcactacgtgagttctctatttatagagaaaattcacaactaatatgtgagaaactctaggaacaagtaat 143  Q
    |||||||||  |||||||||||||||||||||| |||| |||||||||| |||||||||| | | ||||||||||    
T  32039 gaatgcactgtgtgagttctctatttatagagataatttacaactaataagtgagaaactttggaaacaagtaat 31965  T

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Target: scaffold0144 (Bit Score: 43; Significance: 0.000000000000002; HSPs: 1)
Name: scaffold0144
Description:

Target: scaffold0144; HSP #1
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 69 - 143
Target Start/End: Original strand, 7517 - 7591
Alignment:
Q  69 gaatgcactacgtgagttctctatttatagagaaaattcacaactaatatgtgagaaactctaggaacaagtaat 143  Q
    |||||||||  |||||||||||||||||||||| |||| |||||||||| |||||||||| | | ||||||||||    
T  7517 gaatgcactgtgtgagttctctatttatagagataatttacaactaataagtgagaaactttggaaacaagtaat 7591  T

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Target: scaffold0141 (Bit Score: 43; Significance: 0.000000000000002; HSPs: 1)
Name: scaffold0141
Description:

Target: scaffold0141; HSP #1
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 69 - 143
Target Start/End: Complemental strand, 13466 - 13392
Alignment:
Q  69 gaatgcactacgtgagttctctatttatagagaaaattcacaactaatatgtgagaaactctaggaacaagtaat 143  Q
    |||||||||  |||||||||||||||||||||| |||| |||||||||| |||||||||| | | ||||||||||    
T  13466 gaatgcactgtgtgagttctctatttatagagataatttacaactaataagtgagaaactttggaaacaagtaat 13392  T

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Target: scaffold0124 (Bit Score: 43; Significance: 0.000000000000002; HSPs: 1)
Name: scaffold0124
Description:

Target: scaffold0124; HSP #1
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 69 - 143
Target Start/End: Complemental strand, 21440 - 21366
Alignment:
Q  69 gaatgcactacgtgagttctctatttatagagaaaattcacaactaatatgtgagaaactctaggaacaagtaat 143  Q
    |||||||||  |||||||||||||||||||||| |||| |||||||||| |||||||||| | | ||||||||||    
T  21440 gaatgcactgtgtgagttctctatttatagagataatttacaactaataagtgagaaactttggaaacaagtaat 21366  T

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Target: scaffold0070 (Bit Score: 43; Significance: 0.000000000000002; HSPs: 4)
Name: scaffold0070
Description:

Target: scaffold0070; HSP #1
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 62 - 144
Target Start/End: Original strand, 59059 - 59141
Alignment:
Q  62 gtgtctggaatgcactacgtgagttctctatttatagagaaaattcacaactaatatgtgagaaactctaggaacaagtaatt 144  Q
    |||| ||||| ||| || ||||| |||||||||||||||||| ||||||||||||| |||||||||| | ||| |||||||||    
T  59059 gtgtatggaaagcattatgtgagctctctatttatagagaaagttcacaactaataagtgagaaactttgggatcaagtaatt 59141  T

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Target: scaffold0070; HSP #2
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 86 - 144
Target Start/End: Original strand, 63285 - 63343
Alignment:
Q  86 tctctatttatagagaaaattcacaactaatatgtgagaaactctaggaacaagtaatt 144  Q
    |||||||||||||||||| ||||||||||||| |||||||||| | ||| |||||||||    
T  63285 tctctatttatagagaaagttcacaactaataagtgagaaactttgggatcaagtaatt 63343  T

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Target: scaffold0070; HSP #3
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 163 - 241
Target Start/End: Original strand, 59134 - 59213
Alignment:
Q  163 aagtaattcacatattagatctagtataaaaatatctc-gatcgagtgccaagatatatcatattgagtacgaaagatat 241  Q
    ||||||||| |||||||||||||||| |||||||||||  || ||||  ||| |||||||||||||||||| ||| ||||    
T  59134 aagtaattctcatattagatctagtacaaaaatatctcaaattgagtctcaaaatatatcatattgagtacaaaatatat 59213  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0070; HSP #4
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 163 - 241
Target Start/End: Original strand, 63336 - 63415
Alignment:
Q  163 aagtaattcacatattagatctagtataaaaatatctc-gatcgagtgccaagatatatcatattgagtacgaaagatat 241  Q
    ||||||||| |||||||||||||||| |||||||||||  || ||||  ||| |||||||||||||||||| ||| ||||    
T  63336 aagtaattctcatattagatctagtacaaaaatatctcaaattgagtctcaaaatatatcatattgagtacaaaatatat 63415  T

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Target: scaffold0034 (Bit Score: 43; Significance: 0.000000000000002; HSPs: 1)
Name: scaffold0034
Description:

Target: scaffold0034; HSP #1
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 69 - 143
Target Start/End: Original strand, 121206 - 121280
Alignment:
Q  69 gaatgcactacgtgagttctctatttatagagaaaattcacaactaatatgtgagaaactctaggaacaagtaat 143  Q
    |||||||||  |||||||||||||||||||||| |||| |||||||||| |||||||||| | | ||||||||||    
T  121206 gaatgcactgtgtgagttctctatttatagagataatttacaactaataagtgagaaactttggaaacaagtaat 121280  T

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Target: scaffold0015 (Bit Score: 42; Significance: 0.000000000000006; HSPs: 2)
Name: scaffold0015
Description:

Target: scaffold0015; HSP #1
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 87 - 144
Target Start/End: Complemental strand, 193703 - 193646
Alignment:
Q  87 ctctatttatagagaaaattcacaactaatatgtgagaaactctaggaacaagtaatt 144  Q
    ||||||||||||||||| ||||||||||||| |||||||||| | |||||||||||||    
T  193703 ctctatttatagagaaacttcacaactaataggtgagaaactttgggaacaagtaatt 193646  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0015; HSP #2
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 90 - 144
Target Start/End: Complemental strand, 188014 - 187961
Alignment:
Q  90 tatttatagagaaaattcacaactaatatgtgagaaactctaggaacaagtaatt 144  Q
    |||||||||||||| ||||||||| ||| |||||||||| | |||||||||||||    
T  188014 tatttatagagaaacttcacaactgataggtgagaaact-ttggaacaagtaatt 187961  T

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Target: scaffold1910 (Bit Score: 41; Significance: 0.00000000000002; HSPs: 1)
Name: scaffold1910
Description:

Target: scaffold1910; HSP #1
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 80 - 144
Target Start/End: Original strand, 517 - 581
Alignment:
Q  80 gtgagttctctatttatagagaaaattcacaactaatatgtgagaaactctaggaacaagtaatt 144  Q
    ||||| |||||||||||||||||| ||||||||||||| |||||||||| | || ||||||||||    
T  517 gtgagctctctatttatagagaaacttcacaactaataggtgagaaactttggggacaagtaatt 581  T

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Target: scaffold0932 (Bit Score: 41; Significance: 0.00000000000002; HSPs: 1)
Name: scaffold0932
Description:

Target: scaffold0932; HSP #1
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 62 - 142
Target Start/End: Complemental strand, 1100 - 1020
Alignment:
Q  62 gtgtctggaatgcactacgtgagttctctatttatagagaaaattcacaactaatatgtgagaaactctaggaacaagtaa 142  Q
    |||| ||||||| |||||||||  |  |||||||||||||||| ||| ||||||||||||||||||| | |||||||||||    
T  1100 gtgtgtggaatgaactacgtgatctacctatttatagagaaaaatcataactaatatgtgagaaactttgggaacaagtaa 1020  T

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Target: scaffold0720 (Bit Score: 41; Significance: 0.00000000000002; HSPs: 2)
Name: scaffold0720
Description:

Target: scaffold0720; HSP #1
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 89 - 152
Target Start/End: Complemental strand, 5985 - 5921
Alignment:
Q  89 ctatttatagagaaaattcacaactaatatgtgagaaactctaggaacaagtaatt-acatatta 152  Q
    ||||||||||||||||  |||||||||||||||||||||| | ||||||||||||| ||||||||    
T  5985 ctatttatagagaaaaagcacaactaatatgtgagaaactttcggaacaagtaattcacatatta 5921  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0720; HSP #2
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 163 - 200
Target Start/End: Complemental strand, 5937 - 5900
Alignment:
Q  163 aagtaattcacatattagatctagtataaaaatatctc 200  Q
    |||||||||||||||||||||||||| |||||||||||    
T  5937 aagtaattcacatattagatctagtacaaaaatatctc 5900  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0478 (Bit Score: 41; Significance: 0.00000000000002; HSPs: 3)
Name: scaffold0478
Description:

Target: scaffold0478; HSP #1
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 89 - 152
Target Start/End: Original strand, 8247 - 8311
Alignment:
Q  89 ctatttatagagaaaattcacaactaatatgtgagaaactctaggaacaagtaatt-acatatta 152  Q
    |||||||||||||||| ||| ||||||||||||||||||| | ||||||||||||| ||||||||    
T  8247 ctatttatagagaaaaatcataactaatatgtgagaaactttgggaacaagtaattcacatatta 8311  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0478; HSP #2
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 163 - 200
Target Start/End: Original strand, 8295 - 8332
Alignment:
Q  163 aagtaattcacatattagatctagtataaaaatatctc 200  Q
    |||||||||||||||||||||||||| |||||||||||    
T  8295 aagtaattcacatattagatctagtacaaaaatatctc 8332  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0478; HSP #3
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 163 - 197
Target Start/End: Original strand, 2917 - 2951
Alignment:
Q  163 aagtaattcacatattagatctagtataaaaatat 197  Q
    |||||||||||||||||||||||||| ||||||||    
T  2917 aagtaattcacatattagatctagtacaaaaatat 2951  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0060 (Bit Score: 41; Significance: 0.00000000000002; HSPs: 4)
Name: scaffold0060
Description:

Target: scaffold0060; HSP #1
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 80 - 144
Target Start/End: Complemental strand, 47416 - 47352
Alignment:
Q  80 gtgagttctctatttatagagaaaattcacaactaatatgtgagaaactctaggaacaagtaatt 144  Q
    ||||| |||||||||||||||||| ||||||||||||| |||||||||| | ||| |||||||||    
T  47416 gtgagctctctatttatagagaaagttcacaactaataagtgagaaactttgggagcaagtaatt 47352  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0060; HSP #2
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 80 - 144
Target Start/End: Complemental strand, 52360 - 52296
Alignment:
Q  80 gtgagttctctatttatagagaaaattcacaactaatatgtgagaaactctaggaacaagtaatt 144  Q
    ||||| |||||||||||||||||| ||||||||||||| |||||||||| | ||| |||||||||    
T  52360 gtgagctctctatttatagagaaagttcacaactaataagtgagaaactttgggagcaagtaatt 52296  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0060; HSP #3
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 152 - 200
Target Start/End: Complemental strand, 47370 - 47322
Alignment:
Q  152 acttttggagtaagtaattcacatattagatctagtataaaaatatctc 200  Q
    ||||| |||| ||||||||| |||||||||||||||| |||||||||||    
T  47370 actttgggagcaagtaattctcatattagatctagtacaaaaatatctc 47322  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0060; HSP #4
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 152 - 200
Target Start/End: Complemental strand, 52314 - 52266
Alignment:
Q  152 acttttggagtaagtaattcacatattagatctagtataaaaatatctc 200  Q
    ||||| |||| ||||||||| |||||||||||||||| |||||||||||    
T  52314 actttgggagcaagtaattctcatattagatctagtacaaaaatatctc 52266  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0452 (Bit Score: 39; Significance: 0.0000000000004; HSPs: 1)
Name: scaffold0452
Description:

Target: scaffold0452; HSP #1
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 69 - 143
Target Start/End: Complemental strand, 12422 - 12348
Alignment:
Q  69 gaatgcactacgtgagttctctatttatagagaaaattcacaactaatatgtgagaaactctaggaacaagtaat 143  Q
    |||||||||  |||||||||||||||||||||| | || |||||||||| |||||||||| | | ||||||||||    
T  12422 gaatgcactgtgtgagttctctatttatagagatagtttacaactaataagtgagaaactttggaaacaagtaat 12348  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0431 (Bit Score: 39; Significance: 0.0000000000004; HSPs: 1)
Name: scaffold0431
Description:

Target: scaffold0431; HSP #1
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 69 - 143
Target Start/End: Complemental strand, 14931 - 14857
Alignment:
Q  69 gaatgcactacgtgagttctctatttatagagaaaattcacaactaatatgtgagaaactctaggaacaagtaat 143  Q
    |||||||||  |||||||||||||||||||||| | || |||||||||| |||||||||| | | ||||||||||    
T  14931 gaatgcactgtgtgagttctctatttatagagatagtttacaactaataagtgagaaactttggaaacaagtaat 14857  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0415 (Bit Score: 39; Significance: 0.0000000000004; HSPs: 1)
Name: scaffold0415
Description:

Target: scaffold0415; HSP #1
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 69 - 127
Target Start/End: Original strand, 1128 - 1186
Alignment:
Q  69 gaatgcactacgtgagttctctatttatagagaaaattcacaactaatatgtgagaaac 127  Q
    |||||||||  |||||||||||||||||||||| |||| |||||||||| |||||||||    
T  1128 gaatgcactgtgtgagttctctatttatagagataatttacaactaataagtgagaaac 1186  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0020 (Bit Score: 39; Significance: 0.0000000000004; HSPs: 1)
Name: scaffold0020
Description:

Target: scaffold0020; HSP #1
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 152 - 241
Target Start/End: Complemental strand, 637 - 547
Alignment:
Q  152 acttttggagtaagtaattcacatattagatctagtataaaaatatctc-gatcgagtgccaagatatatcatattgagtacgaaagatat 241  Q
    ||||| |||| ||||||||| |||||||||||||||| |||||||||||  || ||||  ||| |||||||||||||||||| ||| ||||    
T  637 actttgggagcaagtaattctcatattagatctagtacaaaaatatctcaaattgagtctcaaaatatatcatattgagtacaaaatatat 547  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0044 (Bit Score: 37; Significance: 0.000000000006; HSPs: 2)
Name: scaffold0044
Description:

Target: scaffold0044; HSP #1
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 87 - 143
Target Start/End: Original strand, 64818 - 64874
Alignment:
Q  87 ctctatttatagagaaaattcacaactaatatgtgagaaactctaggaacaagtaat 143  Q
    ||||||||||||||||| ||| ||||||||| |||||||||| | ||||||||||||    
T  64818 ctctatttatagagaaacttcccaactaataggtgagaaactttgggaacaagtaat 64874  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0044; HSP #2
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 87 - 143
Target Start/End: Original strand, 81216 - 81272
Alignment:
Q  87 ctctatttatagagaaaattcacaactaatatgtgagaaactctaggaacaagtaat 143  Q
    ||||||||||||||||| ||| ||||||||| |||||||||| | ||||||||||||    
T  81216 ctctatttatagagaaacttcccaactaataggtgagaaactttgggaacaagtaat 81272  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0011 (Bit Score: 36; Significance: 0.00000000002; HSPs: 3)
Name: scaffold0011
Description:

Target: scaffold0011; HSP #1
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 69 - 128
Target Start/End: Original strand, 127043 - 127102
Alignment:
Q  69 gaatgcactacgtgagttctctatttatagagaaaattcacaactaatatgtgagaaact 128  Q
    |||||||||  |||||||||||||||||||||| | || |||||||||| ||||||||||    
T  127043 gaatgcactgtgtgagttctctatttatagagatagtttacaactaataagtgagaaact 127102  T

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Target: scaffold0011; HSP #2
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 18 - 53
Target Start/End: Complemental strand, 145906 - 145871
Alignment:
Q  18 agggagaagagagaaagagttctcgacaactcaata 53  Q
    ||||||||||||||||||||| ||||||||||||||    
T  145906 agggagaagagagaaagagttatcgacaactcaata 145871  T

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Target: scaffold0011; HSP #3
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 163 - 232
Target Start/End: Original strand, 127111 - 127180
Alignment:
Q  163 aagtaattcacatattagatctagtataaaaatatctcgatcgagtgccaagatatatcatattgagtac 232  Q
    ||||||| ||| ||||||||||||||   ||||||||| || ||||||||| |||||| ||||| |||||    
T  127111 aagtaatgcacctattagatctagtacttaaatatctcaattgagtgccaaaatatattatattaagtac 127180  T

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Target: scaffold0628 (Bit Score: 35; Significance: 0.00000000009; HSPs: 1)
Name: scaffold0628
Description:

Target: scaffold0628; HSP #1
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 69 - 143
Target Start/End: Original strand, 7028 - 7102
Alignment:
Q  69 gaatgcactacgtgagttctctatttatagagaaaattcacaactaatatgtgagaaactctaggaacaagtaat 143  Q
    |||||||||  |||||||||||||||||||||| | || |||||||||| || ||||||| | | ||||||||||    
T  7028 gaatgcactgtgtgagttctctatttatagagatagtttacaactaataagttagaaactttggaaacaagtaat 7102  T

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Target: scaffold0240 (Bit Score: 35; Significance: 0.00000000009; HSPs: 1)
Name: scaffold0240
Description:

Target: scaffold0240; HSP #1
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 6 - 56
Target Start/End: Original strand, 4571 - 4620
Alignment:
Q  6 aacacaagctggagggagaagagagaaagagttctcgacaactcaatataa 56  Q
    |||||||| |||||| |||||||||||||||||||||| ||||||||||||    
T  4571 aacacaagttggagg-agaagagagaaagagttctcgaaaactcaatataa 4620  T

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Target: scaffold0031 (Bit Score: 35; Significance: 0.00000000009; HSPs: 1)
Name: scaffold0031
Description:

Target: scaffold0031; HSP #1
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 69 - 143
Target Start/End: Complemental strand, 35465 - 35391
Alignment:
Q  69 gaatgcactacgtgagttctctatttatagagaaaattcacaactaatatgtgagaaactctaggaacaagtaat 143  Q
    |||||||||  ||||||||||||||||||||||   || |||||||||| |||||||||| | | ||||||||||    
T  35465 gaatgcactgtgtgagttctctatttatagagattgtttacaactaataagtgagaaactttggaaacaagtaat 35391  T

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Target: scaffold0018 (Bit Score: 35; Significance: 0.00000000009; HSPs: 1)
Name: scaffold0018
Description:

Target: scaffold0018; HSP #1
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 69 - 143
Target Start/End: Original strand, 21947 - 22021
Alignment:
Q  69 gaatgcactacgtgagttctctatttatagagaaaattcacaactaatatgtgagaaactctaggaacaagtaat 143  Q
    |||||||||  |||||||||||||||||||||| | || |||||| ||| |||||||||| | | ||||||||||    
T  21947 gaatgcactgtgtgagttctctatttatagagatagtttacaacttataagtgagaaactttggaaacaagtaat 22021  T

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Target: scaffold0690 (Bit Score: 34; Significance: 0.0000000004; HSPs: 1)
Name: scaffold0690
Description:

Target: scaffold0690; HSP #1
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 8 - 53
Target Start/End: Original strand, 5829 - 5874
Alignment:
Q  8 cacaagctggagggagaagagagaaagagttctcgacaactcaata 53  Q
    |||||| || ||||||||||||||||||||| ||||||||||||||    
T  5829 cacaagatgcagggagaagagagaaagagttatcgacaactcaata 5874  T

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Target: scaffold0041 (Bit Score: 33; Significance: 0.000000001; HSPs: 2)
Name: scaffold0041
Description:

Target: scaffold0041; HSP #1
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 153 - 232
Target Start/End: Complemental strand, 35100 - 35020
Alignment:
Q  153 cttttggagtaagtaattcacatattagatctagtataaaaatatctc-gatcgagtgccaagatatatcatattgagtac 232  Q
    |||| |||| ||||||||| |||||||||| ||||| |||||||||||  || ||||  ||| ||||||||||||||||||    
T  35100 ctttgggagcaagtaattctcatattagatatagtacaaaaatatctcaaattgagtctcaaaatatatcatattgagtac 35020  T

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Target: scaffold0041; HSP #2
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 80 - 144
Target Start/End: Complemental strand, 35147 - 35083
Alignment:
Q  80 gtgagttctctatttatagagaaaattcacaactaatatgtgagaaactctaggaacaagtaatt 144  Q
    ||||| |||||||||||||||||| ||||||||||||| |||| || || | ||| |||||||||    
T  35147 gtgagctctctatttatagagaaagttcacaactaataagtgacaagctttgggagcaagtaatt 35083  T

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Target: scaffold0004 (Bit Score: 33; Significance: 0.000000001; HSPs: 1)
Name: scaffold0004
Description:

Target: scaffold0004; HSP #1
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 80 - 144
Target Start/End: Original strand, 199841 - 199905
Alignment:
Q  80 gtgagttctctatttatagagaaaattcacaactaatatgtgagaaactctaggaacaagtaatt 144  Q
    ||||| |||||||||||||||||| ||| ||||||||| |||||||||  | || ||||||||||    
T  199841 gtgagctctctatttatagagaaacttcgcaactaataggtgagaaacattggggacaagtaatt 199905  T

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Target: scaffold0292 (Bit Score: 32; Significance: 0.000000006; HSPs: 1)
Name: scaffold0292
Description:

Target: scaffold0292; HSP #1
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 69 - 128
Target Start/End: Original strand, 7807 - 7866
Alignment:
Q  69 gaatgcactacgtgagttctctatttatagagaaaattcacaactaatatgtgagaaact 128  Q
    |||||||||  |||||||||||||||||||||| | || |||||||||| | ||||||||    
T  7807 gaatgcactgtgtgagttctctatttatagagatagtttacaactaataagcgagaaact 7866  T

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Target: scaffold0002 (Bit Score: 31; Significance: 0.00000002; HSPs: 1)
Name: scaffold0002
Description:

Target: scaffold0002; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 18 - 52
Target Start/End: Original strand, 4675 - 4709
Alignment:
Q  18 agggagaagagagaaagagttctcgacaactcaat 52  Q
    |||||||||||||||||||||| ||||||||||||    
T  4675 agggagaagagagaaagagttcccgacaactcaat 4709  T

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Target: scaffold0575 (Bit Score: 30; Significance: 0.00000009; HSPs: 1)
Name: scaffold0575
Description:

Target: scaffold0575; HSP #1
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 71 - 128
Target Start/End: Complemental strand, 5333 - 5276
Alignment:
Q  71 atgcactacgtgagttctctatttatagagaaaattcacaactaatatgtgagaaact 128  Q
    |||||||  ||||||||||||||||||| || | || |||||||||| ||||||||||    
T  5333 atgcactgtgtgagttctctatttatagggatagtttacaactaataagtgagaaact 5276  T

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