View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF10180_low_10 (Length: 250)
Name: NF10180_low_10
Description: NF10180
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF10180_low_10 |
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Alignment Details
Target: chr5 (Bit Score: 227; Significance: 1e-125; HSPs: 1)
Name: chr5
Description:
Target: chr5; HSP #1
Raw Score: 227; E-Value: 1e-125
Query Start/End: Original strand, 1 - 235
Target Start/End: Original strand, 12480931 - 12481165
Alignment:
| Q |
1 |
aaattttaaggcctgctagtgcaattctaatggatgacttattgtcacagaataacttcaaaggagcttcatattttatcttgaggtcatctggtatgta |
100 |
Q |
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| T |
12480931 |
aaattttaaggcctgctagtgcaattctaatggatgacttattgtcacagaataacttcaaaggagcttcatattttatcttgaggtcatctggtatgta |
12481030 |
T |
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| Q |
101 |
tgacttgaaattctacttgtcaccttagaagattgagaacatatttcctttgagagataaatatactttcctttgaagagagcaaggacccgtcttcgtc |
200 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||| || |
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| T |
12481031 |
tgacttgaaattctacttgtcaccttagaagattgagaacatatttcctttgagagataaatatactttcctttgaagagagcaaggacctgtcttcatc |
12481130 |
T |
|
| Q |
201 |
aatttgtgaggtctactgcgtaaagtagtgatgtc |
235 |
Q |
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||||||||||||||||||||||||||||||||||| |
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| T |
12481131 |
aatttgtgaggtctactgcgtaaagtagtgatgtc |
12481165 |
T |
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