View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF10180_low_3 (Length: 408)

Name: NF10180_low_3
Description: NF10180
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF10180_low_3
NF10180_low_3
[»] chr3 (4 HSPs)
chr3 (1-401)||(1233952-1234353)
chr3 (184-401)||(22937721-22937938)
chr3 (319-384)||(47771895-47771960)
chr3 (185-277)||(47771759-47771850)
[»] chr4 (6 HSPs)
chr4 (184-401)||(2824079-2824297)
chr4 (184-333)||(47246423-47246570)
chr4 (313-401)||(43041463-43041551)
chr4 (184-262)||(43046355-43046433)
chr4 (319-384)||(22024796-22024861)
chr4 (266-311)||(43041544-43041589)
[»] chr8 (2 HSPs)
chr8 (184-401)||(35779961-35780178)
chr8 (184-388)||(25319255-25319457)
[»] chr1 (4 HSPs)
chr1 (184-401)||(13113769-13113986)
chr1 (184-340)||(6607477-6607633)
chr1 (319-384)||(32446501-32446566)
chr1 (185-250)||(32446638-32446703)
[»] chr6 (2 HSPs)
chr6 (185-387)||(17797910-17798111)
chr6 (187-276)||(13545583-13545672)
[»] chr5 (2 HSPs)
chr5 (1-140)||(41967323-41967463)
chr5 (184-371)||(31805955-31806141)
[»] chr7 (4 HSPs)
chr7 (184-298)||(16361653-16361767)
chr7 (192-289)||(25988773-25988870)
chr7 (184-277)||(7635743-7635836)
chr7 (330-384)||(25988304-25988358)
[»] chr2 (3 HSPs)
chr2 (184-390)||(2468575-2468785)
chr2 (319-384)||(15348704-15348769)
chr2 (319-384)||(12564125-12564190)


Alignment Details
Target: chr3 (Bit Score: 299; Significance: 1e-168; HSPs: 4)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 299; E-Value: 1e-168
Query Start/End: Original strand, 1 - 401
Target Start/End: Complemental strand, 1234353 - 1233952
Alignment:
Q  1 ctttggtttggtcaaaacgttgatccttttttgaaccatcgagtcaaacaatgtatatgatcatttacattcttggacctaagactatttgaattattaa 100  Q
    ||||| |||||||||||| |||| |||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||| ||||||||    
T  1234353 ctttgttttggtcaaaactttgaaccttttttgaaccatcgagtgaaacaatgtatatgatcatttacattcttggacctaagactatttggattattaa 1234254  T
Q  101 cctttaattatggatggaaaacattgattttaaagtgatttatccacgagggaaactaaaatattcactcttggaannnnnnng--cacaagctaaaatg 198  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||           ||||||||||||||    
T  1234253 cctttaattatggatggaaaacattgattttaaagtgatttatccacgagggaaactaaaatattcactcttggattttcttttttcacaagctaaaatg 1234154  T
Q  199 agatatattaatattacgaatgaaacaccttgcataagatgtgcaaagagtgcaacaccactaattatttacaaacaacctgatgccaaaagggccgaca 298  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||  |||| ||||||||||||||||| || ||||||||||||||    
T  1234153 agatatattaatattacgaatgaaacaccttgcataagatgtgcaaagagtgcaacactgctaagtatttacaaacaacctggtgtcaaaagggccgaca 1234054  T
Q  299 ccgtcaacaaaaataacaaaaaattactgaagcactcccatacaaaggagcggacgagtacaccagtcataataactgtaattaaatgaagtagtctctg 398  Q
    |||||||||||||||||||||||||| ||  ||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||    
T  1234053 ccgtcaacaaaaataacaaaaaattattg-tgcacttccatacaaaggagcggacgagtacaccagtcataataactgtaattaaatgaagtagtctttg 1233955  T
Q  399 ctt 401  Q
    |||    
T  1233954 ctt 1233952  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 162; E-Value: 2e-86
Query Start/End: Original strand, 184 - 401
Target Start/End: Complemental strand, 22937938 - 22937721
Alignment:
Q  184 gcacaagctaaaatgagatatattaatattacgaatgaaacaccttgcataagatgtgcaaagagtgcaacaccactaattatttacaaacaacctgatg 283  Q
    |||||||||||||||||||||||||| ||| ||||||||||||| ||||||||||||||||||||||| |||||  ||| ||||||||||||||| ||||    
T  22937938 gcacaagctaaaatgagatatattaaaattgcgaatgaaacaccctgcataagatgtgcaaagagtgcgacaccgttaagtatttacaaacaacccgatg 22937839  T
Q  284 ccaaaagggccgacaccgtcaacaaaaataacaaaaaattactgaagcactcccatacaaaggagcggacgagtacaccagtcataataactgtaattaa 383  Q
    |||||||| ||||||||||||||||||||||||||||| |||||| |||||||||| ||||||||||||||| |||||||||||||||||||||||||||    
T  22937838 ccaaaaggaccgacaccgtcaacaaaaataacaaaaaactactgatgcactcccatccaaaggagcggacgaatacaccagtcataataactgtaattaa 22937739  T
Q  384 atgaagtagtctctgctt 401  Q
    |||||||||||| |||||    
T  22937738 atgaagtagtctttgctt 22937721  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 319 - 384
Target Start/End: Original strand, 47771895 - 47771960
Alignment:
Q  319 aaattactgaagcactcccatacaaaggagcggacgagtacaccagtcataataactgtaattaaa 384  Q
    |||||||||  ||||||||||||||||||| ||| | || ||||| |||||||||| |||||||||    
T  47771895 aaattactggtgcactcccatacaaaggaggggatgtgtccaccaatcataataacagtaattaaa 47771960  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 185 - 277
Target Start/End: Original strand, 47771759 - 47771850
Alignment:
Q  185 cacaagctaaaatgagatatattaatattacgaatgaaacaccttgcataagatgtgcaaagagtgcaacaccactaattatttacaaacaac 277  Q
    ||||||||||||| ||||||||||||| | | ||||||||||  |||| |||| ||||||| ||||  ||||  |||| |||||||| |||||    
T  47771759 cacaagctaaaat-agatatattaataatgcaaatgaaacactctgcacaagacgtgcaaaaagtgagacacggctaaatatttacagacaac 47771850  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 163; Significance: 6e-87; HSPs: 6)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 163; E-Value: 6e-87
Query Start/End: Original strand, 184 - 401
Target Start/End: Complemental strand, 2824297 - 2824079
Alignment:
Q  184 gcacaagctaaaatgagatatattaatattacgaatgaaacaccttgcataagatgtgcaaagagtgcaacaccactaattatttacaaacaacctgatg 283  Q
    ||||||| |||||||||||||||||||||| ||||||||||||| |||| |||||||||||||||||  |||||||||| ||||||||||||||||| ||    
T  2824297 gcacaagttaaaatgagatatattaatattgcgaatgaaacaccatgcacaagatgtgcaaagagtgggacaccactaagtatttacaaacaacctggtg 2824198  T
Q  284 ccaaaagggccgacaccgtcaa-caaaaataacaaaaaattactgaagcactcccatacaaaggagcggacgagtacaccagtcataataactgtaatta 382  Q
    |||||||||||||||||||||| |||||||||||||||||||| || |||||||||||||||| ||||||||||||||||||||||||||||||||||||    
T  2824197 ccaaaagggccgacaccgtcaatcaaaaataacaaaaaattacggatgcactcccatacaaagaagcggacgagtacaccagtcataataactgtaatta 2824098  T
Q  383 aatgaagtagtctctgctt 401  Q
    ||||||||||||| |||||    
T  2824097 aatgaagtagtctttgctt 2824079  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 86; E-Value: 5e-41
Query Start/End: Original strand, 184 - 333
Target Start/End: Original strand, 47246423 - 47246570
Alignment:
Q  184 gcacaagctaaaatgagatatattaatattacgaatgaaacaccttgcataagatgtgcaaagagtgcaacaccactaattatttacaaacaacctgatg 283  Q
    ||||||| |||||||||||||| ||||||| |||||||| |||| |||| |||||||||||||||| | | ||| |||| ||||||||||||||||||||    
T  47246423 gcacaagttaaaatgagatataataatattgcgaatgaa-caccatgcacaagatgtgcaaagagtacgataccgctaagtatttacaaacaacctgatg 47246521  T
Q  284 ccaaaagggccgacaccgtcaacaaaaataacaaaaaattactgaagcac 333  Q
    ||||||||||||||| ||||| ||||||||||||||||||||||| ||||    
T  47246522 ccaaaagggccgaca-cgtcatcaaaaataacaaaaaattactgatgcac 47246570  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 313 - 401
Target Start/End: Complemental strand, 43041551 - 43041463
Alignment:
Q  313 aacaaaaaattactgaagcactcccatacaaaggagcggacgagtacaccagtcataataactgtaattaaatgaagtagtctctgctt 401  Q
    ||||||||| |||||| |||||||||||||||||||||||||||||||||||||||||||||||||| ||| ||||||| ||| |||||    
T  43041551 aacaaaaaactactgatgcactcccatacaaaggagcggacgagtacaccagtcataataactgtaactaagtgaagtactctttgctt 43041463  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 184 - 262
Target Start/End: Complemental strand, 43046433 - 43046355
Alignment:
Q  184 gcacaagctaaaatgagatatattaatattacgaatgaaacaccttgcataagatgtgcaaagagtgcaacaccactaa 262  Q
    |||||||||||||||||||||||||| ||| || |||||||| |  ||| ||||| |||||||||||||||||||||||    
T  43046433 gcacaagctaaaatgagatatattaaaattgcgcatgaaacatccggcaaaagatatgcaaagagtgcaacaccactaa 43046355  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 319 - 384
Target Start/End: Complemental strand, 22024861 - 22024796
Alignment:
Q  319 aaattactgaagcactcccatacaaaggagcggacgagtacaccagtcataataactgtaattaaa 384  Q
    |||||||||  ||||||||||||||||||||||| | || || || |||||||||| |||||||||    
T  22024861 aaattactggtgcactcccatacaaaggagcggatgtgtccatcaatcataataacagtaattaaa 22024796  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 266 - 311
Target Start/End: Complemental strand, 43041589 - 43041544
Alignment:
Q  266 tttacaaacaacctgatgccaaaagggccgacaccgtcaacaaaaa 311  Q
    ||||||||||||| | |||||||||  |||||||||||||||||||    
T  43041589 tttacaaacaacccggtgccaaaagaaccgacaccgtcaacaaaaa 43041544  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 142; Significance: 2e-74; HSPs: 2)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 142; E-Value: 2e-74
Query Start/End: Original strand, 184 - 401
Target Start/End: Original strand, 35779961 - 35780178
Alignment:
Q  184 gcacaagctaaaatgagatatattaatattacgaatgaaacaccttgcataagatgtgcaaagagtgcaacaccactaattatttacaaacaacctgatg 283  Q
    |||||||||||||||||||||||||| ||| || |||||||||| |||| |||||||||||||||||| ||||| |||| ||||||||||||||| | ||    
T  35779961 gcacaagctaaaatgagatatattaaaattgcgcatgaaacaccctgcacaagatgtgcaaagagtgcgacaccgctaagtatttacaaacaacccggtg 35780060  T
Q  284 ccaaaagggccgacaccgtcaacaaaaataacaaaaaattactgaagcactcccatacaaaggagcggacgagtacaccagtcataataactgtaattaa 383  Q
    ||||| |  ||||||||||||||||||||||||||||| |||||| ||||||||||||||||||||||||||||||| |||||||||||||||||| |||    
T  35780061 ccaaaggaaccgacaccgtcaacaaaaataacaaaaaactactgatgcactcccatacaaaggagcggacgagtacatcagtcataataactgtaactaa 35780160  T
Q  384 atgaagtagtctctgctt 401  Q
    |||||||| ||| |||||    
T  35780161 atgaagtactctttgctt 35780178  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 114; E-Value: 1e-57
Query Start/End: Original strand, 184 - 388
Target Start/End: Original strand, 25319255 - 25319457
Alignment:
Q  184 gcacaagctaaaatgagatatattaatattacgaatgaaacaccttgcataagatgtgcaaagagtgcaacaccactaattatttacaaacaacctgatg 283  Q
    |||||||||||||||||||||||||| | | || |||||||||| |||| |||||||||||||||||| ||||| |||| |||||||||||||   | ||    
T  25319255 gcacaagctaaaatgagatatattaaaaatgcgtatgaaacaccctgcacaagatgtgcaaagagtgccacaccgctaaatatttacaaacaattcggtg 25319354  T
Q  284 ccaaaagggccgacaccgtcaacaaaaataacaaaaaattactgaagcactcccatacaaaggagcggacgagtacaccagtcataataactgtaattaa 383  Q
    |||||||  ||||||||||||||||||  ||||| ||| |||||| ||||||||||||||||||||||||||||||||||||||| |||||||||| |||    
T  25319355 ccaaaagaaccgacaccgtcaacaaaa--aacaagaaactactgatgcactcccatacaaaggagcggacgagtacaccagtcattataactgtaactaa 25319452  T
Q  384 atgaa 388  Q
    |||||    
T  25319453 atgaa 25319457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 130; Significance: 3e-67; HSPs: 4)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 130; E-Value: 3e-67
Query Start/End: Original strand, 184 - 401
Target Start/End: Complemental strand, 13113986 - 13113769
Alignment:
Q  184 gcacaagctaaaatgagatatattaatattacgaatgaaacaccttgcataagatgtgcaaagagtgcaacaccactaattatttacaaacaacctgatg 283  Q
    |||||||||||||||||||||||||| | | || |||||||||| |||| ||||| |||||||||||| ||||| ||||  |||||||||||| | | ||    
T  13113986 gcacaagctaaaatgagatatattaaaaatgcgcatgaaacaccctgcacaagatatgcaaagagtgcgacaccgctaagaatttacaaacaatccggtg 13113887  T
Q  284 ccaaaagggccgacaccgtcaacaaaaataacaaaaaattactgaagcactcccatacaaaggagcggacgagtacaccagtcataataactgtaattaa 383  Q
    |||||||  ||||||||||||||||||||||||||||| |||||| ||||||||||| |||||||||||||||||||||||||||||||||||||| |||    
T  13113886 ccaaaagaaccgacaccgtcaacaaaaataacaaaaaactactgatgcactcccatataaaggagcggacgagtacaccagtcataataactgtaactaa 13113787  T
Q  384 atgaagtagtctctgctt 401  Q
    |||||||| ||| |||||    
T  13113786 atgaagtactctttgctt 13113769  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 93; E-Value: 4e-45
Query Start/End: Original strand, 184 - 340
Target Start/End: Original strand, 6607477 - 6607633
Alignment:
Q  184 gcacaagctaaaatgagatatattaatattacgaatgaaacaccttgcataagatgtgcaaagagtgcaacaccactaattatttacaaacaacctgatg 283  Q
    |||||||||||||||||||||||||| ||| || |||||||||| |||| |||||||||||||||||| || || |||| ||||||||||||||| | ||    
T  6607477 gcacaagctaaaatgagatatattaaaattgcgcatgaaacaccctgcacaagatgtgcaaagagtgcgactccgctaagtatttacaaacaacccggtg 6607576  T
Q  284 ccaaaagggccgacaccgtcaacaaaaataacaaaaaattactgaagcactcccata 340  Q
    |||||||  ||||||||||||||||||||||||||||| |||| | |||||||||||    
T  6607577 ccaaaagaaccgacaccgtcaacaaaaataacaaaaaactactaatgcactcccata 6607633  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 319 - 384
Target Start/End: Complemental strand, 32446566 - 32446501
Alignment:
Q  319 aaattactgaagcactcccatacaaaggagcggacgagtacaccagtcataataactgtaattaaa 384  Q
    |||||||||| ||||||||||||||||||||||| | || |||||||||||| |||  ||||||||    
T  32446566 aaattactgatgcactcccatacaaaggagcggatgtgtccaccagtcataaaaacaataattaaa 32446501  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 185 - 250
Target Start/End: Complemental strand, 32446703 - 32446638
Alignment:
Q  185 cacaagctaaaatgagatatattaatattacgaatgaaacaccttgcataagatgtgcaaagagtg 250  Q
    ||||||||||||||||||||||||| ||| |  |||||| ||| |||| |||| ||||||| ||||    
T  32446703 cacaagctaaaatgagatatattaaaattgcacatgaaataccctgcacaagacgtgcaaaaagtg 32446638  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 115; Significance: 3e-58; HSPs: 2)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 115; E-Value: 3e-58
Query Start/End: Original strand, 185 - 387
Target Start/End: Original strand, 17797910 - 17798111
Alignment:
Q  185 cacaagctaaaatgagatatattaatattacgaatgaaacaccttgcataagatgtgcaaagagtgcaacaccactaattatttacaaacaacctgatgc 284  Q
    ||||||||||||||||||||||||| | | || |||||||||| ||||||||||||||||||||||| ||||| |||| |||||  |||||| | | |||    
T  17797910 cacaagctaaaatgagatatattaaaaatgcgcatgaaacaccctgcataagatgtgcaaagagtgcgacaccgctaagtatttgtaaacaatccggtgc 17798009  T
Q  285 caaaagggccgacaccgtcaacaaaaataacaaaaaattactgaagcactcccatacaaaggagcggacgagtacaccagtcataataactgtaattaaa 384  Q
    || |||   |||||||||||||||||| ||||||||| |||||| |||||||||||||||||||||||||||||||||||||||||||||||||| ||||    
T  17798010 cagaagaatcgacaccgtcaacaaaaa-aacaaaaaactactgatgcactcccatacaaaggagcggacgagtacaccagtcataataactgtaactaaa 17798108  T
Q  385 tga 387  Q
    |||    
T  17798109 tga 17798111  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 187 - 276
Target Start/End: Complemental strand, 13545672 - 13545583
Alignment:
Q  187 caagctaaaatgagatatattaatattacgaatgaaacaccttgcataagatgtgcaaagagtgcaacaccactaattatttacaaacaa 276  Q
    ||||||||||||||||||||||||| | |  |||||||||| |||| ||||| || ||| ||||  || || |||| |||||||| ||||    
T  13545672 caagctaaaatgagatatattaataatgcagatgaaacaccctgcacaagatatgtaaaaagtgagacgccgctaaatatttacagacaa 13545583  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 105; Significance: 2e-52; HSPs: 2)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 105; E-Value: 2e-52
Query Start/End: Original strand, 1 - 140
Target Start/End: Complemental strand, 41967463 - 41967323
Alignment:
Q  1 ctttggtttggtcaaaacgttgatccttttttgaaccatcgagtcaaacaatgtatatgatcatttacattcttggacctaagactatttgaattattaa 100  Q
    ||||| |||||||||||| |||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| |||| |||    
T  41967463 ctttgttttggtcaaaactttgagccttttttgaaccatcgagtcaaacaatgtatatgatcatttacattcttggacccaagactatttggattagtaa 41967364  T
Q  101 cctttaattatggatggaaaacattga-ttttaaagtgatt 140  Q
    |||||||||||||| |||||||||||| |||||||||||||    
T  41967363 cctttaattatggaaggaaaacattgatttttaaagtgatt 41967323  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 96; E-Value: 6e-47
Query Start/End: Original strand, 184 - 371
Target Start/End: Complemental strand, 31806141 - 31805955
Alignment:
Q  184 gcacaagctaaaatgagatatattaatattacgaatgaaacaccttgcataagatgtgcaaagagtgcaacaccactaattatttacaaacaacctgatg 283  Q
    ||||||| |||||||| ||||||||| |||  | ||||||||||||| | ||||||| |||||||||| | || | ||| |||||||| |||||||  ||    
T  31806141 gcacaagttaaaatgaaatatattaaaattgtggatgaaacaccttgtacaagatgtacaaagagtgcgatacaattaagtatttacatacaacctagtg 31806042  T
Q  284 ccaaaagggccgacaccgtcaacaaaaataacaaaaaattactgaagcactcccatacaaaggagcggacgagtacaccagtcataat 371  Q
    |||||||||||||||| || ||||||||||||||||||||||||| ||||||||||||||| |||||||||||||||| |||||||||    
T  31806041 ccaaaagggccgacactgttaacaaaaataacaaaaaattactgatgcactcccatacaaa-gagcggacgagtacacgagtcataat 31805955  T

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Target: chr7 (Bit Score: 75; Significance: 2e-34; HSPs: 4)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 184 - 298
Target Start/End: Complemental strand, 16361767 - 16361653
Alignment:
Q  184 gcacaagctaaaatgagatatattaatattacgaatgaaacaccttgcataagatgtgcaaagagtgcaacaccactaattatttacaaacaacctgatg 283  Q
    ||||||| |||||||| ||||||||||||| ||||||||||||| |||| |||||||||||||||||| ||||| |||| |||||||||||||| || ||    
T  16361767 gcacaagttaaaatgacatatattaatattgcgaatgaaacaccctgcacaagatgtgcaaagagtgcgacaccgctaagtatttacaaacaacatggtg 16361668  T
Q  284 ccaaaagggccgaca 298  Q
    |||||||||||||||    
T  16361667 ccaaaagggccgaca 16361653  T

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Target: chr7; HSP #2
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 192 - 289
Target Start/End: Complemental strand, 25988870 - 25988773
Alignment:
Q  192 taaaatgagatatattaatattacgaatgaaacaccttgcataagatgtgcaaagagtgcaacaccactaattatttacaaacaacctgatgccaaaa 289  Q
    |||||||| ||||||||||||| || |||||||||| || | |||||||||||| ||||  ||||| | || |||||||| |||||||| ||||||||    
T  25988870 taaaatgaaatatattaatattgcggatgaaacaccctgtacaagatgtgcaaaaagtgagacaccgcaaagtatttacagacaacctggtgccaaaa 25988773  T

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Target: chr7; HSP #3
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 184 - 277
Target Start/End: Complemental strand, 7635836 - 7635743
Alignment:
Q  184 gcacaagctaaaatgagatatattaatattacgaatgaaacaccttgcataagatgtgcaaagagtgcaacaccactaattatttacaaacaac 277  Q
    |||||||||||||||||||||| ||||| | | ||||||||| | |||| |||| ||||||| ||||  ||||| |||| |||||||| |||||    
T  7635836 gcacaagctaaaatgagatataataataatgcaaatgaaacatcctgcacaagacgtgcaaaaagtgagacaccgctaaatatttacagacaac 7635743  T

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Target: chr7; HSP #4
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 330 - 384
Target Start/End: Complemental strand, 25988358 - 25988304
Alignment:
Q  330 gcactcccatacaaaggagcggacgagtacaccagtcataataactgtaattaaa 384  Q
    ||||||||||||||||| ||||| | |  ||||||||||||||| ||||||||||    
T  25988358 gcactcccatacaaaggggcggatgtgcccaccagtcataataattgtaattaaa 25988304  T

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Target: chr2 (Bit Score: 49; Significance: 7e-19; HSPs: 3)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 184 - 390
Target Start/End: Complemental strand, 2468785 - 2468575
Alignment:
Q  184 gcacaagctaaaatgagatatattaatattacgaatgaaacaccttgcataagatgtgcaaagagtgcaac----accactaattatttacaaacaacct 279  Q
    |||||||||||||||||||||||||||||| || |||||||||| |||| |||||||||||| ||||  ||    |   |||| |||||||| |||||||    
T  2468785 gcacaagctaaaatgagatatattaatattgcggatgaaacaccctgcacaagatgtgcaaaaagtgagacaattaatgctaagtatttacagacaacct 2468686  T
Q  280 gatgccaaaagggccgacaccgtcaacaaaaataaca--aaaaattactgaagcactcccatacaaaggagcggacgagtacaccagtcataataactgt 377  Q
    | |||||||| | | | |||| | || ||||  ||||  || ||||||||  ||||||||||||||||||||||| |    ||||||||||||||| |||    
T  2468685 ggtgccaaaaagacag-caccct-aaaaaaataaacagtaagaattactggtgcactcccatacaaaggagcggatgtacccaccagtcataataattgt 2468588  T
Q  378 aattaaatgaagt 390  Q
    ||||||| |||||    
T  2468587 aattaaaagaagt 2468575  T

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Target: chr2; HSP #2
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 319 - 384
Target Start/End: Original strand, 15348704 - 15348769
Alignment:
Q  319 aaattactgaagcactcccatacaaaggagcggacgagtacaccagtcataataactgtaattaaa 384  Q
    |||||||||| ||||||||||||||||||||||| |  | |||||||||||| |||  ||||||||    
T  15348704 aaattactgatgcactcccatacaaaggagcggatgtttccaccagtcataaaaacaataattaaa 15348769  T

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Target: chr2; HSP #3
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 319 - 384
Target Start/End: Original strand, 12564125 - 12564190
Alignment:
Q  319 aaattactgaagcactcccatacaaaggagcggacgagtacaccagtcataataactgtaattaaa 384  Q
    |||||||||  ||||||||||||| ||||| ||| | || ||||| |||||||||| |||||||||    
T  12564125 aaattactggtgcactcccatacagaggaggggatgtgtccaccaatcataataacagtaattaaa 12564190  T

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