View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF10182_high_2 (Length: 384)

Name: NF10182_high_2
Description: NF10182
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF10182_high_2
NF10182_high_2
[»] chr2 (57 HSPs)
chr2 (143-265)||(7681953-7682079)
chr2 (143-264)||(3769697-3769823)
chr2 (146-264)||(9689324-9689446)
chr2 (147-264)||(38987096-38987217)
chr2 (143-263)||(44542981-44543106)
chr2 (143-263)||(44257592-44257716)
chr2 (143-264)||(22301927-22302051)
chr2 (143-264)||(30406409-30406535)
chr2 (143-264)||(33173630-33173756)
chr2 (147-264)||(39904791-39904913)
chr2 (146-264)||(19630700-19630823)
chr2 (146-264)||(19827601-19827724)
chr2 (143-264)||(2586513-2586639)
chr2 (143-264)||(22710985-22711107)
chr2 (147-253)||(39906229-39906339)
chr2 (186-264)||(23175341-23175419)
chr2 (186-264)||(23586598-23586676)
chr2 (143-253)||(1297550-1297664)
chr2 (143-241)||(4293176-4293278)
chr2 (196-264)||(3352273-3352342)
chr2 (143-228)||(6332261-6332350)
chr2 (153-253)||(20939670-20939774)
chr2 (204-253)||(15554222-15554271)
chr2 (200-264)||(18370412-18370477)
chr2 (178-251)||(41088854-41088927)
chr2 (203-264)||(42850199-42850260)
chr2 (143-220)||(15554015-15554096)
chr2 (204-264)||(44542795-44542855)
chr2 (178-249)||(17264893-17264964)
chr2 (203-264)||(34082750-34082811)
chr2 (203-264)||(41927562-41927623)
chr2 (204-264)||(3769400-3769460)
chr2 (204-264)||(33173445-33173505)
chr2 (203-264)||(16513023-16513085)
chr2 (204-261)||(6332476-6332533)
chr2 (204-264)||(7682204-7682265)
chr2 (203-252)||(33740137-33740186)
chr2 (203-264)||(37169739-37169800)
chr2 (208-264)||(9690362-9690418)
chr2 (204-264)||(23233998-23234058)
chr2 (204-264)||(39906470-39906530)
chr2 (203-249)||(8386883-8386929)
chr2 (214-264)||(9282106-9282156)
chr2 (210-264)||(39904601-39904655)
chr2 (203-248)||(29512041-29512086)
chr2 (204-264)||(38986907-38986965)
chr2 (204-264)||(8741695-8741755)
chr2 (205-264)||(13001971-13002031)
chr2 (204-264)||(20939910-20939970)
chr2 (204-264)||(30406661-30406721)
chr2 (204-262)||(9689576-9689635)
chr2 (207-261)||(41527811-41527866)
chr2 (203-264)||(1750138-1750200)
chr2 (204-264)||(44257403-44257464)
chr2 (143-200)||(9690171-9690232)
chr2 (222-261)||(16074997-16075037)
chr2 (203-251)||(27337049-27337097)
[»] chr7 (70 HSPs)
chr7 (143-264)||(12080835-12080960)
chr7 (1-103)||(43711728-43711830)
chr7 (143-263)||(33889893-33890017)
chr7 (146-264)||(11327736-11327859)
chr7 (143-264)||(8047908-8048034)
chr7 (143-264)||(27812078-27812204)
chr7 (143-264)||(32852993-32853119)
chr7 (143-264)||(27597169-27597294)
chr7 (143-264)||(45225530-45225655)
chr7 (143-261)||(37138873-37138996)
chr7 (143-264)||(20517057-20517183)
chr7 (152-264)||(32577715-32577832)
chr7 (143-264)||(28605577-28605702)
chr7 (143-262)||(18829834-18829958)
chr7 (152-264)||(34986671-34986787)
chr7 (158-264)||(4655201-4655312)
chr7 (145-264)||(15230203-15230325)
chr7 (143-272)||(24720397-24720532)
chr7 (146-264)||(26380010-26380133)
chr7 (144-264)||(48454480-48454604)
chr7 (154-253)||(18199720-18199823)
chr7 (179-253)||(48193364-48193438)
chr7 (143-260)||(7437737-7437859)
chr7 (143-264)||(14718930-14719055)
chr7 (152-264)||(18123016-18123133)
chr7 (143-228)||(38876139-38876228)
chr7 (143-260)||(14770211-14770333)
chr7 (143-260)||(15220662-15220784)
chr7 (159-253)||(22479358-22479456)
chr7 (200-264)||(38368037-38368101)
chr7 (143-264)||(43712049-43712177)
chr7 (203-264)||(41037309-41037370)
chr7 (204-264)||(26380263-26380323)
chr7 (204-264)||(4654995-4655055)
chr7 (200-264)||(38797006-38797070)
chr7 (204-264)||(45225210-45225270)
chr7 (203-264)||(938845-938907)
chr7 (203-264)||(25818434-25818496)
chr7 (200-264)||(2936590-2936655)
chr7 (203-264)||(6559308-6559369)
chr7 (204-264)||(48454732-48454793)
chr7 (145-242)||(14778065-14778164)
chr7 (204-264)||(18123260-18123320)
chr7 (204-264)||(32577455-32577515)
chr7 (204-264)||(34986476-34986536)
chr7 (203-264)||(41407292-41407354)
chr7 (203-264)||(2509504-2509564)
chr7 (207-264)||(6736699-6736756)
chr7 (186-251)||(17327168-17327233)
chr7 (203-264)||(23739997-23740058)
chr7 (204-264)||(27811891-27811952)
chr7 (203-263)||(454056-454116)
chr7 (204-264)||(8048156-8048216)
chr7 (203-261)||(27168437-27168496)
chr7 (204-250)||(18199532-18199578)
chr7 (204-264)||(14719180-14719241)
chr7 (203-264)||(19069347-19069408)
chr7 (254-287)||(31029373-31029406)
chr7 (204-264)||(20516870-20516930)
chr7 (204-264)||(24720211-24720271)
chr7 (143-264)||(27168194-27168315)
chr7 (204-262)||(33889033-33889092)
chr7 (198-232)||(2362735-2362769)
chr7 (326-360)||(31029334-31029368)
chr7 (204-264)||(7437986-7438047)
chr7 (203-264)||(11766074-11766134)
chr7 (207-264)||(28605394-28605449)
chr7 (204-248)||(14770040-14770084)
chr7 (204-248)||(15220491-15220535)
chr7 (203-261)||(18352500-18352557)
[»] chr4 (82 HSPs)
chr4 (143-264)||(10216189-10216314)
chr4 (146-264)||(7630216-7630339)
chr4 (146-264)||(42807848-42807970)
chr4 (143-264)||(5157153-5157279)
chr4 (143-264)||(5046578-5046703)
chr4 (155-263)||(30258065-30258177)
chr4 (143-253)||(13621253-13621367)
chr4 (143-264)||(41172565-41172691)
chr4 (143-264)||(12584222-12584348)
chr4 (146-263)||(34682985-34683107)
chr4 (143-264)||(14202807-14202932)
chr4 (146-263)||(17377652-17377773)
chr4 (143-264)||(17745301-17745426)
chr4 (143-264)||(21519887-21520012)
chr4 (143-264)||(48560153-48560278)
chr4 (143-264)||(50182328-50182452)
chr4 (143-270)||(17181108-17181240)
chr4 (143-264)||(13211970-13212096)
chr4 (143-253)||(26958692-26958806)
chr4 (143-268)||(30820424-30820551)
chr4 (143-265)||(47382307-47382432)
chr4 (143-264)||(13371366-13371491)
chr4 (143-264)||(13381567-13381692)
chr4 (143-264)||(49970749-49970874)
chr4 (146-264)||(6214142-6214271)
chr4 (143-264)||(3818901-3819027)
chr4 (159-264)||(578694-578803)
chr4 (145-252)||(51783918-51784029)
chr4 (143-264)||(52437372-52437499)
chr4 (203-264)||(46106626-46106687)
chr4 (200-264)||(9744327-9744391)
chr4 (203-264)||(26335693-26335754)
chr4 (204-264)||(41172379-41172439)
chr4 (204-264)||(49426148-49426208)
chr4 (203-262)||(54742402-54742461)
chr4 (198-263)||(6137692-6137758)
chr4 (204-264)||(6213951-6214012)
chr4 (203-264)||(14862925-14862986)
chr4 (204-264)||(5046829-5046888)
chr4 (204-264)||(10981490-10981550)
chr4 (204-264)||(13211784-13211844)
chr4 (204-264)||(13621503-13621563)
chr4 (204-264)||(17180919-17180979)
chr4 (203-255)||(26958517-26958569)
chr4 (198-253)||(33811008-33811063)
chr4 (203-264)||(142585-142647)
chr4 (203-264)||(6946596-6946658)
chr4 (203-264)||(33105863-33105925)
chr4 (204-264)||(14203059-14203120)
chr4 (204-264)||(18470225-18470286)
chr4 (203-264)||(23384100-23384161)
chr4 (203-264)||(32012834-32012894)
chr4 (204-253)||(36955323-36955372)
chr4 (203-264)||(38425850-38425910)
chr4 (204-264)||(7630026-7630086)
chr4 (204-264)||(13621067-13621127)
chr4 (203-264)||(102367-102428)
chr4 (203-264)||(4490616-4490678)
chr4 (203-264)||(4505590-4505652)
chr4 (203-253)||(4712620-4712670)
chr4 (204-264)||(5156966-5157027)
chr4 (204-264)||(13371186-13371246)
chr4 (204-264)||(13381387-13381447)
chr4 (207-264)||(29101937-29101994)
chr4 (204-264)||(30820678-30820739)
chr4 (204-264)||(48559966-48560027)
chr4 (204-264)||(33811312-33811372)
chr4 (204-264)||(52306720-52306780)
chr4 (205-264)||(34683238-34683297)
chr4 (203-264)||(13211675-13211737)
chr4 (203-264)||(14948074-14948136)
chr4 (203-253)||(20459180-20459230)
chr4 (203-253)||(45875723-45875772)
chr4 (187-264)||(49606179-49606257)
chr4 (204-250)||(49970578-49970624)
chr4 (204-264)||(17745120-17745177)
chr4 (208-264)||(45801772-45801829)
chr4 (204-264)||(17377462-17377522)
chr4 (203-251)||(43638942-43638990)
chr4 (203-262)||(49605972-49606032)
chr4 (204-264)||(50182144-50182204)
chr4 (204-264)||(56532517-56532577)
[»] chr8 (55 HSPs)
chr8 (143-264)||(1782940-1783065)
chr8 (143-264)||(9483587-9483712)
chr8 (146-263)||(30577807-30577928)
chr8 (143-264)||(4018670-4018796)
chr8 (143-254)||(21442076-21442191)
chr8 (147-253)||(3154208-3154318)
chr8 (143-253)||(14819256-14819370)
chr8 (143-264)||(19971565-19971691)
chr8 (143-256)||(1775530-1775647)
chr8 (143-252)||(41942809-41942922)
chr8 (143-253)||(14826425-14826540)
chr8 (179-264)||(42556359-42556444)
chr8 (143-231)||(31071525-31071617)
chr8 (200-264)||(29377831-29377895)
chr8 (198-264)||(2823551-2823617)
chr8 (198-264)||(23053799-23053865)
chr8 (203-264)||(8258271-8258332)
chr8 (147-252)||(25280945-25281055)
chr8 (200-253)||(30207350-30207403)
chr8 (203-264)||(36901273-36901334)
chr8 (203-254)||(35550551-35550602)
chr8 (204-250)||(41943045-41943091)
chr8 (200-264)||(1281832-1281897)
chr8 (203-264)||(17952579-17952640)
chr8 (207-264)||(30633014-30633071)
chr8 (200-263)||(39934350-39934414)
chr8 (203-253)||(25128057-25128107)
chr8 (203-264)||(29125658-29125720)
chr8 (204-264)||(2178654-2178715)
chr8 (204-264)||(21442317-21442378)
chr8 (203-264)||(26630208-26630269)
chr8 (203-264)||(26867872-26867933)
chr8 (203-264)||(42556521-42556581)
chr8 (207-263)||(1783180-1783235)
chr8 (203-255)||(32512219-32512271)
chr8 (143-215)||(18804309-18804385)
chr8 (204-250)||(3154069-3154115)
chr8 (143-206)||(21021181-21021248)
chr8 (203-253)||(26042901-26042951)
chr8 (203-264)||(34103186-34103248)
chr8 (203-264)||(3369897-3369958)
chr8 (204-264)||(9483838-9483899)
chr8 (143-264)||(10616229-10616355)
chr8 (203-264)||(23161269-23161329)
chr8 (143-264)||(25127807-25127933)
chr8 (204-264)||(31071742-31071803)
chr8 (203-264)||(32069206-32069267)
chr8 (143-264)||(42556620-42556746)
chr8 (210-262)||(184692-184744)
chr8 (204-264)||(13290434-13290494)
chr8 (143-264)||(21352393-21352518)
chr8 (143-264)||(26629966-26630093)
chr8 (203-264)||(42556848-42556910)
chr8 (204-253)||(27545947-27545996)
chr8 (204-249)||(30578058-30578103)
[»] chr6 (50 HSPs)
chr6 (147-264)||(15881864-15881985)
chr6 (154-264)||(11100317-11100432)
chr6 (143-264)||(9955732-9955858)
chr6 (143-264)||(15962674-15962800)
chr6 (143-252)||(16599019-16599132)
chr6 (143-262)||(8172010-8172133)
chr6 (147-253)||(29646355-29646464)
chr6 (147-249)||(31132829-31132935)
chr6 (143-246)||(1369855-1369962)
chr6 (146-253)||(24022875-24022986)
chr6 (143-258)||(26667809-26667928)
chr6 (158-264)||(27828244-27828355)
chr6 (146-231)||(10777914-10778003)
chr6 (143-219)||(11210280-11210360)
chr6 (203-264)||(18102635-18102696)
chr6 (179-263)||(4184200-4184284)
chr6 (204-264)||(31133066-31133126)
chr6 (143-231)||(5187741-5187833)
chr6 (203-264)||(30525539-30525600)
chr6 (203-264)||(33730468-33730529)
chr6 (203-264)||(4838221-4838283)
chr6 (179-253)||(9406753-9406827)
chr6 (203-264)||(18154490-18154552)
chr6 (154-228)||(10196610-10196688)
chr6 (204-264)||(8171825-8171884)
chr6 (190-250)||(20755358-20755418)
chr6 (179-250)||(26211231-26211302)
chr6 (153-264)||(35002030-35002137)
chr6 (204-264)||(4184449-4184511)
chr6 (204-264)||(5187958-5188019)
chr6 (203-252)||(11010101-11010150)
chr6 (203-264)||(11098840-11098901)
chr6 (208-264)||(15882079-15882136)
chr6 (208-261)||(29646167-29646220)
chr6 (204-264)||(15718405-15718465)
chr6 (208-264)||(16599263-16599319)
chr6 (207-250)||(20755548-20755591)
chr6 (204-259)||(27828501-27828556)
chr6 (204-250)||(1370088-1370134)
chr6 (203-264)||(9406528-9406590)
chr6 (204-250)||(11100570-11100616)
chr6 (204-264)||(15962927-15962989)
chr6 (207-264)||(32194161-32194219)
chr6 (203-264)||(4898313-4898374)
chr6 (204-264)||(10315393-10315454)
chr6 (143-264)||(11742452-11742577)
chr6 (203-252)||(15718167-15718216)
chr6 (204-262)||(27902264-27902323)
chr6 (203-250)||(26211464-26211512)
chr6 (209-264)||(27902349-27902405)
[»] chr5 (63 HSPs)
chr5 (143-264)||(4736915-4737040)
chr5 (143-264)||(26906018-26906143)
chr5 (143-264)||(29302042-29302167)
chr5 (143-264)||(17209812-17209939)
chr5 (147-264)||(30687852-30687973)
chr5 (147-264)||(37249430-37249551)
chr5 (143-263)||(1807515-1807639)
chr5 (143-264)||(15809095-15809219)
chr5 (154-264)||(1921595-1921709)
chr5 (143-253)||(17559173-17559287)
chr5 (143-252)||(30667531-30667644)
chr5 (145-252)||(1951383-1951494)
chr5 (143-253)||(37282302-37282417)
chr5 (143-264)||(33282379-33282505)
chr5 (143-263)||(17605164-17605288)
chr5 (153-264)||(7014636-7014751)
chr5 (143-260)||(37468657-37468778)
chr5 (146-253)||(22282161-22282272)
chr5 (188-264)||(22213064-22213139)
chr5 (198-264)||(2528701-2528768)
chr5 (146-264)||(11448860-11448983)
chr5 (143-253)||(33026351-33026466)
chr5 (203-263)||(3038823-3038883)
chr5 (204-264)||(4736732-4736792)
chr5 (204-264)||(29302294-29302354)
chr5 (180-264)||(33833003-33833087)
chr5 (203-264)||(6436357-6436419)
chr5 (203-267)||(10950986-10951051)
chr5 (200-264)||(25912225-25912290)
chr5 (204-264)||(31752380-31752441)
chr5 (204-264)||(40234261-40234322)
chr5 (204-264)||(30486047-30486107)
chr5 (200-264)||(22701926-22701992)
chr5 (200-253)||(857855-857908)
chr5 (143-264)||(11351757-11351882)
chr5 (203-264)||(14369702-14369763)
chr5 (204-264)||(33833243-33833301)
chr5 (204-263)||(7014463-7014523)
chr5 (204-264)||(15808908-15808968)
chr5 (203-262)||(17421630-17421690)
chr5 (204-264)||(22800822-22800882)
chr5 (204-264)||(33282195-33282254)
chr5 (203-250)||(4737881-4737928)
chr5 (203-264)||(17233098-17233160)
chr5 (203-249)||(31240430-31240476)
chr5 (203-253)||(37468491-37468541)
chr5 (204-250)||(39999188-39999234)
chr5 (203-264)||(6261177-6261238)
chr5 (203-264)||(13711219-13711280)
chr5 (204-264)||(17604978-17605039)
chr5 (178-226)||(27005102-27005150)
chr5 (153-264)||(2528897-2529013)
chr5 (143-203)||(3960637-3960701)
chr5 (203-250)||(12910208-12910255)
chr5 (204-251)||(30688104-30688151)
chr5 (204-250)||(14795643-14795689)
chr5 (203-253)||(28747708-28747758)
chr5 (203-252)||(8410804-8410853)
chr5 (204-264)||(30667767-30667828)
chr5 (144-264)||(4083857-4083982)
chr5 (200-264)||(17233455-17233519)
chr5 (208-264)||(37282120-37282176)
chr5 (204-244)||(38661179-38661219)
[»] chr3 (73 HSPs)
chr3 (143-264)||(6748589-6748714)
chr3 (143-264)||(30347713-30347838)
chr3 (147-264)||(6114916-6115037)
chr3 (147-264)||(17226141-17226262)
chr3 (143-264)||(21727776-21727901)
chr3 (146-264)||(12896771-12896894)
chr3 (143-264)||(6109102-6109228)
chr3 (143-264)||(8815461-8815586)
chr3 (147-264)||(26152449-26152570)
chr3 (153-264)||(27728334-27728449)
chr3 (144-264)||(51147949-51148075)
chr3 (143-264)||(994661-994786)
chr3 (143-264)||(7848657-7848781)
chr3 (152-264)||(27800586-27800702)
chr3 (143-250)||(11460280-11460391)
chr3 (143-253)||(17065856-17065970)
chr3 (146-264)||(26152136-26152258)
chr3 (147-253)||(47461829-47461939)
chr3 (143-264)||(4043766-4043891)
chr3 (147-264)||(7521493-7521614)
chr3 (143-253)||(3269183-3269297)
chr3 (143-252)||(52654445-52654558)
chr3 (179-264)||(42856913-42856996)
chr3 (143-264)||(38798110-38798235)
chr3 (153-264)||(48649433-48649549)
chr3 (143-243)||(994988-995092)
chr3 (153-264)||(45059470-45059586)
chr3 (178-264)||(52945436-52945522)
chr3 (203-264)||(17604871-17604933)
chr3 (198-264)||(27359937-27360003)
chr3 (143-261)||(51952333-51952455)
chr3 (203-264)||(26103806-26103867)
chr3 (200-264)||(7565437-7565501)
chr3 (204-264)||(45293148-45293208)
chr3 (207-264)||(3544232-3544289)
chr3 (204-264)||(17226365-17226426)
chr3 (204-264)||(6109355-6109415)
chr3 (196-264)||(34277444-34277511)
chr3 (203-262)||(53581500-53581560)
chr3 (206-264)||(1376192-1376251)
chr3 (201-264)||(12127494-12127557)
chr3 (204-263)||(45059723-45059782)
chr3 (203-253)||(3800147-3800197)
chr3 (203-264)||(13349074-13349136)
chr3 (204-264)||(4043571-4043632)
chr3 (204-264)||(8815275-8815336)
chr3 (204-264)||(21408673-21408734)
chr3 (204-264)||(21727588-21727649)
chr3 (204-264)||(26158423-26158484)
chr3 (203-264)||(31039748-31039809)
chr3 (207-264)||(51952154-51952211)
chr3 (204-264)||(12896581-12896641)
chr3 (204-264)||(47461638-47461698)
chr3 (204-270)||(7848464-7848531)
chr3 (203-253)||(36823906-36823956)
chr3 (198-264)||(53467537-53467603)
chr3 (155-264)||(3544430-3544544)
chr3 (204-264)||(6748840-6748901)
chr3 (203-264)||(27317579-27317640)
chr3 (223-264)||(29239802-29239843)
chr3 (204-264)||(37504484-37504545)
chr3 (204-263)||(6114725-6114785)
chr3 (204-264)||(27800408-27800468)
chr3 (143-195)||(37504671-37504727)
chr3 (187-264)||(48765152-48765231)
chr3 (203-264)||(8814717-8814779)
chr3 (204-246)||(11460112-11460154)
chr3 (203-264)||(22894940-22895002)
chr3 (207-264)||(26152392-26152450)
chr3 (204-250)||(27728149-27728195)
chr3 (203-264)||(50913191-50913253)
chr3 (203-252)||(33838005-33838054)
chr3 (203-264)||(48765404-48765465)
[»] chr1 (61 HSPs)
chr1 (143-264)||(27389614-27389739)
chr1 (146-264)||(13385862-13385985)
chr1 (147-264)||(20411132-20411253)
chr1 (144-263)||(28646698-28646821)
chr1 (154-264)||(32374675-32374790)
chr1 (143-257)||(39424212-39424329)
chr1 (146-264)||(43236089-43236211)
chr1 (143-264)||(47131039-47131165)
chr1 (147-264)||(36817585-36817706)
chr1 (152-264)||(27255586-27255703)
chr1 (147-264)||(20201826-20201948)
chr1 (143-264)||(1805112-1805237)
chr1 (143-264)||(51465145-51465269)
chr1 (179-264)||(2965348-2965434)
chr1 (143-264)||(12010600-12010725)
chr1 (143-264)||(52772181-52772305)
chr1 (143-234)||(16960248-16960343)
chr1 (154-229)||(14494339-14494418)
chr1 (203-264)||(8642946-8643007)
chr1 (180-264)||(15660477-15660562)
chr1 (196-264)||(34386299-34386368)
chr1 (152-253)||(12864424-12864529)
chr1 (143-240)||(27348090-27348190)
chr1 (204-264)||(32716345-32716404)
chr1 (209-264)||(10558271-10558326)
chr1 (179-253)||(34825579-34825653)
chr1 (203-264)||(463497-463558)
chr1 (200-264)||(32374477-32374542)
chr1 (143-216)||(32716530-32716603)
chr1 (203-264)||(41146200-41146261)
chr1 (203-264)||(45818732-45818793)
chr1 (143-212)||(28094542-28094615)
chr1 (203-264)||(13157744-13157806)
chr1 (206-264)||(13385670-13385728)
chr1 (203-264)||(27787985-27788047)
chr1 (204-265)||(43236349-43236411)
chr1 (203-264)||(50559434-50559496)
chr1 (204-264)||(1804925-1804986)
chr1 (204-264)||(12864229-12864290)
chr1 (204-264)||(14494556-14494617)
chr1 (204-264)||(20411384-20411445)
chr1 (203-264)||(24770814-24770875)
chr1 (203-264)||(32994355-32994416)
chr1 (200-264)||(51431794-51431859)
chr1 (204-264)||(28094369-28094429)
chr1 (213-264)||(12705730-12705781)
chr1 (203-253)||(14387438-14387488)
chr1 (203-253)||(34515315-34515365)
chr1 (208-264)||(13943453-13943510)
chr1 (203-264)||(23413587-23413648)
chr1 (203-252)||(32155945-32155994)
chr1 (179-239)||(50797624-50797685)
chr1 (204-264)||(52772425-52772486)
chr1 (204-264)||(14387587-14387647)
chr1 (203-263)||(16005515-16005575)
chr1 (203-261)||(13264486-13264542)
chr1 (143-214)||(24190864-24190940)
chr1 (204-252)||(3979563-3979612)
chr1 (204-264)||(12010460-12010520)
chr1 (203-264)||(28454652-28454716)
chr1 (204-264)||(36817837-36817898)
[»] scaffold0068 (2 HSPs)
scaffold0068 (147-264)||(58034-58155)
scaffold0068 (204-264)||(57842-57903)
[»] scaffold0074 (2 HSPs)
scaffold0074 (147-263)||(25990-26110)
scaffold0074 (204-264)||(26241-26302)
[»] scaffold0002 (2 HSPs)
scaffold0002 (143-264)||(452304-452429)
scaffold0002 (204-264)||(452555-452615)
[»] scaffold0778 (1 HSPs)
scaffold0778 (179-264)||(6208-6294)
[»] scaffold0031 (1 HSPs)
scaffold0031 (146-253)||(82691-82802)
[»] scaffold0119 (2 HSPs)
scaffold0119 (143-258)||(2865-2984)
scaffold0119 (143-258)||(14920-15039)
[»] scaffold0069 (1 HSPs)
scaffold0069 (181-264)||(14907-14991)
[»] scaffold1259 (1 HSPs)
scaffold1259 (211-264)||(1-54)
[»] scaffold0217 (1 HSPs)
scaffold0217 (203-263)||(20805-20866)
[»] scaffold0015 (1 HSPs)
scaffold0015 (203-264)||(9918-9979)
[»] scaffold0009 (1 HSPs)
scaffold0009 (180-264)||(65898-65982)
[»] scaffold0325 (1 HSPs)
scaffold0325 (203-249)||(6504-6550)


Alignment Details
Target: chr2 (Bit Score: 86; Significance: 5e-41; HSPs: 57)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 86; E-Value: 5e-41
Query Start/End: Original strand, 143 - 265
Target Start/End: Complemental strand, 7682079 - 7681953
Alignment:
Q  143 tttttagagggtgtgttatagcaagatacaccttaa----tatttattaactttttaattataacttgctaaaacactcccagataaaaactaatggatg 238  Q
    ||||||||  |||||||||||||| |||||||||||    ||||||||||||||||| |||||||||||||||||||||||| |||||||||||||| ||    
T  7682079 tttttagaaagtgtgttatagcaacatacaccttaaggtgtatttattaactttttagttataacttgctaaaacactcccacataaaaactaatgggtg 7681980  T
Q  239 tgttctagcaaatccatatatatataa 265  Q
    |||||||||||||||||||||||||||    
T  7681979 tgttctagcaaatccatatatatataa 7681953  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 143 - 264
Target Start/End: Original strand, 3769697 - 3769823
Alignment:
Q  143 tttttagagggtgtgttatagcaagatacaccttaa----tatttattaactttttaattataacttgctaaaacactcccagataaaaactaatggatg 238  Q
    |||||||| ||||||||||||||| |||||||||||    ||||||||||| ||||| |||||||||||||||||||||||| |||||||||||||||||    
T  3769697 tttttagaaggtgtgttatagcaacatacaccttaaggtgtatttattaacattttagttataacttgctaaaacactcccacataaaaactaatggatg 3769796  T
Q  239 tgttctagcaaat-ccatatatatata 264  Q
    ||||||||||||| |||||||||||||    
T  3769797 tgttctagcaaatcccatatatatata 3769823  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 146 - 264
Target Start/End: Complemental strand, 9689446 - 9689324
Alignment:
Q  146 ttagagggtgtgttatagcaagatacaccttaa----tatttattaactttttaattataacttgctaaaacactcccagataaaaactaatggatgtgt 241  Q
    ||||| ||||||||||||||| |||||||||||    |||||||||||||||||||||||||||||||||||||||||| ||||||||||  || |||||    
T  9689446 ttagaaggtgtgttatagcaacatacaccttaaggtgtatttattaactttttaattataacttgctaaaacactcccacataaaaactagcgggtgtgt 9689347  T
Q  242 tctagcaaatccatatatatata 264  Q
    |||||||||||||||||||||||    
T  9689346 tctagcaaatccatatatatata 9689324  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 147 - 264
Target Start/End: Original strand, 38987096 - 38987217
Alignment:
Q  147 tagagggtgtgttatagcaagatacaccttaa----tatttattaactttttaattataacttgctaaaacactcccagataaaaactaatggatgtgtt 242  Q
    |||| ||||||||||||||| |||||||||||    ||||||||||||||||| |||||||||||||||||||||||| |||||||||||||| ||||||    
T  38987096 tagaaggtgtgttatagcaacatacaccttaaagtgtatttattaactttttagttataacttgctaaaacactcccacataaaaactaatgggtgtgtt 38987195  T
Q  243 ctagcaaatccatatatatata 264  Q
    |||||||| | |||||||||||    
T  38987196 ctagcaaacctatatatatata 38987217  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 73; E-Value: 3e-33
Query Start/End: Original strand, 143 - 263
Target Start/End: Original strand, 44542981 - 44543106
Alignment:
Q  143 tttttagagggtgtgttatagcaagatacaccttaa----tatttattaactttttaattataacttgctaaaacactcccagataaaaactaatggatg 238  Q
    |||||||| ||||||||||||||| |||||||||||    ||||||||||||||||| |||||||||||||||||||||||| |||||||||| ||| ||    
T  44542981 tttttagaaggtgtgttatagcaacatacaccttaaggtgtatttattaactttttagttataacttgctaaaacactcccacataaaaactagtgggtg 44543080  T
Q  239 tgttctagcaaat-ccatatatatat 263  Q
    || |||||||||| ||||||||||||    
T  44543081 tgctctagcaaatcccatatatatat 44543106  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 143 - 263
Target Start/End: Original strand, 44257592 - 44257716
Alignment:
Q  143 tttttagagggtgtgttatagcaagatacaccttaa----tatttattaactttttaattataacttgctaaaacactcccagataaaaactaatggatg 238  Q
    |||||||| | ||||||||||||| |||||||||||    ||||||||||||||||| |||||||||||||||||||||||| |||||||||| ||| ||    
T  44257592 tttttagaagatgtgttatagcaacatacaccttaaggtgtatttattaactttttagttataacttgctaaaacactcccacataaaaactagtgggtg 44257691  T
Q  239 tgttctagcaaatccatatatatat 263  Q
    |||||||| |||||| |||||||||    
T  44257692 tgttctagaaaatccctatatatat 44257716  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 143 - 264
Target Start/End: Complemental strand, 22302051 - 22301927
Alignment:
Q  143 tttttagagggtgtgttatagcaagatacaccttaa---tatttattaactttttaattataacttgctaaaacactcccagataaaaactaatggatgt 239  Q
    |||||||| ||||||||||| ||| ||||||||||    ||||||||||||||||| |||||||||||||||||||||||| ||||||| || ||| |||    
T  22302051 tttttagaaggtgtgttataacaacatacaccttaggtgtatttattaactttttagttataacttgctaaaacactcccacataaaaattagtgggtgt 22301952  T
Q  240 gttctagcaaatccatatatatata 264  Q
    || ||||||||| ||||||||||||    
T  22301951 gtactagcaaattcatatatatata 22301927  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 143 - 264
Target Start/End: Complemental strand, 30406535 - 30406409
Alignment:
Q  143 tttttagagggtgtgttatagcaagatacaccttaa----tatttattaactttttaattataacttgctaaaacactcccagataaaaactaatggatg 238  Q
    |||| ||| ||||||||||||||| |||||||||||    ||||||||||||||||| ||||||||||||||||||||| || |||||||||| ||| ||    
T  30406535 ttttaagaaggtgtgttatagcaacatacaccttaaggtgtatttattaactttttagttataacttgctaaaacactctcacataaaaactagtgggtg 30406436  T
Q  239 tgttctagcaaatc-catatatatata 264  Q
    ||||||| |||||| ||||||||||||    
T  30406435 tgttctaacaaatctcatatatatata 30406409  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 143 - 264
Target Start/End: Original strand, 33173630 - 33173756
Alignment:
Q  143 tttttagagggtgtgttatagcaagatacaccttaa----tatttattaactttttaattataacttgctaaaacactcccagataaaaactaatggatg 238  Q
    ||||| || ||||||||||||||| |||||| ||||    ||||||||||||||||| ||||||||||||| |||||||||| ||||||| || ||||||    
T  33173630 tttttggaaggtgtgttatagcaacatacacattaaggtttatttattaactttttagttataacttgctacaacactcccacataaaaattagtggatg 33173729  T
Q  239 tgttctagcaaatc-catatatatata 264  Q
    |||||||||||||| ||||||||||||    
T  33173730 tgttctagcaaatctcatatatatata 33173756  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 147 - 264
Target Start/End: Original strand, 39904791 - 39904913
Alignment:
Q  147 tagagggtgtgttatagcaagatacaccttaa----tatttattaactttttaattataacttgctaaaacactcccagataaaaactaatggatgtgtt 242  Q
    |||| ||||||||||||||| ||||| |||||    ||||||||||||||||| ||||||||||||||||||||| || |||||||||||||| ||||||    
T  39904791 tagaaggtgtgttatagcaacatacatcttaaagtgtatttattaactttttagttataacttgctaaaacactctcacataaaaactaatgggtgtgtt 39904890  T
Q  243 ctagcaaatcc-atatatatata 264  Q
    |||||||| || |||||||||||    
T  39904891 ctagcaaaccctatatatatata 39904913  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 146 - 264
Target Start/End: Complemental strand, 19630823 - 19630700
Alignment:
Q  146 ttagagggtgtgttatagcaagatacaccttaat----atttattaactttttaattataacttgctaaaacactcccagataaaaactaatggatgtgt 241  Q
    ||||| ||||||||||||||| ||| ||||||||    ||||||||| |||||| |||||||||||||||||||||||| |||||||||| ||| |||||    
T  19630823 ttagaaggtgtgttatagcaacatataccttaatgtgtatttattaattttttagttataacttgctaaaacactcccacataaaaactagtgggtgtgt 19630724  T
Q  242 tctagcaaatcc-atatatatata 264  Q
    ||||||||| || |||||||||||    
T  19630723 tctagcaaaccctatatatatata 19630700  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 146 - 264
Target Start/End: Complemental strand, 19827724 - 19827601
Alignment:
Q  146 ttagagggtgtgttatagcaagatacaccttaat----atttattaactttttaattataacttgctaaaacactcccagataaaaactaatggatgtgt 241  Q
    ||||| ||||||||||||||| ||| ||||||||    ||||||||| |||||| |||||||||||||||||||||||| |||||||||| ||| |||||    
T  19827724 ttagaaggtgtgttatagcaacatataccttaatgtgtatttattaattttttagttataacttgctaaaacactcccacataaaaactagtgggtgtgt 19827625  T
Q  242 tctagcaaatcc-atatatatata 264  Q
    ||||||||| || |||||||||||    
T  19827624 tctagcaaaccctatatatatata 19827601  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 143 - 264
Target Start/End: Original strand, 2586513 - 2586639
Alignment:
Q  143 tttttagagggtgtgttatagcaagatacaccttaa----tatttattaactttttaattataacttgctaaaacactcccagataaaaactaatggatg 238  Q
    |||||||| ||||||||||||||| |||||||||||    |||||||||  |||||| |||||||||||||||||| ||||| |||||||  ||||| ||    
T  2586513 tttttagaaggtgtgttatagcaacatacaccttaaggtgtatttattagttttttagttataacttgctaaaacaatcccacataaaaatcaatgggtg 2586612  T
Q  239 tgttctagcaaatc-catatatatata 264  Q
    |||||||||||||| ||||||||||||    
T  2586613 tgttctagcaaatctcatatatatata 2586639  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 143 - 264
Target Start/End: Complemental strand, 22711107 - 22710985
Alignment:
Q  143 tttttagagggtgtgttatagcaagatacaccttaa----tatttattaactttttaattataacttgctaaaacactcccagataaaaactaatggatg 238  Q
    |||||||| ||||||||| ||||| |||||||||||    ||||||||||||||||| |||||||||||||||||||||||| |||||||||| |||  |    
T  22711107 tttttagaaggtgtgttacagcaacatacaccttaaggtgtatttattaactttttagttataacttgctaaaacactcccacataaaaactagtgg--g 22711010  T
Q  239 tgttctagcaaatccatatatatata 264  Q
    |||||||||||||  |||||||||||    
T  22711009 tgttctagcaaat-tatatatatata 22710985  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 147 - 253
Target Start/End: Complemental strand, 39906339 - 39906229
Alignment:
Q  147 tagagggtgtgttatagcaagatacaccttaa----tatttattaactttttaattataacttgctaaaacactcccagataaaaactaatggatgtgtt 242  Q
    |||| ||||||||||||||| |||||||||||    ||||||||||||||||| |||||||||| ||||||||||||| ||||||| || ||| ||||||    
T  39906339 tagaaggtgtgttatagcaacatacaccttaaggtgtatttattaactttttagttataacttgttaaaacactcccacataaaaattagtgggtgtgtt 39906240  T
Q  243 ctagcaaatcc 253  Q
    |||||||||||    
T  39906239 ctagcaaatcc 39906229  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 59; E-Value: 7e-25
Query Start/End: Original strand, 186 - 264
Target Start/End: Complemental strand, 23175419 - 23175341
Alignment:
Q  186 taactttttaattataacttgctaaaacactcccagataaaaactaatggatgtgttctagcaaatccatatatatata 264  Q
    |||||||||| |||||||||||||||||||||||| |||||||||| ||| ||||||||||||||||| ||||||||||    
T  23175419 taactttttagttataacttgctaaaacactcccacataaaaactagtgggtgtgttctagcaaatccctatatatata 23175341  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 59; E-Value: 7e-25
Query Start/End: Original strand, 186 - 264
Target Start/End: Complemental strand, 23586676 - 23586598
Alignment:
Q  186 taactttttaattataacttgctaaaacactcccagataaaaactaatggatgtgttctagcaaatccatatatatata 264  Q
    |||||||||| |||||||||||||||||||||||| |||||||||| ||| ||||||||||||||||| ||||||||||    
T  23586676 taactttttagttataacttgctaaaacactcccacataaaaactagtgggtgtgttctagcaaatccctatatatata 23586598  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 143 - 253
Target Start/End: Complemental strand, 1297664 - 1297550
Alignment:
Q  143 tttttagagggtgtgttatagcaagatacaccttaa----tatttattaactttttaattataacttgctaaaacactcccagataaaaactaatggatg 238  Q
    |||||||| ||||||||||||||| |||||||||||    ||||||||||||||||| |||||| ||||||||||||||||  |||||||||| ||  ||    
T  1297664 tttttagaaggtgtgttatagcaacatacaccttaaggtttatttattaactttttagttataatttgctaaaacactcccgtataaaaactagtgagtg 1297565  T
Q  239 tgttctagcaaatcc 253  Q
    ||||||| |||||||    
T  1297564 tgttctatcaaatcc 1297550  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 143 - 241
Target Start/End: Complemental strand, 4293278 - 4293176
Alignment:
Q  143 tttttagagggtgtgttatagcaagatacaccttaa----tatttattaactttttaattataacttgctaaaacactcccagataaaaactaatggatg 238  Q
    ||||||||  |||||||||||||| |||||||||||    ||||||||||||||||| |||||||||||||||||||||  | |||||||||||||| ||    
T  4293278 tttttagaatgtgtgttatagcaacatacaccttaaggtgtatttattaactttttagttataacttgctaaaacactcttacataaaaactaatgggtg 4293179  T
Q  239 tgt 241  Q
    |||    
T  4293178 tgt 4293176  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 196 - 264
Target Start/End: Original strand, 3352273 - 3352342
Alignment:
Q  196 attataacttgctaaaacactcccagataaaaactaatggatgtgttctagcaaatc-catatatatata 264  Q
    ||||||||||||||||||||||||| |||||||||| ||||||| |||||||||||| ||||||||||||    
T  3352273 attataacttgctaaaacactcccacataaaaactagtggatgtattctagcaaatctcatatatatata 3352342  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 143 - 228
Target Start/End: Complemental strand, 6332350 - 6332261
Alignment:
Q  143 tttttagagggtgtgttatagcaagatacaccttaa----tatttattaactttttaattataacttgctaaaacactcccagataaaaa 228  Q
    |||||||| |||||||||||||||  ||||||||||    ||||||||||||||||| ||||||||||||||||||||| || |||||||    
T  6332350 tttttagaaggtgtgttatagcaacttacaccttaaggtgtatttattaactttttagttataacttgctaaaacactctcacataaaaa 6332261  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 153 - 253
Target Start/End: Complemental strand, 20939774 - 20939670
Alignment:
Q  153 gtgtgttatagcaagatacaccttaa----tatttattaactttttaattataacttgctaaaacactcccagataaaaactaatggatgtgttctagca 248  Q
    |||||||||||||| || || |||||    ||||||||||||||||| |||||||||||||||| ||| ||| |||||||||| ||| | ||||||||||    
T  20939774 gtgtgttatagcaacatgcatcttaaggtgtatttattaactttttagttataacttgctaaaatacttccacataaaaactagtgggtatgttctagca 20939675  T
Q  249 aatcc 253  Q
    |||||    
T  20939674 aatcc 20939670  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 204 - 253
Target Start/End: Original strand, 15554222 - 15554271
Alignment:
Q  204 ttgctaaaacactcccagataaaaactaatggatgtgttctagcaaatcc 253  Q
    ||||||||||||||||| ||||||||||||||||||||||||||||||||    
T  15554222 ttgctaaaacactcccacataaaaactaatggatgtgttctagcaaatcc 15554271  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 200 - 264
Target Start/End: Original strand, 18370412 - 18370477
Alignment:
Q  200 taacttgctaaaacactcccagataaaaactaatggatgtgttctagcaaatc-catatatatata 264  Q
    ||||||||||||||||||||| |||||||||| ||| |||||||||||||||| ||||||||||||    
T  18370412 taacttgctaaaacactcccacataaaaactagtgggtgtgttctagcaaatctcatatatatata 18370477  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 178 - 251
Target Start/End: Original strand, 41088854 - 41088927
Alignment:
Q  178 atatttattaactttttaattataacttgctaaaacactcccagataaaaactaatggatgtgttctagcaaat 251  Q
    |||||||| |||||| |||||||| |||| ||||||||||||| ||||||||||||| |||||||||| |||||    
T  41088854 atatttatcaactttctaattatatcttgttaaaacactcccatataaaaactaatgaatgtgttctaacaaat 41088927  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 203 - 264
Target Start/End: Original strand, 42850199 - 42850260
Alignment:
Q  203 cttgctaaaacactcccagataaaaactaatggatgtgttctagcaaatccatatatatata 264  Q
    |||||||||||||||||| |||||||||||||| ||| |||||||||||||| |||||||||    
T  42850199 cttgctaaaacactcccacataaaaactaatgggtgtattctagcaaatccaaatatatata 42850260  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 143 - 220
Target Start/End: Complemental strand, 15554096 - 15554015
Alignment:
Q  143 tttttagagggtgtgttatagcaagatacaccttaa----tatttattaactttttaattataacttgctaaaacactccca 220  Q
    ||||||||  ||||||||||| || |||||||||||    ||||||||||||||||| ||||||||||||||||||||||||    
T  15554096 tttttagaatgtgtgttataggaacatacaccttaagatgtatttattaactttttagttataacttgctaaaacactccca 15554015  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 204 - 264
Target Start/End: Complemental strand, 44542855 - 44542795
Alignment:
Q  204 ttgctaaaacactcccagataaaaactaatggatgtgttctagcaaatccatatatatata 264  Q
    ||||||||||||||||| |||||||||| ||| |||||||||||||| |||||||||||||    
T  44542855 ttgctaaaacactcccacataaaaactagtgggtgtgttctagcaaacccatatatatata 44542795  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 178 - 249
Target Start/End: Complemental strand, 17264964 - 17264893
Alignment:
Q  178 atatttattaactttttaattataacttgctaaaacactcccagataaaaactaatggatgtgttctagcaa 249  Q
    |||||||| ||||||||| |||||| ||||||||||||||| | |||||||||| ||| |||||||||||||    
T  17264964 atatttatcaactttttagttataatttgctaaaacactcctacataaaaactagtgggtgtgttctagcaa 17264893  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 203 - 264
Target Start/End: Original strand, 34082750 - 34082811
Alignment:
Q  203 cttgctaaaacactcccagataaaaactaatggatgtgttctagcaaatccatatatatata 264  Q
    |||||||||||||| ||| |||||||||| ||| ||||||||||||||||| ||||||||||    
T  34082750 cttgctaaaacactaccacataaaaactagtgggtgtgttctagcaaatccctatatatata 34082811  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 203 - 264
Target Start/End: Original strand, 41927562 - 41927623
Alignment:
Q  203 cttgctaaaacactcccagataaaaactaatggatgtgttctagcaaatccatatatatata 264  Q
    |||||||||||||||||| |||||||||| ||| |||||||||||||| || ||||||||||    
T  41927562 cttgctaaaacactcccacataaaaactagtgggtgtgttctagcaaacccctatatatata 41927623  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 204 - 264
Target Start/End: Complemental strand, 3769460 - 3769400
Alignment:
Q  204 ttgctaaaacactcccagataaaaactaatggatgtgttctagcaaatccatatatatata 264  Q
    |||||||| |||||||| |||||||||| ||| |||||||||||||||| |||||||||||    
T  3769460 ttgctaaagcactcccacataaaaactagtgggtgtgttctagcaaatctatatatatata 3769400  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 204 - 264
Target Start/End: Complemental strand, 33173505 - 33173445
Alignment:
Q  204 ttgctaaaacactcccagataaaaactaatggatgtgttctagcaaatccatatatatata 264  Q
    ||||||||||||||||| ||||||| || | |||||||| |||||||||||||||||||||    
T  33173505 ttgctaaaacactcccacataaaaattagtagatgtgttttagcaaatccatatatatata 33173445  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 203 - 264
Target Start/End: Complemental strand, 16513085 - 16513023
Alignment:
Q  203 cttgctaaaacactcccagataaaaactaatggatgtgttctagcaaat-ccatatatatata 264  Q
    ||||||||||||||||||  ||||||||| ||| ||||||||||||||| |||||||||||||    
T  16513085 cttgctaaaacactcccacgtaaaaactagtgggtgtgttctagcaaatcccatatatatata 16513023  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 204 - 261
Target Start/End: Original strand, 6332476 - 6332533
Alignment:
Q  204 ttgctaaaacactcccagataaaaactaatggatgtgttctagcaaatccatatatat 261  Q
    ||||||||||||||||| ||||||| || ||| |||||||||||||| ||||||||||    
T  6332476 ttgctaaaacactcccacataaaaattagtgggtgtgttctagcaaacccatatatat 6332533  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 204 - 264
Target Start/End: Original strand, 7682204 - 7682265
Alignment:
Q  204 ttgctaaaacactcccagataaaaactaatggatgtgttctagcaaatcc-atatatatata 264  Q
    ||||||||||||||||| |||||||||| |||||||||||||| ||| || |||||||||||    
T  7682204 ttgctaaaacactcccacataaaaactagtggatgtgttctagaaaaccctatatatatata 7682265  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 203 - 252
Target Start/End: Original strand, 33740137 - 33740186
Alignment:
Q  203 cttgctaaaacactcccagataaaaactaatggatgtgttctagcaaatc 252  Q
    |||||||||||||||||| |||||||||| ||| ||||||||||||||||    
T  33740137 cttgctaaaacactcccacataaaaactagtgggtgtgttctagcaaatc 33740186  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 203 - 264
Target Start/End: Original strand, 37169739 - 37169800
Alignment:
Q  203 cttgctaaaacactcccagataaaaactaatggatgtgttctagcaaatccatatatatata 264  Q
    |||| ||| ||||||||| ||||||| || ||||||||||||||||||||| ||||||||||    
T  37169739 cttgttaagacactcccacataaaaattagtggatgtgttctagcaaatccctatatatata 37169800  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 208 - 264
Target Start/End: Original strand, 9690362 - 9690418
Alignment:
Q  208 taaaacactcccagataaaaactaatggatgtgttctagcaaatccatatatatata 264  Q
    ||||| ||||||| |||||||||| ||| |||||||||||||| |||||||||||||    
T  9690362 taaaatactcccacataaaaactagtgggtgtgttctagcaaacccatatatatata 9690418  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 204 - 264
Target Start/End: Complemental strand, 23234058 - 23233998
Alignment:
Q  204 ttgctaaaacactcccagataaaaactaatggatgtgttctagcaaatccatatatatata 264  Q
    ||||||||||||||||| ||||||| || | | ||||||||| ||||||||||||||||||    
T  23234058 ttgctaaaacactcccacataaaaattagtaggtgtgttctaacaaatccatatatatata 23233998  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 204 - 264
Target Start/End: Original strand, 39906470 - 39906530
Alignment:
Q  204 ttgctaaaacactcccagataaaaactaatggatgtgttctagcaaatccatatatatata 264  Q
    ||||||||||||||||| |||||||||| ||| |||||||||||||| |  ||||||||||    
T  39906470 ttgctaaaacactcccacataaaaactagtgggtgtgttctagcaaacctctatatatata 39906530  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #42
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 203 - 249
Target Start/End: Original strand, 8386883 - 8386929
Alignment:
Q  203 cttgctaaaacactcccagataaaaactaatggatgtgttctagcaa 249  Q
    |||| ||||||||||||| |||||||||||||| |||||||||||||    
T  8386883 cttgataaaacactcccacataaaaactaatgggtgtgttctagcaa 8386929  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #43
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 214 - 264
Target Start/End: Complemental strand, 9282156 - 9282106
Alignment:
Q  214 actcccagataaaaactaatggatgtgttctagcaaatccatatatatata 264  Q
    ||||||| |||||||||| ||| |||||||||||||| |||||||||||||    
T  9282156 actcccacataaaaactagtgggtgtgttctagcaaacccatatatatata 9282106  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #44
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 210 - 264
Target Start/End: Complemental strand, 39904655 - 39904601
Alignment:
Q  210 aaacactcccagataaaaactaatggatgtgttctagcaaatccatatatatata 264  Q
    ||||||||||| |||||||||| ||| ||||||||||| ||||| ||||||||||    
T  39904655 aaacactcccacataaaaactagtgggtgtgttctagcgaatccctatatatata 39904601  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #45
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 203 - 248
Target Start/End: Complemental strand, 29512086 - 29512041
Alignment:
Q  203 cttgctaaaacactcccagataaaaactaatggatgtgttctagca 248  Q
    |||||||||||||| ||| |||||||||| ||||||||||||||||    
T  29512086 cttgctaaaacacttccacataaaaactagtggatgtgttctagca 29512041  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #46
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 204 - 264
Target Start/End: Complemental strand, 38986965 - 38986907
Alignment:
Q  204 ttgctaaaacactcccagataaaaactaatggatgtgttctagcaaatccatatatatata 264  Q
    |||||||||||||| ||  ||||||||| ||| |||||||||||||| |||||||||||||    
T  38986965 ttgctaaaacactcaca--taaaaactagtgggtgtgttctagcaaacccatatatatata 38986907  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #47
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 204 - 264
Target Start/End: Original strand, 8741695 - 8741755
Alignment:
Q  204 ttgctaaaacactcccagataaaaactaatggatgtgttctagcaaatccatatatatata 264  Q
    ||||||||||||||| | |||||||||| | | |||||| ||||||| |||||||||||||    
T  8741695 ttgctaaaacactcctacataaaaactagtaggtgtgttttagcaaaaccatatatatata 8741755  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #48
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 205 - 264
Target Start/End: Complemental strand, 13002031 - 13001971
Alignment:
Q  205 tgctaaaacactcccagataaaaactaatggatgtgttctagcaaatc-catatatatata 264  Q
    |||||||||||||||| ||||||| || | | |||||||||||||||| ||||||||||||    
T  13002031 tgctaaaacactcccacataaaaattagtcggtgtgttctagcaaatctcatatatatata 13001971  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #49
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 204 - 264
Target Start/End: Original strand, 20939910 - 20939970
Alignment:
Q  204 ttgctaaaacactcccagataaaaactaatggatgtgttctagcaaatccatatatatata 264  Q
    ||||||||||||||| | |||||||||| ||   ||||||||||||| |||||||||||||    
T  20939910 ttgctaaaacactcctacataaaaactagtgagagtgttctagcaaacccatatatatata 20939970  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #50
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 204 - 264
Target Start/End: Original strand, 30406661 - 30406721
Alignment:
Q  204 ttgctaaaacactcccagataaaaactaatggatgtgttctagcaaatccatatatatata 264  Q
    ||||||||||||||||| ||||||| || | | |||||||||||||| || ||||||||||    
T  30406661 ttgctaaaacactcccacataaaaattagtaggtgtgttctagcaaacccctatatatata 30406721  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #51
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 204 - 262
Target Start/End: Original strand, 9689576 - 9689635
Alignment:
Q  204 ttgctaaaacactcccagataaaaactaatggatgtgttctagcaaatcc-atatatata 262  Q
    ||||||||||||||||| |||||||| | |||||||||| ||||||| || |||||||||    
T  9689576 ttgctaaaacactcccacataaaaaccagtggatgtgttatagcaaacccgatatatata 9689635  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #52
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 207 - 261
Target Start/End: Complemental strand, 41527866 - 41527811
Alignment:
Q  207 ctaaaacactcccagataaaaactaatggatgtgttctagcaaat-ccatatatat 261  Q
    |||||||||||||| ||||||| || ||| ||||||||||||||| ||||||||||    
T  41527866 ctaaaacactcccacataaaaattagtgggtgtgttctagcaaatcccatatatat 41527811  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #53
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 203 - 264
Target Start/End: Complemental strand, 1750200 - 1750138
Alignment:
Q  203 cttgctaaaacactcccagataaaaactaatggatgtgttctagcaaat-ccatatatatata 264  Q
    ||||||||||||||| ||  ||||||||| ||| |||||| |||||||| |||||||||||||    
T  1750200 cttgctaaaacactctcacctaaaaactagtgggtgtgttttagcaaatcccatatatatata 1750138  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #54
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 204 - 264
Target Start/End: Complemental strand, 44257464 - 44257403
Alignment:
Q  204 ttgctaaaacactcccagataaaaactaatggatgtgttctagcaaatc-catatatatata 264  Q
    ||||||||||||||||| |||||||||||||| | | || ||||||| | ||||||||||||    
T  44257464 ttgctaaaacactcccacataaaaactaatgggtttattttagcaaacctcatatatatata 44257403  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #55
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 143 - 200
Target Start/End: Complemental strand, 9690232 - 9690171
Alignment:
Q  143 tttttagagggtgtgttatagcaagatacaccttaa----tatttattaactttttaattat 200  Q
    |||| ||| ||||||||||||||| |||||||||||    ||||||||||||||||| ||||    
T  9690232 ttttaagaaggtgtgttatagcaacatacaccttaaggtgtatttattaactttttagttat 9690171  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #56
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 222 - 261
Target Start/End: Complemental strand, 16075037 - 16074997
Alignment:
Q  222 ataaaaactaatggatgtgttctagcaaat-ccatatatat 261  Q
    |||||||||||||| ||||||||||||||| ||||||||||    
T  16075037 ataaaaactaatgggtgtgttctagcaaatcccatatatat 16074997  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #57
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 203 - 251
Target Start/End: Complemental strand, 27337097 - 27337049
Alignment:
Q  203 cttgctaaaacactcccagataaaaactaatggatgtgttctagcaaat 251  Q
    |||||||||||||||||| |||||||| | ||| ||||||||| |||||    
T  27337097 cttgctaaaacactcccacataaaaaccagtgggtgtgttctaacaaat 27337049  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 85; Significance: 2e-40; HSPs: 70)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 143 - 264
Target Start/End: Original strand, 12080835 - 12080960
Alignment:
Q  143 tttttagagggtgtgttatagcaagatacaccttaa----tatttattaactttttaattataacttgctaaaacactcccagataaaaactaatggatg 238  Q
    |||||||| ||||||||||||||| |||||||||||    ||||||||||||||||| |||||||||||||||||||||||| |||||||||| ||| ||    
T  12080835 tttttagaaggtgtgttatagcaacatacaccttaaggtgtatttattaactttttagttataacttgctaaaacactcccacataaaaactagtgggtg 12080934  T
Q  239 tgttctagcaaatccatatatatata 264  Q
    ||||||||||||||||||||||||||    
T  12080935 tgttctagcaaatccatatatatata 12080960  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 83; E-Value: 3e-39
Query Start/End: Original strand, 1 - 103
Target Start/End: Original strand, 43711728 - 43711830
Alignment:
Q  1 ggagaagcaattaaggttaccggtaataagagagacgtagctctcgaaggaggagcgaaactctcagagagaagagtgtgagagtaaggaatcaaggtct 100  Q
    |||||||||||||||||||||||||||||||||||    |||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||    
T  43711728 ggagaagcaattaaggttaccggtaataagagagatacggctctcgaaggaggagtgaaactctcagagagaagagtgtgagagtaaggaatcaaggtct 43711827  T
Q  101 ctt 103  Q
    |||    
T  43711828 ctt 43711830  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 143 - 263
Target Start/End: Original strand, 33889893 - 33890017
Alignment:
Q  143 tttttagagggtgtgttatagcaagatacaccttaat----atttattaactttttaattataacttgctaaaacactcccagataaaaactaatggatg 238  Q
    |||||||| |||| |||||||||| ||||||||||||    |||||||||||||||| |||||||||||||||||||||||| |||||||||||| ||||    
T  33889893 tttttagaaggtgcgttatagcaacatacaccttaatgtgtatttattaactttttagttataacttgctaaaacactcccacataaaaactaattgatg 33889992  T
Q  239 tgttctagcaaatccatatatatat 263  Q
    |||||||||||| ||||||||||||    
T  33889993 tgttctagcaaacccatatatatat 33890017  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 146 - 264
Target Start/End: Original strand, 11327736 - 11327859
Alignment:
Q  146 ttagagggtgtgttatagcaagatacaccttaa----tatttattaactttttaattataacttgctaaaacactcccagataaaaactaatggatgtgt 241  Q
    ||||| ||||||||||||||| |||||||||||    ||||||||||||||||| |||||||||||||||||||||||| |||||||||| ||| |||||    
T  11327736 ttagaaggtgtgttatagcaacatacaccttaaggtgtatttattaactttttagttataacttgctaaaacactcccacataaaaactagtgggtgtgt 11327835  T
Q  242 tctagcaaatc-catatatatata 264  Q
    ||||||||||| ||||||||||||    
T  11327836 tctagcaaatctcatatatatata 11327859  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 74; E-Value: 7e-34
Query Start/End: Original strand, 143 - 264
Target Start/End: Complemental strand, 8048034 - 8047908
Alignment:
Q  143 tttttagagggtgtgttatagcaagatacaccttaa----tatttattaactttttaattataacttgctaaaacactcccagataaaaactaatggatg 238  Q
    |||||| | ||||||||||||||| |||||||||||    ||||||||||||||||| |||||||||||||||||||||||| |||||||||| ||| ||    
T  8048034 tttttaaaaggtgtgttatagcaacatacaccttaaagtgtatttattaactttttagttataacttgctaaaacactcccacataaaaactagtgggtg 8047935  T
Q  239 tgttctagcaaat-ccatatatatata 264  Q
    ||||||||||||| |||||||||||||    
T  8047934 tgttctagcaaatcccatatatatata 8047908  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 74; E-Value: 7e-34
Query Start/End: Original strand, 143 - 264
Target Start/End: Original strand, 27812078 - 27812204
Alignment:
Q  143 tttttagagggtgtgttatagcaagatacaccttaa----tatttattaactttttaattataacttgctaaaacactcccagataaaaactaatggatg 238  Q
    |||||||| ||||| ||||||||| |||||||||||    ||||||||||||||||| |||||||||||||||||||||||| |||||||||| ||| ||    
T  27812078 tttttagaaggtgtattatagcaacatacaccttaaagtgtatttattaactttttagttataacttgctaaaacactcccatataaaaactagtgggtg 27812177  T
Q  239 tgttctagcaaat-ccatatatatata 264  Q
    ||||||||||||| |||||||||||||    
T  27812178 tgttctagcaaatcccatatatatata 27812204  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 74; E-Value: 7e-34
Query Start/End: Original strand, 143 - 264
Target Start/End: Original strand, 32852993 - 32853119
Alignment:
Q  143 tttttagagggtgtgttatagcaagatacaccttaa----tatttattaactttttaattataacttgctaaaacactcccagataaaaactaatggatg 238  Q
    |||||||| ||||||||||||||| |||||||||||    |||||||||||||||||||||||||||||||||||| ||||| |||||||||| ||| ||    
T  32852993 tttttagaaggtgtgttatagcaacatacaccttaaggtgtatttattaactttttaattataacttgctaaaacattcccacataaaaactagtgggtg 32853092  T
Q  239 tgttctagcaaa-tccatatatatata 264  Q
    ||||||| |||| ||||||||||||||    
T  32853093 tgttctaacaaactccatatatatata 32853119  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 73; E-Value: 3e-33
Query Start/End: Original strand, 143 - 264
Target Start/End: Original strand, 27597169 - 27597294
Alignment:
Q  143 tttttagagggtgtgttatagcaagatacaccttaa----tatttattaactttttaattataacttgctaaaacactcccagataaaaactaatggatg 238  Q
    |||||||| ||||||||||||||| |||||||||||    |||||||||||||||||||||||||||||||||||||||||| ||||| |||| ||| ||    
T  27597169 tttttagaaggtgtgttatagcaacatacaccttaaggtgtatttattaactttttaattataacttgctaaaacactcccacataaatactagtgggtg 27597268  T
Q  239 tgttctagcaaatccatatatatata 264  Q
    ||||||| ||||| | ||||||||||    
T  27597269 tgttctaacaaattcctatatatata 27597294  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 73; E-Value: 3e-33
Query Start/End: Original strand, 143 - 264
Target Start/End: Original strand, 45225530 - 45225655
Alignment:
Q  143 tttttagagggtgtgttatagcaagatacaccttaa----tatttattaactttttaattataacttgctaaaacactcccagataaaaactaatggatg 238  Q
    |||||||| |||||||||||| || |||||| ||||    ||||||||||||||||| |||||||||||||||||||||||| ||||||| || ||| ||    
T  45225530 tttttagaaggtgtgttatagtaacatacacattaaggtgtatttattaactttttagttataacttgctaaaacactcccacataaaaattagtgggtg 45225629  T
Q  239 tgttctagcaaatccatatatatata 264  Q
    ||||||||||||||||||||||||||    
T  45225630 tgttctagcaaatccatatatatata 45225655  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 71; E-Value: 5e-32
Query Start/End: Original strand, 143 - 261
Target Start/End: Complemental strand, 37138996 - 37138873
Alignment:
Q  143 tttttagagggtgtgttatagcaagatacaccttaa----tatttattaactttttaattataacttgctaaaacactcccagataaaaactaatggatg 238  Q
    |||||||| ||||||||||||||| ||| |||||||    ||||||||||||||||| |||||||||||||||||||||||| |||||||||| ||| ||    
T  37138996 tttttagaaggtgtgttatagcaacatataccttaaggtgtatttattaactttttagttataacttgctaaaacactcccacataaaaactagtgggtg 37138897  T
Q  239 tgttctagcaaat-ccatatatat 261  Q
    ||||||||||||| ||||||||||    
T  37138896 tgttctagcaaatcccatatatat 37138873  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 143 - 264
Target Start/End: Original strand, 20517057 - 20517183
Alignment:
Q  143 tttttagagggtgtgttatagcaagatacaccttaa----tatttattaactttttaattataacttgctaaaacactcccagataaaaactaatggatg 238  Q
    |||||||| ||||||||||||||| |||||||||||    ||||||||||||||||| |||||| ||||||||||||||||| ||||||| || ||| ||    
T  20517057 tttttagaaggtgtgttatagcaacatacaccttaaggtgtatttattaactttttagttataatttgctaaaacactcccacataaaaattagtgggtg 20517156  T
Q  239 tgttctagcaaat-ccatatatatata 264  Q
    ||||||||||||| |||||||||||||    
T  20517157 tgttctagcaaatcccatatatatata 20517183  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 69; E-Value: 7e-31
Query Start/End: Original strand, 152 - 264
Target Start/End: Original strand, 32577715 - 32577832
Alignment:
Q  152 ggtgtgttatagcaagatacaccttaa----tatttattaactttttaattataacttgctaaaacactcccagataaaaactaatggatgtgttctagc 247  Q
    ||||||||||||||| |||||||||||    ||||||||||||||||| |||||||||||||||||| ||||| |||||||||| ||| |||||||||||    
T  32577715 ggtgtgttatagcaacatacaccttaaggtgtatttattaactttttagttataacttgctaaaacattcccacataaaaactagtgggtgtgttctagc 32577814  T
Q  248 aaatcc-atatatatata 264  Q
    |||||| |||||||||||    
T  32577815 aaatcctatatatatata 32577832  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 143 - 264
Target Start/End: Original strand, 28605577 - 28605702
Alignment:
Q  143 tttttagagggtgtgttatagcaagatacaccttaa----tatttattaactttttaattataacttgctaaaacactcccagataaaaactaatggatg 238  Q
    |||||||| ||| ||||||||||| |||||||||||    ||||||||||| ||||| |||||||||||||||||| || |  |||||||||| ||| ||    
T  28605577 tttttagaaggtatgttatagcaacatacaccttaaggtgtatttattaacattttagttataacttgctaaaacattctctcataaaaactagtgggtg 28605676  T
Q  239 tgttctagcaaatccatatatatata 264  Q
    ||||||||||||||||||||||||||    
T  28605677 tgttctagcaaatccatatatatata 28605702  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 64; E-Value: 7e-28
Query Start/End: Original strand, 143 - 262
Target Start/End: Original strand, 18829834 - 18829958
Alignment:
Q  143 tttttagagggtgtgttatagcaagatacaccttaa----tatttattaactttttaattataacttgctaaaacactcccagataaaaactaatggatg 238  Q
    |||||||| ||||||||||||||| |||||||||||    ||||||||||||||||| |||||||||||||||||| ||||| |||||||||| ||| |     
T  18829834 tttttagaaggtgtgttatagcaacatacaccttaaggtgtatttattaactttttagttataacttgctaaaacattcccatataaaaactagtgggta 18829933  T
Q  239 tgttctagcaaat-ccatatatata 262  Q
    ||||||| ||||| |||||||||||    
T  18829934 tgttctaacaaatcccatatatata 18829958  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 64; E-Value: 7e-28
Query Start/End: Original strand, 152 - 264
Target Start/End: Original strand, 34986671 - 34986787
Alignment:
Q  152 ggtgtgttatagcaagatacaccttaa----tatttattaactttttaattataacttgctaaaacactcccagataaaaactaatggatgtgttctagc 247  Q
    ||||||||||| ||| |||||||||||    ||||||||| |||||||||||||||||||||||||||||||| |||||||||| ||| |||||||||||    
T  34986671 ggtgtgttatatcaacatacaccttaaggtgtatttattatctttttaattataacttgctaaaacactcccacataaaaactagtgggtgtgttctagc 34986770  T
Q  248 aaatccatatatatata 264  Q
    ||| ||  |||||||||    
T  34986771 aaaccccaatatatata 34986787  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 158 - 264
Target Start/End: Original strand, 4655201 - 4655312
Alignment:
Q  158 ttatagcaagatacaccttaa----tatttattaactttttaattataacttgctaaaacactcccagataaaaactaatggatgtgttctagcaaat-c 252  Q
    ||||||||| |||||||||||    ||||||||||||||||| |||||||||||||||||||||||| ||||||| || ||| ||||||||||||||| |    
T  4655201 ttatagcaacatacaccttaaggtgtatttattaactttttagttataacttgctaaaacactcccacataaaaattagtgggtgtgttctagcaaatcc 4655300  T
Q  253 catatatatata 264  Q
    ||||||||||||    
T  4655301 catatatatata 4655312  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 145 - 264
Target Start/End: Original strand, 15230203 - 15230325
Alignment:
Q  145 tttagagggtgtgttatagcaagatacaccttaa----tatttattaactttttaattataacttgctaaaacactcccagataaaaactaatggatgtg 240  Q
    |||||| ||||| ||||||||| |||||||||||    ||||||||||||||||| |||||||||||||||||||| ||| |||||||||| ||| ||||    
T  15230203 tttagaaggtgtattatagcaacatacaccttaaggtgtatttattaactttttagttataacttgctaaaacact-ccacataaaaactagtgggtgtg 15230301  T
Q  241 ttctagcaaatccatatatatata 264  Q
    |||||||||||||  |||||||||    
T  15230302 ttctagcaaatccccatatatata 15230325  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 143 - 272
Target Start/End: Original strand, 24720397 - 24720532
Alignment:
Q  143 tttttagagggtgtgttatagcaagatacaccttaa----tatttattaactttttaattataacttgctaaaacactcccagataaaaactaatggatg 238  Q
    |||||||| |||| |||||||||| |||||||| |     ||||||||||||||||| |||||||||||||||||||||||| |||||||||| ||| ||    
T  24720397 tttttagaaggtgcgttatagcaacatacacctaatggtgtatttattaactttttagttataacttgctaaaacactcccacataaaaactagtgggtg 24720496  T
Q  239 tgttctagcaaat-ccatatatatata-ataaattt 272  Q
    ||||||||||||| |||||||| |||| ||||||||    
T  24720497 tgttctagcaaatcccatatatgtatatataaattt 24720532  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 146 - 264
Target Start/End: Complemental strand, 26380133 - 26380010
Alignment:
Q  146 ttagagggtgtgttatagcaagatacaccttaa----tatttattaactttttaattataacttgctaaaacactcccagataaaaactaatggatgtgt 241  Q
    ||||| |||||||||||| || ||| |||||||    ||||||||||||||||| |||||||||| ||||||||||||| |||||||||| ||| |||||    
T  26380133 ttagaaggtgtgttatagaaacatataccttaagatgtatttattaactttttagttataacttgttaaaacactcccacataaaaactagtgggtgtgt 26380034  T
Q  242 tctagcaaat-ccatatatatata 264  Q
    |||||||||| |||||||||||||    
T  26380033 tctagcaaatcccatatatatata 26380010  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 144 - 264
Target Start/End: Complemental strand, 48454604 - 48454480
Alignment:
Q  144 ttttagagggtgtgttatagcaagatacaccttaa----tatttattaactttttaattataacttgctaaaacactcccagataaaaactaatggatgt 239  Q
    ||||||| ||||||||||| ||| ||| |||||||    ||||||||| ||||||| ||||||||| |||||||||||||| |||||||||| ||| |||    
T  48454604 ttttagaaggtgtgttatatcaacatataccttaaggtgtatttattatctttttagttataacttactaaaacactcccacataaaaactagtgggtgt 48454505  T
Q  240 gttctagcaaatccatatatatata 264  Q
    |||||| |||| |||||||||||||    
T  48454504 gttctaacaaacccatatatatata 48454480  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 59; E-Value: 7e-25
Query Start/End: Original strand, 154 - 253
Target Start/End: Original strand, 18199720 - 18199823
Alignment:
Q  154 tgtgttatagcaagatacaccttaa----tatttattaactttttaattataacttgctaaaacactcccagataaaaactaatggatgtgttctagcaa 249  Q
    ||||||||||||| |||||||||||    |||||||||||||| || |||||||||||||||||||||||| |||||||||| ||| ||||||||| |||    
T  18199720 tgtgttatagcaacatacaccttaaggtgtatttattaactttgtagttataacttgctaaaacactcccacataaaaactagtgggtgtgttctaacaa 18199819  T
Q  250 atcc 253  Q
    ||||    
T  18199820 atcc 18199823  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 59; E-Value: 7e-25
Query Start/End: Original strand, 179 - 253
Target Start/End: Original strand, 48193364 - 48193438
Alignment:
Q  179 tatttattaactttttaattataacttgctaaaacactcccagataaaaactaatggatgtgttctagcaaatcc 253  Q
    ||||||||||||||||| |||||||||||||||||||||||| |||||||||||||| | |||||||||||||||    
T  48193364 tatttattaactttttatttataacttgctaaaacactcccacataaaaactaatgggtttgttctagcaaatcc 48193438  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 143 - 260
Target Start/End: Complemental strand, 7437859 - 7437737
Alignment:
Q  143 tttttagagggtgtgttatagcaagatacaccttaat----atttattaactttttaattata-acttgctaaaacactcccagataaaaactaatggat 237  Q
    ||||| || ||||||||||||||| ||||||||||||    |||||||||||||||| ||||  |||| |||||| ||||||| |||||||||| ||| |    
T  7437859 tttttggaaggtgtgttatagcaacatacaccttaatgtgtatttattaactttttagttattcacttactaaaatactcccacataaaaactagtgggt 7437760  T
Q  238 gtgttctagcaaatccatatata 260  Q
    |||||||||||||||||||||||    
T  7437759 gtgttctagcaaatccatatata 7437737  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 143 - 264
Target Start/End: Complemental strand, 14719055 - 14718930
Alignment:
Q  143 tttttagagggtgtgttatagcaagatacaccttaa----tatttattaactttttaattataacttgctaaaacactcccagataaaaactaatggatg 238  Q
    |||||||| ||||||||||||||| ||| |||||||    ||||||||||  ||||| |||||||||||||||||||||| | |||||||||| | | |     
T  14719055 tttttagaaggtgtgttatagcaacatataccttaagatgtatttattaaaattttagttataacttgctaaaacactcctatataaaaactagtaggta 14718956  T
Q  239 tgttctagcaaatccatatatatata 264  Q
    ||||||||||||||| ||||||||||    
T  14718955 tgttctagcaaatccctatatatata 14718930  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 152 - 264
Target Start/End: Complemental strand, 18123133 - 18123016
Alignment:
Q  152 ggtgtgttatagcaagatacaccttaa----tatttattaactttttaattataacttgctaaaacactcccagataaaaactaatggatgtgttctagc 247  Q
    ||||||||||||||| |||||||||||    |||||||||||||||||||||||| ||| ||||||||||||| ||| ||| || | | |||||||||||    
T  18123133 ggtgtgttatagcaacatacaccttaaggtgtatttattaactttttaattataatttggtaaaacactcccacatagaaattagtaggtgtgttctagc 18123034  T
Q  248 aaat-ccatatatatata 264  Q
    |||| |||||||||||||    
T  18123033 aaatcccatatatatata 18123016  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 143 - 228
Target Start/End: Complemental strand, 38876228 - 38876139
Alignment:
Q  143 tttttagagggtgtgttatagcaagatacaccttaa----tatttattaactttttaattataacttgctaaaacactcccagataaaaa 228  Q
    |||||||| ||||||||||||||| |||||||||||    ||||||||||||||||| |||||||||||||||||||||||| |||||||    
T  38876228 tttttagaaggtgtgttatagcaacatacaccttaaggtgtatttattaactttttagttataacttgctaaaacactcccacataaaaa 38876139  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 143 - 260
Target Start/End: Original strand, 14770211 - 14770333
Alignment:
Q  143 tttttagagggtgtgttatagcaagatacaccttaa----tatttattaactttttaattataacttgctaaaacactcccagataaaaactaatggatg 238  Q
    |||||||| |||||||||||| || |||||||||||    || |||||||||||||| ||||||||||||||||||||| || |||||||| ||||| ||    
T  14770211 tttttagaaggtgtgttatagaaacatacaccttaaggtgtacttattaactttttagttataacttgctaaaacactctcatataaaaaccaatgggtg 14770310  T
Q  239 tgttctagcaaatc-catatata 260  Q
    |||| || |||||| ||||||||    
T  14770311 tgttataacaaatctcatatata 14770333  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 143 - 260
Target Start/End: Original strand, 15220662 - 15220784
Alignment:
Q  143 tttttagagggtgtgttatagcaagatacaccttaa----tatttattaactttttaattataacttgctaaaacactcccagataaaaactaatggatg 238  Q
    |||||||| |||||||||||| || |||||||||||    || |||||||||||||| ||||||||||||||||||||| || |||||||| ||||| ||    
T  15220662 tttttagaaggtgtgttatagaaacatacaccttaaggtgtacttattaactttttagttataacttgctaaaacactctcatataaaaaccaatgggtg 15220761  T
Q  239 tgttctagcaaatc-catatata 260  Q
    |||| || |||||| ||||||||    
T  15220762 tgttataacaaatctcatatata 15220784  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 159 - 253
Target Start/End: Original strand, 22479358 - 22479456
Alignment:
Q  159 tatagcaagatacaccttaa----tatttattaactttttaattataacttgctaaaacactcccagataaaaactaatggatgtgttctagcaaatcc 253  Q
    |||||||| |||||||||||    ||||||||||||||||| |||||||||| |||||||| |||| |||||||||| ||| |||||||||||||||||    
T  22479358 tatagcaacatacaccttaaggtgtatttattaactttttagttataacttgttaaaacacacccacataaaaactagtgggtgtgttctagcaaatcc 22479456  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 200 - 264
Target Start/End: Original strand, 38368037 - 38368101
Alignment:
Q  200 taacttgctaaaacactcccagataaaaactaatggatgtgttctagcaaatccatatatatata 264  Q
    ||||||||||||||||||||| |||||||||| ||| ||||||||||||||||||||||||||||    
T  38368037 taacttgctaaaacactcccacataaaaactagtgggtgtgttctagcaaatccatatatatata 38368101  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 143 - 264
Target Start/End: Original strand, 43712049 - 43712177
Alignment:
Q  143 tttttagagggtgtgttatagcaagatacacctta----atatttattaa-ctttttaattataacttgct-aaaacactcccagataaaaactaatgga 236  Q
    |||||||| ||||||||||||||| ||||||||||    |||||||||||  ||||||||||||||||||| ||||||||||||  ||||| | | ||||    
T  43712049 tttttagaaggtgtgttatagcaacatacaccttaaactatatttattaatttttttaattataacttgctaaaaacactcccacctaaaagccagtgga 43712148  T
Q  237 tgtgttctagcaaatcc-atatatatata 264  Q
    |||||||||| |||||| |||||||||||    
T  43712149 tgtgttctagtaaatcctatatatatata 43712177  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 203 - 264
Target Start/End: Complemental strand, 41037370 - 41037309
Alignment:
Q  203 cttgctaaaacactcccagataaaaactaatggatgtgttctagcaaatccatatatatata 264  Q
    |||||||||||| ||||| |||||||||| ||||||||||||||||||||||||||||||||    
T  41037370 cttgctaaaacattcccacataaaaactagtggatgtgttctagcaaatccatatatatata 41037309  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 204 - 264
Target Start/End: Original strand, 26380263 - 26380323
Alignment:
Q  204 ttgctaaaacactcccagataaaaactaatggatgtgttctagcaaatccatatatatata 264  Q
    ||||||||||||||||| ||||||||||||||||||||||||  |||||||||||||||||    
T  26380263 ttgctaaaacactcccacataaaaactaatggatgtgttctaataaatccatatatatata 26380323  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 204 - 264
Target Start/End: Complemental strand, 4655055 - 4654995
Alignment:
Q  204 ttgctaaaacactcccagataaaaactaatggatgtgttctagcaaatccatatatatata 264  Q
    ||||||||||||||||| |||||||||| ||| |||||||||||||| |||||||||||||    
T  4655055 ttgctaaaacactcccacataaaaactagtgggtgtgttctagcaaacccatatatatata 4654995  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 200 - 264
Target Start/End: Original strand, 38797006 - 38797070
Alignment:
Q  200 taacttgctaaaacactcccagataaaaactaatggatgtgttctagcaaatccatatatatata 264  Q
    ||||||||||||||||| ||| |||||||| | ||| ||||||||||||||||||||||||||||    
T  38797006 taacttgctaaaacacttccacataaaaacaagtgggtgtgttctagcaaatccatatatatata 38797070  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 204 - 264
Target Start/End: Complemental strand, 45225270 - 45225210
Alignment:
Q  204 ttgctaaaacactcccagataaaaactaatggatgtgttctagcaaatccatatatatata 264  Q
    ||||||||||||||||| |||||||||| ||| |||||||||||||| |||||||||||||    
T  45225270 ttgctaaaacactcccacataaaaactagtgggtgtgttctagcaaacccatatatatata 45225210  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 203 - 264
Target Start/End: Complemental strand, 938907 - 938845
Alignment:
Q  203 cttgctaaaacactcccagataaaaactaatggatgtgttctagcaaat-ccatatatatata 264  Q
    |||||||||||||||||| |||||||||| ||| ||||||||||||||| |||||||||||||    
T  938907 cttgctaaaacactcccacataaaaactagtgggtgtgttctagcaaatcccatatatatata 938845  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 203 - 264
Target Start/End: Complemental strand, 25818496 - 25818434
Alignment:
Q  203 cttgctaaaacactcccagataaaaactaatggatgtgttctagcaaatc-catatatatata 264  Q
    |||||||||||||||||| |||||||||| ||| |||||||||||||||| ||||||||||||    
T  25818496 cttgctaaaacactcccacataaaaactagtgggtgtgttctagcaaatctcatatatatata 25818434  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 200 - 264
Target Start/End: Complemental strand, 2936655 - 2936590
Alignment:
Q  200 taacttgctaaaacactcccagataaaaactaatggatgtgttctagcaaatc-catatatatata 264  Q
    ||||||||||||||||||  | |||||||||||||| |||||||||||||||| ||||||||||||    
T  2936655 taacttgctaaaacactcaaacataaaaactaatgggtgtgttctagcaaatctcatatatatata 2936590  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 203 - 264
Target Start/End: Complemental strand, 6559369 - 6559308
Alignment:
Q  203 cttgctaaaacactcccagataaaaactaatggatgtgttctagcaaatccatatatatata 264  Q
    |||||||||||||||||| || ||||||| ||| |||||||||||||||| |||||||||||    
T  6559369 cttgctaaaacactcccacatcaaaactagtgggtgtgttctagcaaatctatatatatata 6559308  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 204 - 264
Target Start/End: Original strand, 48454732 - 48454793
Alignment:
Q  204 ttgctaaaacactcccagataaaaactaatggatgtgttctagcaaat-ccatatatatata 264  Q
    ||||||||||||||||| |||||||||| ||| ||||||||||||||| |||||||||||||    
T  48454732 ttgctaaaacactcccacataaaaactagtgggtgtgttctagcaaatcccatatatatata 48454793  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 145 - 242
Target Start/End: Original strand, 14778065 - 14778164
Alignment:
Q  145 tttagagggtgtgttatagcaagatacaccttaa----tatttattaactttttaattataacttgctaaaacactcccagataaaaactaatggatgtg 240  Q
    |||||| ||||| ||||||||| |||||||||||    ||||||||||||||| | |||||||||||||||||||| ||| |||||||||| ||| ||||    
T  14778065 tttagaaggtgtattatagcaacatacaccttaaggtgtatttattaactttt-agttataacttgctaaaacact-ccacataaaaactagtgggtgtg 14778162  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 204 - 264
Target Start/End: Original strand, 18123260 - 18123320
Alignment:
Q  204 ttgctaaaacactcccagataaaaactaatggatgtgttctagcaaatccatatatatata 264  Q
    ||||||||||||||||| |||||||||||| | ||||||||||| || |||||||||||||    
T  18123260 ttgctaaaacactcccacataaaaactaattggtgtgttctagcgaacccatatatatata 18123320  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 204 - 264
Target Start/End: Complemental strand, 32577515 - 32577455
Alignment:
Q  204 ttgctaaaacactcccagataaaaactaatggatgtgttctagcaaatccatatatatata 264  Q
    ||||||||||||||||| ||||||| || ||| |||||||||||||| |||||||||||||    
T  32577515 ttgctaaaacactcccatataaaaattagtgggtgtgttctagcaaacccatatatatata 32577455  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 204 - 264
Target Start/End: Complemental strand, 34986536 - 34986476
Alignment:
Q  204 ttgctaaaacactcccagataaaaactaatggatgtgttctagcaaatccatatatatata 264  Q
    |||||||||||||| || |||||||||| ||| |||||||||||||||| |||||||||||    
T  34986536 ttgctaaaacactctcacataaaaactagtgggtgtgttctagcaaatctatatatatata 34986476  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 203 - 264
Target Start/End: Complemental strand, 41407354 - 41407292
Alignment:
Q  203 cttgctaaaacactcccagataaaaactaatggatgtgttctagcaaatc-catatatatata 264  Q
    |||||||||||||||||| |||||||||||| | |||||||||||||| | ||||||||||||    
T  41407354 cttgctaaaacactcccacataaaaactaataggtgtgttctagcaaacctcatatatatata 41407292  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #47
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 203 - 264
Target Start/End: Original strand, 2509504 - 2509564
Alignment:
Q  203 cttgctaaaacactcccagataaaaactaatggatgtgttctagcaaatccatatatatata 264  Q
    |||||||||||||||||| || ||||||| |||||||||||||||||||  |||||||||||    
T  2509504 cttgctaaaacactcccacatcaaaactagtggatgtgttctagcaaat-aatatatatata 2509564  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #48
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 207 - 264
Target Start/End: Original strand, 6736699 - 6736756
Alignment:
Q  207 ctaaaacactcccagataaaaactaatggatgtgttctagcaaatccatatatatata 264  Q
    |||||||||||||| |||||||||| ||| || ||||||| |||||||||||||||||    
T  6736699 ctaaaacactcccacataaaaactagtgggtgcgttctagtaaatccatatatatata 6736756  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #49
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 186 - 251
Target Start/End: Original strand, 17327168 - 17327233
Alignment:
Q  186 taactttttaattataacttgctaaaacactcccagataaaaactaatggatgtgttctagcaaat 251  Q
    |||||||||| |||||||||||||||| ||||||| ||||||||   ||| |||||||||||||||    
T  17327168 taactttttagttataacttgctaaaatactcccacataaaaacggttgggtgtgttctagcaaat 17327233  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #50
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 203 - 264
Target Start/End: Complemental strand, 23740058 - 23739997
Alignment:
Q  203 cttgctaaaacactcccagataaaaactaatggatgtgttctagcaaatccatatatatata 264  Q
    |||||||||||||| ||| |||||||||| ||| || | |||||||||||||||||||||||    
T  23740058 cttgctaaaacacttccacataaaaactagtgggtgcgatctagcaaatccatatatatata 23739997  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #51
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 204 - 264
Target Start/End: Complemental strand, 27811952 - 27811891
Alignment:
Q  204 ttgctaaaacactcccagataaaaactaatggatgtgttctagcaaatcc-atatatatata 264  Q
    ||||||||||||||||| |||||||||| ||| |||||||||||||| || |||||||||||    
T  27811952 ttgctaaaacactcccacataaaaactagtgggtgtgttctagcaaaccctatatatatata 27811891  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #52
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 203 - 263
Target Start/End: Complemental strand, 454116 - 454056
Alignment:
Q  203 cttgctaaaacactcccagataaaaactaatggatgtgttctagcaaatccatatatatat 263  Q
    |||||||||||||||| | ||||||| || ||| ||||||||||||||||| |||||||||    
T  454116 cttgctaaaacactcctacataaaaaatagtgggtgtgttctagcaaatccttatatatat 454056  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #53
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 204 - 264
Target Start/End: Original strand, 8048156 - 8048216
Alignment:
Q  204 ttgctaaaacactcccagataaaaactaatggatgtgttctagcaaatccatatatatata 264  Q
    ||||||||||||||||| ||||||| || ||| ||||||||||| || |||||||||||||    
T  8048156 ttgctaaaacactcccacataaaaattagtgggtgtgttctagcgaacccatatatatata 8048216  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #54
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 203 - 261
Target Start/End: Original strand, 27168437 - 27168496
Alignment:
Q  203 cttgctaaaacactcccagataaaaactaatggatgtgttctagcaaat-ccatatatat 261  Q
    ||||||||||||||| || |||||||||| ||| ||||||||||||||| ||||||||||    
T  27168437 cttgctaaaacactcacacataaaaactagtgggtgtgttctagcaaatcccatatatat 27168496  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #55
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 204 - 250
Target Start/End: Complemental strand, 18199578 - 18199532
Alignment:
Q  204 ttgctaaaacactcccagataaaaactaatggatgtgttctagcaaa 250  Q
    ||||||||||||||||| |||||||||| ||| ||||||||||||||    
T  18199578 ttgctaaaacactcccacataaaaactagtgggtgtgttctagcaaa 18199532  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #56
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 204 - 264
Target Start/End: Original strand, 14719180 - 14719241
Alignment:
Q  204 ttgctaaaacactcccagataaaaactaatggatgtgttctagcaaa-tccatatatatata 264  Q
    ||||||||| ||||||| |||||||||| ||| ||||||||||||||  |||||||||||||    
T  14719180 ttgctaaaagactcccacataaaaactagtgggtgtgttctagcaaaccccatatatatata 14719241  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #57
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 203 - 264
Target Start/End: Complemental strand, 19069408 - 19069347
Alignment:
Q  203 cttgctaaaacactcccagataaaaactaatggatgtgttctagcaaatccatatatatata 264  Q
    |||||||||||||||  | |||||||||| ||| ||||||||||||||| || |||||||||    
T  19069408 cttgctaaaacactcttacataaaaactagtgggtgtgttctagcaaattcaaatatatata 19069347  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #58
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 254 - 287
Target Start/End: Complemental strand, 31029406 - 31029373
Alignment:
Q  254 atatatatataataaatttcttcttttacaatct 287  Q
    ||||||||||||||||||||||||||||||||||    
T  31029406 atatatatataataaatttcttcttttacaatct 31029373  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #59
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 204 - 264
Target Start/End: Complemental strand, 20516930 - 20516870
Alignment:
Q  204 ttgctaaaacactcccagataaaaactaatggatgtgttctagcaaatccatatatatata 264  Q
    ||||||||||||||||| ||||||| || ||| ||||||||| |||| || ||||||||||    
T  20516930 ttgctaaaacactcccacataaaaattagtgggtgtgttctaacaaacccctatatatata 20516870  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #60
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 204 - 264
Target Start/End: Complemental strand, 24720271 - 24720211
Alignment:
Q  204 ttgctaaaacactcccagataaaaactaatggatgtgttctagcaaatccatatatatata 264  Q
    ||||||||||||||| | ||||||| || ||| |||||||||| ||| |||||||||||||    
T  24720271 ttgctaaaacactcctacataaaaattagtgggtgtgttctagaaaacccatatatatata 24720211  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #61
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 143 - 264
Target Start/End: Complemental strand, 27168315 - 27168194
Alignment:
Q  143 tttttagagggtgtgttatagcaagatacaccttaa----tatttattaactttttaattataacttgctaaaacactcccagataaaaactaatggatg 238  Q
    |||||||| |||||||| |||||| || ||||||||    ||||||  ||||||||||||||    ||||||||||| ||   |||||||||| ||||||    
T  27168315 tttttagaaggtgtgttttagcaacattcaccttaaggtgtatttaagaactttttaattat----tgctaaaacacaccttaataaaaactagtggatg 27168220  T
Q  239 tgttctagcaaatccatatatatata 264  Q
    | | ||| |||| |||||||||||||    
T  27168219 tatcctaacaaacccatatatatata 27168194  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #62
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 204 - 262
Target Start/End: Complemental strand, 33889092 - 33889033
Alignment:
Q  204 ttgctaaaacactcccagataaaaactaatggatgtgttctagcaaa-tccatatatata 262  Q
    ||||||||||||||| | |||||||||| ||| ||||||||||||||  |||||||||||    
T  33889092 ttgctaaaacactccgacataaaaactagtgggtgtgttctagcaaaccccatatatata 33889033  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #63
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 198 - 232
Target Start/End: Complemental strand, 2362769 - 2362735
Alignment:
Q  198 tataacttgctaaaacactcccagataaaaactaa 232  Q
    ||||||||||||||||||||||| |||||||||||    
T  2362769 tataacttgctaaaacactcccacataaaaactaa 2362735  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #64
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 326 - 360
Target Start/End: Complemental strand, 31029368 - 31029334
Alignment:
Q  326 gtttaaaggatttaaacttcttaccatttaaatca 360  Q
    ||||||||||||||||||||||||| |||||||||    
T  31029368 gtttaaaggatttaaacttcttaccttttaaatca 31029334  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #65
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 204 - 264
Target Start/End: Original strand, 7437986 - 7438047
Alignment:
Q  204 ttgctaaaacactcccagataaaaactaatggatgtgttctagcaaatcc-atatatatata 264  Q
    ||||||||||||||||| |||||||  | ||||||||||||| |||| || |||||||||||    
T  7437986 ttgctaaaacactcccacataaaaatgagtggatgtgttctaacaaaccctatatatatata 7438047  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #66
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 203 - 264
Target Start/End: Complemental strand, 11766134 - 11766074
Alignment:
Q  203 cttgctaaaacactcccagataaaaactaatggatgtgttctagcaaatccatatatatata 264  Q
    |||||||||||||||| | ||||||| || ||| |||||||||||||||||  |||||||||    
T  11766134 cttgctaaaacactcc-acataaaaattagtgggtgtgttctagcaaatccccatatatata 11766074  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #67
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 207 - 264
Target Start/End: Complemental strand, 28605449 - 28605394
Alignment:
Q  207 ctaaaacactcccagataaaaactaatggatgtgttctagcaaatccatatatatata 264  Q
    ||||| |||||||| |||||||||| ||| ||||||||||||||| ||||||||||||    
T  28605449 ctaaagcactcccacataaaaactagtgg-tgtgttctagcaaat-catatatatata 28605394  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #68
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 204 - 248
Target Start/End: Complemental strand, 14770084 - 14770040
Alignment:
Q  204 ttgctaaaacactcccagataaaaactaatggatgtgttctagca 248  Q
    ||||||||| ||||||| |||||||||| ||| ||||||||||||    
T  14770084 ttgctaaaatactcccacataaaaactagtgggtgtgttctagca 14770040  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #69
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 204 - 248
Target Start/End: Complemental strand, 15220535 - 15220491
Alignment:
Q  204 ttgctaaaacactcccagataaaaactaatggatgtgttctagca 248  Q
    ||||||||| ||||||| |||||||||| ||| ||||||||||||    
T  15220535 ttgctaaaatactcccacataaaaactagtgggtgtgttctagca 15220491  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #70
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 203 - 261
Target Start/End: Original strand, 18352500 - 18352557
Alignment:
Q  203 cttgctaaaacactcccagataaaaactaatggatgtgttctagcaaat-ccatatatat 261  Q
    |||| ||||||||||||| |||||||||| |||  |||||||||||||| ||||||||||    
T  18352500 cttgttaaaacactcccacataaaaactagtgg--gtgttctagcaaatcccatatatat 18352557  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 85; Significance: 2e-40; HSPs: 82)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 143 - 264
Target Start/End: Complemental strand, 10216314 - 10216189
Alignment:
Q  143 tttttagagggtgtgttatagcaagatacaccttaa----tatttattaactttttaattataacttgctaaaacactcccagataaaaactaatggatg 238  Q
    |||||||| ||||||||||||||| |||||||||||    ||||||||||||||||| |||||||||||||||||||||||| |||||||||| | ||||    
T  10216314 tttttagaaggtgtgttatagcaacatacaccttaaggtgtatttattaactttttagttataacttgctaaaacactcccacataaaaactagttgatg 10216215  T
Q  239 tgttctagcaaatccatatatatata 264  Q
    ||||||||||||||||||||||||||    
T  10216214 tgttctagcaaatccatatatatata 10216189  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 83; E-Value: 3e-39
Query Start/End: Original strand, 146 - 264
Target Start/End: Original strand, 7630216 - 7630339
Alignment:
Q  146 ttagagggtgtgttatagcaagatacaccttaa----tatttattaactttttaattataacttgctaaaacactcccagataaaaactaatggatgtgt 241  Q
    ||||| ||||||||||||||| |||||||||||    |||||||||||||||||||||||||||||||||||||||||| |||||||||||||| |||||    
T  7630216 ttagaaggtgtgttatagcaatatacaccttaaggtgtatttattaactttttaattataacttgctaaaacactcccacataaaaactaatgggtgtgt 7630315  T
Q  242 tctagcaaat-ccatatatatata 264  Q
    |||||||||| |||||||||||||    
T  7630316 tctagcaaatcccatatatatata 7630339  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 146 - 264
Target Start/End: Complemental strand, 42807970 - 42807848
Alignment:
Q  146 ttagagggtgtgttatagcaagatacaccttaa----tatttattaactttttaattataacttgctaaaacactcccagataaaaactaatggatgtgt 241  Q
    ||||| ||||||||||||||| |||||||||||    ||||||||||||||||| |||||||||||||||||||||||| |||||||||| ||| |||||    
T  42807970 ttagaaggtgtgttatagcaacatacaccttaaggtgtatttattaactttttagttataacttgctaaaacactcccacataaaaactagtgggtgtgt 42807871  T
Q  242 tctagcaaatccatatatatata 264  Q
    |||||||||||||||||||||||    
T  42807870 tctagcaaatccatatatatata 42807848  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 78; E-Value: 3e-36
Query Start/End: Original strand, 143 - 264
Target Start/End: Original strand, 5157153 - 5157279
Alignment:
Q  143 tttttagagggtgtgttatagcaagatacaccttaa----tatttattaactttttaattataacttgctaaaacactcccagataaaaactaatggatg 238  Q
    |||||||| ||||||||||||||| |||||||||||    |||||||||| |||||| |||||||||||||||||||||||| |||||||||| ||||||    
T  5157153 tttttagaaggtgtgttatagcaacatacaccttaaggtgtatttattaattttttagttataacttgctaaaacactcccacataaaaactagtggatg 5157252  T
Q  239 tgttctagcaaat-ccatatatatata 264  Q
    ||||||||||||| |||||||||||||    
T  5157253 tgttctagcaaatcccatatatatata 5157279  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 143 - 264
Target Start/End: Complemental strand, 5046703 - 5046578
Alignment:
Q  143 tttttagagggtgtgttatagcaagatacaccttaa----tatttattaactttttaattataacttgctaaaacactcccagataaaaactaatggatg 238  Q
    |||||||| ||||||||||||||| |||||| ||||    ||||||||||||||||| |||||||||||||||||||||||| |||||||||| ||| ||    
T  5046703 tttttagaaggtgtgttatagcaacatacactttaaggtgtatttattaactttttagttataacttgctaaaacactcccacataaaaactagtgggtg 5046604  T
Q  239 tgttctagcaaatccatatatatata 264  Q
    |||||||||||||| |||||||||||    
T  5046603 tgttctagcaaatctatatatatata 5046578  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 76; E-Value: 5e-35
Query Start/End: Original strand, 155 - 263
Target Start/End: Complemental strand, 30258177 - 30258065
Alignment:
Q  155 gtgttatagcaagatacaccttaa----tatttattaactttttaattataacttgctaaaacactcccagataaaaactaatggatgtgttctagcaaa 250  Q
    |||||||||||| |||||||||||    ||||||||||||||||| |||||||||||||||||||||||| |||||||||| ||| ||||||||||||||    
T  30258177 gtgttatagcaacatacaccttaaggtgtatttattaactttttagttataacttgctaaaacactcccacataaaaactagtgggtgtgttctagcaaa 30258078  T
Q  251 tccatatatatat 263  Q
    |||||||||||||    
T  30258077 tccatatatatat 30258065  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 74; E-Value: 7e-34
Query Start/End: Original strand, 143 - 253
Target Start/End: Original strand, 13621253 - 13621367
Alignment:
Q  143 tttttagagggtgtgttatagcaagatacaccttaa----tatttattaactttttaattataacttgctaaaacactcccagataaaaactaatggatg 238  Q
    |||||||| ||||||||||||||| |||||||||||    ||||||||||||||||| |||||||||||||||||||||||| |||||||||| ||| ||    
T  13621253 tttttagaaggtgtgttatagcaacatacaccttaaggagtatttattaactttttagttataacttgctaaaacactcccacataaaaactagtgggtg 13621352  T
Q  239 tgttctagcaaatcc 253  Q
    |||||||||||||||    
T  13621353 tgttctagcaaatcc 13621367  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 74; E-Value: 7e-34
Query Start/End: Original strand, 143 - 264
Target Start/End: Original strand, 41172565 - 41172691
Alignment:
Q  143 tttttagagggtgtgttatagcaagatacaccttaa----tatttattaactttttaattataacttgctaaaacactcccagataaaaactaatggatg 238  Q
    |||||||| ||||||||||||||| |||||||||||    ||||||||||||||||| ||||| |||||||||||||||||| |||||||||| ||| ||    
T  41172565 tttttagaaggtgtgttatagcaacatacaccttaaaatgtatttattaactttttagttatatcttgctaaaacactcccacataaaaactagtgggtg 41172664  T
Q  239 tgttctagcaaat-ccatatatatata 264  Q
    ||||||||||||| |||||||||||||    
T  41172665 tgttctagcaaatcccatatatatata 41172691  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 143 - 264
Target Start/End: Complemental strand, 12584348 - 12584222
Alignment:
Q  143 tttttagagggtgtgttatagcaagatacaccttaa----tatttattaactttttaattataacttgctaaaacactcccagataaaaactaatggatg 238  Q
    |||||||| ||||||||||||||| |||||||||||    ||||||||||||||||| |||||||||| |||||||||||||  ||||||||| ||| ||    
T  12584348 tttttagaaggtgtgttatagcaacatacaccttaaagtgtatttattaactttttagttataacttgttaaaacactcccacgtaaaaactagtgggtg 12584249  T
Q  239 tgttctagcaaatc-catatatatata 264  Q
    |||||||||||||| ||||||||||||    
T  12584248 tgttctagcaaatctcatatatatata 12584222  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 146 - 263
Target Start/End: Complemental strand, 34683107 - 34682985
Alignment:
Q  146 ttagagggtgtgttatagcaagatacaccttaa----tatttattaactttttaattataacttgctaaaacactcccagataaaaactaatggatgtgt 241  Q
    ||||| ||||||||||||||| |||||||||||    ||||| ||||||||||| |||||||||||||||||||||||| |||||||||| ||| |||||    
T  34683107 ttagaaggtgtgttatagcaacatacaccttaagctgtatttgttaactttttagttataacttgctaaaacactcccacataaaaactagtgggtgtgt 34683008  T
Q  242 tctagcaaat-ccatatatatat 263  Q
    |||||||||| ||||||||||||    
T  34683007 tctagcaaatcccatatatatat 34682985  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 69; E-Value: 7e-31
Query Start/End: Original strand, 143 - 264
Target Start/End: Complemental strand, 14202932 - 14202807
Alignment:
Q  143 tttttagagggtgtgttatagcaagatacaccttaa----tatttattaactttttaattataacttgctaaaacactcccagataaaaactaatggatg 238  Q
    |||||||| ||||||||||||||| ||||| |||||    ||||||||||||||||| |||||||| ||||||||||||||| ||||||| || ||| ||    
T  14202932 tttttagaaggtgtgttatagcaacatacatcttaaggtgtatttattaactttttagttataactcgctaaaacactcccacataaaaattagtgggtg 14202833  T
Q  239 tgttctagcaaatccatatatatata 264  Q
    ||||||||||||||| ||||||||||    
T  14202832 tgttctagcaaatccttatatatata 14202807  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 69; E-Value: 7e-31
Query Start/End: Original strand, 146 - 263
Target Start/End: Original strand, 17377652 - 17377773
Alignment:
Q  146 ttagagggtgtgttatagcaagatacaccttaa----tatttattaactttttaattataacttgctaaaacactcccagataaaaactaatggatgtgt 241  Q
    ||||| ||||||||||||||| |||||| ||||    ||||||||||||||||| |||||||||||||||||||||||| |||||||||| |||||||||    
T  17377652 ttagaaggtgtgttatagcaacatacactttaaggtgtatttattaactttttagttataacttgctaaaacactcccacataaaaactagtggatgtgt 17377751  T
Q  242 tctagcaaatccatatatatat 263  Q
    ||||||| ||  ||||||||||    
T  17377752 tctagcatatatatatatatat 17377773  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 69; E-Value: 7e-31
Query Start/End: Original strand, 143 - 264
Target Start/End: Original strand, 17745301 - 17745426
Alignment:
Q  143 tttttagagggtgtgttatagcaagatacaccttaa----tatttattaactttttaattataacttgctaaaacactcccagataaaaactaatggatg 238  Q
    |||||||| ||||||||||||||| |||||||| ||    ||||||||||||||||| |||||||||||||||||||||||| |||||||||| ||  ||    
T  17745301 tttttagaaggtgtgttatagcaacatacacctgaaggtgtatttattaactttttagttataacttgctaaaacactcccacataaaaactagtgagtg 17745400  T
Q  239 tgttctagcaaatccatatatatata 264  Q
    |||||||||||||  |||||||||||    
T  17745401 tgttctagcaaatatatatatatata 17745426  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 69; E-Value: 7e-31
Query Start/End: Original strand, 143 - 264
Target Start/End: Original strand, 21519887 - 21520012
Alignment:
Q  143 tttttagagggtgtgttatagcaagatacaccttaa----tatttattaactttttaattataacttgctaaaacactcccagataaaaactaatggatg 238  Q
    |||||| | ||||||||||||||| ||| |||||||    ||||||||||||||||| |||||||||||||||||||||||| |||||||||| ||| ||    
T  21519887 tttttaaaaggtgtgttatagcaacatataccttaaggtgtatttattaactttttagttataacttgctaaaacactcccacataaaaactagtgggtg 21519986  T
Q  239 tgttctagcaaatccatatatatata 264  Q
    |||||||||||| | |||||||||||    
T  21519987 tgttctagcaaaactatatatatata 21520012  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 69; E-Value: 7e-31
Query Start/End: Original strand, 143 - 264
Target Start/End: Original strand, 48560153 - 48560278
Alignment:
Q  143 tttttagagggtgtgttatagcaagatacaccttaa----tatttattaactttttaattataacttgctaaaacactcccagataaaaactaatggatg 238  Q
    |||||||| ||||||||| | ||| |||||||||||    ||||||||||||||||| ||||||||| |||||||||||||| |||||||||| ||| ||    
T  48560153 tttttagaaggtgtgttaaaacaacatacaccttaaggtgtatttattaactttttagttataacttactaaaacactcccacataaaaactagtgggtg 48560252  T
Q  239 tgttctagcaaatccatatatatata 264  Q
    ||||||||||||||| ||||||||||    
T  48560253 tgttctagcaaatccctatatatata 48560278  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 69; E-Value: 7e-31
Query Start/End: Original strand, 143 - 264
Target Start/End: Original strand, 50182328 - 50182452
Alignment:
Q  143 tttttagagggtgtgttatagcaagatacaccttaa----tatttattaactttttaattataacttgctaaaacactcccagataaaaactaatggatg 238  Q
    |||||||| ||||||||||||||| ||||| |||||    ||||||||||||||||| |||||||||||||||||||||||| |||||||||| ||| ||    
T  50182328 tttttagaaggtgtgttatagcaacatacaacttaaggtgtatttattaactttttagttataacttgctaaaacactcccacataaaaactagtgggtg 50182427  T
Q  239 tgttctagcaaatccatatatatata 264  Q
    ||||||| ||||| ||||||||||||    
T  50182428 tgttctaacaaat-catatatatata 50182452  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 143 - 270
Target Start/End: Original strand, 17181108 - 17181240
Alignment:
Q  143 tttttagagggtgtgttatagcaagatacaccttaa----tatttattaactttttaattataacttgctaaaacactcccagataaaaactaatggatg 238  Q
    |||||||| ||||||||||| ||| |||||||||||    ||||||||||||||||| |||||||||||||||||||||||| ||||||| || ||||||    
T  17181108 tttttagaaggtgtgttataacaacatacaccttaagttgtatttattaactttttagttataacttgctaaaacactcccacataaaaattagtggatg 17181207  T
Q  239 tgttctagcaaatc-catatatatataataaat 270  Q
    | ||||| |||||| ||||||||||||| ||||    
T  17181208 ttttctaacaaatctcatatatatataagaaat 17181240  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 143 - 264
Target Start/End: Original strand, 13211970 - 13212096
Alignment:
Q  143 tttttagagggtgtgttatagcaagatacaccttaa----tatttattaactttttaattataacttgctaaaacactcccagataaaaactaatggatg 238  Q
    |||||||| ||||||||||||||| |||||| ||||    ||||||||||||||||| |||||||||||||||||||||||| |||||||||| ||| ||    
T  13211970 tttttagaaggtgtgttatagcaacatacacattaaggtgtatttattaactttttagttataacttgctaaaacactcccatataaaaactagtgggtg 13212069  T
Q  239 tgttctagcaaatcc-atatatatata 264  Q
    | || |||||||||| |||||||||||    
T  13212070 tattatagcaaatcctatatatatata 13212096  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 143 - 253
Target Start/End: Original strand, 26958692 - 26958806
Alignment:
Q  143 tttttagagggtgtgttatagcaagatacaccttaa----tatttattaactttttaattataacttgctaaaacactcccagataaaaactaatggatg 238  Q
    |||||||| ||||||||||||||| |||||||||||    ||||||||||||||||| ||||||||||||| |||||||||| |||||||||| | | ||    
T  26958692 tttttagaaggtgtgttatagcaacatacaccttaaggtgtatttattaactttttagttataacttgctacaacactcccacataaaaactagtaggtg 26958791  T
Q  239 tgttctagcaaatcc 253  Q
    |||||||||||||||    
T  26958792 tgttctagcaaatcc 26958806  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 143 - 268
Target Start/End: Complemental strand, 30820551 - 30820424
Alignment:
Q  143 tttttagagggtgtgttatagcaagatacaccttaa----tatttattaactttttaattataacttgctaaaacactcccagataaaaactaatggatg 238  Q
    |||||||| ||||||||||||||| |||||||||||    |||||||||||||||||||||||| ||||||||||||||||| |||||||||| ||| ||    
T  30820551 tttttagaaggtgtgttatagcaacatacaccttaaggtgtatttattaactttttaattataatttgctaaaacactcccacataaaaactagtgggtg 30820452  T
Q  239 tgttctagcaaatccatatatatataataa 268  Q
    | ||| |||||||  ||||||||| |||||    
T  30820451 tattcaagcaaat--atatatataaaataa 30820424  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 143 - 265
Target Start/End: Original strand, 47382307 - 47382432
Alignment:
Q  143 tttttagagggtgtgttatagcaagatacaccttaa----tatttattaactttttaattataacttgctaaaacactcccagataaaaactaatggatg 238  Q
    |||||||| ||||||||||| ||| | |||||||||    ||||||||||||||||| |||||||||||||||||||||||| |||||||||| ||| ||    
T  47382307 tttttagaaggtgtgttatatcaacaaacaccttaaggtgtatttattaactttttagttataacttgctaaaacactcccacataaaaactagtgggtg 47382406  T
Q  239 tgttctagcaaatccatatatatataa 265  Q
    ||||||||||||| ||| |||||||||    
T  47382407 tgttctagcaaat-catgtatatataa 47382432  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 143 - 264
Target Start/End: Original strand, 13371366 - 13371491
Alignment:
Q  143 tttttagagggtgtgttatagcaagatacaccttaa----tatttattaactttttaattataacttgctaaaacactcccagataaaaactaatggatg 238  Q
    |||||||| ||||||||||||||| |||||| ||||    ||||||||||||||||| ||||||||| |||||||||||||| |||||||| |  || ||    
T  13371366 tttttagaaggtgtgttatagcaacatacacattaaggtgtatttattaactttttagttataacttactaaaacactcccacataaaaaccagcgggtg 13371465  T
Q  239 tgttctagcaaatccatatatatata 264  Q
    ||||||||||||||| ||||||||||    
T  13371466 tgttctagcaaatccctatatatata 13371491  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 143 - 264
Target Start/End: Original strand, 13381567 - 13381692
Alignment:
Q  143 tttttagagggtgtgttatagcaagatacaccttaa----tatttattaactttttaattataacttgctaaaacactcccagataaaaactaatggatg 238  Q
    |||||||| ||||||||||||||| |||||| ||||    ||||||||||||||||| ||||||||| |||||||||||||| |||||||| |  || ||    
T  13381567 tttttagaaggtgtgttatagcaacatacacattaaggtgtatttattaactttttagttataacttactaaaacactcccacataaaaaccagcgggtg 13381666  T
Q  239 tgttctagcaaatccatatatatata 264  Q
    ||||||||||||||| ||||||||||    
T  13381667 tgttctagcaaatccctatatatata 13381692  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 143 - 264
Target Start/End: Original strand, 49970749 - 49970874
Alignment:
Q  143 tttttagagggtgtgttatagcaagatacaccttaa----tatttattaactttttaattataacttgctaaaacactcccagataaaaactaatggatg 238  Q
    |||||||  ||||||||||||||| |||||||||||    ||||||||||||||||| |||||||||| ||||||||||||| |||||||  |||||||     
T  49970749 tttttagtaggtgtgttatagcaacatacaccttaaggtgtatttattaactttttagttataacttgttaaaacactcccacataaaaatcaatggata 49970848  T
Q  239 tgttctagcaaatccatatatatata 264  Q
    ||||| ||||||| ||||||||||||    
T  49970849 tgttcgagcaaattcatatatatata 49970874  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 146 - 264
Target Start/End: Original strand, 6214142 - 6214271
Alignment:
Q  146 ttagagggtgtgttatagcaagatacaccttaa----tatttattaactttttaattataacttgctaaaacactcccagataaaaactaa-------tg 234  Q
    ||||||||||||||||||||| |||||||||||    ||||||||||||||||| ||||||||||||||||||||| || |||||||||||       ||    
T  6214142 ttagagggtgtgttatagcaacatacaccttaaggtgtatttattaactttttagttataacttgctaaaacactctcacataaaaactaaaaactagtg 6214241  T
Q  235 gatgtgttctagcaaatccatatatatata 264  Q
    | |||||||||||||||| |||||||||||    
T  6214242 ggtgtgttctagcaaatctatatatatata 6214271  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 143 - 264
Target Start/End: Original strand, 3818901 - 3819027
Alignment:
Q  143 tttttagagggtgtgttatagcaagatacaccttaa----tatttattaactttttaattataacttgctaaaacactcccagataaaaactaatggatg 238  Q
    |||||||| | ||||||||||||| |||||| ||||    |||||||||||||||||||||||| ||||||||||||||||| ||||||| || ||| ||    
T  3818901 tttttagaagatgtgttatagcaacatacactttaaggtgtatttattaactttttaattataatttgctaaaacactcccacataaaaattagtgggtg 3819000  T
Q  239 tgttctagcaaatcc-atatatatata 264  Q
    ||||||| ||||||| |||||||||||    
T  3819001 tgttctaacaaatcctatatatatata 3819027  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 159 - 264
Target Start/End: Complemental strand, 578803 - 578694
Alignment:
Q  159 tatagcaagatacaccttaa----tatttattaactttttaattataacttgctaaaacactcccagataaaaactaatggatgtgttctagcaaatcca 254  Q
    |||||||| |||||||||||    |||||||| |||||||| |||||||||||||||||||||||| ||||||| || ||| |||||||||||||||||     
T  578803 tatagcaacatacaccttaaggtgtatttattcactttttagttataacttgctaaaacactcccacataaaaattagtgggtgtgttctagcaaatccc 578704  T
Q  255 tatatatata 264  Q
    ||||||||||    
T  578703 tatatatata 578694  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 59; E-Value: 7e-25
Query Start/End: Original strand, 145 - 252
Target Start/End: Complemental strand, 51784029 - 51783918
Alignment:
Q  145 tttagagggtgtgttatagcaagatacaccttaa----tatttattaactttttaattataacttgctaaaacactcccagataaaaactaatggatgtg 240  Q
    |||||| ||||||||||||||| |||||||||||    ||||||||||||||||| |||| ||||||||||||||| ||| |||||||||| ||| | ||    
T  51784029 tttagaaggtgtgttatagcaacatacaccttaaggtgtatttattaactttttagttattacttgctaaaacacttccacataaaaactagtgggtctg 51783930  T
Q  241 ttctagcaaatc 252  Q
    ||||||||||||    
T  51783929 ttctagcaaatc 51783918  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 143 - 264
Target Start/End: Complemental strand, 52437499 - 52437372
Alignment:
Q  143 tttttagagggtgtgttatagcaagatacaccttaa----tatttattaactttttaattataacttgctaaaacactcccagat---aaaaactaatgg 235  Q
    |||||||| ||||||||||| ||| ||||| |||||    ||||||||||||||||| |||||||||||||||||||||||| ||   ||||| || |||    
T  52437499 tttttagaaggtgtgttataacaacatacaacttaaggtgtatttattaactttttagttataacttgctaaaacactcccacataaaaaaaattagtgg 52437400  T
Q  236 atgtgttctagcaaatccatatatatata 264  Q
     ||||||||||||||| ||||||||||||    
T  52437399 gtgtgttctagcaaat-catatatatata 52437372  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 203 - 264
Target Start/End: Complemental strand, 46106687 - 46106626
Alignment:
Q  203 cttgctaaaacactcccagataaaaactaatggatgtgttctagcaaatccatatatatata 264  Q
    |||||||||||||||||| |||||||||| ||| ||||||||||||||||||||||||||||    
T  46106687 cttgctaaaacactcccacataaaaactagtgggtgtgttctagcaaatccatatatatata 46106626  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 200 - 264
Target Start/End: Original strand, 9744327 - 9744391
Alignment:
Q  200 taacttgctaaaacactcccagataaaaactaatggatgtgttctagcaaatccatatatatata 264  Q
    ||||||||||||| |||| || |||||||||| ||||||||||||||||||||||||||||||||    
T  9744327 taacttgctaaaatactctcacataaaaactagtggatgtgttctagcaaatccatatatatata 9744391  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 203 - 264
Target Start/End: Complemental strand, 26335754 - 26335693
Alignment:
Q  203 cttgctaaaacactcccagataaaaactaatggatgtgttctagcaaatccatatatatata 264  Q
    |||||||||||||||||| |||||||||| | | ||||||||||||||||||||||||||||    
T  26335754 cttgctaaaacactcccacataaaaactagttggtgtgttctagcaaatccatatatatata 26335693  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 204 - 264
Target Start/End: Complemental strand, 41172439 - 41172379
Alignment:
Q  204 ttgctaaaacactcccagataaaaactaatggatgtgttctagcaaatccatatatatata 264  Q
    |||||||| |||||||| |||||||||| ||| ||||||||||||||||||||||||||||    
T  41172439 ttgctaaagcactcccacataaaaactagtgggtgtgttctagcaaatccatatatatata 41172379  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 204 - 264
Target Start/End: Original strand, 49426148 - 49426208
Alignment:
Q  204 ttgctaaaacactcccagataaaaactaatggatgtgttctagcaaatccatatatatata 264  Q
    |||||||||||||| || |||||||||| ||| ||||||||||||||||||||||||||||    
T  49426148 ttgctaaaacactctcacataaaaactagtgggtgtgttctagcaaatccatatatatata 49426208  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 203 - 262
Target Start/End: Complemental strand, 54742461 - 54742402
Alignment:
Q  203 cttgctaaaacactcccagataaaaactaatggatgtgttctagcaaatccatatatata 262  Q
    |||||||||||| ||||| |||||||||| ||| ||||||||||||||||||||||||||    
T  54742461 cttgctaaaacattcccacataaaaactagtgggtgtgttctagcaaatccatatatata 54742402  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 198 - 263
Target Start/End: Original strand, 6137692 - 6137758
Alignment:
Q  198 tataacttgctaaaacactcccagataaaaactaatggatgtgttctagcaaat-ccatatatatat 263  Q
    |||| |||||||||||||||||| |||||||||| ||| ||||||||||||||| ||||||||||||    
T  6137692 tatagcttgctaaaacactcccacataaaaactagtgggtgtgttctagcaaatcccatatatatat 6137758  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 204 - 264
Target Start/End: Complemental strand, 6214012 - 6213951
Alignment:
Q  204 ttgctaaaacactcccagataaaaactaatggatgtgttctagcaaa-tccatatatatata 264  Q
    |||||||||||||| || |||||||||| |||||||||||||||||| ||||||||||||||    
T  6214012 ttgctaaaacactctcacataaaaactagtggatgtgttctagcaaactccatatatatata 6213951  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 203 - 264
Target Start/End: Complemental strand, 14862986 - 14862925
Alignment:
Q  203 cttgctaaaacactcccagataaaaactaatggatgtgttctagcaaatccatatatatata 264  Q
    |||||||||||||||||| |||||||||| ||| ||||||||| ||||||| ||||||||||    
T  14862986 cttgctaaaacactcccacataaaaactagtgggtgtgttctaacaaatccctatatatata 14862925  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 204 - 264
Target Start/End: Original strand, 5046829 - 5046888
Alignment:
Q  204 ttgctaaaacactcccagataaaaactaatggatgtgttctagcaaatccatatatatata 264  Q
    ||||||||||||||||| |||||||||||||| |||||||||||||| || ||||||||||    
T  5046829 ttgctaaaacactcccacataaaaactaatgggtgtgttctagcaaa-ccttatatatata 5046888  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 204 - 264
Target Start/End: Original strand, 10981490 - 10981550
Alignment:
Q  204 ttgctaaaacactcccagataaaaactaatggatgtgttctagcaaatccatatatatata 264  Q
    |||||||||||||| || |||||||||| ||| |||||||||||||| |||||||||||||    
T  10981490 ttgctaaaacactctcacataaaaactagtgggtgtgttctagcaaacccatatatatata 10981550  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 204 - 264
Target Start/End: Complemental strand, 13211844 - 13211784
Alignment:
Q  204 ttgctaaaacactcccagataaaaactaatggatgtgttctagcaaatccatatatatata 264  Q
    |||||||| |||||||| |||||||||| ||| |||||||||||||| |||||||||||||    
T  13211844 ttgctaaagcactcccacataaaaactagtgggtgtgttctagcaaacccatatatatata 13211784  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 204 - 264
Target Start/End: Original strand, 13621503 - 13621563
Alignment:
Q  204 ttgctaaaacactcccagataaaaactaatggatgtgttctagcaaatccatatatatata 264  Q
    ||||||||||||||||| |||||||||| ||||||||||||||| || || ||||||||||    
T  13621503 ttgctaaaacactcccacataaaaactagtggatgtgttctagcgaacccgtatatatata 13621563  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 204 - 264
Target Start/End: Complemental strand, 17180979 - 17180919
Alignment:
Q  204 ttgctaaaacactcccagataaaaactaatggatgtgttctagcaaatccatatatatata 264  Q
    ||||||||||||||||| |||||||||| ||| |||||||||||||| | |||||||||||    
T  17180979 ttgctaaaacactcccacataaaaactagtgggtgtgttctagcaaacctatatatatata 17180919  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 203 - 255
Target Start/End: Complemental strand, 26958569 - 26958517
Alignment:
Q  203 cttgctaaaacactcccagataaaaactaatggatgtgttctagcaaatccat 255  Q
    |||||||||||||||||| |||||||||| ||| |||||||||||||||||||    
T  26958569 cttgctaaaacactcccacataaaaactagtgggtgtgttctagcaaatccat 26958517  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 198 - 253
Target Start/End: Complemental strand, 33811063 - 33811008
Alignment:
Q  198 tataacttgctaaaacactcccagataaaaactaatggatgtgttctagcaaatcc 253  Q
    |||| |||| ||||||||||||| |||||||||| |||||||||||||||||||||    
T  33811063 tatagcttgttaaaacactcccacataaaaactagtggatgtgttctagcaaatcc 33811008  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 203 - 264
Target Start/End: Complemental strand, 142647 - 142585
Alignment:
Q  203 cttgctaaaacactcccagataaaaactaatggatgtgttctagcaaatc-catatatatata 264  Q
    |||||||||||||||| | |||||||||| ||| |||||||||||||||| ||||||||||||    
T  142647 cttgctaaaacactccaacataaaaactagtgggtgtgttctagcaaatctcatatatatata 142585  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 203 - 264
Target Start/End: Complemental strand, 6946658 - 6946596
Alignment:
Q  203 cttgctaaaacactcccagataaaaactaatggatgtgttctagcaaatc-catatatatata 264  Q
    ||||||||||||||| || |||||||||| ||| |||||||||||||||| ||||||||||||    
T  6946658 cttgctaaaacactctcacataaaaactagtgggtgtgttctagcaaatctcatatatatata 6946596  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 203 - 264
Target Start/End: Complemental strand, 33105925 - 33105863
Alignment:
Q  203 cttgctaaaacactcccagataaaaactaatgg-atgtgttctagcaaatccatatatatata 264  Q
    |||||||||| ||||||| |||||||||| ||| ||||||| |||||||||||||||||||||    
T  33105925 cttgctaaaatactcccacataaaaactagtgggatgtgttatagcaaatccatatatatata 33105863  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 204 - 264
Target Start/End: Original strand, 14203059 - 14203120
Alignment:
Q  204 ttgctaaaacactcccagataaaaactaatggatgtgttctagcaaa-tccatatatatata 264  Q
    ||||||||||||||||| |||||||||| ||| ||||||||||||||  |||||||||||||    
T  14203059 ttgctaaaacactcccacataaaaactagtgggtgtgttctagcaaaccccatatatatata 14203120  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 204 - 264
Target Start/End: Complemental strand, 18470286 - 18470225
Alignment:
Q  204 ttgctaaaacactcccagataaaaactaatggatgtgttctagcaaat-ccatatatatata 264  Q
    ||||||||||||||||| |||||||||| ||| ||||||||| ||||| |||||||||||||    
T  18470286 ttgctaaaacactcccacataaaaactagtgggtgtgttctaacaaatcccatatatatata 18470225  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 203 - 264
Target Start/End: Original strand, 23384100 - 23384161
Alignment:
Q  203 cttgctaaaacactcccagataaaaactaatggatgtgttctagcaaatccatatatatata 264  Q
    |||||||||||||||||| |||||||||  ||| | ||||||||||||||| ||||||||||    
T  23384100 cttgctaaaacactcccacataaaaactggtgggtatgttctagcaaatccctatatatata 23384161  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #52
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 203 - 264
Target Start/End: Original strand, 32012834 - 32012894
Alignment:
Q  203 cttgctaaaacactcccagataaaaactaatggatgtgttctagcaaatccatatatatata 264  Q
    |||||||||||||||||| ||||||| || ||| ||||||||||||||| ||||||||||||    
T  32012834 cttgctaaaacactcccacataaaaattagtgggtgtgttctagcaaat-catatatatata 32012894  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #53
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 204 - 253
Target Start/End: Complemental strand, 36955372 - 36955323
Alignment:
Q  204 ttgctaaaacactcccagataaaaactaatggatgtgttctagcaaatcc 253  Q
    ||||||||||||||||| |||||||||| || ||||||||||||||||||    
T  36955372 ttgctaaaacactcccatataaaaactagtgaatgtgttctagcaaatcc 36955323  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #54
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 203 - 264
Target Start/End: Original strand, 38425850 - 38425910
Alignment:
Q  203 cttgctaaaacactcccagataaaaactaatggatgtgttctagcaaatccatatatatata 264  Q
    |||||||||||||||||| |||||||||  ||| ||||||||||||||| ||||||||||||    
T  38425850 cttgctaaaacactcccacataaaaactcgtgggtgtgttctagcaaat-catatatatata 38425910  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #55
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 204 - 264
Target Start/End: Complemental strand, 7630086 - 7630026
Alignment:
Q  204 ttgctaaaacactcccagataaaaactaatggatgtgttctagcaaatccatatatatata 264  Q
    |||||||||||||| || |||||||||| ||| |||||||||||||| | |||||||||||    
T  7630086 ttgctaaaacactctcacataaaaactagtgggtgtgttctagcaaacctatatatatata 7630026  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #56
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 204 - 264
Target Start/End: Complemental strand, 13621127 - 13621067
Alignment:
Q  204 ttgctaaaacactcccagataaaaactaatggatgtgttctagcaaatccatatatatata 264  Q
    ||||||||||||||||| |||||||||| ||| ||||||||||| || || ||||||||||    
T  13621127 ttgctaaaacactcccacataaaaactagtgggtgtgttctagcgaacccctatatatata 13621067  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #57
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 203 - 264
Target Start/End: Original strand, 102367 - 102428
Alignment:
Q  203 cttgctaaaacactcccagataaaaactaatgg-atgtgttctagcaaatccatatatatata 264  Q
    |||||||||||||||||| |||||| ||| ||| | |||||||||||||||||||||||||||    
T  102367 cttgctaaaacactcccacataaaa-ctagtggcacgtgttctagcaaatccatatatatata 102428  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #58
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 203 - 264
Target Start/End: Complemental strand, 4490678 - 4490616
Alignment:
Q  203 cttgctaaaacactcccagataaaaactaatggatgtgttctagcaaatcc-atatatatata 264  Q
    |||| ||||||||||||| ||||||| || ||| ||||||||||||||||| |||||||||||    
T  4490678 cttgttaaaacactcccacataaaaattagtgggtgtgttctagcaaatcctatatatatata 4490616  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #59
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 203 - 264
Target Start/End: Original strand, 4505590 - 4505652
Alignment:
Q  203 cttgctaaaacactcccagataaaaactaatggatgtgttctagcaaat-ccatatatatata 264  Q
    |||||||||||||||||| |||||||||| ||| |||||| |||||| | |||||||||||||    
T  4505590 cttgctaaaacactcccacataaaaactagtgggtgtgttttagcaattcccatatatatata 4505652  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #60
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 203 - 253
Target Start/End: Complemental strand, 4712670 - 4712620
Alignment:
Q  203 cttgctaaaacactcccagataaaaactaatggatgtgttctagcaaatcc 253  Q
    |||||||||||||||||| |||||||| ||||| |||||| ||||||||||    
T  4712670 cttgctaaaacactcccacataaaaaccaatgggtgtgttttagcaaatcc 4712620  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #61
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 204 - 264
Target Start/End: Complemental strand, 5157027 - 5156966
Alignment:
Q  204 ttgctaaaacactcccagataaaaactaa-tggatgtgttctagcaaatccatatatatata 264  Q
    |||||||||||||  || ||||||||||| ||| |||||||||||||| |||||||||||||    
T  5157027 ttgctaaaacactttcacataaaaactaaatgggtgtgttctagcaaacccatatatatata 5156966  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #62
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 204 - 264
Target Start/End: Complemental strand, 13371246 - 13371186
Alignment:
Q  204 ttgctaaaacactcccagataaaaactaatggatgtgttctagcaaa-tccatatatatata 264  Q
    ||||||||||||||||| |||||||||| ||| ||||||||||||||  |||||||||||||    
T  13371246 ttgctaaaacactcccacataaaaactagtgg-tgtgttctagcaaaccccatatatatata 13371186  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #63
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 204 - 264
Target Start/End: Complemental strand, 13381447 - 13381387
Alignment:
Q  204 ttgctaaaacactcccagataaaaactaatggatgtgttctagcaaa-tccatatatatata 264  Q
    ||||||||||||||||| |||||||||| ||| ||||||||||||||  |||||||||||||    
T  13381447 ttgctaaaacactcccacataaaaactagtgg-tgtgttctagcaaaccccatatatatata 13381387  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #64
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 207 - 264
Target Start/End: Complemental strand, 29101994 - 29101937
Alignment:
Q  207 ctaaaacactcccagataaaaactaatggatgtgttctagcaaatccatatatatata 264  Q
    |||||||||||| | |||||||||| ||| ||||||||||||||| | ||||||||||    
T  29101994 ctaaaacactcctacataaaaactagtgggtgtgttctagcaaattcctatatatata 29101937  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #65
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 204 - 264
Target Start/End: Original strand, 30820678 - 30820739
Alignment:
Q  204 ttgctaaaacactcccagataaaaactaatggatgtgttctagcaaa-tccatatatatata 264  Q
    ||||||||||||| ||| |||||||||| ||| ||||||||||||||  |||||||||||||    
T  30820678 ttgctaaaacacttccacataaaaactagtgggtgtgttctagcaaaccccatatatatata 30820739  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #66
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 204 - 264
Target Start/End: Complemental strand, 48560027 - 48559966
Alignment:
Q  204 ttgctaaaacactcccagataaaaactaatggatgtgttctagcaaa-tccatatatatata 264  Q
    ||||||||||||||||| ||||||| || ||| ||||||||||||||  |||||||||||||    
T  48560027 ttgctaaaacactcccacataaaaattagtgggtgtgttctagcaaaccccatatatatata 48559966  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #67
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 204 - 264
Target Start/End: Original strand, 33811312 - 33811372
Alignment:
Q  204 ttgctaaaacactcccagataaaaactaatggatgtgttctagcaaatccatatatatata 264  Q
    ||||||||||||||||| ||||||| || ||| ||| | |||||||| |||||||||||||    
T  33811312 ttgctaaaacactcccacataaaaattagtgggtgtatcctagcaaacccatatatatata 33811372  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #68
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 204 - 264
Target Start/End: Complemental strand, 52306780 - 52306720
Alignment:
Q  204 ttgctaaaacactcccagataaaaactaatggatgtgttctagcaaatccatatatatata 264  Q
    |||||||||||||| |  |||||||||| ||| |||||||||||||||  |||||||||||    
T  52306780 ttgctaaaacactctcccataaaaactagtgggtgtgttctagcaaatatatatatatata 52306720  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #69
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 205 - 264
Target Start/End: Original strand, 34683238 - 34683297
Alignment:
Q  205 tgctaaaacactcccagataaaaactaatggatgtgttctagcaaatccatatatatata 264  Q
    ||||||||||||||||  ||||||||| ||| |||||||||| ||||  |||||||||||    
T  34683238 tgctaaaacactcccacgtaaaaactagtgggtgtgttctagtaaatatatatatatata 34683297  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #70
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 203 - 264
Target Start/End: Original strand, 13211675 - 13211737
Alignment:
Q  203 cttgctaaaacactcccagataaaaactaatggatgtgttctagcaaatc-catatatatata 264  Q
    |||||||||||||||||| || ||||||| ||  ||||||||||||||||  |||||||||||    
T  13211675 cttgctaaaacactcccacatcaaaactagtgagtgtgttctagcaaatcttatatatatata 13211737  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #71
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 203 - 264
Target Start/End: Complemental strand, 14948136 - 14948074
Alignment:
Q  203 cttgctaaaacactcccagataaaaactaatggatgtgttctagcaaatc-catatatatata 264  Q
    ||||||||||| |||| | |||||||||| ||| ||||||||| |||||| ||||||||||||    
T  14948136 cttgctaaaaccctcctacataaaaactagtgggtgtgttctaacaaatctcatatatatata 14948074  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #72
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 203 - 253
Target Start/End: Original strand, 20459180 - 20459230
Alignment:
Q  203 cttgctaaaacactcccagataaaaactaatggatgtgttctagcaaatcc 253  Q
    |||||||||||||||||| |||||||||| ||| ||| ||||| |||||||    
T  20459180 cttgctaaaacactcccacataaaaactagtgggtgtattctaacaaatcc 20459230  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #73
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 203 - 253
Target Start/End: Complemental strand, 45875772 - 45875723
Alignment:
Q  203 cttgctaaaacactcccagataaaaactaatggatgtgttctagcaaatcc 253  Q
    |||| ||||||||||||| ||||||||| |||| |||||||||||||||||    
T  45875772 cttgttaaaacactcccacataaaaact-atgggtgtgttctagcaaatcc 45875723  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #74
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 187 - 264
Target Start/End: Original strand, 49606179 - 49606257
Alignment:
Q  187 aactttttaattataactt-gctaaaacactcccagataaaaactaatggatgtgttctagcaaatccatatatatata 264  Q
    ||||||||| ||||| ||| |||||||||| |||  |||||||||||||| ||| | |||||||| || ||||||||||    
T  49606179 aactttttagttatatctttgctaaaacacaccctaataaaaactaatgggtgtatcctagcaaacccctatatatata 49606257  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #75
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 204 - 250
Target Start/End: Complemental strand, 49970624 - 49970578
Alignment:
Q  204 ttgctaaaacactcccagataaaaactaatggatgtgttctagcaaa 250  Q
    ||||||||||||||||| ||||||| || ||| ||||||||||||||    
T  49970624 ttgctaaaacactcccaaataaaaattagtgggtgtgttctagcaaa 49970578  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #76
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 204 - 264
Target Start/End: Complemental strand, 17745177 - 17745120
Alignment:
Q  204 ttgctaaaacactcccagataaaaactaatggatgtgttctagcaaatccatatatatata 264  Q
    ||||||||||||| |||  ||||||||| ||| |||||||||||||| |||||||||||||    
T  17745177 ttgctaaaacacttcca--taaaaactagtgggtgtgttctagcaaa-ccatatatatata 17745120  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #77
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 208 - 264
Target Start/End: Complemental strand, 45801829 - 45801772
Alignment:
Q  208 taaaacactcccagataaaaactaatggatgtgttctagcaaatc-catatatatata 264  Q
    ||||||||||||| |||||||||||| |||||||||| ||| | | ||||||||||||    
T  45801829 taaaacactcccacataaaaactaatagatgtgttcttgcagacctcatatatatata 45801772  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #78
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 204 - 264
Target Start/End: Complemental strand, 17377522 - 17377462
Alignment:
Q  204 ttgctaaaacactcccagataaaaactaatggatgtgttctagcaaatccatatatatata 264  Q
    ||||||||||||||||  |||||||||| ||| |||||||||||| |   |||||||||||    
T  17377522 ttgctaaaacactcccgcataaaaactagtgggtgtgttctagcacacatatatatatata 17377462  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #79
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 203 - 251
Target Start/End: Complemental strand, 43638990 - 43638942
Alignment:
Q  203 cttgctaaaacactcccagataaaaactaatggatgtgttctagcaaat 251  Q
    |||||||||| ||| ||| ||||||| ||||| ||||||||||||||||    
T  43638990 cttgctaaaatacttccacataaaaattaatgaatgtgttctagcaaat 43638942  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #80
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 203 - 262
Target Start/End: Complemental strand, 49606032 - 49605972
Alignment:
Q  203 cttgctaaaacactcccagataaaaactaatggatgtgttctagcaaat-ccatatatata 262  Q
    |||| |||||||||||||  ||||||||| ||| | ||||||||||||| |||||||||||    
T  49606032 cttgttaaaacactcccacctaaaaactagtgggtatgttctagcaaatcccatatatata 49605972  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #81
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 204 - 264
Target Start/End: Complemental strand, 50182204 - 50182144
Alignment:
Q  204 ttgctaaaacactcccagataaaaactaatggatgtgttctagcaaatccatatatatata 264  Q
    ||||||||| |||  || ||||||| |||||| |||||||||||||| || ||||||||||    
T  50182204 ttgctaaaatactttcacataaaaattaatgggtgtgttctagcaaacccctatatatata 50182144  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #82
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 204 - 264
Target Start/End: Complemental strand, 56532577 - 56532517
Alignment:
Q  204 ttgctaaaacactcccagataaaaactaatggatgtgttctagcaaatccatatatatata 264  Q
    ||||||||||||||||| || || | || ||| |||||| ||||||| |||||||||||||    
T  56532577 ttgctaaaacactcccacatgaatattagtgggtgtgttatagcaaacccatatatatata 56532517  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 81; Significance: 5e-38; HSPs: 55)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 81; E-Value: 5e-38
Query Start/End: Original strand, 143 - 264
Target Start/End: Complemental strand, 1783065 - 1782940
Alignment:
Q  143 tttttagagggtgtgttatagcaagatacaccttaa----tatttattaactttttaattataacttgctaaaacactcccagataaaaactaatggatg 238  Q
    |||||||| ||||||||||||||| |||||||||||    ||||||||||||||||| |||||||||||||||||||||||| |||||||||| ||| ||    
T  1783065 tttttagaaggtgtgttatagcaacatacaccttaaggtgtatttattaactttttagttataacttgctaaaacactcccacataaaaactagtgggtg 1782966  T
Q  239 tgttctagcaaatccatatatatata 264  Q
    |||| |||||||||||||||||||||    
T  1782965 tgttatagcaaatccatatatatata 1782940  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 81; E-Value: 5e-38
Query Start/End: Original strand, 143 - 264
Target Start/End: Complemental strand, 9483712 - 9483587
Alignment:
Q  143 tttttagagggtgtgttatagcaagatacaccttaat----atttattaactttttaattataacttgctaaaacactcccagataaaaactaatggatg 238  Q
    |||||||| ||||||||||||||| ||||||||||||    |||||||||||||||| |||||||||| ||||||||||||| |||||||||| ||| ||    
T  9483712 tttttagaaggtgtgttatagcaacatacaccttaatgtctatttattaactttttagttataacttgttaaaacactcccacataaaaactagtgggtg 9483613  T
Q  239 tgttctagcaaatccatatatatata 264  Q
    ||||||||||||||||||||||||||    
T  9483612 tgttctagcaaatccatatatatata 9483587  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 146 - 263
Target Start/End: Complemental strand, 30577928 - 30577807
Alignment:
Q  146 ttagagggtgtgttatagcaagatacaccttaa----tatttattaactttttaattataacttgctaaaacactcccagataaaaactaatggatgtgt 241  Q
    ||||| ||||||||||||||| |||||||||||    ||||||||||||||| | ||||||||||||||||||||| || |||||||||||||| |||||    
T  30577928 ttagaaggtgtgttatagcaacatacaccttaaggtgtatttattaacttttcagttataacttgctaaaacactctcacataaaaactaatgggtgtgt 30577829  T
Q  242 tctagcaaatccatatatatat 263  Q
    ||||||||||||||||||||||    
T  30577828 tctagcaaatccatatatatat 30577807  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 74; E-Value: 7e-34
Query Start/End: Original strand, 143 - 264
Target Start/End: Original strand, 4018670 - 4018796
Alignment:
Q  143 tttttagagggtgtgttatagcaagatacaccttaa----tatttattaactttttaattataacttgctaaaacactcccagataaaaactaatggatg 238  Q
    |||||||| ||||||||||||||| |||||||||||    ||||||||||||||||| |||||||||||||||||||||||| |||||||||| ||| ||    
T  4018670 tttttagaaggtgtgttatagcaacatacaccttaaggtgtatttattaactttttagttataacttgctaaaacactcccacataaaaactagtgggtg 4018769  T
Q  239 tgttctagcaaat-ccatatatatata 264  Q
    ||||||| ||||| |||||||||||||    
T  4018770 tgttctaacaaatcccatatatatata 4018796  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 143 - 254
Target Start/End: Complemental strand, 21442191 - 21442076
Alignment:
Q  143 tttttagagggtgtgttatagcaagatacaccttaa----tatttattaactttttaattataacttgctaaaacactcccagataaaaactaatggatg 238  Q
    |||||||| ||||||||||||||| |||||||||||    ||||||||||||||||| ||||||||| |||||||||||||| ||||||| || ||| ||    
T  21442191 tttttagaaggtgtgttatagcaacatacaccttaagatgtatttattaactttttagttataacttactaaaacactcccacataaaaattagtgggtg 21442092  T
Q  239 tgttctagcaaatcca 254  Q
    ||||||||||||||||    
T  21442091 tgttctagcaaatcca 21442076  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 147 - 253
Target Start/End: Original strand, 3154208 - 3154318
Alignment:
Q  147 tagagggtgtgttatagcaagatacaccttaa----tatttattaactttttaattataacttgctaaaacactcccagataaaaactaatggatgtgtt 242  Q
    |||| ||||||||||||||| |||||||||||    ||||||||||||||||| |||||||||||||||||||||||| ||||||| || ||| ||||||    
T  3154208 tagaaggtgtgttatagcaacatacaccttaaggtgtatttattaactttttagttataacttgctaaaacactcccacataaaaattagtgggtgtgtt 3154307  T
Q  243 ctagcaaatcc 253  Q
    |||||||||||    
T  3154308 ctagcaaatcc 3154318  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 143 - 253
Target Start/End: Complemental strand, 14819370 - 14819256
Alignment:
Q  143 tttttagagggtgtgttatagcaagatacaccttaa----tatttattaactttttaattataacttgctaaaacactcccagataaaaactaatggatg 238  Q
    |||||||| ||||||||||||||| |||||||||||    | ||||||||||||||| |||||||||||||||||||||||| ||||||| || ||| ||    
T  14819370 tttttagaaggtgtgttatagcaacatacaccttaaggtgtgtttattaactttttagttataacttgctaaaacactcccacataaaaattagtgggtg 14819271  T
Q  239 tgttctagcaaatcc 253  Q
    |||||||||||||||    
T  14819270 tgttctagcaaatcc 14819256  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 143 - 264
Target Start/End: Original strand, 19971565 - 19971691
Alignment:
Q  143 tttttagagggtgtgttatagcaagatacaccttaa----tatttattaactttttaattataacttgctaaaacactcccagataaaaactaatggatg 238  Q
    |||||||| |||||||||||| || |||||||||||    ||||||||||||||||| |||||||||||||||||||||| | |||||||||| ||| ||    
T  19971565 tttttagaaggtgtgttatagtaacatacaccttaaggtgtatttattaactttttagttataacttgctaaaacactccaacataaaaactagtgggtg 19971664  T
Q  239 tgttctagcaaa-tccatatatatata 264  Q
    |||||||||||| || |||||||||||    
T  19971665 tgttctagcaaattctatatatatata 19971691  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 143 - 256
Target Start/End: Original strand, 1775530 - 1775647
Alignment:
Q  143 tttttagagggtgtgttatagcaagatacaccttaa----tatttattaactttttaattataacttgctaaaacactcccagataaaaactaatggatg 238  Q
    |||| ||| ||||||||||||||| |||||||||||    ||||||||||| ||||| |||||||||| ||||||||||||| |||||||||| ||| ||    
T  1775530 ttttaagaaggtgtgttatagcaacatacaccttaaggtgtatttattaacattttagttataacttgttaaaacactcccacataaaaactagtgggtg 1775629  T
Q  239 tgttctagcaaatccata 256  Q
    ||||||||||||||||||    
T  1775630 tgttctagcaaatccata 1775647  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 143 - 252
Target Start/End: Complemental strand, 41942922 - 41942809
Alignment:
Q  143 tttttagagggtgtgttatagcaagatacaccttaa----tatttattaactttttaattataacttgctaaaacactcccagataaaaactaatggatg 238  Q
    |||||||| ||||||||||||||||||||||||||     ||||||||||||||||| |||||||||||||||||||||||| ||||||||||  || ||    
T  41942922 tttttagaaggtgtgttatagcaagatacaccttagggtgtatttattaactttttagttataacttgctaaaacactcccacataaaaactagcgggtg 41942823  T
Q  239 tgttctagcaaatc 252  Q
     |||||||||||||    
T  41942822 cgttctagcaaatc 41942809  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 59; E-Value: 7e-25
Query Start/End: Original strand, 143 - 253
Target Start/End: Original strand, 14826425 - 14826540
Alignment:
Q  143 tttttagagggtgtgttatagcaagatacaccttaa----tatttattaactttttaattataacttgctaaaacactccca-gataaaaactaatggat 237  Q
    |||||||| ||||||||||||||| |||||||||||    ||||||||||||||||| ||||||||||||||||||||||||  ||||||| || | | |    
T  14826425 tttttagaaggtgtgttatagcaacatacaccttaaggtgtatttattaactttttagttataacttgctaaaacactcccaccataaaaattacttggt 14826524  T
Q  238 gtgttctagcaaatcc 253  Q
    ||||||||||||||||    
T  14826525 gtgttctagcaaatcc 14826540  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 179 - 264
Target Start/End: Complemental strand, 42556444 - 42556359
Alignment:
Q  179 tatttattaactttttaattataacttgctaaaacactcccagataaaaactaatggatgtgttctagcaaatccatatatatata 264  Q
    ||||||||||||||||| |||||||||| |||||||||||||  |||||||||  || ||||||||||||||||||||||||||||    
T  42556444 tatttattaactttttagttataacttgttaaaacactcccacgtaaaaactagcgggtgtgttctagcaaatccatatatatata 42556359  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 143 - 231
Target Start/End: Complemental strand, 31071617 - 31071525
Alignment:
Q  143 tttttagagggtgtgttatagcaagatacaccttaa----tatttattaactttttaattataacttgctaaaacactcccagataaaaacta 231  Q
    |||||||| ||||||||||||| | |||||||||||    |||||||||| |||||| |||||||||||||||||||||||| ||||||||||    
T  31071617 tttttagaaggtgtgttatagcgacatacaccttaaggtgtatttattaattttttagttataacttgctaaaacactcccacataaaaacta 31071525  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 200 - 264
Target Start/End: Complemental strand, 29377895 - 29377831
Alignment:
Q  200 taacttgctaaaacactcccagataaaaactaatggatgtgttctagcaaatccatatatatata 264  Q
    ||||||||||||||||||||| ||||||||||  || ||||||||||||||||||||||||||||    
T  29377895 taacttgctaaaacactcccacataaaaactagggggtgtgttctagcaaatccatatatatata 29377831  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 198 - 264
Target Start/End: Complemental strand, 2823617 - 2823551
Alignment:
Q  198 tataacttgctaaaacactcccagataaaaactaatggatgtgttctagcaaatccatatatatata 264  Q
    |||| |||||||||||||| ||| |||||||||| ||| ||||||||||||||||||||||||||||    
T  2823617 tatagcttgctaaaacacttccacataaaaactagtgggtgtgttctagcaaatccatatatatata 2823551  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 198 - 264
Target Start/End: Complemental strand, 23053865 - 23053799
Alignment:
Q  198 tataacttgctaaaacactcccagataaaaactaatggatgtgttctagcaaatccatatatatata 264  Q
    |||| |||||||||||||||||| |||||||||| ||| |||||||||||||| |||||||||||||    
T  23053865 tatagcttgctaaaacactcccacataaaaactagtgggtgtgttctagcaaacccatatatatata 23053799  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 203 - 264
Target Start/End: Complemental strand, 8258332 - 8258271
Alignment:
Q  203 cttgctaaaacactcccagataaaaactaatggatgtgttctagcaaatccatatatatata 264  Q
    |||||||||||||||||| |||||||||| ||| |||||| |||||||||||||||||||||    
T  8258332 cttgctaaaacactcccacataaaaactagtgggtgtgttatagcaaatccatatatatata 8258271  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 147 - 252
Target Start/End: Complemental strand, 25281055 - 25280945
Alignment:
Q  147 tagagggtgtgttatagcaagatacaccttaa----tatttattaactttttaattataacttgctaaaacactcccagataaaaactaatggatgtg-t 241  Q
    |||| |||||||||||||||  ||||||||||    ||||||||||||||||| |||||| ||| |||||||||| || |||||||||| ||| |||| |    
T  25281055 tagaaggtgtgttatagcaacttacaccttaaggtgtatttattaactttttagttataatttgttaaaacactctcacataaaaactagtgggtgtgtt 25280956  T
Q  242 tctagcaaatc 252  Q
    |||||||||||    
T  25280955 tctagcaaatc 25280945  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 200 - 253
Target Start/End: Original strand, 30207350 - 30207403
Alignment:
Q  200 taacttgctaaaacactcccagataaaaactaatggatgtgttctagcaaatcc 253  Q
    ||||||||||||||||||||| |||||||||| |||||||||||||||||||||    
T  30207350 taacttgctaaaacactcccacataaaaactagtggatgtgttctagcaaatcc 30207403  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 203 - 264
Target Start/End: Original strand, 36901273 - 36901334
Alignment:
Q  203 cttgctaaaacactcccagataaaaactaatggatgtgttctagcaaatccatatatatata 264  Q
    |||||||||||||||||| |||||||||| ||| |||||| |||||||||||||||||||||    
T  36901273 cttgctaaaacactcccacataaaaactagtgggtgtgttttagcaaatccatatatatata 36901334  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 203 - 254
Target Start/End: Complemental strand, 35550602 - 35550551
Alignment:
Q  203 cttgctaaaacactcccagataaaaactaatggatgtgttctagcaaatcca 254  Q
    |||||||||||||||||| |||||||||| ||||||||||||||||||||||    
T  35550602 cttgctaaaacactcccacataaaaactagtggatgtgttctagcaaatcca 35550551  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 204 - 250
Target Start/End: Original strand, 41943045 - 41943091
Alignment:
Q  204 ttgctaaaacactcccagataaaaactaatggatgtgttctagcaaa 250  Q
    ||||||||||||||||| |||||||||||||||||||||||||||||    
T  41943045 ttgctaaaacactcccacataaaaactaatggatgtgttctagcaaa 41943091  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 200 - 264
Target Start/End: Complemental strand, 1281897 - 1281832
Alignment:
Q  200 taacttgctaaaacactcccagataaaaactaatggatgtgttctagcaaat-ccatatatatata 264  Q
    ||||||||||||||||||||| ||||||| || ||| ||||||||||||||| |||||||||||||    
T  1281897 taacttgctaaaacactcccacataaaaattagtgggtgtgttctagcaaatcccatatatatata 1281832  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 203 - 264
Target Start/End: Complemental strand, 17952640 - 17952579
Alignment:
Q  203 cttgctaaaacactcccagataaaaactaatggatgtgttctagcaaatccatatatatata 264  Q
    |||||||||||||||||| |||||||||| ||||||||||||| |||||  |||||||||||    
T  17952640 cttgctaaaacactcccacataaaaactagtggatgtgttctaccaaatatatatatatata 17952579  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 207 - 264
Target Start/End: Complemental strand, 30633071 - 30633014
Alignment:
Q  207 ctaaaacactcccagataaaaactaatggatgtgttctagcaaatccatatatatata 264  Q
    ||||||||||| || |||||||||||||| ||||||||||||||||| ||||||||||    
T  30633071 ctaaaacactctcacataaaaactaatgggtgtgttctagcaaatccctatatatata 30633014  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 200 - 263
Target Start/End: Complemental strand, 39934414 - 39934350
Alignment:
Q  200 taacttgctaaaacactcccagataaaaactaatggatgtgttctagcaaatcc-atatatatat 263  Q
    ||||||| ||||||||||||| |||||||||| ||| ||||||||||||||||| ||||||||||    
T  39934414 taacttgataaaacactcccaaataaaaactagtgggtgtgttctagcaaatcctatatatatat 39934350  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 203 - 253
Target Start/End: Original strand, 25128057 - 25128107
Alignment:
Q  203 cttgctaaaacactcccagataaaaactaatggatgtgttctagcaaatcc 253  Q
    |||||||||||||||||| |||||||||||||| |||||| ||||||||||    
T  25128057 cttgctaaaacactcccacataaaaactaatgggtgtgttatagcaaatcc 25128107  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 203 - 264
Target Start/End: Complemental strand, 29125720 - 29125658
Alignment:
Q  203 cttgctaaaacactcccagataaaaactaatggatgtgttctagcaaatcc-atatatatata 264  Q
    |||||||||||||||||| ||||||| || ||| ||||||||||||||||| |||||||||||    
T  29125720 cttgctaaaacactcccacataaaaattagtgggtgtgttctagcaaatcctatatatatata 29125658  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 204 - 264
Target Start/End: Complemental strand, 2178715 - 2178654
Alignment:
Q  204 ttgctaaaacactcccagataaaaactaatggatgtgttctagcaaat-ccatatatatata 264  Q
    ||||||||||||||||| |||||||| | ||||||| ||||||||||| |||||||||||||    
T  2178715 ttgctaaaacactcccatataaaaaccagtggatgtcttctagcaaatcccatatatatata 2178654  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 204 - 264
Target Start/End: Original strand, 21442317 - 21442378
Alignment:
Q  204 ttgctaaaacactcccagataaaaactaatggatgtgttctagcaaa-tccatatatatata 264  Q
    ||||||||||||||||| |||||||||| ||| ||||||||||||||  |||||||||||||    
T  21442317 ttgctaaaacactcccacataaaaactagtgggtgtgttctagcaaaccccatatatatata 21442378  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 203 - 264
Target Start/End: Original strand, 26630208 - 26630269
Alignment:
Q  203 cttgctaaaacactcccagataaaaactaatggatgtgttctagcaaatccatatatatata 264  Q
    |||||| ||||||||||| |||||||||| ||| |||||||||| ||||| |||||||||||    
T  26630208 cttgctcaaacactcccacataaaaactagtgggtgtgttctagtaaatctatatatatata 26630269  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 203 - 264
Target Start/End: Complemental strand, 26867933 - 26867872
Alignment:
Q  203 cttgctaaaacactcccagataaaaactaatggatgtgttctagcaaatccatatatatata 264  Q
    |||||||||  ||||||| ||||||| || ||||||||||||||||||||| ||||||||||    
T  26867933 cttgctaaattactcccacataaaaattattggatgtgttctagcaaatccctatatatata 26867872  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 203 - 264
Target Start/End: Original strand, 42556521 - 42556581
Alignment:
Q  203 cttgctaaaacactcccagataaaaactaatggatgtgttctagcaaatccatatatatata 264  Q
    ||||||||||||| |||| |||||||||| ||| ||||||||||||||||| ||||||||||    
T  42556521 cttgctaaaacac-cccacataaaaactagtgggtgtgttctagcaaatccctatatatata 42556581  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 207 - 263
Target Start/End: Original strand, 1783180 - 1783235
Alignment:
Q  207 ctaaaacactcccagataaaaactaatggatgtgttctagcaaatccatatatatat 263  Q
    |||||||||||||| |||||||||| ||| |||||||||||||| ||||||||||||    
T  1783180 ctaaaacactcccacataaaaactagtgggtgtgttctagcaaa-ccatatatatat 1783235  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 203 - 255
Target Start/End: Original strand, 32512219 - 32512271
Alignment:
Q  203 cttgctaaaacactcccagataaaaactaatggatgtgttctagcaaatccat 255  Q
    ||||||||||||||| || |||||||||| ||||||||||||| |||||||||    
T  32512219 cttgctaaaacactctcacataaaaactagtggatgtgttctaacaaatccat 32512271  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 143 - 215
Target Start/End: Complemental strand, 18804385 - 18804309
Alignment:
Q  143 tttttagagggtgtgttatagcaagatacaccttaa----tatttattaactttttaattataacttgctaaaacac 215  Q
    |||||||| ||||| ||||||||| |||||||| ||    ||||||| |||||||||||||||||||| ||||||||    
T  18804385 tttttagaaggtgtcttatagcaacatacacctcaaggtgtatttatcaactttttaattataacttgttaaaacac 18804309  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 204 - 250
Target Start/End: Complemental strand, 3154115 - 3154069
Alignment:
Q  204 ttgctaaaacactcccagataaaaactaatggatgtgttctagcaaa 250  Q
    ||||||||||||||||| |||||||||| ||| ||||||||||||||    
T  3154115 ttgctaaaacactcccacataaaaactagtgggtgtgttctagcaaa 3154069  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 143 - 206
Target Start/End: Complemental strand, 21021248 - 21021181
Alignment:
Q  143 tttttagagggtgtgttatagcaagatacaccttaa----tatttattaactttttaattataacttg 206  Q
    |||||||| |||||||||||| || |||||||||||    ||||||||||||||||| ||||||||||    
T  21021248 tttttagaaggtgtgttatagtaacatacaccttaaggtgtatttattaactttttatttataacttg 21021181  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 203 - 253
Target Start/End: Complemental strand, 26042951 - 26042901
Alignment:
Q  203 cttgctaaaacactcccagataaaaactaatggatgtgttctagcaaatcc 253  Q
    |||||||||||||||||| ||||||| || ||| |||||||||||||||||    
T  26042951 cttgctaaaacactcccacataaaaattagtgggtgtgttctagcaaatcc 26042901  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 203 - 264
Target Start/End: Original strand, 34103186 - 34103248
Alignment:
Q  203 cttgctaaaacactcccagataaaaactaatggatgtgttctagcaaat-ccatatatatata 264  Q
    |||||||||||| ||||| || ||||||| ||| ||||||||||||||| |||||||||||||    
T  34103186 cttgctaaaacaatcccacatgaaaactagtgggtgtgttctagcaaatcccatatatatata 34103248  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 203 - 264
Target Start/End: Original strand, 3369897 - 3369958
Alignment:
Q  203 cttgctaaaacactcccagataaaaactaatggatgtgttctagcaaatccatatatatata 264  Q
    |||||||||||||||||| |||||||||| |   ||||||||| ||||| ||||||||||||    
T  3369897 cttgctaaaacactcccacataaaaactagtatgtgtgttctaacaaatacatatatatata 3369958  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #42
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 204 - 264
Target Start/End: Original strand, 9483838 - 9483899
Alignment:
Q  204 ttgctaaaacactcccagataaaaactaatggatgtgttctagcaaa-tccatatatatata 264  Q
    ||||||||| ||||||| |||||||||| ||| ||||||||||||||  |||||||||||||    
T  9483838 ttgctaaaatactcccacataaaaactagtgggtgtgttctagcaaaccccatatatatata 9483899  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #43
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 143 - 264
Target Start/End: Complemental strand, 10616355 - 10616229
Alignment:
Q  143 tttttagagggtgtgttatagcaagatacaccttaatatttatt----aactttttaattataactt-gctaaaacactcccagataaaaactaatggat 237  Q
    |||||||| |||||||| |||||| || ||||||||| | ||||    ||||||||| ||||| ||| |||||||||| ||   |||||||||| ||| |    
T  10616355 tttttagaaggtgtgttttagcaatattcaccttaatgtatatttaacaactttttagttatatctttgctaaaacacaccttaataaaaactagtgggt 10616256  T
Q  238 gtgttctagcaaatccatatatatata 264  Q
    || | |||||||| |||||||||||||    
T  10616255 gtatcctagcaaacccatatatatata 10616229  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #44
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 203 - 264
Target Start/End: Complemental strand, 23161329 - 23161269
Alignment:
Q  203 cttgctaaaacactcccagataaaaactaatggatgtgttctagcaaatccatatatatata 264  Q
    |||||||||||||||||| || ||||||| ||| | ||||||||||||| ||||||||||||    
T  23161329 cttgctaaaacactcccacatgaaaactagtgggtatgttctagcaaat-catatatatata 23161269  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #45
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 143 - 264
Target Start/End: Complemental strand, 25127933 - 25127807
Alignment:
Q  143 tttttagagggtgtgttatagcaagatacaccttaa----tatttattaactttttaattataactt-gctaaaacactcccagataaaaactaatggat 237  Q
    |||||||| ||| |||| |||||| || ||||||||    ||||||  |||||||||||||||  || ||||||||||||||| ||||||| |||||| |    
T  25127933 tttttagaaggtttgttttagcaacattcaccttaaggtgtatttaacaactttttaattatatttttgctaaaacactcccacataaaaattaatggtt 25127834  T
Q  238 gtgttctagcaaatccatatatatata 264  Q
    || | |||||||| || | ||||||||    
T  25127833 gtatcctagcaaacccctgtatatata 25127807  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #46
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 204 - 264
Target Start/End: Original strand, 31071742 - 31071803
Alignment:
Q  204 ttgctaaaacactcccagataaaaactaatggatgtgttctagcaaat-ccatatatatata 264  Q
    ||||||||||||||||| |||||||||| ||| |||||||||| |||| | |||||||||||    
T  31071742 ttgctaaaacactcccacataaaaactagtgggtgtgttctagaaaatgctatatatatata 31071803  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #47
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 203 - 264
Target Start/End: Original strand, 32069206 - 32069267
Alignment:
Q  203 cttgctaaaacactcccagataaaaactaatggatgtgttctagcaaatccatatatatata 264  Q
    ||||||||||||||| || || ||||||| ||| |||| |||||||||||| ||||||||||    
T  32069206 cttgctaaaacactcacacatgaaaactagtgggtgtggtctagcaaatccctatatatata 32069267  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #48
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 143 - 264
Target Start/End: Complemental strand, 42556746 - 42556620
Alignment:
Q  143 tttttagagggtgtgttatagcaagatacaccttaa----tatttattaactttttaattataactt-gctaaaacactcccagataaaaactaatggat 237  Q
    |||||| | |||||||| |||||| || ||||||||    ||||||  ||||||||| ||||| ||| |||||||||| |||  |||||||||| ||| |    
T  42556746 tttttaaaaggtgtgttttagcaacattcaccttaaggtgtatttaacaactttttagttatatctttgctaaaacacaccctaataaaaactagtgggt 42556647  T
Q  238 gtgttctagcaaatccatatatatata 264  Q
    || | |||||||| |||||||||||||    
T  42556646 gtatcctagcaaacccatatatatata 42556620  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #49
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 210 - 262
Target Start/End: Original strand, 184692 - 184744
Alignment:
Q  210 aaacactcccagataaaaactaatggatgtgttctagcaaatccatatatata 262  Q
    ||||||||||| ||||||| || ||| ||||||||||||||||| ||||||||    
T  184692 aaacactcccacataaaaattagtgggtgtgttctagcaaatccctatatata 184744  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #50
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 204 - 264
Target Start/End: Complemental strand, 13290494 - 13290434
Alignment:
Q  204 ttgctaaaacactcccagataaaaactaatggatgtgttctagcaaatccatatatatata 264  Q
    ||||||||||||||||| ||||||| || ||||||| |  ||||||| |||||||||||||    
T  13290494 ttgctaaaacactcccacataaaaattagtggatgtatcatagcaaaaccatatatatata 13290434  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #51
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 143 - 264
Target Start/End: Original strand, 21352393 - 21352518
Alignment:
Q  143 tttttagagggtgtgttatagcaagatacaccttaa----tatttattaactttttaattataacttgctaaaacactcccagataaaaactaatggatg 238  Q
    ||||||||  |||||||||| ||| |||||||||||    |||||||  | |||||| |||||||||| ||||||||||  | | ||||| || ||  ||    
T  21352393 tttttagaatgtgtgttataacaacatacaccttaatgtgtatttatcgaatttttagttataacttgttaaaacactcatatacaaaaattagtgagtg 21352492  T
Q  239 tgttctagcaaatccatatatatata 264  Q
    |||| ||| |||||||||||||||||    
T  21352493 tgttatagaaaatccatatatatata 21352518  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #52
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 143 - 264
Target Start/End: Complemental strand, 26630093 - 26629966
Alignment:
Q  143 tttttagagggtgtgttatagcaagatacaccttaa----tatttattaactttttaattataactt-gctaaaacactcccagataaaaactaatggat 237  Q
    |||||||| |||||||| |||||| || ||||||||    ||||||  ||||||||| ||||| ||| |||||||||| ||   |||||||||| |||||    
T  26630093 tttttagaaggtgtgttttagcaacattcaccttaaggtgtatttaacaactttttagttatatctttgctaaaacacaccttaataaaaactagtggat 26629994  T
Q  238 gtgttctagcaaa-tccatatatatata 264  Q
    || |  ||||||| ||||||||||||||    
T  26629993 gtatcatagcaaactccatatatatata 26629966  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #53
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 203 - 264
Target Start/End: Original strand, 42556848 - 42556910
Alignment:
Q  203 cttgctaaaacactcccagataaaaactaatggatgtgttctagcaaa-tccatatatatata 264  Q
    |||||||||||||||  | |||||||||| |||||||||| ||||||| | ||||||||||||    
T  42556848 cttgctaaaacactcttacataaaaactagtggatgtgttatagcaaatttcatatatatata 42556910  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #54
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 204 - 253
Target Start/End: Original strand, 27545947 - 27545996
Alignment:
Q  204 ttgctaaaacactcccagataaaaactaatggatgtgttctagcaaatcc 253  Q
    ||||||||||||| ||| ||||||||||  || |||||||||||||||||    
T  27545947 ttgctaaaacactaccacataaaaactagcgggtgtgttctagcaaatcc 27545996  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #55
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 204 - 249
Target Start/End: Original strand, 30578058 - 30578103
Alignment:
Q  204 ttgctaaaacactcccagataaaaactaatggatgtgttctagcaa 249  Q
    ||||||||||||||||| ||||||| || |||||||||| ||||||    
T  30578058 ttgctaaaacactcccacataaaaattagtggatgtgttatagcaa 30578103  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 81; Significance: 5e-38; HSPs: 50)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 81; E-Value: 5e-38
Query Start/End: Original strand, 147 - 264
Target Start/End: Complemental strand, 15881985 - 15881864
Alignment:
Q  147 tagagggtgtgttatagcaagatacaccttaa----tatttattaactttttaattataacttgctaaaacactcccagataaaaactaatggatgtgtt 242  Q
    |||| ||||||||||||||| |||||||||||    ||||||||||||||||| |||||||||||||||||||||||| |||||||||| ||| ||||||    
T  15881985 tagaaggtgtgttatagcaacatacaccttaaggtgtatttattaactttttagttataacttgctaaaacactcccacataaaaactagtgggtgtgtt 15881886  T
Q  243 ctagcaaatccatatatatata 264  Q
    ||||||||||||||||||||||    
T  15881885 ctagcaaatccatatatatata 15881864  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 154 - 264
Target Start/End: Complemental strand, 11100432 - 11100317
Alignment:
Q  154 tgtgttatagcaagatacaccttaa----tatttattaactttttaattataacttgctaaaacactcccagataaaaactaatggatgtgttctagcaa 249  Q
    ||||||||||||| |||||||||||    ||||||||||||||||| |||||||||||||||||||||||| |||||||||| ||| ||||||||| |||    
T  11100432 tgtgttatagcaacatacaccttaaggtgtatttattaactttttagttataacttgctaaaacactcccacataaaaactagtgggtgtgttctaacaa 11100333  T
Q  250 at-ccatatatatata 264  Q
    || |||||||||||||    
T  11100332 atcccatatatatata 11100317  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 143 - 264
Target Start/End: Complemental strand, 9955858 - 9955732
Alignment:
Q  143 tttttagagggtgtgttatagcaagatacaccttaa----tatttattaactttttaattataacttgctaaaacactcccagataaaaactaatggatg 238  Q
    |||||||| |||||||||||||||  ||||||||||    ||||||||||||||||| |||||||||||||||||||||||| ||||||| || ||| ||    
T  9955858 tttttagaaggtgtgttatagcaacgtacaccttaaggtgtatttattaactttttagttataacttgctaaaacactcccacataaaaattagtgggtg 9955759  T
Q  239 tgttctagcaaatc-catatatatata 264  Q
    |||||||||||||| | ||||||||||    
T  9955758 tgttctagcaaatctcgtatatatata 9955732  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 143 - 264
Target Start/End: Complemental strand, 15962800 - 15962674
Alignment:
Q  143 tttttagagggtgtgttatagcaagatacaccttaa----tatttattaactttttaattataacttgctaaaacactcccagataaaaactaatggatg 238  Q
    |||||||| ||||||||||||||| |||||||||||    ||||||||||||||||| |||||||||| ||||||||||||| ||| ||| || ||| ||    
T  15962800 tttttagaaggtgtgttatagcaacatacaccttaaggtgtatttattaactttttagttataacttgttaaaacactcccacatacaaattagtgggtg 15962701  T
Q  239 tgttctagcaaatc-catatatatata 264  Q
    |||||||||||||| ||||||||||||    
T  15962700 tgttctagcaaatctcatatatatata 15962674  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 143 - 252
Target Start/End: Complemental strand, 16599132 - 16599019
Alignment:
Q  143 tttttagagggtgtgttatagcaagatacaccttaa----tatttattaactttttaattataacttgctaaaacactcccagataaaaactaatggatg 238  Q
    |||||||| ||||||||||||||| |||||||||||    ||||||||||||||||| |||||||||| ||||||||||||| ||||||| || ||| ||    
T  16599132 tttttagaaggtgtgttatagcaacatacaccttaaggtgtatttattaactttttagttataacttgttaaaacactcccacataaaaattagtgggtg 16599033  T
Q  239 tgttctagcaaatc 252  Q
    ||||||||||||||    
T  16599032 tgttctagcaaatc 16599019  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 143 - 262
Target Start/End: Original strand, 8172010 - 8172133
Alignment:
Q  143 tttttagagggtgtgttatagcaagatacaccttaa----tatttattaactttttaattataacttgctaaaacactcccagataaaaactaatggatg 238  Q
    ||||||||  |||||||||||||| |||||||||||    |||||||||| |||||| |||||||||||||||||||||||| |||||||||| ||| ||    
T  8172010 tttttagaaagtgtgttatagcaacatacaccttaaggtgtatttattaattttttagttataacttgctaaaacactcccacataaaaactagtgggtg 8172109  T
Q  239 tgttctagcaaatccatatatata 262  Q
    |||||||| |||| | ||||||||    
T  8172110 tgttctagaaaattcgtatatata 8172133  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 147 - 253
Target Start/End: Original strand, 29646355 - 29646464
Alignment:
Q  147 tagagggtgtgttatagcaagatacaccttaa----tatttattaactttttaattataacttgctaaaacactcccagataaaaactaatggatgtgtt 242  Q
    |||| ||||||||||||||| |||||||||||    |||||||||| |||||| |||||||||||||||||||||||| ||||||| || ||| ||||||    
T  29646355 tagaaggtgtgttatagcaacatacaccttaaggtgtatttattaa-tttttagttataacttgctaaaacactcccacataaaaattagtgggtgtgtt 29646453  T
Q  243 ctagcaaatcc 253  Q
    |||||||||||    
T  29646454 ctagcaaatcc 29646464  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 147 - 249
Target Start/End: Complemental strand, 31132935 - 31132829
Alignment:
Q  147 tagagggtgtgttatagcaagatacaccttaa----tatttattaactttttaattataacttgctaaaacactcccagataaaaactaatggatgtgtt 242  Q
    |||| |||||| |||||||| |||||||||||    ||||||||||||||||| |||||||||||||||||||||||| ||||||| || ||| ||||||    
T  31132935 tagaaggtgtgctatagcaatatacaccttaaggtgtatttattaactttttagttataacttgctaaaacactcccacataaaaattagtgggtgtgtt 31132836  T
Q  243 ctagcaa 249  Q
    |||||||    
T  31132835 ctagcaa 31132829  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 143 - 246
Target Start/End: Complemental strand, 1369962 - 1369855
Alignment:
Q  143 tttttagagggtgtgttatagcaagatacaccttaa----tatttattaactttttaattataacttgctaaaacactcccagataaaaactaatggatg 238  Q
    |||||||| |||||||||| |||| |||||||||||    ||||||||||||||||| ||||||||||||||||||||| || |||||||||  ||| ||    
T  1369962 tttttagaaggtgtgttatcgcaacatacaccttaaggtgtatttattaactttttagttataacttgctaaaacactctcacataaaaacttgtgggtg 1369863  T
Q  239 tgttctag 246  Q
    ||||||||    
T  1369862 tgttctag 1369855  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 146 - 253
Target Start/End: Original strand, 24022875 - 24022986
Alignment:
Q  146 ttagagggtgtgttatagcaagatacaccttaa----tatttattaactttttaattataacttgctaaaacactcccagataaaaactaatggatgtgt 241  Q
    ||||| ||||||||||||||| |||||||||||    ||||||||||||||||| |||||||||||||||| ||||| | ||||||||   ||| |||||    
T  24022875 ttagaaggtgtgttatagcaacatacaccttaaggtgtatttattaactttttagttataacttgctaaaatactcctacataaaaacggttgggtgtgt 24022974  T
Q  242 tctagcaaatcc 253  Q
    ||||||||||||    
T  24022975 tctagcaaatcc 24022986  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 143 - 258
Target Start/End: Complemental strand, 26667928 - 26667809
Alignment:
Q  143 tttttagagggtgtgttatagcaagatacaccttaa----tatttattaactttttaattataacttgctaaaacactcccagataaaaactaatggatg 238  Q
    |||||||| ||||||||||| ||| ||||| |||||    ||||||||||||||||| |||||||||||||||||||| ||| |||||||||| | | ||    
T  26667928 tttttagaaggtgtgttataacaacatacatcttaagatgtatttattaactttttagttataacttgctaaaacacttccatataaaaactagttggtg 26667829  T
Q  239 tgttctagcaaatccatata 258  Q
    ||||||| ||||||| ||||    
T  26667828 tgttctatcaaatccctata 26667809  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 158 - 264
Target Start/End: Complemental strand, 27828355 - 27828244
Alignment:
Q  158 ttatagcaagatacaccttaa----tatttattaactttttaattataacttgctaaaacactcccagataaaaactaatggatgtgttctagcaaat-c 252  Q
    ||||||||| |||||||||||    ||||||||||||||||| |||||||||||||||||||| ||| || |||| || ||| ||||||||||||||| |    
T  27828355 ttatagcaacatacaccttaaggtgtatttattaactttttagttataacttgctaaaacacttccacattaaaattagtgggtgtgttctagcaaatcc 27828256  T
Q  253 catatatatata 264  Q
    ||||||||||||    
T  27828255 catatatatata 27828244  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 146 - 231
Target Start/End: Complemental strand, 10778003 - 10777914
Alignment:
Q  146 ttagagggtgtgttatagcaagatacaccttaa----tatttattaactttttaattataacttgctaaaacactcccagataaaaacta 231  Q
    ||||| ||||||||||||||| ||||| |||||    ||||||||||||||||| |||||||||||||||||||||||| ||||||||||    
T  10778003 ttagaaggtgtgttatagcaacatacatcttaaggtgtatttattaactttttagttataacttgctaaaacactcccacataaaaacta 10777914  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 143 - 219
Target Start/End: Complemental strand, 11210360 - 11210280
Alignment:
Q  143 tttttagagggtgtgttatagcaagatacaccttaa----tatttattaactttttaattataacttgctaaaacactccc 219  Q
    |||||||| ||||||||||||||| |||||||||||    ||||||||||||||||| |||||||||||||||||||||||    
T  11210360 tttttagaaggtgtgttatagcaacatacaccttaaggtgtatttattaactttttagttataacttgctaaaacactccc 11210280  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 203 - 264
Target Start/End: Complemental strand, 18102696 - 18102635
Alignment:
Q  203 cttgctaaaacactcccagataaaaactaatggatgtgttctagcaaatccatatatatata 264  Q
    |||||||||||||||||| |||||||||| | ||||||||||||||||||||||||||||||    
T  18102696 cttgctaaaacactcccacataaaaactagtcgatgtgttctagcaaatccatatatatata 18102635  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 179 - 263
Target Start/End: Complemental strand, 4184284 - 4184200
Alignment:
Q  179 tatttattaactttttaattataacttgctaaaacactcccagataaaaactaatggatgtgttctagcaaatccatatatatat 263  Q
    ||||||||||||||||| ||||||||| ||||||||||| || ||||||| || ||| |||||||||||||| | ||||||||||    
T  4184284 tatttattaactttttagttataacttactaaaacactctcacataaaaattagtggctgtgttctagcaaacctatatatatat 4184200  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 204 - 264
Target Start/End: Original strand, 31133066 - 31133126
Alignment:
Q  204 ttgctaaaacactcccagataaaaactaatggatgtgttctagcaaatccatatatatata 264  Q
    ||||||||||||||||| |||||||||| ||| ||||||||||||||||||||||||||||    
T  31133066 ttgctaaaacactcccacataaaaactagtgggtgtgttctagcaaatccatatatatata 31133126  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 143 - 231
Target Start/End: Complemental strand, 5187833 - 5187741
Alignment:
Q  143 tttttagagggtgtgttatagcaagatacaccttaa----tatttattaactttttaattataacttgctaaaacactcccagataaaaacta 231  Q
    |||||| | ||||||||||||||| |||||||||||    ||||||||||||||||| |||||||||| ||||||||||| | ||||||||||    
T  5187833 tttttaaaaggtgtgttatagcaacatacaccttaaggtgtatttattaactttttagttataacttgttaaaacactcctacataaaaacta 5187741  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 203 - 264
Target Start/End: Original strand, 30525539 - 30525600
Alignment:
Q  203 cttgctaaaacactcccagataaaaactaatggatgtgttctagcaaatccatatatatata 264  Q
    |||||||||||||||||| |||||||||||||| |||||||||||||| || ||||||||||    
T  30525539 cttgctaaaacactcccacataaaaactaatgggtgtgttctagcaaacccctatatatata 30525600  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 203 - 264
Target Start/End: Complemental strand, 33730529 - 33730468
Alignment:
Q  203 cttgctaaaacactcccagataaaaactaatggatgtgttctagcaaatccatatatatata 264  Q
    |||||||||||||||||| |||||||||| ||| ||||||||||||||||| ||||||||||    
T  33730529 cttgctaaaacactcccacataaaaactagtgggtgtgttctagcaaatccctatatatata 33730468  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 203 - 264
Target Start/End: Complemental strand, 4838283 - 4838221
Alignment:
Q  203 cttgctaaaacactcccagataaaaactaatggatgtgttctagcaaatcc-atatatatata 264  Q
    |||||||||||||||||| |||||||||| ||| ||||||||||||||||| |||||||||||    
T  4838283 cttgctaaaacactcccacataaaaactagtgggtgtgttctagcaaatcctatatatatata 4838221  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 179 - 253
Target Start/End: Original strand, 9406753 - 9406827
Alignment:
Q  179 tatttattaactttttaattataacttgctaaaacactcccagataaaaactaatggatgtgttctagcaaatcc 253  Q
    ||||||| ||||||||| |||||||||||||||||||||| | | ||||| |||||||||| |||||| ||||||    
T  9406753 tatttatcaactttttagttataacttgctaaaacactcctacacaaaaattaatggatgtattctaggaaatcc 9406827  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 203 - 264
Target Start/End: Complemental strand, 18154552 - 18154490
Alignment:
Q  203 cttgctaaaacactcccagataaaaactaatggatgtgttctagcaaatc-catatatatata 264  Q
    |||||||||||||||||| |||||||||| ||| |||||||||||||||| ||||||||||||    
T  18154552 cttgctaaaacactcccacataaaaactagtgggtgtgttctagcaaatctcatatatatata 18154490  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 154 - 228
Target Start/End: Original strand, 10196610 - 10196688
Alignment:
Q  154 tgtgttatagcaagatacaccttaa----tatttattaactttttaattataacttgctaaaacactcccagataaaaa 228  Q
    ||||||||||||| |||||||||||    ||||||||||||||||| |||||||||| |||||||||| || |||||||    
T  10196610 tgtgttatagcaacatacaccttaaggtgtatttattaactttttagttataacttgttaaaacactctcacataaaaa 10196688  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 204 - 264
Target Start/End: Complemental strand, 8171884 - 8171825
Alignment:
Q  204 ttgctaaaacactcccagataaaaactaatggatgtgttctagcaaatccatatatatata 264  Q
    ||||||||||||||||| ||||||| || |||||||||||||||||| |||||||||||||    
T  8171884 ttgctaaaacactcccacataaaaattagtggatgtgttctagcaaa-ccatatatatata 8171825  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 190 - 250
Target Start/End: Complemental strand, 20755418 - 20755358
Alignment:
Q  190 tttttaattataacttgctaaaacactcccagataaaaactaatggatgtgttctagcaaa 250  Q
    |||||| |||||||||| ||||||||||||  |||||||||| ||| ||||||||||||||    
T  20755418 tttttagttataacttgttaaaacactcccgcataaaaactagtgggtgtgttctagcaaa 20755358  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 179 - 250
Target Start/End: Complemental strand, 26211302 - 26211231
Alignment:
Q  179 tatttattaactttttaattataacttgctaaaacactcccagataaaaactaatggatgtgttctagcaaa 250  Q
    ||||||| |||||||||  |||||||| |||||||||||||| |||||||||| | | | ||||||||||||    
T  26211302 tatttatcaactttttagctataacttactaaaacactcccacataaaaactagtaggtatgttctagcaaa 26211231  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 153 - 264
Target Start/End: Original strand, 35002030 - 35002137
Alignment:
Q  153 gtgtgttatagcaagatacaccttaa----tatttattaactttttaattataacttgctaaaacactcccagataaaaactaatggatgtgttctagca 248  Q
    |||||||||||||| |||||||||||    ||||||||||||||||| ||||||||         ||||||| |||||||| ||||| |||| |||||||    
T  35002030 gtgtgttatagcaacatacaccttaaggtgtatttattaactttttagttataact---------actcccacataaaaaccaatgggtgtgctctagca 35002120  T
Q  249 aat-ccatatatatata 264  Q
    ||| |||||||||||||    
T  35002121 aatcccatatatatata 35002137  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 204 - 264
Target Start/End: Original strand, 4184449 - 4184511
Alignment:
Q  204 ttgctaaaacactcccagataaaaa-ctaatggatgtgttctagcaaatc-catatatatata 264  Q
    ||||||||||||||||| ||||||| ||| |||||||||||||||||| | ||||||||||||    
T  4184449 ttgctaaaacactcccacataaaaacctagtggatgtgttctagcaaacctcatatatatata 4184511  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 204 - 264
Target Start/End: Original strand, 5187958 - 5188019
Alignment:
Q  204 ttgctaaaacactcccagataaaaactaatggatgtgttctagcaaa-tccatatatatata 264  Q
    ||||||||||||| ||| ||||||| |||||| |||||||||| ||| ||||||||||||||    
T  5187958 ttgctaaaacacttccacataaaaattaatgggtgtgttctagtaaactccatatatatata 5188019  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 203 - 252
Target Start/End: Original strand, 11010101 - 11010150
Alignment:
Q  203 cttgctaaaacactcccagataaaaactaatggatgtgttctagcaaatc 252  Q
    |||||||||||||||||| |||||||||| ||| |||||| |||||||||    
T  11010101 cttgctaaaacactcccatataaaaactagtgggtgtgttatagcaaatc 11010150  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 203 - 264
Target Start/End: Complemental strand, 11098901 - 11098840
Alignment:
Q  203 cttgctaaaacactcccagataaaaactaatggatgtgttctagcaaatccatatatatata 264  Q
    |||||||||| ||||  | |||||||||  |||||||||||||||||||| |||||||||||    
T  11098901 cttgctaaaatactcggaaataaaaactggtggatgtgttctagcaaatcaatatatatata 11098840  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #33
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 208 - 264
Target Start/End: Original strand, 15882079 - 15882136
Alignment:
Q  208 taaaacactcccagataaaaactaatggatgtgttctagcaaa-tccatatatatata 264  Q
    ||||||||||||| |||||||||| ||| ||||||||||||||  |||||||||||||    
T  15882079 taaaacactcccacataaaaactagtgggtgtgttctagcaaaccccatatatatata 15882136  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #34
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 208 - 261
Target Start/End: Complemental strand, 29646220 - 29646167
Alignment:
Q  208 taaaacactcccagataaaaactaatggatgtgttctagcaaatccatatatat 261  Q
    ||||||||||||| |||||||||| ||| |||||||||||||| || |||||||    
T  29646220 taaaacactcccacataaaaactagtgggtgtgttctagcaaacccctatatat 29646167  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #35
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 204 - 264
Target Start/End: Original strand, 15718405 - 15718465
Alignment:
Q  204 ttgctaaaacactcccagataaaaactaatggatgtgttctagcaaatccatatatatata 264  Q
    |||||| |||||||||| |||||||||| ||| ||| | |||||||| |||||||||||||    
T  15718405 ttgctacaacactcccacataaaaactagtgggtgtatcctagcaaacccatatatatata 15718465  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #36
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 208 - 264
Target Start/End: Original strand, 16599263 - 16599319
Alignment:
Q  208 taaaacactcccagataaaaactaatggatgtgttctagcaaatccatatatatata 264  Q
    ||||||||||||| |||||||||| ||  |||||||||||||| || ||||||||||    
T  16599263 taaaacactcccacataaaaactagtgagtgtgttctagcaaacccctatatatata 16599319  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #37
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 207 - 250
Target Start/End: Original strand, 20755548 - 20755591
Alignment:
Q  207 ctaaaacactcccagataaaaactaatggatgtgttctagcaaa 250  Q
    |||||||||||||| |||||||||| ||| ||||||||||||||    
T  20755548 ctaaaacactcccacataaaaactagtgggtgtgttctagcaaa 20755591  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #38
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 204 - 259
Target Start/End: Original strand, 27828501 - 27828556
Alignment:
Q  204 ttgctaaaacactcccagataaaaactaatggatgtgttctagcaaatccatatat 259  Q
    ||||||||||||||||| |||||| ||| ||| |||||||||||||| || |||||    
T  27828501 ttgctaaaacactcccacataaaagctagtgggtgtgttctagcaaacccctatat 27828556  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #39
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 204 - 250
Target Start/End: Original strand, 1370088 - 1370134
Alignment:
Q  204 ttgctaaaacactcccagataaaaactaatggatgtgttctagcaaa 250  Q
    |||||||||||||| || |||||||||| ||| ||||||||||||||    
T  1370088 ttgctaaaacactctcacataaaaactagtgggtgtgttctagcaaa 1370134  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #40
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 203 - 264
Target Start/End: Complemental strand, 9406590 - 9406528
Alignment:
Q  203 cttgctaaaacactcccagataaaaactaatggatgtgttctagcaaatc-catatatatata 264  Q
    |||||||||||||| ||  ||||||| ||||||||||| | ||||||||| ||||||||||||    
T  9406590 cttgctaaaacactaccgcataaaaattaatggatgtgctttagcaaatctcatatatatata 9406528  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #41
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 204 - 250
Target Start/End: Original strand, 11100570 - 11100616
Alignment:
Q  204 ttgctaaaacactcccagataaaaactaatggatgtgttctagcaaa 250  Q
    ||||||||||||||||| |||||||||| | |||||| |||||||||    
T  11100570 ttgctaaaacactcccacataaaaactagtagatgtgatctagcaaa 11100616  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #42
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 204 - 264
Target Start/End: Original strand, 15962927 - 15962989
Alignment:
Q  204 ttgctaaaacactcccagat-aaaaactaatggatgtgttctagcaaa-tccatatatatata 264  Q
    ||||||||||||||||| || |||||||| ||| ||||||||||||||  |||||||||||||    
T  15962927 ttgctaaaacactcccacataaaaaactagtgggtgtgttctagcaaaccccatatatatata 15962989  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #43
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 207 - 264
Target Start/End: Complemental strand, 32194219 - 32194161
Alignment:
Q  207 ctaaaacactcccagataaaaactaatggatgtgttctagcaaa-tccatatatatata 264  Q
    |||||||||| ||| || ||||||| |||||||||||||||||| || |||||||||||    
T  32194219 ctaaaacacttccacatgaaaactagtggatgtgttctagcaaattctatatatatata 32194161  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #44
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 203 - 264
Target Start/End: Original strand, 4898313 - 4898374
Alignment:
Q  203 cttgctaaaacactcccagataaaaactaatggatgtgttctagcaaatccatatatatata 264  Q
    |||||||||| ||||||| ||||||| || ||| ||||||||| |||||  |||||||||||    
T  4898313 cttgctaaaatactcccacataaaaagtagtgggtgtgttctaacaaatatatatatatata 4898374  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #45
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 204 - 264
Target Start/End: Original strand, 10315393 - 10315454
Alignment:
Q  204 ttgctaaaacactcccagataaaaactaatggatgtgttctagcaaatcc-atatatatata 264  Q
    ||||||||||||||||| ||||||||||  || |||||||||||| | || |||||||||||    
T  10315393 ttgctaaaacactcccacataaaaactagcgggtgtgttctagcataccctatatatatata 10315454  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #46
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 143 - 264
Target Start/End: Original strand, 11742452 - 11742577
Alignment:
Q  143 tttttagagggtgtgttatagcaagatacaccttaa----tatttattaactttttaattataac-ttgctaaaacactcccagataaaaactaatggat 237  Q
    |||||||| |||||||| |||||| |||||||||||    ||||||  ||||||||| ||||| | ||||||||| || ||   ||||||| |||||| |    
T  11742452 tttttagaaggtgtgttttagcaaaatacaccttaaaatgtatttaacaactttttagttatatctttgctaaaatacaccttaataaaaattaatgggt 11742551  T
Q  238 gtgttctagcaaatccatatatatata 264  Q
    || | |||||||| |||||||||||||    
T  11742552 gtatcctagcaaa-ccatatatatata 11742577  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #47
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 203 - 252
Target Start/End: Complemental strand, 15718216 - 15718167
Alignment:
Q  203 cttgctaaaacactcccagataaaaactaatggatgtgttctagcaaatc 252  Q
    |||||||||||| ||||| |||||||||| ||  ||||||||||||||||    
T  15718216 cttgctaaaacattcccacataaaaactattgagtgtgttctagcaaatc 15718167  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #48
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 204 - 262
Target Start/End: Complemental strand, 27902323 - 27902264
Alignment:
Q  204 ttgctaaaacactcccagataaaa--actaatggatgtgttctagcaaatccatatatata 262  Q
    ||||||||||||||||| ||||||  |||| ||| ||||||||||||||| ||||||||||    
T  27902323 ttgctaaaacactcccacataaaaacactagtgggtgtgttctagcaaat-catatatata 27902264  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #49
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 203 - 250
Target Start/End: Original strand, 26211464 - 26211512
Alignment:
Q  203 cttgctaaaacactcccagat-aaaaactaatggatgtgttctagcaaa 250  Q
    |||||||||||||||||| || |||||||| || |||||||||||||||    
T  26211464 cttgctaaaacactcccatataaaaaactagtgaatgtgttctagcaaa 26211512  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #50
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 209 - 264
Target Start/End: Original strand, 27902349 - 27902405
Alignment:
Q  209 aaaacactcccagataaaaactaatggatgtgttctagcaaat-ccatatatatata 264  Q
    |||||||||||| |||||||||| ||| || ||| |||||||| |||||||||||||    
T  27902349 aaaacactcccacataaaaactagtgggtgcgttatagcaaatcccatatatatata 27902405  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 81; Significance: 5e-38; HSPs: 63)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 81; E-Value: 5e-38
Query Start/End: Original strand, 143 - 264
Target Start/End: Original strand, 4736915 - 4737040
Alignment:
Q  143 tttttagagggtgtgttatagcaagatacaccttaa----tatttattaactttttaattataacttgctaaaacactcccagataaaaactaatggatg 238  Q
    ||||||||  |||||||||||||| |||||||||||    |||||||||||||||||||||||||||||||||||||||||| |||||||||| ||| ||    
T  4736915 tttttagaatgtgtgttatagcaacatacaccttaaggtgtatttattaactttttaattataacttgctaaaacactcccacataaaaactagtgggtg 4737014  T
Q  239 tgttctagcaaatccatatatatata 264  Q
    ||||||||||||||| ||||||||||    
T  4737015 tgttctagcaaatccctatatatata 4737040  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 143 - 264
Target Start/End: Original strand, 26906018 - 26906143
Alignment:
Q  143 tttttagagggtgtgttatagcaagatacaccttaa----tatttattaactttttaattataacttgctaaaacactcccagataaaaactaatggatg 238  Q
    |||||||| ||||||||||||||| |||||||||||    |||||||||| |||||| |||||||||| ||||||||||||| |||||||||| ||| ||    
T  26906018 tttttagaaggtgtgttatagcaacatacaccttaaggtgtatttattaattttttagttataacttgttaaaacactcccacataaaaactagtgggtg 26906117  T
Q  239 tgttctagcaaatccatatatatata 264  Q
    ||||||||||||||||||||||||||    
T  26906118 tgttctagcaaatccatatatatata 26906143  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 143 - 264
Target Start/End: Complemental strand, 29302167 - 29302042
Alignment:
Q  143 tttttagagggtgtgttatagcaagatacaccttaa----tatttattaactttttaattataacttgctaaaacactcccagataaaaactaatggatg 238  Q
    |||||||| ||||||||||||||| |||||||||||    ||||||||||||||||| |||||||||||||||||||||||| ||||||| || ||| ||    
T  29302167 tttttagaaggtgtgttatagcaacatacaccttaaggtgtatttattaactttttagttataacttgctaaaacactcccacataaaaattagtgggtg 29302068  T
Q  239 tgttctagcaaatccatatatatata 264  Q
    |||||||||||| |||||||||||||    
T  29302067 tgttctagcaaacccatatatatata 29302042  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 76; E-Value: 5e-35
Query Start/End: Original strand, 143 - 264
Target Start/End: Complemental strand, 17209939 - 17209812
Alignment:
Q  143 tttttagagggtgtgttatagcaagatacaccttaa----tatttattaact--ttttaattataacttgctaaaacactcccagataaaaactaatgga 236  Q
    |||||||| ||||||||||||||| |||||||||||    ||||||||||||  ||||| ||| |||||||||||||||||| | |||||||||||||||    
T  17209939 tttttagaaggtgtgttatagcaacatacaccttaaggtgtatttattaactctttttagttacaacttgctaaaacactcctacataaaaactaatgga 17209840  T
Q  237 tgtgttctagcaaatccatatatatata 264  Q
    ||||||||||||||||||||||||||||    
T  17209839 tgtgttctagcaaatccatatatatata 17209812  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 73; E-Value: 3e-33
Query Start/End: Original strand, 147 - 264
Target Start/End: Complemental strand, 30687973 - 30687852
Alignment:
Q  147 tagagggtgtgttatagcaagatacaccttaa----tatttattaactttttaattataacttgctaaaacactcccagataaaaactaatggatgtgtt 242  Q
    |||| ||||||||||||||| |||||||||||    ||||||||||||||||| |||||||||||||||||||||||| ||||||| || ||| ||||||    
T  30687973 tagaaggtgtgttatagcaacatacaccttaaggtgtatttattaactttttagttataacttgctaaaacactcccacataaaaattagtgggtgtgtt 30687874  T
Q  243 ctagcaaatccatatatatata 264  Q
    |||||||| |||||||||||||    
T  30687873 ctagcaaacccatatatatata 30687852  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 73; E-Value: 3e-33
Query Start/End: Original strand, 147 - 264
Target Start/End: Original strand, 37249430 - 37249551
Alignment:
Q  147 tagagggtgtgttatagcaagatacaccttaa----tatttattaactttttaattataacttgctaaaacactcccagataaaaactaatggatgtgtt 242  Q
    |||| ||||||||||||||| |||||||||||    ||||||||||||||||| |||||||||||||||||||||||| ||||||| || ||| ||||||    
T  37249430 tagaaggtgtgttatagcaacatacaccttaaggtgtatttattaactttttagttataacttgctaaaacactcccacataaaaattagtgggtgtgtt 37249529  T
Q  243 ctagcaaatccatatatatata 264  Q
    ||||||||||| ||||||||||    
T  37249530 ctagcaaatccctatatatata 37249551  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 143 - 263
Target Start/End: Original strand, 1807515 - 1807639
Alignment:
Q  143 tttttagagggtgtgttatagcaagatacaccttaa----tatttattaactttttaattataacttgctaaaacactcccagataaaaactaatggatg 238  Q
    |||||||| ||||||||||||||| |||||||||||    ||||||||||||||||| ||||||||||||||||||||| ||  ||||||||||||| ||    
T  1807515 tttttagaaggtgtgttatagcaacatacaccttaagatatatttattaactttttagttataacttgctaaaacactctcatgtaaaaactaatgggtg 1807614  T
Q  239 tgttctagcaaatccatatatatat 263  Q
    ||||||||||||| | |||||||||    
T  1807615 tgttctagcaaatacctatatatat 1807639  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 69; E-Value: 7e-31
Query Start/End: Original strand, 143 - 264
Target Start/End: Original strand, 15809095 - 15809219
Alignment:
Q  143 tttttagagggtgtgttatagcaagatacaccttaa----tatttattaactttttaattataacttgctaaaacactcccagataaaaactaatggatg 238  Q
    |||||||| ||||||||||||||| |||||||||||    ||||||||||||||| | || ||||||||||||||||||||| |||||||||| ||||||    
T  15809095 tttttagaaggtgtgttatagcaacatacaccttaaggtgtatttattaacttttaagttgtaacttgctaaaacactcccacataaaaactagtggatg 15809194  T
Q  239 tgttctagcaaatccatatatatata 264  Q
    |||||||||||||  |||||||||||    
T  15809195 tgttctagcaaat-tatatatatata 15809219  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 154 - 264
Target Start/End: Original strand, 1921595 - 1921709
Alignment:
Q  154 tgtgttatagcaagatacaccttaa----tatttattaactttttaattataacttgctaaaacactcccagataaaaactaatggatgtgttctagcaa 249  Q
    ||||||||| ||| |||||||||||    |||||||||| |||||| |||||||||||||||||||||||| |||||||||| | | |||||||||||||    
T  1921595 tgtgttataacaatatacaccttaaggtgtatttattaattttttagttataacttgctaaaacactcccacataaaaactagtaggtgtgttctagcaa 1921694  T
Q  250 atccatatatatata 264  Q
    |||||||||||||||    
T  1921695 atccatatatatata 1921709  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 143 - 253
Target Start/End: Complemental strand, 17559287 - 17559173
Alignment:
Q  143 tttttagagggtgtgttatagcaagatacaccttaa----tatttattaactttttaattataacttgctaaaacactcccagataaaaactaatggatg 238  Q
    |||||||| ||||||||||||||| |||||||||||    ||||||||||||||||| |||||||||||||||||||||||| |||||||  | ||| ||    
T  17559287 tttttagaaggtgtgttatagcaacatacaccttaagatgtatttattaactttttagttataacttgctaaaacactcccacataaaaatcagtgggtg 17559188  T
Q  239 tgttctagcaaatcc 253  Q
    |||| ||||||||||    
T  17559187 tgttatagcaaatcc 17559173  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 143 - 252
Target Start/End: Complemental strand, 30667644 - 30667531
Alignment:
Q  143 tttttagagggtgtgttatagcaagatacaccttaa----tatttattaactttttaattataacttgctaaaacactcccagataaaaactaatggatg 238  Q
    |||||||| ||||||||||||||| ||||| ||||     ||||||||||||||||| | |||||||||||||||||||||| |||||||||||||| ||    
T  30667644 tttttagaaggtgtgttatagcaacatacatcttatggtgtatttattaactttttagtcataacttgctaaaacactcccacataaaaactaatgggtg 30667545  T
Q  239 tgttctagcaaatc 252  Q
    ||||||| ||||||    
T  30667544 tgttctaacaaatc 30667531  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 59; E-Value: 7e-25
Query Start/End: Original strand, 145 - 252
Target Start/End: Complemental strand, 1951494 - 1951383
Alignment:
Q  145 tttagagggtgtgttatagcaagatacaccttaa----tatttattaactttttaattataacttgctaaaacactcccagataaaaactaatggatgtg 240  Q
    |||||| ||||||||||||||| |||||||||||    ||||||||||||||||| |||||| ||||||||||||||||| |||||||||| ||| |||     
T  1951494 tttagaaggtgtgttatagcaacatacaccttaaggtgtatttattaactttttagttataatttgctaaaacactcccacataaaaactagtgggtgta 1951395  T
Q  241 ttctagcaaatc 252  Q
    || |||||||||    
T  1951394 ttttagcaaatc 1951383  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 59; E-Value: 7e-25
Query Start/End: Original strand, 143 - 253
Target Start/End: Original strand, 37282302 - 37282417
Alignment:
Q  143 tttttagagggtgtgttatagcaagatacaccttaa----tatttattaactttttaa-ttataacttgctaaaacactcccagataaaaactaatggat 237  Q
    |||||||| ||||||||||||||| |||||||||||    ||||| |||||||||| | |||||||||||||||||||||||| |||||||||| ||| |    
T  37282302 tttttagaaggtgtgttatagcaacatacaccttaaggtgtatttgttaacttttttagttataacttgctaaaacactcccacataaaaactagtgggt 37282401  T
Q  238 gtgttctagcaaatcc 253  Q
    ||||| ||||||||||    
T  37282402 gtgttgtagcaaatcc 37282417  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 143 - 264
Target Start/End: Original strand, 33282379 - 33282505
Alignment:
Q  143 tttttagagggtgtgttatagcaagatacaccttaa----tatttattaactttttaattataacttgctaaaacactcccagataaaaactaatggatg 238  Q
    |||||||| ||||||||||| ||| ||||| |||||    ||||||||||||||||| |||||||||||||||||||||||| ||||||| || ||| |     
T  33282379 tttttagaaggtgtgttataacaacatacatcttaaagtgtatttattaactttttagttataacttgctaaaacactcccacataaaaattagtgggta 33282478  T
Q  239 tgttctagcaaa-tccatatatatata 264  Q
    |||||||||||| || |||||||||||    
T  33282479 tgttctagcaaattctatatatatata 33282505  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 143 - 263
Target Start/End: Original strand, 17605164 - 17605288
Alignment:
Q  143 tttttagagggtgtgttatagcaagatacaccttaa----tatttattaactttttaattataacttgctaaaacactcccagataaaaactaatggatg 238  Q
    |||||||| ||||||||||||||| ||| |||||||    |||||||||| |||||| |||||||||||||||||||||| | |||||||||| | | |     
T  17605164 tttttagaaggtgtgttatagcaacatataccttaagatgtatttattaaatttttagttataacttgctaaaacactcctacataaaaactagtaggta 17605263  T
Q  239 tgttctagcaaatccatatatatat 263  Q
    ||||||| ||||||| |||||||||    
T  17605264 tgttctaacaaatccctatatatat 17605288  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 153 - 264
Target Start/End: Original strand, 7014636 - 7014751
Alignment:
Q  153 gtgtgttatagcaagatacaccttaa----tatttattaactttttaattataacttgctaaaacactcccagataaaaactaatggatgtgttctagca 248  Q
    |||||||||||||| |||||||||||    ||||||||||||||||| ||| | ||||||||||||||| || |||||||||| |   ||||||||||||    
T  7014636 gtgtgttatagcaacatacaccttaaggtgtatttattaactttttagttagagcttgctaaaacactctcacataaaaactagtatgtgtgttctagca 7014735  T
Q  249 aatccatatatatata 264  Q
    ||||| ||||||||||    
T  7014736 aatccctatatatata 7014751  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 143 - 260
Target Start/End: Original strand, 37468657 - 37468778
Alignment:
Q  143 tttttagagggtgtgttatagcaagatacaccttaa----tatttattaactttttaattataacttgctaaaacactcccagataaaaactaatggatg 238  Q
    |||||||| |||||||||||| || ||||| || ||    ||||||| ||||||||| |||||||||||||||||||||||| |||||||||| ||| ||    
T  37468657 tttttagaaggtgtgttatagaaacatacaactcaaggtgtatttatcaactttttagttataacttgctaaaacactcccacataaaaactagtgggtg 37468756  T
Q  239 tgttctagcaaatccatatata 260  Q
    |||| ||||| |||| ||||||    
T  37468757 tgttttagcatatccctatata 37468778  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 146 - 253
Target Start/End: Complemental strand, 22282272 - 22282161
Alignment:
Q  146 ttagagggtgtgttatagcaagatacaccttaa----tatttattaactttttaattataacttgctaaaacactcccagataaaaactaatggatgtgt 241  Q
    ||||| ||||||||||||||  |||||||||||    ||||||||||||||||| |||||||||||||||| ||||||| |||||||    ||| |||||    
T  22282272 ttagaaggtgtgttatagcagcatacaccttaaggtgtatttattaactttttagttataacttgctaaaatactcccacataaaaatggttgggtgtgt 22282173  T
Q  242 tctagcaaatcc 253  Q
    ||||||||||||    
T  22282172 tctagcaaatcc 22282161  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 188 - 264
Target Start/End: Complemental strand, 22213139 - 22213064
Alignment:
Q  188 actttttaattataacttgctaaaacactcccagataaaaactaatggatgtgttctagcaaatccatatatatata 264  Q
    ||||||||||||||| ||||||||||||| ||| |||||||||| |||||||||||||||||||  |||||||||||    
T  22213139 actttttaattataaattgctaaaacacttccacataaaaactagtggatgtgttctagcaaat-tatatatatata 22213064  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 198 - 264
Target Start/End: Complemental strand, 2528768 - 2528701
Alignment:
Q  198 tataacttgctaaaacactcccagataaaaactaatggatgtgttctagcaaatcc-atatatatata 264  Q
    |||| |||||||||||||||||| |||||||||| ||||||||||||||||||||| |||||||||||    
T  2528768 tataccttgctaaaacactcccacataaaaactagtggatgtgttctagcaaatcctatatatatata 2528701  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 146 - 264
Target Start/End: Original strand, 11448860 - 11448983
Alignment:
Q  146 ttagagggtgtgttatagcaagatacaccttaa----tatttattaactttttaattataacttgctaaaacactcccagat-aaaaactaatggatgtg 240  Q
    ||||| ||||||||||| ||| |||||||||||    |||||||||| |||||| ||||||||||||||||||||  || || ||||| || ||| ||||    
T  11448860 ttagaaggtgtgttataacaacatacaccttaaggtgtatttattaattttttagttataacttgctaaaacactatcacataaaaaattagtgggtgtg 11448959  T
Q  241 ttctagcaaatccatatatatata 264  Q
    ||||||||||| | ||||||||||    
T  11448960 ttctagcaaattcctatatatata 11448983  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 143 - 253
Target Start/End: Original strand, 33026351 - 33026466
Alignment:
Q  143 tttttagagggtgtgttatagcaagatacaccttaa----tatttattaactttttaa-ttataacttgctaaaacactcccagataaaaactaatggat 237  Q
    |||||||| ||||||||||||||| |||||| ||||    |||||||||||||||| | || ||||||| ||||||||||||| || ||||||| | | |    
T  33026351 tttttagaaggtgtgttatagcaacatacacattaagatgtatttattaacttttttagttgtaacttgttaaaacactcccacatgaaaactagtaggt 33026450  T
Q  238 gtgttctagcaaatcc 253  Q
    ||||||||||||||||    
T  33026451 gtgttctagcaaatcc 33026466  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 203 - 263
Target Start/End: Complemental strand, 3038883 - 3038823
Alignment:
Q  203 cttgctaaaacactcccagataaaaactaatggatgtgttctagcaaatccatatatatat 263  Q
    |||||||||||||||||| |||||||||| ||| | |||||||||||||||||||||||||    
T  3038883 cttgctaaaacactcccacataaaaactagtgggtatgttctagcaaatccatatatatat 3038823  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 204 - 264
Target Start/End: Complemental strand, 4736792 - 4736732
Alignment:
Q  204 ttgctaaaacactcccagataaaaactaatggatgtgttctagcaaatccatatatatata 264  Q
    ||||||||||||||||| |||||||||||||| |||||||||||||| || ||||||||||    
T  4736792 ttgctaaaacactcccacataaaaactaatgggtgtgttctagcaaacccctatatatata 4736732  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 204 - 264
Target Start/End: Original strand, 29302294 - 29302354
Alignment:
Q  204 ttgctaaaacactcccagataaaaactaatggatgtgttctagcaaatccatatatatata 264  Q
    ||||||||||||||||| |||||||||| ||| |||||||||||||| |||||||||||||    
T  29302294 ttgctaaaacactcccacataaaaactagtgggtgtgttctagcaaacccatatatatata 29302354  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 180 - 264
Target Start/End: Complemental strand, 33833087 - 33833003
Alignment:
Q  180 atttattaactttttaattataacttgctaaaacactcccagataaaaactaatggatgtgttctagcaaatccatatatatata 264  Q
    |||||||||||||||| |||||| ||||||||||||||||| ||||||| || ||  ||| | |||||||| |||||||||||||    
T  33833087 atttattaactttttagttataatttgctaaaacactcccacataaaaattagtgcgtgtatcctagcaaacccatatatatata 33833003  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 203 - 264
Target Start/End: Complemental strand, 6436419 - 6436357
Alignment:
Q  203 cttgctaaaacactcccagataaaaactaatggatgtgttctagcaaatc-catatatatata 264  Q
    |||||||||||||||||| |||||||||| ||| |||||||||||||||| ||||||||||||    
T  6436419 cttgctaaaacactcccacataaaaactagtgggtgtgttctagcaaatctcatatatatata 6436357  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 203 - 267
Target Start/End: Complemental strand, 10951051 - 10950986
Alignment:
Q  203 cttgctaaaacactcccagataaaaactaatggatgtgttctagcaaatc-catatatatataata 267  Q
    |||||||||||||||||| || ||||||| ||||||||||||| |||||| |||||||||||||||    
T  10951051 cttgctaaaacactcccacattaaaactagtggatgtgttctaccaaatctcatatatatataata 10950986  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 200 - 264
Target Start/End: Original strand, 25912225 - 25912290
Alignment:
Q  200 taacttgctaaaacactcccagataaaaactaatggatgtgttctagcaaatcc-atatatatata 264  Q
    ||||||||||||||||||||| |||||||||| | | ||||||||||||||||| |||||||||||    
T  25912225 taacttgctaaaacactcccacataaaaactagtaggtgtgttctagcaaatcctatatatatata 25912290  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 204 - 264
Target Start/End: Complemental strand, 31752441 - 31752380
Alignment:
Q  204 ttgctaaaacactcccagataaaaactaatggatgtgttctagcaaatc-catatatatata 264  Q
    ||||||||||||||||| |||||||||| ||| |||||||||||||||| ||||||||||||    
T  31752441 ttgctaaaacactcccacataaaaactagtggttgtgttctagcaaatctcatatatatata 31752380  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 204 - 264
Target Start/End: Original strand, 40234261 - 40234322
Alignment:
Q  204 ttgctaaaacactcccagataaaaactaatggatgtgttctagcaaat-ccatatatatata 264  Q
    ||||||||||||||||| |||||||||| ||| ||||||||||||||| |||||||||||||    
T  40234261 ttgctaaaacactcccacataaaaactagtgggtgtgttctagcaaatcccatatatatata 40234322  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 204 - 264
Target Start/End: Complemental strand, 30486107 - 30486047
Alignment:
Q  204 ttgctaaaacactcccagataaaaactaatggatgtgttctagcaaatccatatatatata 264  Q
    ||||||||||||||||| |||||||||| ||| |||||||||||||| || ||||||||||    
T  30486107 ttgctaaaacactcccacataaaaactagtgggtgtgttctagcaaacccctatatatata 30486047  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 200 - 264
Target Start/End: Original strand, 22701926 - 22701992
Alignment:
Q  200 taacttgctaaaacactcccagataaaa-actaatggatgtgttctagcaaatc-catatatatata 264  Q
    ||||||||||||||||||||| |||||| |||| ||| |||||||||||||||| ||||||||||||    
T  22701926 taacttgctaaaacactcccacataaaacactagtgggtgtgttctagcaaatctcatatatatata 22701992  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 200 - 253
Target Start/End: Complemental strand, 857908 - 857855
Alignment:
Q  200 taacttgctaaaacactcccagataaaaactaatggatgtgttctagcaaatcc 253  Q
    ||||||||||||||||||||| ||| |||||| ||| |||||||||||||||||    
T  857908 taacttgctaaaacactcccacatacaaactagtgggtgtgttctagcaaatcc 857855  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 143 - 264
Target Start/End: Complemental strand, 11351882 - 11351757
Alignment:
Q  143 tttttagagggtgtgttatagcaagatacaccttaa----tatttattaactttttaattataactt-gctaaaacactcccagataaaaactaatggat 237  Q
    |||||||| |||||||| |||||| || ||||||||    |||| | |||||||||||||||| ||| ||||||||||||||| |||||||||| | |||    
T  11351882 tttttagaaggtgtgttttagcaacattcaccttaaggtgtattcaataactttttaattatatctttgctaaaacactcccacataaaaactagtagat 11351783  T
Q  238 gtgttctagcaaatccatatatatata 264  Q
    || | ||| ||||  ||||||||||||    
T  11351782 gtatcctaacaaa-acatatatatata 11351757  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 203 - 264
Target Start/End: Complemental strand, 14369763 - 14369702
Alignment:
Q  203 cttgctaaaacactcccagataaaaactaatggatgtgttctagcaaatccatatatatata 264  Q
    |||||||||||||||||| || |||||||  || ||| ||||||||||||||||||||||||    
T  14369763 cttgctaaaacactcccacatgaaaactagcgggtgtcttctagcaaatccatatatatata 14369702  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 204 - 264
Target Start/End: Original strand, 33833243 - 33833301
Alignment:
Q  204 ttgctaaaacactcccagataaaaactaatggatgtgttctagcaaatccatatatatata 264  Q
    ||||||||||||||||| |||||||||| ||| ||||||||||||||  ||||||||||||    
T  33833243 ttgctaaaacactcccacataaaaactagtgggtgtgttctagcaaa--catatatatata 33833301  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 204 - 263
Target Start/End: Complemental strand, 7014523 - 7014463
Alignment:
Q  204 ttgctaaaacactcccagataaaaactaatggatgtgttctagcaaatcc-atatatatat 263  Q
    ||||||||||||||||| ||||||| |||||| |||||||||||||| || ||||||||||    
T  7014523 ttgctaaaacactcccacataaaaattaatgggtgtgttctagcaaaccctatatatatat 7014463  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 204 - 264
Target Start/End: Complemental strand, 15808968 - 15808908
Alignment:
Q  204 ttgctaaaacactcccagataaaaactaatggatgtgttctagcaaatccatatatatata 264  Q
    ||||||||||||||||| ||||||| || ||| |||||||||||||| || ||||||||||    
T  15808968 ttgctaaaacactcccacataaaaattagtgggtgtgttctagcaaacccctatatatata 15808908  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 203 - 262
Target Start/End: Complemental strand, 17421690 - 17421630
Alignment:
Q  203 cttgctaaaacactcccagataaaaactaatggatgtgttctagcaaat-ccatatatata 262  Q
    ||||||||| |||||||| |||||||||| ||| ||||||||||||||| |||||||||||    
T  17421690 cttgctaaatcactcccacataaaaactagtgggtgtgttctagcaaatcccatatatata 17421630  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #41
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 204 - 264
Target Start/End: Original strand, 22800822 - 22800882
Alignment:
Q  204 ttgctaaaacactcccagataaaaactaatggatgtgttctagcaaatccatatatatata 264  Q
    |||||||||||||| ||  ||||||||| ||||| ||||||| ||||||||||||||||||    
T  22800822 ttgctaaaacactctcacgtaaaaactagtggatttgttctatcaaatccatatatatata 22800882  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #42
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 204 - 264
Target Start/End: Complemental strand, 33282254 - 33282195
Alignment:
Q  204 ttgctaaaacactcccagataaaaactaatggatgtgttctagcaaatccatatatatata 264  Q
    ||||||| ||||||||| |||||||||| ||| |||||||||||||| |||||||||||||    
T  33282254 ttgctaagacactcccacataaaaactagtgggtgtgttctagcaaa-ccatatatatata 33282195  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #43
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 203 - 250
Target Start/End: Complemental strand, 4737928 - 4737881
Alignment:
Q  203 cttgctaaaacactcccagataaaaactaatggatgtgttctagcaaa 250  Q
    |||||||||||||||||| |||||||||| ||| ||||||||||||||    
T  4737928 cttgctaaaacactcccacataaaaactagtgggtgtgttctagcaaa 4737881  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #44
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 203 - 264
Target Start/End: Original strand, 17233098 - 17233160
Alignment:
Q  203 cttgctaaaacactcccagataaaaactaatggatgtgttctagcaaat-ccatatatatata 264  Q
    |||||||||||||||| | |||||||||| ||| ||||||||| ||||| |||||||||||||    
T  17233098 cttgctaaaacactcctacataaaaactagtgggtgtgttctaccaaatcccatatatatata 17233160  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #45
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 203 - 249
Target Start/End: Original strand, 31240430 - 31240476
Alignment:
Q  203 cttgctaaaacactcccagataaaaactaatggatgtgttctagcaa 249  Q
    ||||||||||||||| || |||||||||| |||||||||||||||||    
T  31240430 cttgctaaaacactctcacataaaaactagtggatgtgttctagcaa 31240476  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #46
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 203 - 253
Target Start/End: Complemental strand, 37468541 - 37468491
Alignment:
Q  203 cttgctaaaacactcccagataaaaactaatggatgtgttctagcaaatcc 253  Q
    |||||||||||||||||| |||||||||| ||| |||||| ||||||||||    
T  37468541 cttgctaaaacactcccacataaaaactagtgggtgtgttttagcaaatcc 37468491  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #47
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 204 - 250
Target Start/End: Complemental strand, 39999234 - 39999188
Alignment:
Q  204 ttgctaaaacactcccagataaaaactaatggatgtgttctagcaaa 250  Q
    ||||||||||||||||| |||||||||| ||| ||||||||||||||    
T  39999234 ttgctaaaacactcccacataaaaactagtgggtgtgttctagcaaa 39999188  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #48
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 203 - 264
Target Start/End: Original strand, 6261177 - 6261238
Alignment:
Q  203 cttgctaaaacactcccagataaaaactaatggatgtgttctagcaaatccatatatatata 264  Q
    ||||||||||||||| || ||||||| || | | |||||||||||||||| |||||||||||    
T  6261177 cttgctaaaacactctcacataaaaaatagtaggtgtgttctagcaaatctatatatatata 6261238  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #49
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 203 - 264
Target Start/End: Original strand, 13711219 - 13711280
Alignment:
Q  203 cttgctaaaacactcccagataaaaactaatggatgtgttctagcaaatccatatatatata 264  Q
    ||||||||||||||| || |||||||| | ||| |||||||||| ||||| |||||||||||    
T  13711219 cttgctaaaacactctcacataaaaaccagtgggtgtgttctagtaaatctatatatatata 13711280  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #50
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 204 - 264
Target Start/End: Complemental strand, 17605039 - 17604978
Alignment:
Q  204 ttgctaaaacactcccagataaaaactaatggatgtgttctagcaaa-tccatatatatata 264  Q
    ||||||||| ||||||| |||||||||| ||| ||||||||||||||  |||||||||||||    
T  17605039 ttgctaaaagactcccacataaaaactagtgggtgtgttctagcaaaccccatatatatata 17604978  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #51
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 178 - 226
Target Start/End: Original strand, 27005102 - 27005150
Alignment:
Q  178 atatttattaactttttaattataacttgctaaaacactcccagataaa 226  Q
    |||| ||||||||||||| |||||| ||||||||||||||||| |||||    
T  27005102 atatatattaactttttagttataatttgctaaaacactcccacataaa 27005150  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #52
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 153 - 264
Target Start/End: Original strand, 2528897 - 2529013
Alignment:
Q  153 gtgtgttatagcaagatacaccttaa----tatttattaactttttaattataactt-gctaaaacactcccagataaaaactaatggatgtgttctagc 247  Q
    ||||||| |||||| || ||||||||    ||||||  ||||||||||||||||||| |||||||||| ||   |||||||||| ||| ||| | |||||    
T  2528897 gtgtgttttagcaacattcaccttaaggtgtatttaacaactttttaattataacttcgctaaaacacaccttaataaaaactagtgggtgtatcctagc 2528996  T
Q  248 aaatccatatatatata 264  Q
    |||  ||||||||||||    
T  2528997 aaactcatatatatata 2529013  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #53
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 143 - 203
Target Start/End: Complemental strand, 3960701 - 3960637
Alignment:
Q  143 tttttagagggtgtgttatagcaagatacaccttaa----tatttattaactttttaattataac 203  Q
    |||||||| ||||||||||||||| |||||| ||||    ||||||||||||||||| |||||||    
T  3960701 tttttagaaggtgtgttatagcaacatacacattaaggtgtatttattaactttttagttataac 3960637  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #54
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 203 - 250
Target Start/End: Original strand, 12910208 - 12910255
Alignment:
Q  203 cttgctaaaacactcccagataaaaactaatggatgtgttctagcaaa 250  Q
    |||||||||||||||||| |||||||||| ||| ||||||||| ||||    
T  12910208 cttgctaaaacactcccacataaaaactagtgggtgtgttctaacaaa 12910255  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #55
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 204 - 251
Target Start/End: Original strand, 30688104 - 30688151
Alignment:
Q  204 ttgctaaaacactcccagataaaaactaatggatgtgttctagcaaat 251  Q
    ||||||||||||||||| |||||||||| | | |||||||||||||||    
T  30688104 ttgctaaaacactcccacataaaaactagttggtgtgttctagcaaat 30688151  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #56
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 204 - 250
Target Start/End: Complemental strand, 14795689 - 14795643
Alignment:
Q  204 ttgctaaaacactcccagataaaaactaatggatgtgttctagcaaa 250  Q
    ||||||||||||||||| |||||||||| ||  ||||||||||||||    
T  14795689 ttgctaaaacactcccacataaaaactagtgagtgtgttctagcaaa 14795643  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #57
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 203 - 253
Target Start/End: Complemental strand, 28747758 - 28747708
Alignment:
Q  203 cttgctaaaacactcccagataaaaactaatggatgtgttctagcaaatcc 253  Q
    ||||||||||||||| || |||||||| | ||| |||||||||||||||||    
T  28747758 cttgctaaaacactctcacataaaaacaagtgggtgtgttctagcaaatcc 28747708  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #58
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 203 - 252
Target Start/End: Original strand, 8410804 - 8410853
Alignment:
Q  203 cttgctaaaacactcccagataaaaactaatggatgtgttctagcaaatc 252  Q
    |||||||||||||||||| |||||||||| ||| ||||||| | ||||||    
T  8410804 cttgctaaaacactcccacataaaaactagtgggtgtgttccaacaaatc 8410853  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #59
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 204 - 264
Target Start/End: Original strand, 30667767 - 30667828
Alignment:
Q  204 ttgctaaaacactcccagataaaaactaatggatgtgttctagcaaatcc-atatatatata 264  Q
    ||||||||||||||| | |||||||||| ||| ||||||| |||||| || |||||||||||    
T  30667767 ttgctaaaacactcctacataaaaactagtgggtgtgttccagcaaaccctatatatatata 30667828  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #60
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 144 - 264
Target Start/End: Original strand, 4083857 - 4083982
Alignment:
Q  144 ttttagagggtgtgttatagcaagatacaccttaa----tatttattaactttttaattataactt-gctaaaacactcccagataaaaactaatggatg 238  Q
    ||||||| |||||||| |||| | || ||||||||    ||||||  ||||||||| ||||| ||| |||||||||| ||   |||||||||| ||| ||    
T  4083857 ttttagaaggtgtgttttagcgacattcaccttaaggtgtatttaacaactttttagttatatctttgctaaaacacaccttaataaaaactagtgggtg 4083956  T
Q  239 tgttctagcaaatccatatatatata 264  Q
    | | |||||||| |||||||||||||    
T  4083957 tatcctagcaaacccatatatatata 4083982  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #61
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 200 - 264
Target Start/End: Original strand, 17233455 - 17233519
Alignment:
Q  200 taacttgctaaaacactcccagataaaaactaatggatgtgttctagcaaatccatatatatata 264  Q
    ||||||||||||||||| ||| |||||||||||| | | | ||||| ||||||  ||||||||||    
T  17233455 taacttgctaaaacacttccacataaaaactaataggtatattctaacaaatcgttatatatata 17233519  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #62
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 208 - 264
Target Start/End: Complemental strand, 37282176 - 37282120
Alignment:
Q  208 taaaacactcccagataaaaactaatggatgtgttctagcaaatccatatatatata 264  Q
    ||||||||||||| |||||||||| ||| |||||| || |||| | |||||||||||    
T  37282176 taaaacactcccatataaaaactagtgggtgtgttataacaaaccaatatatatata 37282120  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #63
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 204 - 244
Target Start/End: Complemental strand, 38661219 - 38661179
Alignment:
Q  204 ttgctaaaacactcccagataaaaactaatggatgtgttct 244  Q
    ||||||||||||||||| |||||||||| ||| ||||||||    
T  38661219 ttgctaaaacactcccacataaaaactagtgggtgtgttct 38661179  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 81; Significance: 5e-38; HSPs: 73)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 81; E-Value: 5e-38
Query Start/End: Original strand, 143 - 264
Target Start/End: Complemental strand, 6748714 - 6748589
Alignment:
Q  143 tttttagagggtgtgttatagcaagatacaccttaa----tatttattaactttttaattataacttgctaaaacactcccagataaaaactaatggatg 238  Q
    |||||||| ||||||||||||||| |||||||||||    ||||||||||||||||| |||||||||||||||||||||||| |||||||||| ||| ||    
T  6748714 tttttagaaggtgtgttatagcaacatacaccttaaggtgtatttattaactttttagttataacttgctaaaacactcccacataaaaactagtgggtg 6748615  T
Q  239 tgttctagcaaatccatatatatata 264  Q
    |||||||||||||| |||||||||||    
T  6748614 tgttctagcaaatctatatatatata 6748589  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 81; E-Value: 5e-38
Query Start/End: Original strand, 143 - 264
Target Start/End: Complemental strand, 30347838 - 30347713
Alignment:
Q  143 tttttagagggtgtgttatagcaagatacaccttaa----tatttattaactttttaattataacttgctaaaacactcccagataaaaactaatggatg 238  Q
    |||||||| ||||||||||||||| |||||||||||    ||||||||||||||||| |||||||||| ||||||||||||| |||||||||| ||| ||    
T  30347838 tttttagaaggtgtgttatagcaacatacaccttaaggtgtatttattaactttttagttataacttgttaaaacactcccacataaaaactagtgggtg 30347739  T
Q  239 tgttctagcaaatccatatatatata 264  Q
    ||||||||||||||||||||||||||    
T  30347738 tgttctagcaaatccatatatatata 30347713  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 147 - 264
Target Start/End: Original strand, 6114916 - 6115037
Alignment:
Q  147 tagagggtgtgttatagcaagatacaccttaa----tatttattaactttttaattataacttgctaaaacactcccagataaaaactaatggatgtgtt 242  Q
    |||| ||||||||||||||| |||||||||||    ||||||||||||||||| |||||||||||||||||||||||| ||||||| || ||| ||||||    
T  6114916 tagaaggtgtgttatagcaacatacaccttaaggtgtatttattaactttttagttataacttgctaaaacactcccacataaaaattagtgggtgtgtt 6115015  T
Q  243 ctagcaaatccatatatatata 264  Q
    ||||||||||||||||||||||    
T  6115016 ctagcaaatccatatatatata 6115037  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 147 - 264
Target Start/End: Complemental strand, 17226262 - 17226141
Alignment:
Q  147 tagagggtgtgttatagcaagatacaccttaa----tatttattaactttttaattataacttgctaaaacactcccagataaaaactaatggatgtgtt 242  Q
    |||| ||||||||||||||| |||||||||||    ||||||||||||||||| |||||||||||||||||||||||| ||||||| || ||| ||||||    
T  17226262 tagaaggtgtgttatagcaacatacaccttaaggtgtatttattaactttttagttataacttgctaaaacactcccacataaaaattagtgggtgtgtt 17226163  T
Q  243 ctagcaaatccatatatatata 264  Q
    ||||||||||||||||||||||    
T  17226162 ctagcaaatccatatatatata 17226141  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 143 - 264
Target Start/End: Original strand, 21727776 - 21727901
Alignment:
Q  143 tttttagagggtgtgttatagcaagatacaccttaa----tatttattaactttttaattataacttgctaaaacactcccagataaaaactaatggatg 238  Q
    |||||| | ||||||||||||||| |||||||||||    |||||||||||||||||||||||||||||||||||||||||| ||||||| || ||| ||    
T  21727776 tttttataaggtgtgttatagcaacatacaccttaaggtgtatttattaactttttaattataacttgctaaaacactcccacataaaaattagtgggtg 21727875  T
Q  239 tgttctagcaaatccatatatatata 264  Q
    ||||||||||||||| ||||||||||    
T  21727876 tgttctagcaaatccctatatatata 21727901  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 146 - 264
Target Start/End: Original strand, 12896771 - 12896894
Alignment:
Q  146 ttagagggtgtgttatagcaagatacaccttaa----tatttattaactttttaattataacttgctaaaacactcccagataaaaactaatggatgtgt 241  Q
    ||||| ||||||||||||||| |||||||||||    |||||||||||||||||||||||||||||||||||||| ||| |||||||||| ||| |||||    
T  12896771 ttagaaggtgtgttatagcaacatacaccttaaggtgtatttattaactttttaattataacttgctaaaacacttccacataaaaactagtgggtgtgt 12896870  T
Q  242 tctagcaaatc-catatatatata 264  Q
    ||||||||||| ||||||||||||    
T  12896871 tctagcaaatctcatatatatata 12896894  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 74; E-Value: 7e-34
Query Start/End: Original strand, 143 - 264
Target Start/End: Complemental strand, 6109228 - 6109102
Alignment:
Q  143 tttttagagggtgtgttatagcaagatacaccttaa----tatttattaactttttaattataacttgctaaaacactcccagataaaaactaatggatg 238  Q
    |||||||| ||||||||||||||| |||||||||||    ||||||||||||||||| |||||||||||||||||||||||| ||||||| || ||| ||    
T  6109228 tttttagaaggtgtgttatagcaacatacaccttaaagtgtatttattaactttttagttataacttgctaaaacactcccacataaaaattagtgggtg 6109129  T
Q  239 tgttctagcaaatc-catatatatata 264  Q
    |||||||||||||| ||||||||||||    
T  6109128 tgttctagcaaatctcatatatatata 6109102  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 73; E-Value: 3e-33
Query Start/End: Original strand, 143 - 264
Target Start/End: Original strand, 8815461 - 8815586
Alignment:
Q  143 tttttagagggtgtgttatagcaagatacaccttaa----tatttattaactttttaattataacttgctaaaacactcccagataaaaactaatggatg 238  Q
    |||||||| ||||||||||||||| |||||||||||    |||||||||| |||||| |||||||||||||||||||||||| |||||||||| ||| ||    
T  8815461 tttttagaaggtgtgttatagcaacatacaccttaaggtgtatttattaattttttagttataacttgctaaaacactcccacataaaaactagtgggtg 8815560  T
Q  239 tgttctagcaaatccatatatatata 264  Q
    ||||| ||||||||| ||||||||||    
T  8815561 tgttcgagcaaatccctatatatata 8815586  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 73; E-Value: 3e-33
Query Start/End: Original strand, 147 - 264
Target Start/End: Complemental strand, 26152570 - 26152449
Alignment:
Q  147 tagagggtgtgttatagcaagatacaccttaa----tatttattaactttttaattataacttgctaaaacactcccagataaaaactaatggatgtgtt 242  Q
    |||| ||||||||||||||| |||||||||||    ||||||||||||||||| |||||||||||||||||||||||| ||||||| || ||| ||||||    
T  26152570 tagaaggtgtgttatagcaacatacaccttaaggtgtatttattaactttttagttataacttgctaaaacactcccacataaaaattagtgggtgtgtt 26152471  T
Q  243 ctagcaaatccatatatatata 264  Q
    ||||||||||| ||||||||||    
T  26152470 ctagcaaatccctatatatata 26152449  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 71; E-Value: 5e-32
Query Start/End: Original strand, 153 - 264
Target Start/End: Original strand, 27728334 - 27728449
Alignment:
Q  153 gtgtgttatagcaagatacaccttaa----tatttattaactttttaattataacttgctaaaacactcccagataaaaactaatggatgtgttctagca 248  Q
    |||||||||||||| |||||||||||    ||||||||||||||||| |||||||||||||||||||||||| || ||||| | ||| ||||||||||||    
T  27728334 gtgtgttatagcaacatacaccttaagatgtatttattaactttttagttataacttgctaaaacactcccacattaaaacaagtgggtgtgttctagca 27728433  T
Q  249 aatccatatatatata 264  Q
    ||||||||||||||||    
T  27728434 aatccatatatatata 27728449  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 71; E-Value: 5e-32
Query Start/End: Original strand, 144 - 264
Target Start/End: Complemental strand, 51148075 - 51147949
Alignment:
Q  144 ttttagagggtgtgttatagcaagatacaccttaa----tatttattaactttttaattataacttgctaaaacactcc--cagataaaaactaatggat 237  Q
    |||||||  |||||||||||||| |||||||||||    ||||||||||||||||| ||||||||||||||||||||||  || |||||||||| ||| |    
T  51148075 ttttagaaagtgtgttatagcaacatacaccttaaggtgtatttattaactttttagttataacttgctaaaacactcccacacataaaaactagtgggt 51147976  T
Q  238 gtgttctagcaaatccatatatatata 264  Q
    |||||||||||||||||||||||||||    
T  51147975 gtgttctagcaaatccatatatatata 51147949  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 69; E-Value: 7e-31
Query Start/End: Original strand, 143 - 264
Target Start/End: Complemental strand, 994786 - 994661
Alignment:
Q  143 tttttagagggtgtgttatagcaagatacaccttaa----tatttattaactttttaattataacttgctaaaacactcccagataaaaactaatggatg 238  Q
    |||||||| ||||||||||||||  |||||||||||    ||||||||||||||||| |||||||||| ||||||||||||| ||||||| || ||| ||    
T  994786 tttttagaaggtgtgttatagcagcatacaccttaaggtgtatttattaactttttagttataacttgttaaaacactcccacataaaaattagtgggtg 994687  T
Q  239 tgttctagcaaatccatatatatata 264  Q
    ||||||||||||| ||||||||||||    
T  994686 tgttctagcaaattcatatatatata 994661  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 69; E-Value: 7e-31
Query Start/End: Original strand, 143 - 264
Target Start/End: Original strand, 7848657 - 7848781
Alignment:
Q  143 tttttagagggtgtgttatagcaagatacaccttaa----tatttattaactttttaattataacttgctaaaacactcccagataaaaactaatggatg 238  Q
    |||||||| |||||||||||||||  ||||||||||    ||||||||||||||||| |||||||||||||||||||||||| |||||||||| ||| ||    
T  7848657 tttttagaaggtgtgttatagcaacgtacaccttaaggtgtatttattaactttttagttataacttgctaaaacactcccacataaaaactagtgggtg 7848756  T
Q  239 tgttctagcaaatccatatatatata 264  Q
    |||||||||||||  |||||||||||    
T  7848757 tgttctagcaaat-tatatatatata 7848781  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 152 - 264
Target Start/End: Original strand, 27800586 - 27800702
Alignment:
Q  152 ggtgtgttatagcaagatacaccttaa----tatttattaactttttaattataacttgctaaaacactcccagataaaaactaatggatgtgttctagc 247  Q
    ||||||||||||||| |||||| ||||    ||||||||||||||||| |||||||||||||||||||||||| |||||||||| | | |||||||||||    
T  27800586 ggtgtgttatagcaacatacactttaagatgtatttattaactttttagttataacttgctaaaacactcccacataaaaactattaggtgtgttctagc 27800685  T
Q  248 aaatccatatatatata 264  Q
    ||||| |||||||||||    
T  27800686 aaatctatatatatata 27800702  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 143 - 250
Target Start/End: Original strand, 11460280 - 11460391
Alignment:
Q  143 tttttagagggtgtgttatagcaagatacaccttaa----tatttattaactttttaattataacttgctaaaacactcccagataaaaactaatggatg 238  Q
    |||||||| ||||||||||||||| |||||||||||    ||||||||||||||||| |||||||||||||||||| ||||| |||||||||| ||| ||    
T  11460280 tttttagaaggtgtgttatagcaacatacaccttaaggtgtatttattaactttttagttataacttgctaaaacattcccacataaaaactagtgggtg 11460379  T
Q  239 tgttctagcaaa 250  Q
    ||||||||||||    
T  11460380 tgttctagcaaa 11460391  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 143 - 253
Target Start/End: Original strand, 17065856 - 17065970
Alignment:
Q  143 tttttagagggtgtgttatagcaagatacaccttaa----tatttattaactttttaattataacttgctaaaacactcccagataaaaactaatggatg 238  Q
    |||||||| |||||||||||  || |||||||||||    ||||||||||||| ||| |||||||||||||||||||||||| |||||||||| ||||||    
T  17065856 tttttagaaggtgtgttataataacatacaccttaagacgtatttattaacttcttagttataacttgctaaaacactcccacataaaaactagtggatg 17065955  T
Q  239 tgttctagcaaatcc 253  Q
    |||||||||||||||    
T  17065956 tgttctagcaaatcc 17065970  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 146 - 264
Target Start/End: Complemental strand, 26152258 - 26152136
Alignment:
Q  146 ttagagggtgtgttatagcaagatacaccttaa----tatttattaactttttaattataacttgctaaaacactcccagataaaaactaatggatgtgt 241  Q
    ||||| ||||||||||||||| |||||||||||    ||||||||||||||||| |||||||| |||||||||||| || |||||||||| ||| |||||    
T  26152258 ttagaaggtgtgttatagcaacatacaccttaaggtatatttattaactttttagttataactagctaaaacactctcacataaaaactagtgggtgtgt 26152159  T
Q  242 tctagcaaatccatatatatata 264  Q
    | ||| |||||||||||||||||    
T  26152158 tttagtaaatccatatatatata 26152136  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 147 - 253
Target Start/End: Original strand, 47461829 - 47461939
Alignment:
Q  147 tagagggtgtgttatagcaagatacaccttaa----tatttattaactttttaattataacttgctaaaacactcccagataaaaactaatggatgtgtt 242  Q
    |||| ||||||||||||||| |||||||||||    ||||||||||||||||| |||||||||||||||||| ||||| |||||||||| ||| ||||||    
T  47461829 tagaaggtgtgttatagcaacatacaccttaaggtgtatttattaactttttagttataacttgctaaaacattcccacataaaaactagtgggtgtgtt 47461928  T
Q  243 ctagcaaatcc 253  Q
    |||||||||||    
T  47461929 ctagcaaatcc 47461939  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 143 - 264
Target Start/End: Original strand, 4043766 - 4043891
Alignment:
Q  143 tttttagagggtgtgttatagcaagatacaccttaa----tatttattaactttttaattataacttgctaaaacactcccagataaaaactaatggatg 238  Q
    |||||||| ||||||||||||||| |||||||||||    ||||||||||||||||| ||||||||||||||||||||| || ||||| | || ||| ||    
T  4043766 tttttagaaggtgtgttatagcaacatacaccttaaggtgtatttattaactttttagttataacttgctaaaacactctcacataaatattagtgggtg 4043865  T
Q  239 tgttctagcaaatccatatatatata 264  Q
    ||||||||||||| | ||||||||||    
T  4043866 tgttctagcaaattcctatatatata 4043891  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 147 - 264
Target Start/End: Original strand, 7521493 - 7521614
Alignment:
Q  147 tagagggtgtgttatagcaagatacaccttaa----tatttattaactttttaattataacttgctaaaacactcccagataaaaactaatggatgtgtt 242  Q
    |||| ||||||||||||||| |||||||||||    ||||||||||||||||| |||||||||| ||||| ||||||| ||||||| || ||| ||||||    
T  7521493 tagaaggtgtgttatagcaacatacaccttaaggtgtatttattaactttttagttataacttgttaaaatactcccacataaaaattagtgggtgtgtt 7521592  T
Q  243 ctagcaaatccatatatatata 264  Q
    ||||||||||| ||||||||||    
T  7521593 ctagcaaatccctatatatata 7521614  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 143 - 253
Target Start/End: Complemental strand, 3269297 - 3269183
Alignment:
Q  143 tttttagagggtgtgttatagcaagatacaccttaa----tatttattaactttttaattataacttgctaaaacactcccagataaaaactaatggatg 238  Q
    |||||||| ||||||||||||||| ||||| |||||    ||||||||||||||||| |||||||||||||||||||||||| ||||||| || | | ||    
T  3269297 tttttagaaggtgtgttatagcaacatacatcttaaggtgtatttattaactttttagttataacttgctaaaacactcccacataaaaattagtaggtg 3269198  T
Q  239 tgttctagcaaatcc 253  Q
    |||||||||||||||    
T  3269197 tgttctagcaaatcc 3269183  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 143 - 252
Target Start/End: Original strand, 52654445 - 52654558
Alignment:
Q  143 tttttagagggtgtgttatagcaagatacaccttaa----tatttattaactttttaattataacttgctaaaacactcccagataaaaactaatggatg 238  Q
    |||||||| ||||||||||||||| ||| |||||||    ||||||||||||||||| |||||||||||||||||||||||| ||||||| || ||| ||    
T  52654445 tttttagaaggtgtgttatagcaacatataccttaaagtgtatttattaactttttagttataacttgctaaaacactcccacataaaaattagtgggtg 52654544  T
Q  239 tgttctagcaaatc 252  Q
    || |||||||||||    
T  52654545 tgatctagcaaatc 52654558  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 59; E-Value: 7e-25
Query Start/End: Original strand, 179 - 264
Target Start/End: Complemental strand, 42856996 - 42856913
Alignment:
Q  179 tatttattaactttttaattataacttgctaaaacactcccagataaaaactaatggatgtgttctagcaaatccatatatatata 264  Q
    ||||||||||||||||| |||||||||||||||||||||||| |||||||||||||  ||||||||| ||||||| ||||||||||    
T  42856996 tatttattaactttttagttataacttgctaaaacactcccacataaaaactaatg--tgtgttctaacaaatccctatatatata 42856913  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 143 - 264
Target Start/End: Original strand, 38798110 - 38798235
Alignment:
Q  143 tttttagagggtgtgttatagcaagatacaccttaa----tatttattaactttttaattataacttgctaaaacactcccagataaaaactaatggatg 238  Q
    |||||||| |||||||||| |||| |||||| ||||    |||||||||| |||||| |||||||||||||||||||||||  |||||||||| ||| ||    
T  38798110 tttttagaaggtgtgttatcgcaacatacactttaaggtgtatttattaattttttagttataacttgctaaaacactcccgcataaaaactagtgggtg 38798209  T
Q  239 tgttctagcaaatccatatatatata 264  Q
    |||||||||| ||  |||||||||||    
T  38798210 tgttctagcatatatatatatatata 38798235  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 153 - 264
Target Start/End: Original strand, 48649433 - 48649549
Alignment:
Q  153 gtgtgttatagcaagatacaccttaa-----tatttattaactttttaattataacttgctaaaacactcccagataaaaactaatggatgtgttctagc 247  Q
    |||||||||||||| |||||||| ||     ||||||||||||||||| |||||||||| ||||||||||||| ||||||||||  || |||||||||||    
T  48649433 gtgtgttatagcaacatacacctcaaagatgtatttattaactttttagttataacttgttaaaacactcccacataaaaactagagggtgtgttctagc 48649532  T
Q  248 aaatccatatatatata 264  Q
    ||||  |||||||||||    
T  48649533 aaatatatatatatata 48649549  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 143 - 243
Target Start/End: Complemental strand, 995092 - 994988
Alignment:
Q  143 tttttagagggtgtgttatagcaagatacaccttaa----tatttattaactttttaattataacttgctaaaacactcccagataaaaactaatggatg 238  Q
    |||||||| ||||||||| ||||| |||||||||||    ||||||||||||||||| |||||||||| ||||||||||||| |||||||||| ||| ||    
T  995092 tttttagaaggtgtgttacagcaacatacaccttaaggtgtatttattaactttttagttataacttgttaaaacactcccacataaaaactagtggctg 994993  T
Q  239 tgttc 243  Q
    |||||    
T  994992 tgttc 994988  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 153 - 264
Target Start/End: Complemental strand, 45059586 - 45059470
Alignment:
Q  153 gtgtgttatagcaagatacaccttaa----tatttattaactttttaattataacttgctaaaacactcccagataaaaactaatggatgtgttctagca 248  Q
    |||||||||| ||| ||||| |||||    ||||||||||||||||| ||||||| || ||||||||||||| |||||||||| ||| ||||||||||||    
T  45059586 gtgtgttataacaacatacatcttaaggtgtatttattaactttttagttataacctgttaaaacactcccacataaaaactagtgggtgtgttctagca 45059487  T
Q  249 aatc-catatatatata 264  Q
    |||| ||||||||||||    
T  45059486 aatctcatatatatata 45059470  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 178 - 264
Target Start/End: Complemental strand, 52945522 - 52945436
Alignment:
Q  178 atatttattaactttttaattataacttgctaaaacactcccagataaaaactaatggatgtgttctagcaaatccatatatatata 264  Q
    |||||||||||||||||| |||||||||||||||||| ||||| ||||||| || | | |||||||||| |||||| ||||||||||    
T  52945522 atatttattaactttttagttataacttgctaaaacattcccacataaaaattagtaggtgtgttctagtaaatccttatatatata 52945436  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 203 - 264
Target Start/End: Complemental strand, 17604933 - 17604871
Alignment:
Q  203 cttgctaaaacactcccagataaaaactaatggatgtgttctagcaaatc-catatatatata 264  Q
    |||||||||||||||||| |||||||||| |||||||||||||||||||| ||||||||||||    
T  17604933 cttgctaaaacactcccacataaaaactagtggatgtgttctagcaaatctcatatatatata 17604871  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 198 - 264
Target Start/End: Complemental strand, 27360003 - 27359937
Alignment:
Q  198 tataacttgctaaaacactcccagataaaaactaatggatgtgttctagcaaatccatatatatata 264  Q
    |||| |||||||||||||||||| |||||||||| ||| ||||||||||||||||| ||||||||||    
T  27360003 tatagcttgctaaaacactcccacataaaaactagtgggtgtgttctagcaaatccctatatatata 27359937  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 143 - 261
Target Start/End: Original strand, 51952333 - 51952455
Alignment:
Q  143 tttttagagggtgtgttatagcaagatacaccttaa----tatttattaactttttaattataacttgctaaaacactcccagataaaaactaatggatg 238  Q
    |||||||| ||||||||||||||| ||||| |||||    ||||||||||||||||| |||||||||| |||||||||  || || ||||||| | | ||    
T  51952333 tttttagaaggtgtgttatagcaacatacatcttaaggtgtatttattaactttttagttataacttgttaaaacactttcacat-aaaactagtaggtg 51952431  T
Q  239 tgttctagcaaatc-catatatat 261  Q
    |||||||||||||| |||||||||    
T  51952432 tgttctagcaaatctcatatatat 51952455  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 203 - 264
Target Start/End: Original strand, 26103806 - 26103867
Alignment:
Q  203 cttgctaaaacactcccagataaaaactaatggatgtgttctagcaaatccatatatatata 264  Q
    |||||||||||||||||| ||||||| || ||||| ||||||||||||||||||||||||||    
T  26103806 cttgctaaaacactcccaaataaaaattagtggatatgttctagcaaatccatatatatata 26103867  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 200 - 264
Target Start/End: Original strand, 7565437 - 7565501
Alignment:
Q  200 taacttgctaaaacactcccagataaaaactaatggatgtgttctagcaaatccatatatatata 264  Q
    ||||||||||||||||||||| ||||||| || |||||||||| ||||||| |||||||||||||    
T  7565437 taacttgctaaaacactcccacataaaaattagtggatgtgttatagcaaacccatatatatata 7565501  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 204 - 264
Target Start/End: Original strand, 45293148 - 45293208
Alignment:
Q  204 ttgctaaaacactcccagataaaaactaatggatgtgttctagcaaatccatatatatata 264  Q
    ||||||||||||||||| |||||||||| ||| ||||||||||||||||| ||||||||||    
T  45293148 ttgctaaaacactcccacataaaaactagtgggtgtgttctagcaaatccctatatatata 45293208  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 207 - 264
Target Start/End: Complemental strand, 3544289 - 3544232
Alignment:
Q  207 ctaaaacactcccagataaaaactaatggatgtgttctagcaaatccatatatatata 264  Q
    |||||||||||||| |||||||||| ||  ||||||||||||||||||||||||||||    
T  3544289 ctaaaacactcccacataaaaactagtgagtgtgttctagcaaatccatatatatata 3544232  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 204 - 264
Target Start/End: Original strand, 17226365 - 17226426
Alignment:
Q  204 ttgctaaaacactcccagataaaaactaatggatgtgttctagcaaatcc-atatatatata 264  Q
    ||||||||||||||||| |||||||||||||| |||||||||||||| || |||||||||||    
T  17226365 ttgctaaaacactcccacataaaaactaatgggtgtgttctagcaaaccctatatatatata 17226426  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 204 - 264
Target Start/End: Original strand, 6109355 - 6109415
Alignment:
Q  204 ttgctaaaacactcccagataaaaactaatggatgtgttctagcaaatccatatatatata 264  Q
    ||||||||||||||||| |||||||||| ||| |||||||||||||| || ||||||||||    
T  6109355 ttgctaaaacactcccacataaaaactagtgggtgtgttctagcaaacccctatatatata 6109415  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 196 - 264
Target Start/End: Complemental strand, 34277511 - 34277444
Alignment:
Q  196 attataacttgctaaaacactcccagataaaaactaatggatgtgttctagcaaatccatatatatata 264  Q
    |||| |||||||||||||||||| | |||||||||| ||| |||||||||| |||||||||||||||||    
T  34277511 attacaacttgctaaaacactcc-acataaaaactagtgggtgtgttctagaaaatccatatatatata 34277444  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 203 - 262
Target Start/End: Complemental strand, 53581560 - 53581500
Alignment:
Q  203 cttgctaaaacactcccagataaaaactaatggatgtgttctagcaaatc-catatatata 262  Q
    |||||||||||||||||| |||||||||| ||| |||||||||||||||| ||||||||||    
T  53581560 cttgctaaaacactcccacataaaaactagtgggtgtgttctagcaaatctcatatatata 53581500  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 206 - 264
Target Start/End: Original strand, 1376192 - 1376251
Alignment:
Q  206 gctaaaacactcccagataaaaactaatggatgtgttctagcaaatcc-atatatatata 264  Q
    ||||||||||||||| |||||||||| ||| ||||||||||||||||| |||||||||||    
T  1376192 gctaaaacactcccacataaaaactagtgggtgtgttctagcaaatcctatatatatata 1376251  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 201 - 264
Target Start/End: Complemental strand, 12127557 - 12127494
Alignment:
Q  201 aacttgctaaaacactcccagataaaaactaatggatgtgttctagcaaatccatatatatata 264  Q
    |||||||||||||||||||| |||||||||| ||| |||||| ||||||||  |||||||||||    
T  12127557 aacttgctaaaacactcccacataaaaactagtgggtgtgttttagcaaataaatatatatata 12127494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 204 - 263
Target Start/End: Original strand, 45059723 - 45059782
Alignment:
Q  204 ttgctaaaacactcccagataaaaactaatggatgtgttctagcaaatccatatatatat 263  Q
    ||||||||||||||||| |||||||||| ||| |||||||||||||| || |||||||||    
T  45059723 ttgctaaaacactcccaaataaaaactagtgggtgtgttctagcaaacccctatatatat 45059782  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 203 - 253
Target Start/End: Complemental strand, 3800197 - 3800147
Alignment:
Q  203 cttgctaaaacactcccagataaaaactaatggatgtgttctagcaaatcc 253  Q
    |||||||||||||||||| |||||||||| ||| |||||||||||||||||    
T  3800197 cttgctaaaacactcccacataaaaactagtgggtgtgttctagcaaatcc 3800147  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 203 - 264
Target Start/End: Complemental strand, 13349136 - 13349074
Alignment:
Q  203 cttgctaaaacactcccagataaaaactaatggatgtgttctagcaaat-ccatatatatata 264  Q
    |||||||||||||||||| |||||||| | ||| ||||||||||||||| |||||||||||||    
T  13349136 cttgctaaaacactcccacataaaaaccagtgggtgtgttctagcaaatcccatatatatata 13349074  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 204 - 264
Target Start/End: Complemental strand, 4043632 - 4043571
Alignment:
Q  204 ttgctaaaacactcccagataaaaactaatggatgtgttctagcaaa-tccatatatatata 264  Q
    ||||||||||||||||| |||||||||| ||| ||||||||||||||  |||||||||||||    
T  4043632 ttgctaaaacactcccacataaaaactagtgggtgtgttctagcaaaccccatatatatata 4043571  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 204 - 264
Target Start/End: Complemental strand, 8815336 - 8815275
Alignment:
Q  204 ttgctaaaacactcccagataaaaactaatggatgtgttctagcaaa-tccatatatatata 264  Q
    ||||||||||||||||| |||||||||| ||| ||||||||||||||  |||||||||||||    
T  8815336 ttgctaaaacactcccacataaaaactagtgggtgtgttctagcaaaccccatatatatata 8815275  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 204 - 264
Target Start/End: Original strand, 21408673 - 21408734
Alignment:
Q  204 ttgctaaaacactcccagataaaaactaatggatgtgttctagcaaa-tccatatatatata 264  Q
    ||||||||||||||||| |||||||||| ||| ||||||||||||||  |||||||||||||    
T  21408673 ttgctaaaacactcccacataaaaactagtgggtgtgttctagcaaaccccatatatatata 21408734  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 204 - 264
Target Start/End: Complemental strand, 21727649 - 21727588
Alignment:
Q  204 ttgctaaaacactcccagataaaaactaatggatgtgttctagcaaa-tccatatatatata 264  Q
    ||||||||||||||||| |||||||||| ||| ||||||||||||||  |||||||||||||    
T  21727649 ttgctaaaacactcccacataaaaactagtgggtgtgttctagcaaaccccatatatatata 21727588  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 204 - 264
Target Start/End: Original strand, 26158423 - 26158484
Alignment:
Q  204 ttgctaaaacactcccagataaaaactaatggatgtgttctagcaaa-tccatatatatata 264  Q
    ||||||||||||||||| |||||||||| ||| ||||||||||||||  |||||||||||||    
T  26158423 ttgctaaaacactcccacataaaaactagtgggtgtgttctagcaaaccccatatatatata 26158484  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 203 - 264
Target Start/End: Original strand, 31039748 - 31039809
Alignment:
Q  203 cttgctaaaacactcccagataaaaactaatggatgtgttctagcaaatccatatatatata 264  Q
    |||||||||||||||| | |||||||||| ||| |||||||||||||| || ||||||||||    
T  31039748 cttgctaaaacactcctacataaaaactagtgggtgtgttctagcaaacccctatatatata 31039809  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 207 - 264
Target Start/End: Complemental strand, 51952211 - 51952154
Alignment:
Q  207 ctaaaacactcccagataaaaactaatggatgtgttctagcaaatccatatatatata 264  Q
    |||||||||||||| |||||||||| |||||||||||||||||| ||  |||||||||    
T  51952211 ctaaaacactcccacataaaaactagtggatgtgttctagcaaaccccaatatatata 51952154  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #52
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 204 - 264
Target Start/End: Complemental strand, 12896641 - 12896581
Alignment:
Q  204 ttgctaaaacactcccagataaaaactaatggatgtgttctagcaaatccatatatatata 264  Q
    ||||||||||||||||| |||||||||| ||| | |||||||||||| || ||||||||||    
T  12896641 ttgctaaaacactcccacataaaaactagtgggtttgttctagcaaacccgtatatatata 12896581  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #53
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 204 - 264
Target Start/End: Complemental strand, 47461698 - 47461638
Alignment:
Q  204 ttgctaaaacactcccagataaaaactaatggatgtgttctagcaaatccatatatatata 264  Q
    ||||||||||||||||| |||||||||| ||| |||||||||||||| || | ||||||||    
T  47461698 ttgctaaaacactcccacataaaaactagtgggtgtgttctagcaaacccctctatatata 47461638  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #54
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 204 - 270
Target Start/End: Complemental strand, 7848531 - 7848464
Alignment:
Q  204 ttgctaaaacactcccagataaaaactaatggatgtgttctagcaaa-tccatatatatataataaat 270  Q
    ||||||||||||||| | |||||||||| ||| ||||||||||||||  ||||||||||||| |||||    
T  7848531 ttgctaaaacactcctacataaaaactagtgggtgtgttctagcaaaccccatatatatatattaaat 7848464  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #55
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 203 - 253
Target Start/End: Complemental strand, 36823956 - 36823906
Alignment:
Q  203 cttgctaaaacactcccagataaaaactaatggatgtgttctagcaaatcc 253  Q
    |||||||||||||||||| |||||||||| | | |||||||||||||||||    
T  36823956 cttgctaaaacactcccacataaaaactagttggtgtgttctagcaaatcc 36823906  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #56
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 198 - 264
Target Start/End: Original strand, 53467537 - 53467603
Alignment:
Q  198 tataacttgctaaaacactcccagataaaaactaatggatgtgttctagcaaatccatatatatata 264  Q
    ||||||||| ||||||||||||| |||||||||| | | | |||||||||||| || ||||||||||    
T  53467537 tataacttgttaaaacactcccacataaaaactagtaggtatgttctagcaaacccctatatatata 53467603  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #57
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 155 - 264
Target Start/End: Original strand, 3544430 - 3544544
Alignment:
Q  155 gtgttatagcaagatacaccttaa----tatttattaactttttaattataacttgctaaaacactcccagataaaaactaatggatgtgttctagcaaa 250  Q
    |||||||| ||| |||||||||||    ||||||||| ||||||| |||||| ||||||||||||||  | |||||||| | |   ||||||||||||||    
T  3544430 gtgttatatcaacatacaccttaagatgtatttattatctttttagttataatttgctaaaacactcttacataaaaacgagtaagtgtgttctagcaaa 3544529  T
Q  251 -tccatatatatata 264  Q
      |||||||||||||    
T  3544530 ccccatatatatata 3544544  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #58
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 204 - 264
Target Start/End: Original strand, 6748840 - 6748901
Alignment:
Q  204 ttgctaaaacactcccagataaaaactaatggatgtgttctagcaaa-tccatatatatata 264  Q
    ||||||||||||| ||| |||||||||| ||| ||||||||||||||  |||||||||||||    
T  6748840 ttgctaaaacacttccacataaaaactagtgggtgtgttctagcaaaccccatatatatata 6748901  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #59
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 203 - 264
Target Start/End: Complemental strand, 27317640 - 27317579
Alignment:
Q  203 cttgctaaaacactcccagataaaaactaatggatgtgttctagcaaatccatatatatata 264  Q
    ||||||||||||||||||   ||||||||  |  ||||||||||||||||||||||||||||    
T  27317640 cttgctaaaacactcccacgaaaaaactagcgagtgtgttctagcaaatccatatatatata 27317579  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #60
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 223 - 264
Target Start/End: Original strand, 29239802 - 29239843
Alignment:
Q  223 taaaaactaatggatgtgttctagcaaatccatatatatata 264  Q
    ||||||||| || |||||||||||||||||||||||||||||    
T  29239802 taaaaactagtgaatgtgttctagcaaatccatatatatata 29239843  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #61
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 204 - 264
Target Start/End: Complemental strand, 37504545 - 37504484
Alignment:
Q  204 ttgctaaaacactcccagataaaaactaatggatgtgttctagcaaatcc-atatatatata 264  Q
    ||||||||||||| ||| |||||||||| ||| |||||||||||||| || |||||||||||    
T  37504545 ttgctaaaacacttccacataaaaactagtgggtgtgttctagcaaacccaatatatatata 37504484  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #62
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 204 - 263
Target Start/End: Complemental strand, 6114785 - 6114725
Alignment:
Q  204 ttgctaaaacactcccagataaaaactaatggatgtgttctagcaaa-tccatatatatat 263  Q
    ||||||||||||||||| ||||||| || ||| ||||||||||||||  ||||||||||||    
T  6114785 ttgctaaaacactcccacataaaaattagtgggtgtgttctagcaaaccccatatatatat 6114725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #63
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 204 - 264
Target Start/End: Complemental strand, 27800468 - 27800408
Alignment:
Q  204 ttgctaaaacactcccagataaaaactaatggatgtgttctagcaaatccatatatatata 264  Q
    ||||||||||||| ||| ||||||||||| || || || |||||||| |||||||||||||    
T  27800468 ttgctaaaacacttccacataaaaactaacgggtgcgtactagcaaacccatatatatata 27800408  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #64
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 143 - 195
Target Start/End: Original strand, 37504671 - 37504727
Alignment:
Q  143 tttttagagggtgtgttatagcaagatacaccttaa----tatttattaacttttta 195  Q
    |||||||| ||||||||||||||| |||||||||||    |||||||||||||||||    
T  37504671 tttttagaaggtgtgttatagcaacatacaccttaaggtgtatttattaacttttta 37504727  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #65
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 187 - 264
Target Start/End: Complemental strand, 48765231 - 48765152
Alignment:
Q  187 aactttttaattataacttg-ctaaaacactcccagataaaaactaatggatgtgttctagcaaatcc-atatatatata 264  Q
    ||||||||| ||||| |||  |||||||||||||| |||||||||| ||||||| | ||| ||||||| |||||||||||    
T  48765231 aactttttagttatatctttactaaaacactcccacataaaaactagtggatgtatcctaacaaatcctatatatatata 48765152  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #66
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 203 - 264
Target Start/End: Complemental strand, 8814779 - 8814717
Alignment:
Q  203 cttgctaaaacactcccagataaaaactaatggatgtgttctagc-aaatccatatatatata 264  Q
    |||||||||||||||||| |||||  ||| ||| ||||||||||| ||||||| |||||||||    
T  8814779 cttgctaaaacactcccacataaatcctagtgggtgtgttctagcaaaatccacatatatata 8814717  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #67
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 204 - 246
Target Start/End: Complemental strand, 11460154 - 11460112
Alignment:
Q  204 ttgctaaaacactcccagataaaaactaatggatgtgttctag 246  Q
    ||||||||||||||||| |||||||||| ||| ||||||||||    
T  11460154 ttgctaaaacactcccacataaaaactagtgggtgtgttctag 11460112  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #68
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 203 - 264
Target Start/End: Original strand, 22894940 - 22895002
Alignment:
Q  203 cttgctaaaacactcccagataaaaactaatggatgtgttctagcaaatc-catatatatata 264  Q
    |||||||||||||||||| ||||||| || ||| ||| ||||||||||||  |||||||||||    
T  22894940 cttgctaaaacactcccacataaaaattagtgggtgtattctagcaaatcttatatatatata 22895002  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #69
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 207 - 264
Target Start/End: Original strand, 26152392 - 26152450
Alignment:
Q  207 ctaaaacactcccagataaaaactaatggatgtgttctagcaaatc-catatatatata 264  Q
    |||||||||||||| |||||||||| ||| | |||||||||||| | ||||||||||||    
T  26152392 ctaaaacactcccacataaaaactagtgggtatgttctagcaaacctcatatatatata 26152450  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #70
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 204 - 250
Target Start/End: Complemental strand, 27728195 - 27728149
Alignment:
Q  204 ttgctaaaacactcccagataaaaactaatggatgtgttctagcaaa 250  Q
    ||||||||||||||||| |||| ||||| ||| ||||||||||||||    
T  27728195 ttgctaaaacactcccacataataactagtgggtgtgttctagcaaa 27728149  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #71
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 203 - 264
Target Start/End: Original strand, 50913191 - 50913253
Alignment:
Q  203 cttgctaaaacactcccagataaaaactaatggatgtgttctagcaaa-tccatatatatata 264  Q
    |||||||||||||||||| |||||||||| | | |||| |||||||||  |||||||||||||    
T  50913191 cttgctaaaacactcccacataaaaactagtaggtgtgctctagcaaaccccatatatatata 50913253  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #72
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 203 - 252
Target Start/End: Original strand, 33838005 - 33838054
Alignment:
Q  203 cttgctaaaacactcccagataaaaactaatggatgtgttctagcaaatc 252  Q
    |||||||||||||||| | |||||||||| ||  ||||||||||||||||    
T  33838005 cttgctaaaacactcctacataaaaactagtgcgtgtgttctagcaaatc 33838054  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #73
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 203 - 264
Target Start/End: Original strand, 48765404 - 48765465
Alignment:
Q  203 cttgctaaaacactcccagataaaaactaatggatgtgttctagcaaatccatatatatata 264  Q
    |||||||||| |||| || |||||||||| ||| ||||||||||||||| | ||| ||||||    
T  48765404 cttgctaaaatactcacacataaaaactagtgggtgtgttctagcaaattcttatgtatata 48765465  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 81; Significance: 5e-38; HSPs: 61)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 81; E-Value: 5e-38
Query Start/End: Original strand, 143 - 264
Target Start/End: Original strand, 27389614 - 27389739
Alignment:
Q  143 tttttagagggtgtgttatagcaagatacaccttaa----tatttattaactttttaattataacttgctaaaacactcccagataaaaactaatggatg 238  Q
    |||||||| ||||||||||||||| |||||||||||    ||||||||||||||||| | |||||||||||||||||||||| |||||||||| ||| ||    
T  27389614 tttttagaaggtgtgttatagcaacatacaccttaaggtgtatttattaactttttagtcataacttgctaaaacactcccacataaaaactagtgggtg 27389713  T
Q  239 tgttctagcaaatccatatatatata 264  Q
    ||||||||||||||||||||||||||    
T  27389714 tgttctagcaaatccatatatatata 27389739  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 79; E-Value: 8e-37
Query Start/End: Original strand, 146 - 264
Target Start/End: Original strand, 13385862 - 13385985
Alignment:
Q  146 ttagagggtgtgttatagcaagatacaccttaa----tatttattaactttttaattataacttgctaaaacactcccagataaaaactaatggatgtgt 241  Q
    ||||| ||||||||||||||| |||||||||||    |||||||||||||||||||||||||||||||||||||||||| |||||||||| ||| |||||    
T  13385862 ttagaaggtgtgttatagcaacatacaccttaaggtgtatttattaactttttaattataacttgctaaaacactcccacataaaaactagtgggtgtgt 13385961  T
Q  242 tctagcaaat-ccatatatatata 264  Q
    |||||||||| |||||||||||||    
T  13385962 tctagcaaatcccatatatatata 13385985  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 73; E-Value: 3e-33
Query Start/End: Original strand, 147 - 264
Target Start/End: Complemental strand, 20411253 - 20411132
Alignment:
Q  147 tagagggtgtgttatagcaagatacaccttaa----tatttattaactttttaattataacttgctaaaacactcccagataaaaactaatggatgtgtt 242  Q
    |||| ||||||||||||||| |||||||||||    ||||||||||||||||| |||||||||||||||||||||||| ||||||| || ||| ||||||    
T  20411253 tagaaggtgtgttatagcaacatacaccttaaggtgtatttattaactttttagttataacttgctaaaacactcccacataaaaattagtgggtgtgtt 20411154  T
Q  243 ctagcaaatccatatatatata 264  Q
    ||||||||||| ||||||||||    
T  20411153 ctagcaaatccctatatatata 20411132  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 71; E-Value: 5e-32
Query Start/End: Original strand, 144 - 263
Target Start/End: Complemental strand, 28646821 - 28646698
Alignment:
Q  144 ttttagagggtgtgttatagcaagatacaccttaa----tatttattaactttttaattataacttgctaaaacactcccagataaaaactaatggatgt 239  Q
    ||||||| |||| |||||||||| |||||||||||    ||||||||||||||||| |||||||||||||||| ||||| | |||||||||||||| |||    
T  28646821 ttttagaaggtgcgttatagcaacatacaccttaaggtgtatttattaactttttagttataacttgctaaaatactcctacataaaaactaatgggtgt 28646722  T
Q  240 gttctagcaaatccatatatatat 263  Q
    |||||| |||||||||||||||||    
T  28646721 gttctaacaaatccatatatatat 28646698  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 71; E-Value: 5e-32
Query Start/End: Original strand, 154 - 264
Target Start/End: Original strand, 32374675 - 32374790
Alignment:
Q  154 tgtgttatagcaagatacaccttaa----tatttattaactttttaattataacttgctaaaacactcccagataaaaactaatggatgtgttctagcaa 249  Q
    ||||||||||||| |||||||||||    |||||||||| |||||| |||||||||||||||||||||||| |||||||| |||||||||||||||||||    
T  32374675 tgtgttatagcaacatacaccttaaggtgtatttattaattttttagttataacttgctaaaacactcccacataaaaacaaatggatgtgttctagcaa 32374774  T
Q  250 atc-catatatatata 264  Q
    ||| ||||||||||||    
T  32374775 atctcatatatatata 32374790  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 143 - 257
Target Start/End: Complemental strand, 39424329 - 39424212
Alignment:
Q  143 tttttagagggtgtgttatagcaagatacaccttaa----tatttattaactttttaattataacttgctaaaacactcccagataaaaactaatggatg 238  Q
    |||||||| ||||||||||||||| |||||||||||    ||||||||||||||||||||||| |||||||||||||| ||| |||||||||| ||| ||    
T  39424329 tttttagaaggtgtgttatagcaacatacaccttaaagtgtatttattaactttttaattatatcttgctaaaacact-ccacataaaaactagtgggtg 39424231  T
Q  239 tgttctagcaaatccatat 257  Q
    |||||||||||||||||||    
T  39424230 tgttctagcaaatccatat 39424212  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 146 - 264
Target Start/End: Complemental strand, 43236211 - 43236089
Alignment:
Q  146 ttagagggtgtgttatagcaagatacaccttaa----tatttattaactttttaattataacttgctaaaacactcccagataaaaactaatggatgtgt 241  Q
    ||||| ||||||||||||||| |||||||||||    ||||||||||||||||| |||||||||||||||||||||| | |||||||||||||  |||||    
T  43236211 ttagaaggtgtgttatagcaacatacaccttaaggtgtatttattaactttttagttataacttgctaaaacactccgacataaaaactaatgagtgtgt 43236112  T
Q  242 tctagcaaatccatatatatata 264  Q
    |||||||||||| ||||| ||||    
T  43236111 tctagcaaatccctatatgtata 43236089  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 143 - 264
Target Start/End: Original strand, 47131039 - 47131165
Alignment:
Q  143 tttttagagggtgtgttatagcaagatacaccttaa----tatttattaactttttaattataacttgctaaaacactcccagataaaaactaatggatg 238  Q
    |||||||| ||||||||||||||| |||||||||||    ||||||||||||||||| ||||||||||||||||||||| || |||||||||| ||| ||    
T  47131039 tttttagaaggtgtgttatagcaacatacaccttaaggtgtatttattaactttttagttataacttgctaaaacactcacacataaaaactagtgggtg 47131138  T
Q  239 tgttctagcaaatcc-atatatatata 264  Q
    ||||||| ||||||| |||||||||||    
T  47131139 tgttctaacaaatcctatatatatata 47131165  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 69; E-Value: 7e-31
Query Start/End: Original strand, 147 - 264
Target Start/End: Complemental strand, 36817706 - 36817585
Alignment:
Q  147 tagagggtgtgttatagcaagatacaccttaa----tatttattaactttttaattataacttgctaaaacactcccagataaaaactaatggatgtgtt 242  Q
    |||| ||||||||||||||| |||||||||||    |||||||||| |||||| ||||||||||||||||||||| || ||||||| || ||| ||||||    
T  36817706 tagaaggtgtgttatagcaacatacaccttaaggtgtatttattaattttttagttataacttgctaaaacactctcacataaaaattagtgggtgtgtt 36817607  T
Q  243 ctagcaaatccatatatatata 264  Q
    ||||||||||||||||||||||    
T  36817606 ctagcaaatccatatatatata 36817585  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 152 - 264
Target Start/End: Complemental strand, 27255703 - 27255586
Alignment:
Q  152 ggtgtgttatagcaagatacaccttaa----tatttattaactttttaattataacttgctaaaacactcccagataaaaactaatggatgtgttctagc 247  Q
    |||||||||||| || |||||||||||    ||||||||||||||||| |||||||||||||||||||||||| ||||||| || ||| |||||||||||    
T  27255703 ggtgtgttatagtaacatacaccttaaggtgtatttattaactttttagttataacttgctaaaacactcccacataaaaattagtgggtgtgttctagc 27255604  T
Q  248 aaat-ccatatatatata 264  Q
    |||| |||||||||||||    
T  27255603 aaatcccatatatatata 27255586  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 147 - 264
Target Start/End: Original strand, 20201826 - 20201948
Alignment:
Q  147 tagagggtgtgttatagcaagatacaccttaa----tatttattaactttttaattataacttgctaaaacactcccagataaaaactaatggatgtgtt 242  Q
    |||| ||||||||||||||| ||||| |||||    ||||||||||||||||| |||||||||||||||||||||||| ||||||| || ||| ||||||    
T  20201826 tagaaggtgtgttatagcaacatacatcttaaggtctatttattaactttttagttataacttgctaaaacactcccacataaaaattagtgggtgtgtt 20201925  T
Q  243 ctagcaaat-ccatatatatata 264  Q
    ||| ||||| |||||||||||||    
T  20201926 ctaacaaatcccatatatatata 20201948  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 143 - 264
Target Start/End: Original strand, 1805112 - 1805237
Alignment:
Q  143 tttttagagggtgtgttatagcaagatacaccttaa----tatttattaactttttaattataacttgctaaaacactcccagataaaaactaatggatg 238  Q
    |||||| | |||||||||||||||  ||||||||||    ||||||||||||||||| |||||| ||||||||||||||| | |||||||||| ||  ||    
T  1805112 tttttaaaaggtgtgttatagcaacttacaccttaaggtgtatttattaactttttagttataatttgctaaaacactccaacataaaaactagtgagtg 1805211  T
Q  239 tgttctagcaaatccatatatatata 264  Q
    ||||||||||||||| ||||||||||    
T  1805212 tgttctagcaaatccctatatatata 1805237  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 143 - 264
Target Start/End: Original strand, 51465145 - 51465269
Alignment:
Q  143 tttttagagggtgtgttatagcaagatacaccttaa----tatttattaactttttaattataacttgctaaaacactcccagataaaaactaatggatg 238  Q
    |||||||| ||||||||||||||| ||| || ||||    ||||||||||||||||| |||||||||||||||||||| |||  |||||| |||||| ||    
T  51465145 tttttagaaggtgtgttatagcaacatatactttaaggtgtatttattaactttttagttataacttgctaaaacact-ccacgtaaaaattaatgggtg 51465243  T
Q  239 tgttctagcaaatccatatatatata 264  Q
    |||||||||||||| |||||||||||    
T  51465244 tgttctagcaaatctatatatatata 51465269  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 59; E-Value: 7e-25
Query Start/End: Original strand, 179 - 264
Target Start/End: Original strand, 2965348 - 2965434
Alignment:
Q  179 tatttattaactttttaattataacttgctaaaacactcccagataaaaactaatggatgtgttctagcaaatc-catatatatata 264  Q
    ||||||||||||||||| |||||||||||||||||||||| | |||||||||| ||| |||||||||||||||| ||||||||||||    
T  2965348 tatttattaactttttagttataacttgctaaaacactccgacataaaaactagtgggtgtgttctagcaaatctcatatatatata 2965434  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 143 - 264
Target Start/End: Original strand, 12010600 - 12010725
Alignment:
Q  143 tttttagagggtgtgttatagcaagata--caccttaa----tatttattaactttttaattataacttgctaaaacactcccagataaaaactaatgga 236  Q
    |||||||| ||||||||||| ||| |||  ||||||||    |||||||||| |||||| |||||||||||||||||||| ||| |||||||||| |||     
T  12010600 tttttagaaggtgtgttataacaacatatacaccttaaggtgtatttattaattttttagttataacttgctaaaacactgccacataaaaactagtgg- 12010698  T
Q  237 tgtgttctagcaaatccatatatatata 264  Q
     |||||||||||||||||||||||||||    
T  12010699 -gtgttctagcaaatccatatatatata 12010725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 143 - 264
Target Start/End: Complemental strand, 52772305 - 52772181
Alignment:
Q  143 tttttagagggtgtgttatagcaagatacaccttaa----tatttattaactttttaattataacttgctaaaacactcccagataaaaactaatggatg 238  Q
    |||||||| | ||||||||| ||| |||||||||||    ||||||||||||||||| ||||||||| |||||||||||||| |||||||||| ||| ||    
T  52772305 tttttagaagatgtgttata-caacatacaccttaaggtgtatttattaactttttagttataacttactaaaacactcccacataaaaactagtgggtg 52772207  T
Q  239 tgttctagcaaatccatatatatata 264  Q
    ||||||| |||| || ||||||||||    
T  52772206 tgttctaacaaacccctatatatata 52772181  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 143 - 234
Target Start/End: Complemental strand, 16960343 - 16960248
Alignment:
Q  143 tttttagagggtgtgttatagcaagatacaccttaa----tatttattaactttttaattataacttgctaaaacactcccagataaaaactaatg 234  Q
    |||||||| ||||||||||||||| |||||||||||    |||||||||| |||||| ||||| |||||||||||||||||| |||||||||||||    
T  16960343 tttttagaaggtgtgttatagcaacatacaccttaaggtgtatttattaaatttttagttatatcttgctaaaacactcccacataaaaactaatg 16960248  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 154 - 229
Target Start/End: Complemental strand, 14494418 - 14494339
Alignment:
Q  154 tgtgttatagcaagatacaccttaa----tatttattaactttttaattataacttgctaaaacactcccagataaaaac 229  Q
    ||||||||||||| |||||||||||    ||||||||||||||||| |||||||||||||||||||||||| ||||||||    
T  14494418 tgtgttatagcaacatacaccttaaggtgtatttattaactttttagttataacttgctaaaacactcccacataaaaac 14494339  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 203 - 264
Target Start/End: Complemental strand, 8643007 - 8642946
Alignment:
Q  203 cttgctaaaacactcccagataaaaactaatggatgtgttctagcaaatccatatatatata 264  Q
    |||||||||||||||||| |||||||||| ||| ||||||||||||||||||||||||||||    
T  8643007 cttgctaaaacactcccatataaaaactagtgggtgtgttctagcaaatccatatatatata 8642946  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 180 - 264
Target Start/End: Original strand, 15660477 - 15660562
Alignment:
Q  180 atttattaactttttaattataacttgctaaaacactcccagat-aaaaactaatggatgtgttctagcaaatccatatatatata 264  Q
    |||||||||||||||| |||||||||| ||||||||||||| || ||||| || ||| ||||||||||||||||| ||||||||||    
T  15660477 atttattaactttttagttataacttgttaaaacactcccacataaaaaaatagtgggtgtgttctagcaaatccctatatatata 15660562  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 196 - 264
Target Start/End: Complemental strand, 34386368 - 34386299
Alignment:
Q  196 attataacttgctaaaacactcccagataaaaactaatggatgtgttctagcaaatc-catatatatata 264  Q
    ||||||||||||||||||||||||| |||||||||| ||||||| |||||||||||| ||||||||||||    
T  34386368 attataacttgctaaaacactcccacataaaaactagtggatgtattctagcaaatctcatatatatata 34386299  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 152 - 253
Target Start/End: Original strand, 12864424 - 12864529
Alignment:
Q  152 ggtgtgttatagcaagatacaccttaa----tatttattaactttttaattataacttgctaaaacactcccagataaaaactaatggatgtgttctagc 247  Q
    ||||||||||||||| | |||||||||    ||||||||||||||||| |||||||||||||||||||||||| ||||||| || ||| || |||| ||     
T  12864424 ggtgtgttatagcaacaaacaccttaaggtgtatttattaactttttagttataacttgctaaaacactcccatataaaaattagtgggtgcgttccagt 12864523  T
Q  248 aaatcc 253  Q
    ||||||    
T  12864524 aaatcc 12864529  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 143 - 240
Target Start/End: Complemental strand, 27348190 - 27348090
Alignment:
Q  143 tttttagagggtgtgttatagcaagatacaccttaa----tatttattaactttttaattataacttgctaaaacactcccagataaaaactaatggatg 238  Q
    |||||| | ||||||||||||||| |||||||||||    ||||||| ||||||||| |||||||||| |||||| |||||| |||||||||| ||||||    
T  27348190 tttttataaggtgtgttatagcaa-atacaccttaaggtgtatttatcaactttttagttataacttgataaaactctcccacataaaaactagtggatg 27348092  T
Q  239 tg 240  Q
    ||    
T  27348091 tg 27348090  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 204 - 264
Target Start/End: Complemental strand, 32716404 - 32716345
Alignment:
Q  204 ttgctaaaacactcccagataaaaactaatggatgtgttctagcaaatccatatatatata 264  Q
    ||||||||||||||||| |||||||||||||| |||||||||||||| |||||||||||||    
T  32716404 ttgctaaaacactcccacataaaaactaatgggtgtgttctagcaaa-ccatatatatata 32716345  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 209 - 264
Target Start/End: Original strand, 10558271 - 10558326
Alignment:
Q  209 aaaacactcccagataaaaactaatggatgtgttctagcaaatccatatatatata 264  Q
    |||||||||||| |||||||||| ||||||||||||||||||| ||||||||||||    
T  10558271 aaaacactcccacataaaaactagtggatgtgttctagcaaattcatatatatata 10558326  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 179 - 253
Target Start/End: Original strand, 34825579 - 34825653
Alignment:
Q  179 tatttattaactttttaattataacttgctaaaacactcccagataaaaactaatggatgtgttctagcaaatcc 253  Q
    ||||||| ||||||||| | |||| |||||||||||||||||  |||||||||||| |||||||||| |||||||    
T  34825579 tatttatcaactttttagtgataatttgctaaaacactcccacgtaaaaactaatgaatgtgttctaacaaatcc 34825653  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 203 - 264
Target Start/End: Original strand, 463497 - 463558
Alignment:
Q  203 cttgctaaaacactcccagataaaaactaatggatgtgttctagcaaatccatatatatata 264  Q
    |||||||||||||||||| |||||||||| ||| ||||||||||||||||  ||||||||||    
T  463497 cttgctaaaacactcccacataaaaactagtgggtgtgttctagcaaatcactatatatata 463558  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 200 - 264
Target Start/End: Complemental strand, 32374542 - 32374477
Alignment:
Q  200 taacttgctaaaacactcccagataaaaactaatggatgtgttctagcaaatcc-atatatatata 264  Q
    ||||||||||||||||| ||| |||||||||| ||| ||||||||||||||||| |||||||||||    
T  32374542 taacttgctaaaacacttccacataaaaactagtgggtgtgttctagcaaatcctatatatatata 32374477  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 143 - 216
Target Start/End: Original strand, 32716530 - 32716603
Alignment:
Q  143 tttttagagggtgtgttatagcaagatacaccttaatatttattaactttttaattataacttgctaaaacact 216  Q
    |||||||| ||||||||||||||| |||||| |   ||||||||||||||||| |||||||||| |||||||||    
T  32716530 tttttagaaggtgtgttatagcaacatacacatatgtatttattaactttttagttataacttgataaaacact 32716603  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 203 - 264
Target Start/End: Complemental strand, 41146261 - 41146200
Alignment:
Q  203 cttgctaaaacactcccagataaaaactaatggatgtgttctagcaaatccatatatatata 264  Q
    |||||||||||||||||| |||||||||| ||| ||| ||||||||||||| ||||||||||    
T  41146261 cttgctaaaacactcccatataaaaactagtgggtgttttctagcaaatccttatatatata 41146200  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 203 - 264
Target Start/End: Complemental strand, 45818793 - 45818732
Alignment:
Q  203 cttgctaaaacactcccagataaaaactaatggatgtgttctagcaaatccatatatatata 264  Q
    |||||||||||||||| | |||||||||| ||| ||| ||||||||||||||||||||||||    
T  45818793 cttgctaaaacactccgacataaaaactagtgggtgtattctagcaaatccatatatatata 45818732  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 143 - 212
Target Start/End: Original strand, 28094542 - 28094615
Alignment:
Q  143 tttttagagggtgtgttatagcaagatacaccttaa----tatttattaactttttaattataacttgctaaaa 212  Q
    |||||||| |||||||||||| || |||||||||||    ||||||||||||||||| ||||||||||||||||    
T  28094542 tttttagaaggtgtgttatagtaacatacaccttaaagtgtatttattaactttttagttataacttgctaaaa 28094615  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 203 - 264
Target Start/End: Original strand, 13157744 - 13157806
Alignment:
Q  203 cttgctaaaacactcccagataaaaactaatggatgtgttctagcaaat-ccatatatatata 264  Q
    |||||||||||||||||| |||||||||| | | ||||||||||||||| |||||||||||||    
T  13157744 cttgctaaaacactcccacataaaaactagtaggtgtgttctagcaaatcccatatatatata 13157806  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 206 - 264
Target Start/End: Complemental strand, 13385728 - 13385670
Alignment:
Q  206 gctaaaacactcccagataaaaactaatggatgtgttctagcaaatccatatatatata 264  Q
    ||||||||||||||| |||||||||| ||| | |||||||||||| |||||||||||||    
T  13385728 gctaaaacactcccacataaaaactagtgggtatgttctagcaaacccatatatatata 13385670  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 203 - 264
Target Start/End: Original strand, 27787985 - 27788047
Alignment:
Q  203 cttgctaaaacactcccagataaaaac-taatggatgtgttctagcaaatccatatatatata 264  Q
    |||||||||||||||||| |||||||  || ||| ||||||||||||||||||||||||||||    
T  27787985 cttgctaaaacactcccacataaaaaaatagtgggtgtgttctagcaaatccatatatatata 27788047  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 204 - 265
Target Start/End: Original strand, 43236349 - 43236411
Alignment:
Q  204 ttgctaaaacactcccagataaaaactaatggatgtgttctagcaaa-tccatatatatataa 265  Q
    ||||||||||||||||| |||||||||| ||| ||||||||||||||  ||||||||||||||    
T  43236349 ttgctaaaacactcccacataaaaactagtgggtgtgttctagcaaaccccatatatatataa 43236411  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 203 - 264
Target Start/End: Original strand, 50559434 - 50559496
Alignment:
Q  203 cttgctaaaacactcccagataaaaactaatggatgtgttctagcaaat-ccatatatatata 264  Q
    |||||||||||||||| | |||||||||| ||| ||||||||||||||| |||||||||||||    
T  50559434 cttgctaaaacactcctacataaaaactagtgggtgtgttctagcaaatcccatatatatata 50559496  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 204 - 264
Target Start/End: Complemental strand, 1804986 - 1804925
Alignment:
Q  204 ttgctaaaacactcccagataaaaactaatggatgtgttctagcaaatc-catatatatata 264  Q
    ||||||||||||||||| ||||||| |||||| |||||||||||||| | ||||||||||||    
T  1804986 ttgctaaaacactcccacataaaaattaatgggtgtgttctagcaaacctcatatatatata 1804925  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 204 - 264
Target Start/End: Complemental strand, 12864290 - 12864229
Alignment:
Q  204 ttgctaaaacactcccagataaaaactaatggatgtgttctagcaaa-tccatatatatata 264  Q
    ||||||||||||||||| |||||||||| ||| ||||||||||||||  |||||||||||||    
T  12864290 ttgctaaaacactcccacataaaaactactgggtgtgttctagcaaaccccatatatatata 12864229  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 204 - 264
Target Start/End: Original strand, 14494556 - 14494617
Alignment:
Q  204 ttgctaaaacactcccagataaaaactaatggatgtgttctagcaaa-tccatatatatata 264  Q
    ||||||||||||||||| |||||||||| ||| ||||||||||||||  |||||||||||||    
T  14494556 ttgctaaaacactcccacataaaaactagtgggtgtgttctagcaaaccccatatatatata 14494617  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 204 - 264
Target Start/End: Original strand, 20411384 - 20411445
Alignment:
Q  204 ttgctaaaacactcccagataaaaactaatggatgtgttctagcaaa-tccatatatatata 264  Q
    ||||||||||||||||| |||||||||| ||| ||||||||||||||  |||||||||||||    
T  20411384 ttgctaaaacactcccacataaaaactagtgggtgtgttctagcaaaccccatatatatata 20411445  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 203 - 264
Target Start/End: Original strand, 24770814 - 24770875
Alignment:
Q  203 cttgctaaaacactcccagataaaaactaatggatgtgttctagcaaatccatatatatata 264  Q
    ||||||||||||||| || |||||||||| ||  ||||||||| ||||||||||||||||||    
T  24770814 cttgctaaaacactctcacataaaaactagtgagtgtgttctaccaaatccatatatatata 24770875  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 203 - 264
Target Start/End: Original strand, 32994355 - 32994416
Alignment:
Q  203 cttgctaaaacactcccagataaaaactaatggatgtgttctagcaaatccatatatatata 264  Q
    |||||||||||||||||| |||||||||| ||| ||||||||||||||   |||||||||||    
T  32994355 cttgctaaaacactcccacataaaaactagtgggtgtgttctagcaaaaatatatatatata 32994416  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 200 - 264
Target Start/End: Complemental strand, 51431859 - 51431794
Alignment:
Q  200 taacttgctaaaacactcccagataaaaactaatggatgtgttctagcaaat-ccatatatatata 264  Q
    ||||||||||||||||||| | |||||||||| ||| |||||||| |||||| |||||||||||||    
T  51431859 taacttgctaaaacactccaacataaaaactagtgggtgtgttctggcaaatcccatatatatata 51431794  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 204 - 264
Target Start/End: Complemental strand, 28094429 - 28094369
Alignment:
Q  204 ttgctaaaacactcccagataaaaactaatggatgtgttctagcaaatccatatatatata 264  Q
    ||||||||||||||||| ||||||| || ||| ||||||||||||||  ||||||||||||    
T  28094429 ttgctaaaacactcccacataaaaattagtgggtgtgttctagcaaactcatatatatata 28094369  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 213 - 264
Target Start/End: Complemental strand, 12705781 - 12705730
Alignment:
Q  213 cactcccagataaaaactaatggatgtgttctagcaaatccatatatatata 264  Q
    |||||||| |||||||||| | | ||||||||||||||||||||||||||||    
T  12705781 cactcccacataaaaactagttggtgtgttctagcaaatccatatatatata 12705730  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 203 - 253
Target Start/End: Original strand, 14387438 - 14387488
Alignment:
Q  203 cttgctaaaacactcccagataaaaactaatggatgtgttctagcaaatcc 253  Q
    |||||||| ||||||||| |||| ||||||||| |||||||||||||||||    
T  14387438 cttgctaacacactcccacataagaactaatgggtgtgttctagcaaatcc 14387488  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #48
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 203 - 253
Target Start/End: Original strand, 34515315 - 34515365
Alignment:
Q  203 cttgctaaaacactcccagataaaaactaatggatgtgttctagcaaatcc 253  Q
    |||||||||||||||||| |||||||||| ||| |||||| ||||||||||    
T  34515315 cttgctaaaacactcccacataaaaactagtgggtgtgttatagcaaatcc 34515365  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #49
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 208 - 264
Target Start/End: Original strand, 13943453 - 13943510
Alignment:
Q  208 taaaacactcccagataaaaactaatggatgtgttctagcaaa-tccatatatatata 264  Q
    ||||||||||||| |||||||||| ||| ||||||||||||||  |||||||||||||    
T  13943453 taaaacactcccacataaaaactagtgggtgtgttctagcaaaccccatatatatata 13943510  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #50
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 203 - 264
Target Start/End: Complemental strand, 23413648 - 23413587
Alignment:
Q  203 cttgctaaaacactcccagataaaaactaatggatgtgttctagcaaatccatatatatata 264  Q
    ||||||||||||| |||| |||||||||| ||| ||| ||||||||||  ||||||||||||    
T  23413648 cttgctaaaacacccccacataaaaactagtgggtgtcttctagcaaactcatatatatata 23413587  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #51
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 203 - 252
Target Start/End: Complemental strand, 32155994 - 32155945
Alignment:
Q  203 cttgctaaaacactcccagataaaaactaatggatgtgttctagcaaatc 252  Q
    |||||||||||| || || |||||||||||||| ||||||||||||||||    
T  32155994 cttgctaaaacattcacacataaaaactaatgggtgtgttctagcaaatc 32155945  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #52
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 179 - 239
Target Start/End: Complemental strand, 50797685 - 50797624
Alignment:
Q  179 tatttattaactttttaattataacttgctaaaacactc-ccagataaaaactaatggatgt 239  Q
    ||||| ||||||||||| |||||||||||||||||||||   | ||||||||||||||||||    
T  50797685 tatttgttaactttttagttataacttgctaaaacactcataacataaaaactaatggatgt 50797624  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #53
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 204 - 264
Target Start/End: Original strand, 52772425 - 52772486
Alignment:
Q  204 ttgctaaaacactcccagataaaaactaatggatgtgttctagcaaa-tccatatatatata 264  Q
    ||||||||||||||| | ||||||| |||||| ||||||||||||||  |||||||||||||    
T  52772425 ttgctaaaacactcctacataaaaattaatgggtgtgttctagcaaaccccatatatatata 52772486  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #54
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 204 - 264
Target Start/End: Original strand, 14387587 - 14387647
Alignment:
Q  204 ttgctaaaacactcccagataaaaactaatggatgtgttctagcaaatccatatatatata 264  Q
    |||||||||||||| ||   |||||||| ||| |||||||||||||| |||||||||||||    
T  14387587 ttgctaaaacactcacacggaaaaactagtgggtgtgttctagcaaacccatatatatata 14387647  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #55
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 203 - 263
Target Start/End: Complemental strand, 16005575 - 16005515
Alignment:
Q  203 cttgctaaaacactcccagataaaaactaatggatgtgttctagcaaatccatatatatat 263  Q
    |||| ||||||||| | | |||||||||| ||| ||||||||||||||||| |||||||||    
T  16005575 cttgttaaaacacttctacataaaaactagtgggtgtgttctagcaaatccctatatatat 16005515  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #56
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 203 - 261
Target Start/End: Complemental strand, 13264542 - 13264486
Alignment:
Q  203 cttgctaaaacactcccagataaaaactaatggatgtgttctagcaaatccatatatat 261  Q
    ||||||||||||||||||    ||||||| ||| |||||||||||||||||||||||||    
T  13264542 cttgctaaaacactcccact--aaaactagtgggtgtgttctagcaaatccatatatat 13264486  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #57
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 143 - 214
Target Start/End: Original strand, 24190864 - 24190940
Alignment:
Q  143 tttttagagggtgtgttatagcaagatacaccttaa----tatttattaactttttaattataact-tgctaaaaca 214  Q
    |||||||| ||||||||||||||| |||||||| ||    ||||||| ||||| |||||||||||| ||||||||||    
T  24190864 tttttagaaggtgtgttatagcaacatacacctcaaggtgtatttatgaacttcttaattataactctgctaaaaca 24190940  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #58
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 204 - 252
Target Start/End: Original strand, 3979563 - 3979612
Alignment:
Q  204 ttgctaaaacactcccaga-taaaaactaatggatgtgttctagcaaatc 252  Q
    ||||||||||||||||| | ||||||||| ||| ||||||||||||||||    
T  3979563 ttgctaaaacactcccacaataaaaactagtgggtgtgttctagcaaatc 3979612  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #59
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 204 - 264
Target Start/End: Complemental strand, 12010520 - 12010460
Alignment:
Q  204 ttgctaaaacactcccagataaaaactaatggatgtgttctagcaaat-ccatatatatata 264  Q
    ||||||||| ||||||| ||||||| || ||| ||||||||||||||| |||||||||||||    
T  12010520 ttgctaaaa-actcccacataaaaattagtgggtgtgttctagcaaatcccatatatatata 12010460  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #60
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 203 - 264
Target Start/End: Complemental strand, 28454716 - 28454652
Alignment:
Q  203 cttgctaaaacactcccagat--aaaaactaatggatgtgttctagcaaat-ccatatatatata 264  Q
    |||||||||||||||||| ||  |||||||| ||| |||| |||||||||| |||||||||||||    
T  28454716 cttgctaaaacactcccacataaaaaaactagtgggtgtgctctagcaaatcccatatatatata 28454652  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #61
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 204 - 264
Target Start/End: Original strand, 36817837 - 36817898
Alignment:
Q  204 ttgctaaaacactcccagataaaaactaatggatgtgttctagcaaatcc-atatatatata 264  Q
    |||||||||||||| || |||||||||| ||  |||||||||||||| || |||||||||||    
T  36817837 ttgctaaaacactctcacataaaaactagtgagtgtgttctagcaaaccctatatatatata 36817898  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0068 (Bit Score: 69; Significance: 7e-31; HSPs: 2)
Name: scaffold0068
Description:

Target: scaffold0068; HSP #1
Raw Score: 69; E-Value: 7e-31
Query Start/End: Original strand, 147 - 264
Target Start/End: Original strand, 58034 - 58155
Alignment:
Q  147 tagagggtgtgttatagcaagatacaccttaa----tatttattaactttttaattataacttgctaaaacactcccagataaaaactaatggatgtgtt 242  Q
    |||| ||||||||||||||| |||||||||||    |||||||| |||||||| |||||||||||||||||||||||| ||||||| || ||| ||||||    
T  58034 tagaaggtgtgttatagcaacatacaccttaaggtgtatttattcactttttagttataacttgctaaaacactcccacataaaaattagtgggtgtgtt 58133  T
Q  243 ctagcaaatccatatatatata 264  Q
    ||||||||||| ||||||||||    
T  58134 ctagcaaatccctatatatata 58155  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0068; HSP #2
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 204 - 264
Target Start/End: Complemental strand, 57903 - 57842
Alignment:
Q  204 ttgctaaaacactcccagataaaaactaatggatgtgttctagcaaa-tccatatatatata 264  Q
    ||||||||||||||||| |||||||||| ||| ||||||||||||||  |||||||||||||    
T  57903 ttgctaaaacactcccacataaaaactagtgggtgtgttctagcaaaccccatatatatata 57842  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0074 (Bit Score: 68; Significance: 3e-30; HSPs: 2)
Name: scaffold0074
Description:

Target: scaffold0074; HSP #1
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 147 - 263
Target Start/End: Complemental strand, 26110 - 25990
Alignment:
Q  147 tagagggtgtgttatagcaagatacaccttaa----tatttattaactttttaattataacttgctaaaacactcccagataaaaactaatggatgtgtt 242  Q
    |||| ||||||||||||||| |||||||||||    ||||||||||||||||| |||||||||| ||||||||||||| ||||||| || ||| ||||||    
T  26110 tagaaggtgtgttatagcaacatacaccttaaggtgtatttattaactttttagttataacttgttaaaacactcccacataaaaattattgggtgtgtt 26011  T
Q  243 ctagcaaatccatatatatat 263  Q
    ||||||||||| |||||||||    
T  26010 ctagcaaatccctatatatat 25990  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0074; HSP #2
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 204 - 264
Target Start/End: Original strand, 26241 - 26302
Alignment:
Q  204 ttgctaaaacactcccagataaaaactaatggatgtgttctagc-aaatccatatatatata 264  Q
    ||||||||||||||||| |||||||||| ||| ||||||||||| ||  |||||||||||||    
T  26241 ttgctaaaacactcccacataaaaactagtgggtgtgttctagcgaaccccatatatatata 26302  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0002 (Bit Score: 62; Significance: 1e-26; HSPs: 2)
Name: scaffold0002
Description:

Target: scaffold0002; HSP #1
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 143 - 264
Target Start/End: Complemental strand, 452429 - 452304
Alignment:
Q  143 tttttagagggtgtgttatagcaagatacaccttaa----tatttattaactttttaattataacttgctaaaacactcccagataaaaactaatggatg 238  Q
    |||||||| ||||||||||||||| |||||||||||    ||||||||||||||||| |||||| |||||||| ||||| || |||||||||| ||| ||    
T  452429 tttttagaaggtgtgttatagcaacatacaccttaaggtgtatttattaactttttagttataatttgctaaa-cactctcacataaaaactagtgggtg 452331  T
Q  239 tgttctagcaaat-ccatatatatata 264  Q
    ||||||||||||| |||||||||||||    
T  452330 tgttctagcaaatcccatatatatata 452304  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0002; HSP #2
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 204 - 264
Target Start/End: Original strand, 452555 - 452615
Alignment:
Q  204 ttgctaaaacactcccagataaaaactaatggatgtgttctagcaaatccatatatatata 264  Q
    ||||||||||||||||| |||||||||| ||| |||||||||||||| || ||||||||||    
T  452555 ttgctaaaacactcccacataaaaactagtgggtgtgttctagcaaacccctatatatata 452615  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0778 (Bit Score: 59; Significance: 7e-25; HSPs: 1)
Name: scaffold0778
Description:

Target: scaffold0778; HSP #1
Raw Score: 59; E-Value: 7e-25
Query Start/End: Original strand, 179 - 264
Target Start/End: Complemental strand, 6294 - 6208
Alignment:
Q  179 tatttattaactttttaattataacttgctaaaacactcccagataaaaactaatggatgtgttctagcaaatcc-atatatatata 264  Q
    ||||||||||||||||| |||||||||||||||||||||||| ||||||| || ||| ||||||||||||||||| |||||||||||    
T  6294 tatttattaactttttagttataacttgctaaaacactcccacataaaaattagtgggtgtgttctagcaaatcctatatatatata 6208  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0031 (Bit Score: 59; Significance: 7e-25; HSPs: 1)
Name: scaffold0031
Description:

Target: scaffold0031; HSP #1
Raw Score: 59; E-Value: 7e-25
Query Start/End: Original strand, 146 - 253
Target Start/End: Complemental strand, 82802 - 82691
Alignment:
Q  146 ttagagggtgtgttatagcaagatacaccttaa----tatttattaactttttaattataacttgctaaaacactcccagataaaaactaatggatgtgt 241  Q
    ||||| ||||||||||||||| |||||||||||    ||||||||||||||||| |||||||||||||||| ||||||| ||||||||   ||| |||||    
T  82802 ttagaaggtgtgttatagcaacatacaccttaaggtgtatttattaactttttagttataacttgctaaaatactcccacataaaaacggttgggtgtgt 82703  T
Q  242 tctagcaaatcc 253  Q
    ||||||||||||    
T  82702 tctagcaaatcc 82691  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0119 (Bit Score: 55; Significance: 2e-22; HSPs: 2)
Name: scaffold0119
Description:

Target: scaffold0119; HSP #1
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 143 - 258
Target Start/End: Original strand, 2865 - 2984
Alignment:
Q  143 tttttagagggtgtgttatagcaagatacaccttaa----tatttattaactttttaattataacttgctaaaacactcccagataaaaactaatggatg 238  Q
    |||||||| ||||||||||| ||| ||||| |||||    ||||||||||||||||| |||||||||||||||||||| ||| |||||||||| | | ||    
T  2865 tttttagaaggtgtgttataacaacatacatcttaagatgtatttattaactttttagttataacttgctaaaacacttccatataaaaactagttggtg 2964  T
Q  239 tgttctagcaaatccatata 258  Q
    ||||||| ||||||| ||||    
T  2965 tgttctatcaaatccctata 2984  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0119; HSP #2
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 143 - 258
Target Start/End: Original strand, 14920 - 15039
Alignment:
Q  143 tttttagagggtgtgttatagcaagatacaccttaa----tatttattaactttttaattataacttgctaaaacactcccagataaaaactaatggatg 238  Q
    |||||||| ||||||||||| ||| ||||| |||||    ||||||||||||||||| |||||||||||||||||||| ||| |||||||||| | | ||    
T  14920 tttttagaaggtgtgttataacaacatacatcttaagatgtatttattaactttttagttataacttgctaaaacacttccatataaaaactagttggtg 15019  T
Q  239 tgttctagcaaatccatata 258  Q
    ||||||| ||||||| ||||    
T  15020 tgttctatcaaatccctata 15039  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0069 (Bit Score: 45; Significance: 1e-16; HSPs: 1)
Name: scaffold0069
Description:

Target: scaffold0069; HSP #1
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 181 - 264
Target Start/End: Original strand, 14907 - 14991
Alignment:
Q  181 tttattaactttttaattataacttgctaaaacactcccagataaaaactaatggatgtgttctagcaaat-ccatatatatata 264  Q
    |||| |||||||||| |||||||||| |||||||||||||  |||||| || ||| ||||||||||||||| |||||||||||||    
T  14907 tttaataactttttagttataacttgttaaaacactcccacgtaaaaagtagtgggtgtgttctagcaaatcccatatatatata 14991  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1259 (Bit Score: 42; Significance: 0.000000000000009; HSPs: 1)
Name: scaffold1259
Description:

Target: scaffold1259; HSP #1
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 211 - 264
Target Start/End: Original strand, 1 - 54
Alignment:
Q  211 aacactcccagataaaaactaatggatgtgttctagcaaatccatatatatata 264  Q
    |||||||||| |||||||||| ||| ||||||||||||||||||||||||||||    
T  1 aacactcccacataaaaactagtgggtgtgttctagcaaatccatatatatata 54  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0217 (Bit Score: 38; Significance: 0.000000000002; HSPs: 1)
Name: scaffold0217
Description:

Target: scaffold0217; HSP #1
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 203 - 263
Target Start/End: Original strand, 20805 - 20866
Alignment:
Q  203 cttgctaaaacactcccagataaaaactaatggatgtgttctagcaaat-ccatatatatat 263  Q
    |||||||||||||||||| ||||||| || ||| ||||||||||||||| ||||||||||||    
T  20805 cttgctaaaacactcccacataaaaattagtgggtgtgttctagcaaatcccatatatatat 20866  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0015 (Bit Score: 35; Significance: 0.0000000001; HSPs: 1)
Name: scaffold0015
Description:

Target: scaffold0015; HSP #1
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 203 - 264
Target Start/End: Original strand, 9918 - 9979
Alignment:
Q  203 cttgctaaaacactcccagataaaaactaatggatgtgttctagcaaat-ccatatatatata 264  Q
    |||||||||||||||| | |||||||||| ||| ||||||||||||||| |||||||||||||    
T  9918 cttgctaaaacactcctacataaaaactagtgg-tgtgttctagcaaatcccatatatatata 9979  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0009 (Bit Score: 33; Significance: 0.000000002; HSPs: 1)
Name: scaffold0009
Description:

Target: scaffold0009; HSP #1
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 180 - 264
Target Start/End: Complemental strand, 65982 - 65898
Alignment:
Q  180 atttattaactttttaattataacttgctaaaacactcccagataaaaactaatggatgtgttctagcaaatccatatatatata 264  Q
    |||||| ||||||||| |||||| ||||||||||| ||| | |||||||||||| | |  ||  | |||||||||||||||||||    
T  65982 atttatcaactttttagttataaattgctaaaacaatccaacataaaaactaataggtacgtaatggcaaatccatatatatata 65898  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0325 (Bit Score: 31; Significance: 0.00000003; HSPs: 1)
Name: scaffold0325
Description:

Target: scaffold0325; HSP #1
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 203 - 249
Target Start/End: Complemental strand, 6550 - 6504
Alignment:
Q  203 cttgctaaaacactcccagataaaaactaatggatgtgttctagcaa 249  Q
    |||||||||||||| ||| |||||||||| ||| |||||||||||||    
T  6550 cttgctaaaacacttccacataaaaactagtgggtgtgttctagcaa 6504  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



© Oklahoma State University