View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF10182_low_15 (Length: 335)
Name: NF10182_low_15
Description: NF10182
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF10182_low_15 |
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Alignment Details
Target: chr2 (Bit Score: 303; Significance: 1e-170; HSPs: 1)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 303; E-Value: 1e-170
Query Start/End: Original strand, 17 - 323
Target Start/End: Original strand, 37116967 - 37117273
Alignment:
| Q |
17 |
aaaatagaataaactaaatccaccatatagtcaaataaatattcaaattcaattcaattatcaaaaacatttaacaaggttccttaaacaatactcctcc |
116 |
Q |
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| T |
37116967 |
aaaatagaataaactaaatccactatatagtcaaataaatattcaaattcaattcaattatcaaaaacatttaacaaggttccttaaacaatactcctcc |
37117066 |
T |
|
| Q |
117 |
taaagtaataatcttgaagcaagtaaattataaacaaaagatatagaagatgaaactacccacttggaagggagaccaaatctttatgcaatccatgaga |
216 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
37117067 |
taaagtaataatcttgaagcaagtaaattataaacaaaagatatagaagatgaaactacccacttggaagggagaccaaatctttatgcaatccatgaga |
37117166 |
T |
|
| Q |
217 |
gacatcaccaccactacccacttgactttgattgtgatcaaccacatgcatcattgtctttgttcttttaacagaaaacccaccaaggaaaacccatttc |
316 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
37117167 |
gacatcaccaccactacccacttgactttgattgtgatcaaccacatgcatcattgtctttgttcttttaacagaaaacccaccaaggaaaacccatttc |
37117266 |
T |
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| Q |
317 |
tgtgctc |
323 |
Q |
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||||||| |
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| T |
37117267 |
tgtgctc |
37117273 |
T |
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