View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF1017_low_4 (Length: 295)
Name: NF1017_low_4
Description: NF1017
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF1017_low_4 |
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Alignment Details
Target: chr7 (Bit Score: 211; Significance: 1e-115; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 211; E-Value: 1e-115
Query Start/End: Original strand, 57 - 271
Target Start/End: Original strand, 5286313 - 5286527
Alignment:
| Q |
57 |
tgtgttcattttctataaagggaccaaagctaacatgttgtgcatttgaaaatcttcagaatatatttggcataggtaatcttccattcatatatttggc |
156 |
Q |
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| T |
5286313 |
tgtgttcattttctataaagggaccaaagctaacatgttgtgcatttgaaaatcttcagaatatatttggcataggtaatcttccattcatatatttggc |
5286412 |
T |
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| Q |
157 |
tgttcctatttgcaaattgtaactagacaaaaggtgcatttttggacagatagatggctatctgaccctcttgtggagttactcaacatccctccttagt |
256 |
Q |
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| T |
5286413 |
tgttcctatttgcaaattgtaactagacaaaaggtacatttttggacagatagatggctatctgaccctcttgtggagttactcaacatccctccttagt |
5286512 |
T |
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| Q |
257 |
tgcatgcatattgtt |
271 |
Q |
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| T |
5286513 |
tgcatgcatattgtt |
5286527 |
T |
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