View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF10179_low_95 (Length: 244)
Name: NF10179_low_95
Description: NF10179
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF10179_low_95 |
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| [»] chr1 (1 HSPs) |
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Alignment Details
Target: chr1 (Bit Score: 227; Significance: 1e-125; HSPs: 1)
Name: chr1
Description:
Target: chr1; HSP #1
Raw Score: 227; E-Value: 1e-125
Query Start/End: Original strand, 18 - 244
Target Start/End: Original strand, 43348524 - 43348750
Alignment:
| Q |
18 |
atattccaatctaattaataaataattgacaaactcttgattaattttcctgcaggaaatgggaactgaagacttcagcttcccaaaaattaatgacact |
117 |
Q |
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| T |
43348524 |
atattccaatctaattaataaataattgacaaactcttgattaattttcctgcaggaaatgggaactgaagacttcagcttcccaaaaattaatgacact |
43348623 |
T |
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| Q |
118 |
tattcatatatcattgattcacctcctctttggaattcatcatcaacatcttcttctaataactcctaccaacaactcctaagagatcaaaaagattgct |
217 |
Q |
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| T |
43348624 |
tattcatatatcattgattcacctcctctttggaattcatcatcaacatcttcttctaataactcctaccaacaactcctaagagatcaaaaagattgct |
43348723 |
T |
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| Q |
218 |
atgaagaaaatttggtcttaaagggtc |
244 |
Q |
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| T |
43348724 |
atgaagaaaatttggtcttaaagggtc |
43348750 |
T |
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