View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF10182_low_24 (Length: 262)
Name: NF10182_low_24
Description: NF10182
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF10182_low_24 |
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Alignment Details
Target: chr7 (Bit Score: 59; Significance: 4e-25; HSPs: 2)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 115 - 173
Target Start/End: Original strand, 441935 - 441993
Alignment:
| Q |
115 |
aggggttaagcaaaattatatagaaagcagagtacaatttatataaattaaactcttct |
173 |
Q |
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| T |
441935 |
aggggttaagcaaaattatatagaaagcagagtacaatttatataaattaaactcttct |
441993 |
T |
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Target: chr7; HSP #2
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 14 - 66
Target Start/End: Original strand, 441834 - 441886
Alignment:
| Q |
14 |
gttgaaagaaaacagaacacgattgtgatactagggatttaattaatgctagg |
66 |
Q |
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| T |
441834 |
gttgaaagaaaacagaacacgattgtgatactaggggtttaattaatgctagg |
441886 |
T |
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