View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF10182_low_26 (Length: 250)

Name: NF10182_low_26
Description: NF10182
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF10182_low_26
NF10182_low_26
[»] chr5 (60 HSPs)
chr5 (11-239)||(26716359-26716588)
chr5 (11-239)||(26986099-26986328)
chr5 (23-198)||(25749734-25749909)
chr5 (11-239)||(27938245-27938474)
chr5 (11-239)||(3934590-3934820)
chr5 (20-235)||(43357571-43357787)
chr5 (11-239)||(1795478-1795708)
chr5 (19-198)||(42365917-42366097)
chr5 (82-239)||(17138128-17138286)
chr5 (82-234)||(5612316-5612469)
chr5 (11-135)||(14836523-14836647)
chr5 (45-188)||(35746158-35746300)
chr5 (20-239)||(7629145-7629352)
chr5 (83-234)||(26691707-26691859)
chr5 (83-234)||(26961439-26961591)
chr5 (83-239)||(30284480-30284639)
chr5 (83-198)||(18001841-18001955)
chr5 (88-198)||(11694331-11694440)
chr5 (83-189)||(41233447-41233549)
chr5 (17-179)||(22737985-22738168)
chr5 (83-189)||(27085486-27085592)
chr5 (17-84)||(26691881-26691948)
chr5 (17-84)||(26961613-26961680)
chr5 (20-81)||(3701331-3701392)
chr5 (16-84)||(11907555-11907623)
chr5 (20-84)||(1921024-1921089)
chr5 (20-84)||(27085613-27085677)
chr5 (83-179)||(5722124-5722220)
chr5 (20-84)||(10657222-10657286)
chr5 (20-84)||(15066455-15066519)
chr5 (20-84)||(17138044-17138108)
chr5 (20-72)||(30284397-30284449)
chr5 (23-84)||(39690011-39690071)
chr5 (15-84)||(6242815-6242886)
chr5 (20-72)||(21251738-21251790)
chr5 (20-84)||(30777200-30777264)
chr5 (25-84)||(1639072-1639130)
chr5 (20-84)||(5722241-5722305)
chr5 (25-84)||(26794284-26794342)
chr5 (23-84)||(9793074-9793134)
chr5 (156-189)||(30284624-30284657)
chr5 (156-189)||(34032437-34032470)
chr5 (156-192)||(11906283-11906319)
chr5 (207-239)||(19321459-19321491)
chr5 (28-72)||(33830550-33830593)
chr5 (159-189)||(7629127-7629157)
chr5 (156-189)||(3934805-3934838)
chr5 (20-65)||(5985755-5985800)
chr5 (156-189)||(17138271-17138304)
chr5 (156-189)||(21251533-21251566)
chr5 (156-189)||(26691684-26691717)
chr5 (156-189)||(26716341-26716374)
chr5 (156-189)||(26961416-26961449)
chr5 (156-189)||(26986081-26986114)
chr5 (158-191)||(30777541-30777574)
chr5 (158-191)||(32707850-32707883)
chr5 (158-191)||(32728728-32728761)
chr5 (207-243)||(3701280-3701316)
chr5 (25-65)||(9729431-9729471)
chr5 (17-49)||(39796753-39796785)
[»] chr2 (53 HSPs)
chr2 (20-239)||(4561874-4562095)
chr2 (11-239)||(14824224-14824454)
chr2 (11-237)||(1005600-1005827)
chr2 (15-239)||(8482724-8482949)
chr2 (16-239)||(44156683-44156908)
chr2 (17-239)||(3563926-3564149)
chr2 (11-239)||(28746464-28746684)
chr2 (16-239)||(1776245-1776468)
chr2 (11-188)||(5588176-5588353)
chr2 (11-198)||(24585662-24585851)
chr2 (15-184)||(40431829-40431997)
chr2 (11-160)||(4355478-4355627)
chr2 (20-239)||(2319361-2319603)
chr2 (82-239)||(34146266-34146424)
chr2 (85-198)||(14217027-14217140)
chr2 (82-198)||(21104610-21104726)
chr2 (86-235)||(35342407-35342558)
chr2 (83-198)||(3545455-3545570)
chr2 (86-239)||(12206111-12206264)
chr2 (20-239)||(31235976-31236218)
chr2 (17-81)||(18301362-18301426)
chr2 (16-84)||(35342581-35342649)
chr2 (25-84)||(5371339-5371398)
chr2 (17-72)||(20537115-20537170)
chr2 (152-239)||(35996729-35996816)
chr2 (83-179)||(9293252-9293348)
chr2 (20-84)||(12819579-12819643)
chr2 (83-197)||(10573623-10573737)
chr2 (15-84)||(45158961-45159030)
chr2 (23-84)||(4169802-4169862)
chr2 (23-84)||(6496953-6497013)
chr2 (28-89)||(21104742-21104803)
chr2 (23-84)||(22485045-22485105)
chr2 (23-84)||(40308118-40308178)
chr2 (17-72)||(34146456-34146511)
chr2 (156-189)||(3563908-3563941)
chr2 (23-84)||(7807137-7807197)
chr2 (156-189)||(44156665-44156698)
chr2 (17-61)||(9293649-9293693)
chr2 (158-189)||(34146248-34146279)
chr2 (158-189)||(40497404-40497435)
chr2 (42-84)||(6124949-6124991)
chr2 (158-192)||(22484332-22484366)
chr2 (160-189)||(4355393-4355422)
chr2 (158-191)||(7876780-7876813)
chr2 (158-191)||(16561866-16561899)
chr2 (156-189)||(31236203-31236236)
chr2 (158-191)||(33324884-33324917)
chr2 (158-191)||(38602341-38602374)
chr2 (158-191)||(40308916-40308949)
chr2 (161-198)||(40536361-40536398)
chr2 (17-49)||(12206264-12206296)
chr2 (17-45)||(40536498-40536526)
[»] chr4 (58 HSPs)
chr4 (11-239)||(31946030-31946258)
chr4 (11-239)||(36511736-36511966)
chr4 (11-194)||(51858927-51859110)
chr4 (11-198)||(1177105-1177292)
chr4 (11-239)||(40694156-40694385)
chr4 (11-197)||(47607242-47607416)
chr4 (16-239)||(2586422-2586648)
chr4 (16-239)||(24793517-24793763)
chr4 (83-239)||(17892334-17892491)
chr4 (5-192)||(51674923-51675110)
chr4 (16-198)||(3109091-3109295)
chr4 (83-239)||(36943755-36943912)
chr4 (83-234)||(46431808-46431960)
chr4 (83-188)||(49470419-49470523)
chr4 (83-198)||(42630359-42630474)
chr4 (83-181)||(44521921-44522019)
chr4 (83-239)||(37992409-37992565)
chr4 (82-198)||(754298-754414)
chr4 (25-181)||(14614651-14614805)
chr4 (16-84)||(36943933-36944001)
chr4 (17-84)||(5835207-5835274)
chr4 (20-79)||(44521836-44521895)
chr4 (15-84)||(39957952-39958021)
chr4 (16-84)||(17892512-17892580)
chr4 (20-84)||(28377274-28377338)
chr4 (16-84)||(42630264-42630332)
chr4 (20-84)||(52721618-52721682)
chr4 (20-84)||(55900938-55901002)
chr4 (23-84)||(41146382-41146442)
chr4 (23-81)||(53323120-53323177)
chr4 (11-79)||(258872-258941)
chr4 (23-84)||(3402854-3402914)
chr4 (15-84)||(24784636-24784705)
chr4 (15-84)||(24823561-24823630)
chr4 (83-179)||(55901023-55901120)
chr4 (154-189)||(51858900-51858935)
chr4 (148-198)||(726496-726546)
chr4 (23-73)||(52572974-52573023)
chr4 (17-50)||(7952920-7952953)
chr4 (23-84)||(8063377-8063437)
chr4 (23-72)||(31227130-31227178)
chr4 (23-72)||(38492042-38492090)
chr4 (20-65)||(49470559-49470604)
chr4 (156-188)||(21637734-21637766)
chr4 (82-153)||(722504-722575)
chr4 (159-189)||(4400536-4400566)
chr4 (83-117)||(24784581-24784615)
chr4 (83-117)||(24823651-24823685)
chr4 (17-55)||(30683469-30683507)
chr4 (159-189)||(40694138-40694168)
chr4 (83-117)||(52721563-52721597)
chr4 (158-191)||(5325740-5325773)
chr4 (27-84)||(14795785-14795841)
chr4 (158-191)||(19738763-19738796)
chr4 (158-191)||(52122888-52122921)
chr4 (207-239)||(21637751-21637783)
chr4 (156-192)||(39957629-39957665)
chr4 (158-190)||(53322404-53322436)
[»] chr7 (70 HSPs)
chr7 (11-237)||(23969929-23970156)
chr7 (11-239)||(554693-554922)
chr7 (11-181)||(48153687-48153857)
chr7 (11-239)||(21409474-21409702)
chr7 (11-239)||(26973136-26973369)
chr7 (29-234)||(24956339-24956543)
chr7 (83-239)||(21179919-21180076)
chr7 (83-239)||(40041462-40041618)
chr7 (15-134)||(36413559-36413677)
chr7 (83-198)||(36757891-36758006)
chr7 (83-198)||(36767415-36767530)
chr7 (82-198)||(1400142-1400258)
chr7 (82-191)||(15878298-15878407)
chr7 (83-191)||(23078984-23079092)
chr7 (83-239)||(35159948-35160104)
chr7 (83-176)||(36763671-36763764)
chr7 (83-239)||(44960010-44960167)
chr7 (17-84)||(19510889-19510956)
chr7 (17-239)||(44269808-44270048)
chr7 (20-84)||(38064931-38064996)
chr7 (20-84)||(1042858-1042922)
chr7 (17-84)||(1400055-1400122)
chr7 (83-232)||(33454160-33454310)
chr7 (83-234)||(38064753-38064906)
chr7 (16-84)||(15878210-15878278)
chr7 (20-84)||(16564031-16564095)
chr7 (20-84)||(16601567-16601631)
chr7 (20-84)||(23078899-23078963)
chr7 (20-84)||(33454331-33454395)
chr7 (20-82)||(4291937-4291998)
chr7 (19-84)||(19820787-19820852)
chr7 (20-84)||(26773371-26773435)
chr7 (23-84)||(27354218-27354278)
chr7 (23-84)||(27555127-27555187)
chr7 (20-84)||(9250101-9250165)
chr7 (20-84)||(9283651-9283715)
chr7 (20-84)||(25969768-25969832)
chr7 (20-84)||(36757802-36757870)
chr7 (20-84)||(36763581-36763649)
chr7 (20-84)||(36767326-36767394)
chr7 (20-83)||(35160124-35160191)
chr7 (23-81)||(36661244-36661301)
chr7 (23-84)||(48163705-48163765)
chr7 (20-84)||(8029073-8029137)
chr7 (25-84)||(11830465-11830523)
chr7 (156-198)||(19820881-19820923)
chr7 (23-84)||(16851080-16851140)
chr7 (23-84)||(27397399-27397459)
chr7 (23-84)||(47238031-47238092)
chr7 (156-188)||(35159931-35159963)
chr7 (156-191)||(38064658-38064693)
chr7 (158-192)||(27555388-27555422)
chr7 (207-237)||(27688010-27688040)
chr7 (83-117)||(47719963-47719997)
chr7 (156-189)||(1363029-1363062)
chr7 (158-191)||(9250441-9250474)
chr7 (156-189)||(23311787-23311820)
chr7 (158-191)||(25969460-25969493)
chr7 (158-191)||(27353984-27354017)
chr7 (158-191)||(34122636-34122669)
chr7 (158-191)||(39520852-39520885)
chr7 (23-72)||(40096447-40096495)
chr7 (158-191)||(42897054-42897087)
chr7 (16-61)||(44959123-44959168)
chr7 (158-191)||(48163471-48163504)
chr7 (208-236)||(3393074-3393102)
chr7 (207-239)||(7416697-7416729)
chr7 (87-119)||(11058652-11058684)
chr7 (207-239)||(23311805-23311837)
chr7 (208-236)||(36891855-36891883)
[»] chr6 (34 HSPs)
chr6 (11-239)||(19128239-19128468)
chr6 (11-198)||(234437-234624)
chr6 (11-182)||(27084118-27084289)
chr6 (83-239)||(7255006-7255164)
chr6 (20-198)||(10894309-10894509)
chr6 (83-191)||(13045251-13045359)
chr6 (82-239)||(6707915-6708073)
chr6 (86-198)||(31079730-31079839)
chr6 (82-198)||(13607659-13607775)
chr6 (107-234)||(26327245-26327373)
chr6 (82-189)||(13061248-13061355)
chr6 (17-84)||(31740489-31740556)
chr6 (82-239)||(11105372-11105530)
chr6 (20-84)||(7255185-7255250)
chr6 (16-72)||(22988912-22988968)
chr6 (16-72)||(23799428-23799484)
chr6 (16-84)||(26327559-26327627)
chr6 (17-84)||(32130332-32130399)
chr6 (15-84)||(32018360-32018429)
chr6 (20-84)||(3212833-3212897)
chr6 (20-72)||(6707830-6707882)
chr6 (23-84)||(7188059-7188119)
chr6 (16-81)||(11105554-11105619)
chr6 (23-84)||(31195631-31195691)
chr6 (21-72)||(13045172-13045223)
chr6 (17-84)||(13607565-13607632)
chr6 (23-84)||(1036096-1036156)
chr6 (28-84)||(8357657-8357712)
chr6 (16-84)||(13061160-13061228)
chr6 (83-117)||(3212778-3212812)
chr6 (158-191)||(3212543-3212576)
chr6 (158-191)||(31195888-31195921)
chr6 (207-235)||(26560889-26560917)
chr6 (158-190)||(32130678-32130710)
[»] chr8 (53 HSPs)
chr8 (11-198)||(3892092-3892279)
chr8 (47-198)||(37372388-37372539)
chr8 (86-239)||(32425007-32425161)
chr8 (16-198)||(27968233-27968424)
chr8 (20-179)||(5818143-5818292)
chr8 (85-198)||(7411730-7411843)
chr8 (16-198)||(28025219-28025410)
chr8 (16-239)||(27886276-27886509)
chr8 (16-239)||(27944934-27945167)
chr8 (17-239)||(20182459-20182698)
chr8 (83-197)||(38388796-38388910)
chr8 (20-84)||(6028867-6028931)
chr8 (20-84)||(27108985-27109049)
chr8 (20-84)||(32877832-32877896)
chr8 (17-84)||(19436629-19436696)
chr8 (17-84)||(19572778-19572845)
chr8 (17-84)||(19947649-19947716)
chr8 (11-72)||(32856-32917)
chr8 (88-234)||(29355714-29355862)
chr8 (23-84)||(5540198-5540258)
chr8 (23-84)||(12579818-12579878)
chr8 (23-84)||(32760131-32760191)
chr8 (23-84)||(36484200-36484260)
chr8 (20-83)||(7411867-7411930)
chr8 (23-84)||(28875847-28875907)
chr8 (15-84)||(40412807-40412876)
chr8 (23-72)||(45216502-45216550)
chr8 (20-84)||(8170896-8170960)
chr8 (25-84)||(37669345-37669403)
chr8 (20-70)||(28737776-28737826)
chr8 (23-84)||(4246705-4246765)
chr8 (156-189)||(27886258-27886291)
chr8 (156-189)||(27944916-27944949)
chr8 (23-84)||(32638496-32638556)
chr8 (23-84)||(34900651-34900711)
chr8 (156-189)||(37372327-37372360)
chr8 (27-72)||(38388943-38388988)
chr8 (23-84)||(43770986-43771046)
chr8 (20-84)||(29355882-29355946)
chr8 (16-84)||(41098753-41098821)
chr8 (25-84)||(42949446-42949505)
chr8 (83-117)||(8170981-8171015)
chr8 (136-178)||(27109111-27109153)
chr8 (156-190)||(30804762-30804796)
chr8 (158-191)||(2872929-2872962)
chr8 (23-84)||(22201100-22201160)
chr8 (23-84)||(25022531-25022592)
chr8 (156-189)||(29355691-29355724)
chr8 (158-191)||(32759439-32759472)
chr8 (158-191)||(32877503-32877536)
chr8 (156-184)||(23265722-23265750)
chr8 (17-84)||(32425178-32425248)
chr8 (83-115)||(40412754-40412786)
[»] chr3 (75 HSPs)
chr3 (17-181)||(42229809-42229973)
chr3 (11-239)||(22289524-22289753)
chr3 (16-189)||(29915929-29916102)
chr3 (16-189)||(29965082-29965255)
chr3 (11-239)||(19349407-19349632)
chr3 (52-234)||(41741916-41742099)
chr3 (11-236)||(45347386-45347610)
chr3 (64-239)||(13748304-13748479)
chr3 (83-239)||(30787436-30787594)
chr3 (83-239)||(25700846-25701004)
chr3 (11-197)||(2122838-2123024)
chr3 (83-239)||(47642092-47642249)
chr3 (17-239)||(28968596-28968842)
chr3 (82-234)||(21157603-21157756)
chr3 (83-239)||(7899593-7899751)
chr3 (83-239)||(55268891-55269048)
chr3 (85-239)||(19421502-19421657)
chr3 (83-198)||(38888961-38889076)
chr3 (83-234)||(19878977-19879130)
chr3 (83-191)||(45057176-45057284)
chr3 (86-198)||(20510034-20510146)
chr3 (11-105)||(39664636-39664730)
chr3 (83-239)||(6134257-6134414)
chr3 (83-195)||(13353070-13353182)
chr3 (98-198)||(39664084-39664183)
chr3 (17-84)||(35390127-35390194)
chr3 (15-84)||(52684591-52684660)
chr3 (17-84)||(22311107-22311174)
chr3 (19-84)||(30787350-30787415)
chr3 (83-163)||(983349-983429)
chr3 (20-84)||(20509946-20510010)
chr3 (15-84)||(21006148-21006217)
chr3 (19-72)||(52121551-52121604)
chr3 (20-84)||(13352985-13353049)
chr3 (16-72)||(48333216-48333272)
chr3 (16-72)||(48334159-48334215)
chr3 (17-76)||(47642278-47642337)
chr3 (15-84)||(2567054-2567123)
chr3 (23-84)||(7328002-7328062)
chr3 (23-84)||(22610557-22610617)
chr3 (20-65)||(25701046-25701091)
chr3 (23-84)||(25936359-25936419)
chr3 (23-84)||(45532343-45532403)
chr3 (20-72)||(19878892-19878944)
chr3 (25-84)||(19421680-19421739)
chr3 (17-84)||(28882353-28882420)
chr3 (17-84)||(50287020-50287087)
chr3 (23-84)||(37996571-37996631)
chr3 (23-72)||(52505104-52505152)
chr3 (24-114)||(28548256-28548348)
chr3 (20-72)||(45057091-45057143)
chr3 (25-84)||(10224442-10224500)
chr3 (16-70)||(7899505-7899559)
chr3 (156-189)||(3983765-3983798)
chr3 (156-189)||(19421484-19421517)
chr3 (156-189)||(55269033-55269066)
chr3 (19-55)||(47750722-47750758)
chr3 (82-177)||(212655-212750)
chr3 (158-189)||(983262-983293)
chr3 (156-191)||(28968576-28968611)
chr3 (83-117)||(2567144-2567178)
chr3 (17-47)||(25322304-25322334)
chr3 (23-89)||(28705513-28705578)
chr3 (158-191)||(1679717-1679750)
chr3 (156-189)||(2122775-2122808)
chr3 (156-189)||(6134399-6134432)
chr3 (156-189)||(22289738-22289771)
chr3 (158-191)||(33240016-33240049)
chr3 (158-191)||(35389816-35389849)
chr3 (158-191)||(40497396-40497429)
chr3 (150-191)||(42229740-42229781)
chr3 (23-84)||(48123602-48123662)
chr3 (207-239)||(3983783-3983815)
chr3 (157-185)||(5271541-5271569)
chr3 (156-192)||(52684266-52684302)
[»] chr1 (66 HSPs)
chr1 (11-239)||(9781728-9781957)
chr1 (20-239)||(34096365-34096584)
chr1 (20-198)||(29861925-29862103)
chr1 (11-198)||(9528647-9528833)
chr1 (11-239)||(29168033-29168262)
chr1 (20-181)||(10822539-10822700)
chr1 (11-239)||(10763745-10763968)
chr1 (82-239)||(38218469-38218627)
chr1 (83-236)||(41675865-41676018)
chr1 (83-234)||(24851565-24851713)
chr1 (83-198)||(24589999-24590114)
chr1 (83-189)||(2472798-2472904)
chr1 (83-198)||(33039740-33039853)
chr1 (20-103)||(34432227-34432310)
chr1 (83-175)||(36551535-36551627)
chr1 (20-84)||(43190021-43190085)
chr1 (17-84)||(13012663-13012730)
chr1 (125-198)||(3708196-3708269)
chr1 (16-84)||(36551648-36551716)
chr1 (20-84)||(47654928-47654992)
chr1 (20-100)||(14167291-14167375)
chr1 (83-198)||(47654792-47654907)
chr1 (117-239)||(48715134-48715257)
chr1 (20-80)||(14334539-14334599)
chr1 (20-84)||(24851734-24851798)
chr1 (20-84)||(31653092-31653156)
chr1 (16-72)||(38218657-38218713)
chr1 (20-89)||(24589913-24589982)
chr1 (23-84)||(25257382-25257442)
chr1 (23-84)||(28658684-28658744)
chr1 (23-84)||(28948489-28948549)
chr1 (16-84)||(32380866-32380934)
chr1 (23-84)||(5984952-5985012)
chr1 (23-84)||(30324485-30324545)
chr1 (23-84)||(36363336-36363396)
chr1 (23-84)||(36367460-36367520)
chr1 (89-181)||(32380962-32381042)
chr1 (23-84)||(6916144-6916204)
chr1 (23-84)||(37104416-37104476)
chr1 (23-84)||(38331215-38331275)
chr1 (17-66)||(41675777-41675826)
chr1 (207-239)||(2364763-2364795)
chr1 (207-239)||(14167170-14167202)
chr1 (17-53)||(15417689-15417725)
chr1 (156-191)||(48715242-48715277)
chr1 (42-84)||(3427622-3427664)
chr1 (23-89)||(8132943-8133008)
chr1 (20-62)||(37922478-37922520)
chr1 (158-191)||(1043293-1043326)
chr1 (158-191)||(13013011-13013044)
chr1 (158-191)||(20409573-20409606)
chr1 (156-189)||(29168015-29168048)
chr1 (158-191)||(30323781-30323814)
chr1 (158-191)||(31653421-31653454)
chr1 (156-189)||(32381076-32381109)
chr1 (89-130)||(34432325-34432366)
chr1 (156-189)||(34432400-34432433)
chr1 (20-84)||(37346631-37346696)
chr1 (158-191)||(43189721-43189754)
chr1 (23-72)||(52894983-52895031)
chr1 (158-190)||(8132250-8132282)
chr1 (207-239)||(10822489-10822521)
chr1 (207-239)||(12158797-12158829)
chr1 (160-192)||(25256681-25256713)
chr1 (207-239)||(32381059-32381091)
chr1 (207-239)||(34432383-34432415)
[»] scaffold0005 (2 HSPs)
scaffold0005 (25-181)||(202571-202725)
scaffold0005 (27-84)||(43890-43946)
[»] scaffold0112 (1 HSPs)
scaffold0112 (25-84)||(41367-41425)
[»] scaffold0285 (2 HSPs)
scaffold0285 (136-234)||(13341-13439)
scaffold0285 (16-84)||(13642-13709)
[»] scaffold0250 (2 HSPs)
scaffold0250 (20-84)||(5908-5972)
scaffold0250 (158-191)||(5578-5611)
[»] scaffold0640 (1 HSPs)
scaffold0640 (158-191)||(8111-8144)
[»] scaffold0177 (1 HSPs)
scaffold0177 (158-191)||(25560-25593)
[»] scaffold0240 (1 HSPs)
scaffold0240 (159-191)||(10666-10698)


Alignment Details
Target: chr5 (Bit Score: 166; Significance: 6e-89; HSPs: 60)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 166; E-Value: 6e-89
Query Start/End: Original strand, 11 - 239
Target Start/End: Complemental strand, 26716588 - 26716359
Alignment:
Q  11 cataggtgttatactatatccaaaaggaacattgttagtgttatattatatcgatccaaaaaggaagcactatactcaagagttaagttattttaattaa 110  Q
    ||||||||||||||||||||||||| |||||||||||||| |||| |||||||||||||||| ||||||||||||||||||||||||||||||||| |||    
T  26716588 cataggtgttatactatatccaaaatgaacattgttagtgctatactatatcgatccaaaaaagaagcactatactcaagagttaagttattttaactaa 26716489  T
Q  111 cattaattgggaagtattggggcagatattggtgcatgataattatcggatactctcctgatacgtatcgggaagtatcggataatta-nnnnnnnnaaa 209  Q
    ||||||||||||||||||| ||||| |||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||         |||    
T  26716488 cattaattgggaagtattgaggcaggtattggtgcaggataattatcggatactctcctgatacgtatcgggaagtatcggataattattttttaaaaaa 26716389  T
Q  210 ataaaatttaatcttcggatactcttctga 239  Q
    ||||||||||||||||||||||||||||||    
T  26716388 ataaaatttaatcttcggatactcttctga 26716359  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 166; E-Value: 6e-89
Query Start/End: Original strand, 11 - 239
Target Start/End: Complemental strand, 26986328 - 26986099
Alignment:
Q  11 cataggtgttatactatatccaaaaggaacattgttagtgttatattatatcgatccaaaaaggaagcactatactcaagagttaagttattttaattaa 110  Q
    ||||||||||||||||||||||||| |||||||||||||| |||| |||||||||||||||| ||||||||||||||||||||||||||||||||| |||    
T  26986328 cataggtgttatactatatccaaaatgaacattgttagtgctatactatatcgatccaaaaaagaagcactatactcaagagttaagttattttaactaa 26986229  T
Q  111 cattaattgggaagtattggggcagatattggtgcatgataattatcggatactctcctgatacgtatcgggaagtatcggataatta-nnnnnnnnaaa 209  Q
    ||||||||||||||||||| ||||| |||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||         |||    
T  26986228 cattaattgggaagtattgaggcaggtattggtgcaggataattatcggatactctcctgatacgtatcgggaagtatcggataattattttttaaaaaa 26986129  T
Q  210 ataaaatttaatcttcggatactcttctga 239  Q
    ||||||||||||||||||||||||||||||    
T  26986128 ataaaatttaatcttcggatactcttctga 26986099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 140; E-Value: 2e-73
Query Start/End: Original strand, 23 - 198
Target Start/End: Complemental strand, 25749909 - 25749734
Alignment:
Q  23 actatatccaaaaggaacattgttagtgttatattatatcgatccaaaaaggaagcactatactcaagagttaagttattttaattaacattaattggga 122  Q
    ||||||||||||| |||||||||||||| ||||||| ||||||||||||| |||||||||||||||| ||||||||||||||||||||||||||||||||    
T  25749909 actatatccaaaatgaacattgttagtgctatattacatcgatccaaaaaagaagcactatactcaaaagttaagttattttaattaacattaattggga 25749810  T
Q  123 agtattggggcagatattggtgcatgataattatcggatactctcctgatacgtatcgggaagtatcggataatta 198  Q
    ||||||||||||| |||||||||| |||||||||||||||||||||||||||||||||| ||||||| ||||||||    
T  25749809 agtattggggcaggtattggtgcaggataattatcggatactctcctgatacgtatcggaaagtatcagataatta 25749734  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 138; E-Value: 3e-72
Query Start/End: Original strand, 11 - 239
Target Start/End: Complemental strand, 27938474 - 27938245
Alignment:
Q  11 cataggtgttatactatatccaaaaggaacattgttagtgttatattatatcgatccaaaaaggaagcactatactcaagagttaagttattttaattaa 110  Q
    |||| ||| |||||||||||||||||||||| |||||||| || | |||||||||||||||| ||||||||||||| |||||||||||||||||||||||    
T  27938474 catacgtgctatactatatccaaaaggaacactgttagtgctacactatatcgatccaaaaaagaagcactatacttaagagttaagttattttaattaa 27938375  T
Q  111 cattaattgggaagtattggggcagatattggtgcatgataattatcggatactctcctgatacgtatcgggaagtatcggataatta-nnnnnnnnaaa 209  Q
     |||||||| |||||||| ||| ||||||||||| | ||||||||||||||||||||||||||||||| |||||||||||||||||||         |||    
T  27938374 tattaattgagaagtattagggtagatattggtgtaggataattatcggatactctcctgatacgtattgggaagtatcggataattattttttaaaaaa 27938275  T
Q  210 ataaaatttaatcttcggatactcttctga 239  Q
    ||||||||||||||||||||||||||||||    
T  27938274 ataaaatttaatcttcggatactcttctga 27938245  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 136; E-Value: 5e-71
Query Start/End: Original strand, 11 - 239
Target Start/End: Original strand, 3934590 - 3934820
Alignment:
Q  11 cataggtgttatactatatccaaaaggaacattgttagtgttatattatatcgatccaaaaaggaagcactatactcaagagttaagttattttaattaa 110  Q
    |||| ||||||||||||||||||||| ||||||||||||||||||||||||||||||||||| |||||| ||||||||||||||||||||||||| ||||    
T  3934590 cataagtgttatactatatccaaaagaaacattgttagtgttatattatatcgatccaaaaaagaagcattatactcaagagttaagttattttagttaa 3934689  T
Q  111 cattaattgggaagtattggggcagatattggtgcatgataattatcggatactctcctgatacgtatcgggaagtatcggataatta--nnnnnnnnaa 208  Q
    ||||||||||||||||||  ||||| ||| | |||| |||||||||||||||||||| ||||||||||||| |||||| |||||||||          ||    
T  3934690 cattaattgggaagtatttaggcaggtatcgatgcaggataattatcggatactctcatgatacgtatcggaaagtattggataattattatttttaaaa 3934789  T
Q  209 aataaaatttaatcttcggatactcttctga 239  Q
    |||||||||||||||||||||||||| ||||    
T  3934790 aataaaatttaatcttcggatactctcctga 3934820  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 129; E-Value: 7e-67
Query Start/End: Original strand, 20 - 235
Target Start/End: Original strand, 43357571 - 43357787
Alignment:
Q  20 tatactatatccaaaaggaacattgttagtgttatattatatcgatccaaaaaggaagcactatactcaagagttaagttattttaattaacattaattg 119  Q
    ||||||||||||||||| ||||||||||||| |||| ||||||||| |||||| |||||||||||||||||||||||||||||||| ||||| |||||||    
T  43357571 tatactatatccaaaagaaacattgttagtgctatactatatcgattcaaaaaagaagcactatactcaagagttaagttattttatttaacgttaattg 43357670  T
Q  120 ggaagtattggggcagatattggtgcatgataattatcggatactctcctgatacgtatcgggaagtatcggataatta-nnnnnnnnaaaataaaattt 218  Q
    |||| ||||| ||||| ||| |||||| |||||||||| |||||| |||||||||||||||||||||||||||||||||         ||||||||||||    
T  43357671 ggaattattgaggcaggtataggtgcaggataattatcagatactttcctgatacgtatcgggaagtatcggataattattttttaaaaaaataaaattt 43357770  T
Q  219 aatcttcggatactctt 235  Q
    |||||||||||||||||    
T  43357771 aatcttcggatactctt 43357787  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 128; E-Value: 3e-66
Query Start/End: Original strand, 11 - 239
Target Start/End: Complemental strand, 1795708 - 1795478
Alignment:
Q  11 cataggtgttatactatatccaaaaggaacattgttagtgttatattatatcgatccaaaaaggaagcactatactcaagagttaagttattttaattaa 110  Q
    |||| ||||||||||||||||||||| ||||||||||||| |||| |||||||||||||||| |||||||||||||||||||||||||||||||| ||||    
T  1795708 cataagtgttatactatatccaaaagaaacattgttagtgctatactatatcgatccaaaaaagaagcactatactcaagagttaagttattttatttaa 1795609  T
Q  111 cattaattgggaagtattggggcagatattggtgcatgataattatcggatactctcctgatacgtatcgggaagtatcggataatta--nnnnnnnnaa 208  Q
    | ||| ||||||| |||| || ||| |||  ||||| ||||||||||||||||| | |||||||||||||||||||||||||||||||          ||    
T  1795608 cgttagttgggaattatttggacaggtatatgtgcaggataattatcggatacttttctgatacgtatcgggaagtatcggataattatttttaaaaaaa 1795509  T
Q  209 aataaaatttaatcttcggatactcttctga 239  Q
    |||||||||||||||||||||||||||||||    
T  1795508 aataaaatttaatcttcggatactcttctga 1795478  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 101; E-Value: 4e-50
Query Start/End: Original strand, 19 - 198
Target Start/End: Original strand, 42365917 - 42366097
Alignment:
Q  19 ttatactatatccaaaaggaacattgttagtgttatattatatcgatccaaaaag-gaagcactatactcaagagttaagttattttaattaacattaat 117  Q
    ||||||||||||||||||||| ||| |||||  |||| ||||||||||||||||  |||||| ||||||||| ||||||||||||| | |||||||||||    
T  42365917 ttatactatatccaaaaggaagattcttagttatatactatatcgatccaaaaaaagaagcattatactcaaaagttaagttatttcagttaacattaat 42366016  T
Q  118 tgggaagtattggggcagatattggtgcatgataattatcggatactctcctgatacgtatcgggaagtatcggataatta 198  Q
    |||||||||||  ||||| ||  |||||| ||||||||||||||||||||||||||| ||||||||||||| |||||||||    
T  42366017 tgggaagtatttaggcaggtaacggtgcaggataattatcggatactctcctgatacatatcgggaagtattggataatta 42366097  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 87; E-Value: 8e-42
Query Start/End: Original strand, 82 - 239
Target Start/End: Original strand, 17138128 - 17138286
Alignment:
Q  82 atactcaagagttaagttattttaattaacattaattgggaagtattggggcagatattggtgcatgataattatcggatactctcctgatacgtatcgg 181  Q
    |||||||||||||||||||||||| ||||||||||||||||| |||  ||||||||||  ||||| ||||||||||||||||||||||||||||||||||    
T  17138128 atactcaagagttaagttattttagttaacattaattgggaaatatcagggcagatatcagtgcaggataattatcggatactctcctgatacgtatcgg 17138227  T
Q  182 gaagtatcggataatta-nnnnnnnnaaaataaaatttaatcttcggatactcttctga 239  Q
    |||||||| ||||||||         |||||||||||||||||||||||| ||| ||||    
T  17138228 gaagtatcagataattactttttaaaaaaataaaatttaatcttcggatattctcctga 17138286  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 86; E-Value: 3e-41
Query Start/End: Original strand, 82 - 234
Target Start/End: Original strand, 5612316 - 5612469
Alignment:
Q  82 atactcaagagttaagttattttaattaacattaattgggaagtattggggcagatattggtgcatgataattatcggatactctcctgatacgtatcgg 181  Q
    |||||| ||||||||||||||||||||||||||||||||||| ||| ||||||| ||  |||||| |||||||||| ||||||||||||||||||||| |    
T  5612316 atactcgagagttaagttattttaattaacattaattgggaactatcggggcaggtagcggtgcaggataattatcagatactctcctgatacgtatcag 5612415  T
Q  182 gaagtatcggataatta-nnnnnnnnaaaataaaatttaatcttcggatactct 234  Q
    |||||||||||||||||         ||||||||||||||||||||||||||||    
T  5612416 gaagtatcggataattattttttaaaaaaataaaatttaatcttcggatactct 5612469  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 85; E-Value: 1e-40
Query Start/End: Original strand, 11 - 135
Target Start/End: Complemental strand, 14836647 - 14836523
Alignment:
Q  11 cataggtgttatactatatccaaaaggaacattgttagtgttatattatatcgatccaaaaaggaagcactatactcaagagttaagttattttaattaa 110  Q
    |||| ||||||||||||||||||||| ||| ||||||||| |||| |||||||||||||||| |||||||||||||||||||||||||||||||| ||||    
T  14836647 cataagtgttatactatatccaaaagaaactttgttagtgatatactatatcgatccaaaaaagaagcactatactcaagagttaagttattttatttaa 14836548  T
Q  111 cattaattgggaagtattggggcag 135  Q
    |||||||||| || |||||| ||||    
T  14836547 cattaattggaaattattggtgcag 14836523  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 84; E-Value: 5e-40
Query Start/End: Original strand, 45 - 188
Target Start/End: Original strand, 35746158 - 35746300
Alignment:
Q  45 ttagtgttatattatatcgatccaaaaaggaagcactatactcaagagttaagttattttaattaacattaattgggaagtattggggcagatattggtg 144  Q
    ||||||||||| |||||||||| ||||| ||| |||||||||||||||||||||||||||| ||||||||||||||||||||||||  ||  |||  |||    
T  35746158 ttagtgttatactatatcgatctaaaaaagaaacactatactcaagagttaagttattttacttaacattaattgggaagtattgga-catgtatcagtg 35746256  T
Q  145 catgataattatcggatactctcctgatacgtatcgggaagtat 188  Q
    || |||||||||| ||||||||||||||||||||||| ||||||    
T  35746257 caggataattatcagatactctcctgatacgtatcggaaagtat 35746300  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 20 - 239
Target Start/End: Complemental strand, 7629352 - 7629145
Alignment:
Q  20 tatactatatccaaaaggaacattgttagtgttatattatatcgatccaaaaaggaagcactatactcaagagttaagttattttaattaacattaattg 119  Q
    |||||||||||||||||  |||||||||||| |||| |||||||||||||||| |||||| | ||||||||||||||| ||||||| |||||||||||||    
T  7629352 tatactatatccaaaagatacattgttagtgctatactatatcgatccaaaaaagaagcattgtactcaagagttaagctattttagttaacattaattg 7629253  T
Q  120 ggaagtattggggcagatattggtgcatgataattatcggatactctcctgatacgtatcgggaagtatcggataattannnnnnnnaaaataaaattta 219  Q
     ||||||||||||||| ||| ||||||            |||||||| |||||| ||||||||||||||| |||||||         |||||||||||||    
T  7629252 agaagtattggggcaggtatcggtgca------------gatactcttctgatatgtatcgggaagtatcagataattttttttttcaaaataaaattta 7629165  T
Q  220 atcttcggatactcttctga 239  Q
    |||||| |||||||| ||||    
T  7629164 atcttcagatactctcctga 7629145  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 77; E-Value: 8e-36
Query Start/End: Original strand, 83 - 234
Target Start/End: Complemental strand, 26691859 - 26691707
Alignment:
Q  83 tactcaagagttaagttattttaattaacattaattgggaagtattggggcagatattggtgcatgataattatcggatactctcctgatacgtatcggg 182  Q
    ||||||| | ||||||||||||| ||||||||||||||||||||| || ||||||||   |||| ||||||||||| ||||| |||||||||||||||||    
T  26691859 tactcaaaacttaagttattttagttaacattaattgggaagtatcggagcagatatcaatgcaggataattatcgcatactatcctgatacgtatcggg 26691760  T
Q  183 aagtatcggataatta-nnnnnnnnaaaataaaatttaatcttcggatactct 234  Q
    ||||||||||||||||         ||||||||||||||||||||||||||||    
T  26691759 aagtatcggataattatttttaaaaaaaataaaatttaatcttcggatactct 26691707  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 77; E-Value: 8e-36
Query Start/End: Original strand, 83 - 234
Target Start/End: Complemental strand, 26961591 - 26961439
Alignment:
Q  83 tactcaagagttaagttattttaattaacattaattgggaagtattggggcagatattggtgcatgataattatcggatactctcctgatacgtatcggg 182  Q
    ||||||| | ||||||||||||| ||||||||||||||||||||| || ||||||||   |||| ||||||||||| ||||| |||||||||||||||||    
T  26961591 tactcaaaacttaagttattttagttaacattaattgggaagtatcggagcagatatcaatgcaggataattatcgcatactatcctgatacgtatcggg 26961492  T
Q  183 aagtatcggataatta-nnnnnnnnaaaataaaatttaatcttcggatactct 234  Q
    ||||||||||||||||         ||||||||||||||||||||||||||||    
T  26961491 aagtatcggataattatttttaaaaaaaataaaatttaatcttcggatactct 26961439  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 69; E-Value: 5e-31
Query Start/End: Original strand, 83 - 239
Target Start/End: Original strand, 30284480 - 30284639
Alignment:
Q  83 tactcaagagttaagttattttaattaacattaattgggaagtattggggcagatattggtgcatgataattatcggatactctcctgatac--gtatcg 180  Q
    |||||| |||||||||||||||| ||||||||||||||||| |||  |||||||||| ||||||  |||||||| | ||||||||||| |||  ||||||    
T  30284480 tactcaggagttaagttattttagttaacattaattgggaaatatcagggcagatatcggtgcagaataattattgaatactctcctggtacgtgtatcg 30284579  T
Q  181 ggaagtatcggataatta-nnnnnnnnaaaataaaatttaatcttcggatactcttctga 239  Q
    ||||||||||||||||||         |||||||||||||||||||||||||||| ||||    
T  30284580 ggaagtatcggataattatttttttttaaaataaaatttaatcttcggatactctcctga 30284639  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 83 - 198
Target Start/End: Original strand, 18001841 - 18001955
Alignment:
Q  83 tactcaagagttaagttattttaattaacattaattgggaagtattggggcagatattggtgcatgataattatcggatactctcctgatacgtatcggg 182  Q
    ||||||| | ||||||||||||| ||||||||||||| ||| |||||| |||| ||| ||||||||||||||||||||||||||| |||||||||||||     
T  18001841 tactcaataattaagttattttagttaacattaattgagaa-tattggagcaggtatcggtgcatgataattatcggatactctcttgatacgtatcgga 18001939  T
Q  183 aagtatcggataatta 198  Q
    ||||||| ||||||||    
T  18001940 aagtatcagataatta 18001955  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 67; E-Value: 7e-30
Query Start/End: Original strand, 88 - 198
Target Start/End: Complemental strand, 11694440 - 11694331
Alignment:
Q  88 aagagttaagttattttaattaacattaattgggaagtattggggcagatattggtgcatgataattatcggatactctcctgatacgtatcgggaagta 187  Q
    |||||||||||||||||| ||||||||||||||||| ||||||||||| ||  |||||| |||||||||| |||| |||| |||||||||||||||||||    
T  11694440 aagagttaagttatttta-ttaacattaattgggaactattggggcaggtagcggtgcaggataattatcagatattctcttgatacgtatcgggaagta 11694342  T
Q  188 tcggataatta 198  Q
    || ||||||||    
T  11694341 tcagataatta 11694331  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 83 - 189
Target Start/End: Complemental strand, 41233549 - 41233447
Alignment:
Q  83 tactcaagagttaagttattttaattaacattaattgggaagtattggggcagatattggtgcatgataattatcggatactctcctgatacgtatcggg 182  Q
    ||||||| ||||||||||||||| ||||||||||||||||| ||||||||||| ||| |    |||||||||||| ||||||||||||||||||||||||    
T  41233549 tactcaacagttaagttattttagttaacattaattgggaaatattggggcaggtatcg----atgataattatcagatactctcctgatacgtatcggg 41233454  T
Q  183 aagtatc 189  Q
    |||||||    
T  41233453 aagtatc 41233447  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 17 - 179
Target Start/End: Complemental strand, 22738168 - 22737985
Alignment:
Q  17 tgttatactatatccaaaaggaacattgttagtgttatattatatcgatccaaaaaggaagcactata---------------------ctcaagagtta 95  Q
    ||||||||||||||||||||||||||||||||||||||| |||||||||||||||| |||||||||||                     |||||||||||    
T  22738168 tgttatactatatccaaaaggaacattgttagtgttatactatatcgatccaaaaaagaagcactatatccaaaaagaacacatcagtgctcaagagtta 22738069  T
Q  96 agttattttaattaacattaattgggaagtattggggcagatattggtgcatgataattatcggatactctcctgatacgtatc 179  Q
    | |||||||| ||||||||||||| ||||||| | ||||| |||  ||||| |||||||||| |||||||| ||||||||||||    
T  22738068 aattattttagttaacattaattgagaagtatcgaggcaggtatcagtgcaggataattatcagatactcttctgatacgtatc 22737985  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 83 - 189
Target Start/End: Complemental strand, 27085592 - 27085486
Alignment:
Q  83 tactcaagagttaagttattttaattaacattaattgggaagtattggggcagatattggtgcatgataattatcggatactctcctgatacgtatcggg 182  Q
    ||||||||||||||||||||||| |||||||||||||| || ||| |||| || ||| ||| || |||||||||| |||||||| ||||||||||| |||    
T  27085592 tactcaagagttaagttattttagttaacattaattggcaaatatcgggggagctatcggttcaggataattatcagatactcttctgatacgtattggg 27085493  T
Q  183 aagtatc 189  Q
    |||||||    
T  27085492 aagtatc 27085486  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 17 - 84
Target Start/End: Complemental strand, 26691948 - 26691881
Alignment:
Q  17 tgttatactatatccaaaaggaacattgttagtgttatattatatcgatccaaaaaggaagcactata 84  Q
    ||||||||||||||||||||||||||||||||||||||| | |||||||||||||| |||||||||||    
T  26691948 tgttatactatatccaaaaggaacattgttagtgttatactctatcgatccaaaaaagaagcactata 26691881  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 17 - 84
Target Start/End: Complemental strand, 26961680 - 26961613
Alignment:
Q  17 tgttatactatatccaaaaggaacattgttagtgttatattatatcgatccaaaaaggaagcactata 84  Q
    ||||||||||||||||||||||||||||||||||||||| | |||||||||||||| |||||||||||    
T  26961680 tgttatactatatccaaaaggaacattgttagtgttatactctatcgatccaaaaaagaagcactata 26961613  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 20 - 81
Target Start/End: Complemental strand, 3701392 - 3701331
Alignment:
Q  20 tatactatatccaaaaggaacattgttagtgttatattatatcgatccaaaaaggaagcact 81  Q
    |||||||||||||||||||||||||||||||||||| |||||||||||||||| ||||||||    
T  3701392 tatactatatccaaaaggaacattgttagtgttatactatatcgatccaaaaaagaagcact 3701331  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 16 - 84
Target Start/End: Complemental strand, 11907623 - 11907555
Alignment:
Q  16 gtgttatactatatccaaaaggaacattgttagtgttatattatatcgatccaaaaaggaagcactata 84  Q
    |||||||||||||||||||||| |||||||| |||||||| |||||||||||||||| |||||||||||    
T  11907623 gtgttatactatatccaaaaggtacattgttggtgttataatatatcgatccaaaaaagaagcactata 11907555  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 20 - 84
Target Start/End: Complemental strand, 1921089 - 1921024
Alignment:
Q  20 tatactatatccaaaaggaacattgttagtgtt-atattatatcgatccaaaaaggaagcactata 84  Q
    ||||||||||||||||||| ||||||||||||| |||||||||||||||||||| |||||||||||    
T  1921089 tatactatatccaaaaggatcattgttagtgttaatattatatcgatccaaaaaagaagcactata 1921024  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 20 - 84
Target Start/End: Complemental strand, 27085677 - 27085613
Alignment:
Q  20 tatactatatccaaaaggaacattgttagtgttatattatatcgatccaaaaaggaagcactata 84  Q
    |||||||||| ||||| |||||||||||||| ||||||||||||||||||||| |||||||||||    
T  27085677 tatactatattcaaaatgaacattgttagtgctatattatatcgatccaaaaaagaagcactata 27085613  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 83 - 179
Target Start/End: Complemental strand, 5722220 - 5722124
Alignment:
Q  83 tactcaagagttaagttattttaattaacattaattgggaagtattggggcagatattggtgcatgataattatcggatactctcctgatacgtatc 179  Q
    ||||||||||||||||| ||||| | ||||||||||||||| ||| ||||||  |||| ||| | ||||||||||| ||||||| |||||| |||||    
T  5722220 tactcaagagttaagtttttttagtcaacattaattgggaaatatcggggcaagtatttgtgtaggataattatcgaatactcttctgataagtatc 5722124  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 20 - 84
Target Start/End: Complemental strand, 10657286 - 10657222
Alignment:
Q  20 tatactatatccaaaaggaacattgttagtgttatattatatcgatccaaaaaggaagcactata 84  Q
    ||||||||||||||| ||||||||||||||| |||| |||||||||||||||| |||||| ||||    
T  10657286 tatactatatccaaacggaacattgttagtgctatactatatcgatccaaaaaagaagcattata 10657222  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 20 - 84
Target Start/End: Complemental strand, 15066519 - 15066455
Alignment:
Q  20 tatactatatccaaaaggaacattgttagtgttatattatatcgatccaaaaaggaagcactata 84  Q
    |||||||||||| ||||||||||||||||||||||| ||||| |||||||||| |||||| ||||    
T  15066519 tatactatatccgaaaggaacattgttagtgttatactatattgatccaaaaaagaagcattata 15066455  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 20 - 84
Target Start/End: Original strand, 17138044 - 17138108
Alignment:
Q  20 tatactatatccaaaaggaacattgttagtgttatattatatcgatccaaaaaggaagcactata 84  Q
    |||| ||||| |||||||||||||||||||| ||||||||||| ||||||||| |||||||||||    
T  17138044 tatattatatgcaaaaggaacattgttagtgctatattatatcaatccaaaaaagaagcactata 17138108  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 20 - 72
Target Start/End: Original strand, 30284397 - 30284449
Alignment:
Q  20 tatactatatccaaaaggaacattgttagtgttatattatatcgatccaaaaa 72  Q
    |||||||||||||||| ||||||||||||||||||| ||||||||||||||||    
T  30284397 tatactatatccaaaatgaacattgttagtgttatactatatcgatccaaaaa 30284449  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 23 - 84
Target Start/End: Original strand, 39690011 - 39690071
Alignment:
Q  23 actatatccaaaaggaacattgttagtgttatattatatcgatccaaaaaggaagcactata 84  Q
    |||||||||||||||||| |||||||||||||| |||||||||||||||| ||| |||||||    
T  39690011 actatatccaaaaggaac-ttgttagtgttatactatatcgatccaaaaaagaatcactata 39690071  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 15 - 84
Target Start/End: Original strand, 6242815 - 6242886
Alignment:
Q  15 ggtgttatactatatccaaaaggaacattgttagtgttata--ttatatcgatccaaaaaggaagcactata 84  Q
    |||| |||||||||||||||| |||||||||||||||||||   |||||||||| ||||| |||||||||||    
T  6242815 ggtgctatactatatccaaaaagaacattgttagtgttatactatatatcgatctaaaaaagaagcactata 6242886  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 20 - 72
Target Start/End: Complemental strand, 21251790 - 21251738
Alignment:
Q  20 tatactatatccaaaaggaacattgttagtgttatattatatcgatccaaaaa 72  Q
    |||||||||||||||||||||||||||| || |||| ||||||||||||||||    
T  21251790 tatactatatccaaaaggaacattgttaatgctatactatatcgatccaaaaa 21251738  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 20 - 84
Target Start/End: Original strand, 30777200 - 30777264
Alignment:
Q  20 tatactatatccaaaaggaacattgttagtgttatattatatcgatccaaaaaggaagcactata 84  Q
    |||||||||| ||||| ||||||||||||||||||| |||||||||| |||||  ||||||||||    
T  30777200 tatactatattcaaaaagaacattgttagtgttatactatatcgatctaaaaaataagcactata 30777264  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 25 - 84
Target Start/End: Original strand, 1639072 - 1639130
Alignment:
Q  25 tatatccaaaaggaacattgttagtgttatattatatcgatccaaaaaggaagcactata 84  Q
    ||||||||||| |||| ||||||||| ||||||||||||||||||||| |||||||||||    
T  1639072 tatatccaaaatgaac-ttgttagtgctatattatatcgatccaaaaaagaagcactata 1639130  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 20 - 84
Target Start/End: Complemental strand, 5722305 - 5722241
Alignment:
Q  20 tatactatatccaaaaggaacattgttagtgttatattatatcgatccaaaaaggaagcactata 84  Q
    |||| |||||||||||  |||||||||||||||||  ||||||||| |||||| |||||||||||    
T  5722305 tatattatatccaaaataaacattgttagtgttatcctatatcgattcaaaaaagaagcactata 5722241  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 25 - 84
Target Start/End: Original strand, 26794284 - 26794342
Alignment:
Q  25 tatatccaaaaggaacattgttagtgttatattatatcgatccaaaaaggaagcactata 84  Q
    |||||||||||||||| |||||||||||||| || ||||||||||||| ||| |||||||    
T  26794284 tatatccaaaaggaac-ttgttagtgttatactaaatcgatccaaaaaagaatcactata 26794342  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 23 - 84
Target Start/End: Complemental strand, 9793134 - 9793074
Alignment:
Q  23 actatatccaaaaggaacattgttagtgttatattatatcgatccaaaaaggaagcactata 84  Q
    ||||||||||||| |||| ||||||||| |||| |||||||||||||||| ||| |||||||    
T  9793134 actatatccaaaatgaac-ttgttagtgatatactatatcgatccaaaaaagaatcactata 9793074  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #41
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 156 - 189
Target Start/End: Original strand, 30284624 - 30284657
Alignment:
Q  156 tcggatactctcctgatacgtatcgggaagtatc 189  Q
    ||||||||||||||||||||||||||||||||||    
T  30284624 tcggatactctcctgatacgtatcgggaagtatc 30284657  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #42
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 156 - 189
Target Start/End: Complemental strand, 34032470 - 34032437
Alignment:
Q  156 tcggatactctcctgatacgtatcgggaagtatc 189  Q
    ||||||||||||||||||||||||||||||||||    
T  34032470 tcggatactctcctgatacgtatcgggaagtatc 34032437  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #43
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 156 - 192
Target Start/End: Complemental strand, 11906319 - 11906283
Alignment:
Q  156 tcggatactctcctgatacgtatcgggaagtatcgga 192  Q
    ||||||||||||| |||||||||||||||||||||||    
T  11906319 tcggatactctccggatacgtatcgggaagtatcgga 11906283  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #44
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 207 - 239
Target Start/End: Complemental strand, 19321491 - 19321459
Alignment:
Q  207 aaaataaaatttaatcttcggatactcttctga 239  Q
    |||||||||||||||||||||||||||||||||    
T  19321491 aaaataaaatttaatcttcggatactcttctga 19321459  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #45
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 28 - 72
Target Start/End: Complemental strand, 33830593 - 33830550
Alignment:
Q  28 atccaaaaggaacattgttagtgttatattatatcgatccaaaaa 72  Q
    ||||||||||||| |||||||||||||| ||||||||||||||||    
T  33830593 atccaaaaggaac-ttgttagtgttatactatatcgatccaaaaa 33830550  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #46
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 159 - 189
Target Start/End: Complemental strand, 7629157 - 7629127
Alignment:
Q  159 gatactctcctgatacgtatcgggaagtatc 189  Q
    |||||||||||||||||||||||||||||||    
T  7629157 gatactctcctgatacgtatcgggaagtatc 7629127  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #47
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 156 - 189
Target Start/End: Original strand, 3934805 - 3934838
Alignment:
Q  156 tcggatactctcctgatacgtatcgggaagtatc 189  Q
    |||||||||||||||||||||||||| |||||||    
T  3934805 tcggatactctcctgatacgtatcggtaagtatc 3934838  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #48
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 20 - 65
Target Start/End: Original strand, 5985755 - 5985800
Alignment:
Q  20 tatactatatccaaaaggaacattgttagtgttatattatatcgat 65  Q
    |||||| |||||||||||||||||| ||||| |||| |||||||||    
T  5985755 tatactttatccaaaaggaacattgctagtgctatactatatcgat 5985800  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #49
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 156 - 189
Target Start/End: Original strand, 17138271 - 17138304
Alignment:
Q  156 tcggatactctcctgatacgtatcgggaagtatc 189  Q
    ||||||| ||||||||||||||||||||||||||    
T  17138271 tcggatattctcctgatacgtatcgggaagtatc 17138304  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #50
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 156 - 189
Target Start/End: Complemental strand, 21251566 - 21251533
Alignment:
Q  156 tcggatactctcctgatacgtatcgggaagtatc 189  Q
    |||||||||||||||||||||||||| |||||||    
T  21251566 tcggatactctcctgatacgtatcggaaagtatc 21251533  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #51
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 156 - 189
Target Start/End: Complemental strand, 26691717 - 26691684
Alignment:
Q  156 tcggatactctcctgatacgtatcgggaagtatc 189  Q
    |||||||||||| |||||||||||||||||||||    
T  26691717 tcggatactctcttgatacgtatcgggaagtatc 26691684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #52
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 156 - 189
Target Start/End: Complemental strand, 26716374 - 26716341
Alignment:
Q  156 tcggatactctcctgatacgtatcgggaagtatc 189  Q
    ||||||||||| ||||||||||||||||||||||    
T  26716374 tcggatactcttctgatacgtatcgggaagtatc 26716341  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #53
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 156 - 189
Target Start/End: Complemental strand, 26961449 - 26961416
Alignment:
Q  156 tcggatactctcctgatacgtatcgggaagtatc 189  Q
    |||||||||||| |||||||||||||||||||||    
T  26961449 tcggatactctcttgatacgtatcgggaagtatc 26961416  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #54
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 156 - 189
Target Start/End: Complemental strand, 26986114 - 26986081
Alignment:
Q  156 tcggatactctcctgatacgtatcgggaagtatc 189  Q
    ||||||||||| ||||||||||||||||||||||    
T  26986114 tcggatactcttctgatacgtatcgggaagtatc 26986081  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #55
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 158 - 191
Target Start/End: Original strand, 30777541 - 30777574
Alignment:
Q  158 ggatactctcctgatacgtatcgggaagtatcgg 191  Q
    ||||||||||| ||||||||||||||||||||||    
T  30777541 ggatactctccggatacgtatcgggaagtatcgg 30777574  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #56
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 158 - 191
Target Start/End: Original strand, 32707850 - 32707883
Alignment:
Q  158 ggatactctcctgatacgtatcgggaagtatcgg 191  Q
    ||||||||||| ||||||||||||||||||||||    
T  32707850 ggatactctccggatacgtatcgggaagtatcgg 32707883  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #57
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 158 - 191
Target Start/End: Original strand, 32728728 - 32728761
Alignment:
Q  158 ggatactctcctgatacgtatcgggaagtatcgg 191  Q
    ||||||||||| ||||||||||||||||||||||    
T  32728728 ggatactctccggatacgtatcgggaagtatcgg 32728761  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #58
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 207 - 243
Target Start/End: Complemental strand, 3701316 - 3701280
Alignment:
Q  207 aaaataaaatttaatcttcggatactcttctgaaaca 243  Q
    ||||||||||||||||||| |||||||| ||||||||    
T  3701316 aaaataaaatttaatcttcagatactctcctgaaaca 3701280  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #59
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 25 - 65
Target Start/End: Original strand, 9729431 - 9729471
Alignment:
Q  25 tatatccaaaaggaacattgttagtgttatattatatcgat 65  Q
    ||||||||||||||||||||||| || |||| |||||||||    
T  9729431 tatatccaaaaggaacattgttaatgctatactatatcgat 9729471  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #60
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 17 - 49
Target Start/End: Original strand, 39796753 - 39796785
Alignment:
Q  17 tgttatactatatccaaaaggaacattgttagt 49  Q
    |||||||||||||| ||||||||||||||||||    
T  39796753 tgttatactatatctaaaaggaacattgttagt 39796785  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 155; Significance: 2e-82; HSPs: 53)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 155; E-Value: 2e-82
Query Start/End: Original strand, 20 - 239
Target Start/End: Complemental strand, 4562095 - 4561874
Alignment:
Q  20 tatactatatccaaaaggaacattgttagtgttatattatatcgatccaaaaaggaagcactatactcaagagttaagttattttaattaacattaattg 119  Q
    ||||||||||||||||||||||||||||||| |||| |||||| ||||||||| ||||||||||||||||||||||||||||||||| ||||||||||||    
T  4562095 tatactatatccaaaaggaacattgttagtgatatactatatcaatccaaaaaagaagcactatactcaagagttaagttattttaagtaacattaattg 4561996  T
Q  120 ggaagtattggggcagatattggtgcatgataattatcggatactctcctgatacgtatcgggaagtatcggataatta--nnnnnnnnaaaataaaatt 217  Q
    |||||||||||| ||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||          |||||||||||    
T  4561995 ggaagtattgggacaggtattggtgcatgataattatcggatactctcctgatacgtatcgggaagtatcagataattatttttttaaaaaaataaaatt 4561896  T
Q  218 taatcttcggatactcttctga 239  Q
    ||||||||||||||||||||||    
T  4561895 taatcttcggatactcttctga 4561874  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 152; E-Value: 1e-80
Query Start/End: Original strand, 11 - 239
Target Start/End: Complemental strand, 14824454 - 14824224
Alignment:
Q  11 cataggtgttatactatatccaaaaggaacattgttagtgttatattatatcgatccaaaaaggaagcactatactcaagagttaagttattttaattaa 110  Q
    |||| ||| |||||||||||||||| |||||||||||||| |||| |||||||||||||||| |||||| ||||||||||||||||||||||||||||||    
T  14824454 cataagtgctatactatatccaaaaagaacattgttagtgctatactatatcgatccaaaaaagaagcattatactcaagagttaagttattttaattaa 14824355  T
Q  111 cattaattgggaagtattggggcagatattggtgcatgataattatcggatactctcctgatacgtatcgggaagtatcggataatta--nnnnnnnnaa 208  Q
    |||||||||||||||||||||| || |||||||||| ||||||||||||||||||||||||||||||||||||| |||||||||||||          ||    
T  14824354 cattaattgggaagtattggggaaggtattggtgcaggataattatcggatactctcctgatacgtatcgggaaatatcggataattattttttttttaa 14824255  T
Q  209 aataaaatttaatcttcggatactcttctga 239  Q
    |||||||||||||||||||||||||||||||    
T  14824254 aataaaatttaatcttcggatactcttctga 14824224  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 148; E-Value: 3e-78
Query Start/End: Original strand, 11 - 237
Target Start/End: Complemental strand, 1005827 - 1005600
Alignment:
Q  11 cataggtgttatactatatccaaaaggaacattgttagtgttatattatatcgatccaaaaaggaagcactatactcaagagttaagttattttaattaa 110  Q
    |||| ||| |||||||||||||||||||| ||||||||||||||| |||||||||||||||| ||| |||||||||||||||||||||||||||||||||    
T  1005827 cataagtgctatactatatccaaaaggaatattgttagtgttatactatatcgatccaaaaaagaaacactatactcaagagttaagttattttaattaa 1005728  T
Q  111 cattaattgggaagtattggggcagatattggtgcatgataattatcggatactctcctgatacgtatcgggaagtatcggataattannnnnnnna-aa 209  Q
    |||||||||||||||||||||||||||||||||||| |||||||||| |||||||| |||||||||||| ||||||||| ||||||||        | ||    
T  1005727 cattaattgggaagtattggggcagatattggtgcaggataattatcagatactcttctgatacgtatcaggaagtatcagataattatttaaaaaataa 1005628  T
Q  210 ataaaatttaatcttcggatactcttct 237  Q
    |||||||||||||||| |||||||||||    
T  1005627 ataaaatttaatcttcagatactcttct 1005600  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 142; E-Value: 1e-74
Query Start/End: Original strand, 15 - 239
Target Start/End: Original strand, 8482724 - 8482949
Alignment:
Q  15 ggtgttatactatatccaaaaggaacattgttagtgttatattatatcgatccaaaaaggaagcactatactcaagagttaagttattttaattaacatt 114  Q
    |||| |||||||||||||||||||||||||||| |||||||||||||||||||||||| |||||| ||||||||||||||||||||||||||||||||||    
T  8482724 ggtgctatactatatccaaaaggaacattgttaatgttatattatatcgatccaaaaaagaagcattatactcaagagttaagttattttaattaacatt 8482823  T
Q  115 aattgggaagtattggggcagatattggtgcatgataattatcggatactctcctgatacgtatcgggaagtatcggataatta-nnnnnnnnaaaataa 213  Q
     |||||||||||||| ||||| ||| |||||| |||||||||||||| |||| |||||| |||||| |||||||||||||||||         |||||||    
T  8482824 gattgggaagtattgaggcaggtatcggtgcaggataattatcggatgctcttctgatatgtatcgcgaagtatcggataattattttttaaaaaaataa 8482923  T
Q  214 aatttaatcttcggatactcttctga 239  Q
    ||||||||||||||||||||||||||    
T  8482924 aatttaatcttcggatactcttctga 8482949  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 131; E-Value: 5e-68
Query Start/End: Original strand, 16 - 239
Target Start/End: Complemental strand, 44156908 - 44156683
Alignment:
Q  16 gtgttatactatatccaaaaggaacattgttagtgttatattatatcgatccaaaaaggaagcactatactcaagagttaagttattttaattaacatta 115  Q
    ||||||||||||||||| ||| ||||||||||||  ||||||||||||||||||||| |||||| ||||||||||||||||||||||||| |||||||||    
T  44156908 gtgttatactatatccagaagaaacattgttagttctatattatatcgatccaaaaaagaagcattatactcaagagttaagttattttagttaacatta 44156809  T
Q  116 attgggaagtattggggcagatattggtgcatgataattatcggatactctcctgatacgtatcgggaagtatcggataatta--nnnnnnnnaaaataa 213  Q
    |||||||||||||||| ||| ||| |||||| ||||||||||||||||  |||||||||||||| ||||||||||||||||||          |||||||    
T  44156808 attgggaagtattgggtcaggtatcggtgcaggataattatcggataccatcctgatacgtatcaggaagtatcggataattattttttaaaaaaaataa 44156709  T
Q  214 aatttaatcttcggatactcttctga 239  Q
    ||||||||||||||||||||| ||||    
T  44156708 aatttaatcttcggatactctcctga 44156683  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 116; E-Value: 4e-59
Query Start/End: Original strand, 17 - 239
Target Start/End: Complemental strand, 3564149 - 3563926
Alignment:
Q  17 tgttatactatatccaaaaggaacattgttagtgttatattatatcgatccaaaaaggaagcactatactcaagagttaagttattttaattaacattaa 116  Q
    |||||||||||||||||||| | |||||||| || |||| ||||  |||||||||| ||  |||||||||||||||||||||||||||| ||||||||||    
T  3564149 tgttatactatatccaaaagaagcattgttaatgctatactataatgatccaaaaaagagtcactatactcaagagttaagttattttacttaacattaa 3564050  T
Q  117 ttgggaagtattggggcagatattggtgcatgataattatcggatactctcctgatacgtatcgggaagtatcggataattannnnnnnna-aaataaaa 215  Q
    ||||||||||||| ||||| ||| | |||| ||||||||||||||||||| |||||||||||||||||||||| ||||||||        | ||||||||    
T  3564049 ttgggaagtattgtggcaggtatcgatgcaggataattatcggatactcttctgatacgtatcgggaagtatcagataattattttttaaagaaataaaa 3563950  T
Q  216 tttaatcttcggatactcttctga 239  Q
    ||||||||||||||||||| ||||    
T  3563949 tttaatcttcggatactctcctga 3563926  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 112; E-Value: 1e-56
Query Start/End: Original strand, 11 - 239
Target Start/End: Original strand, 28746464 - 28746684
Alignment:
Q  11 cataggtgttatactatatccaaaaggaacattgttagtgttatattatatcgatccaaaaaggaagcactatactcaagagttaagttattttaattaa 110  Q
    |||| ||| ||||||||||||||||| |||||||||| ||||||| |||||||||||||||| |||| |||||| |||||||||||||||||||| ||||    
T  28746464 cataagtgctatactatatccaaaagaaacattgttattgttatactatatcgatccaaaaaagaagaactatattcaagagttaagttattttatttaa 28746563  T
Q  111 cattaattgggaagtattggggcagatattggtgcatgataattatcggatactctcctgatacgtatcgggaagtatcggataattannnnnnnnaaaa 210  Q
    | ||||||||||| ||||||||||| ||| ||||     ||||||||||||||| || ||||||||||||||||||||||||||||||        ||||    
T  28746564 cgttaattgggaattattggggcaggtataggtg-----taattatcggatactttcttgatacgtatcgggaagtatcggataatta---tttaaaaaa 28746655  T
Q  211 taaaatttaatcttcggatactcttctga 239  Q
     |||| |||||||||||||||||||||||    
T  28746656 aaaaaattaatcttcggatactcttctga 28746684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 109; E-Value: 6e-55
Query Start/End: Original strand, 16 - 239
Target Start/End: Original strand, 1776245 - 1776468
Alignment:
Q  16 gtgttatactatatccaaaaggaacattgttagtgttatattatatcgatccaaaaaggaagcactatactcaagagttaagttattttaattaacatta 115  Q
    ||||||||||||||||||||| ||||||||  ||| || |||||||||||||||||| |||||||||||||||||||||||||||||||| ||||  |||    
T  1776245 gtgttatactatatccaaaagaaacattgtccgtgcta-attatatcgatccaaaaaagaagcactatactcaagagttaagttattttatttaatgtta 1776343  T
Q  116 attgggaagtattggggcagatattggtgcatgataattatcggatactctcctgatacgtatcgggaagtatcggat-aattannnnnnnnaaaataaa 214  Q
    ||||| || ||||||||||| ||| |||||| |||||||||| |||||| | ||||||||||||||||||||||| || | ||         ||||||||    
T  1776344 attggaaattattggggcaggtataggtgcaggataattatcagatacttttctgatacgtatcgggaagtatcgaatgattttttttttaaaaaataaa 1776443  T
Q  215 atttaatcttcggatactcttctga 239  Q
    |||||||||||||||||||||||||    
T  1776444 atttaatcttcggatactcttctga 1776468  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 106; E-Value: 4e-53
Query Start/End: Original strand, 11 - 188
Target Start/End: Complemental strand, 5588353 - 5588176
Alignment:
Q  11 cataggtgttatactatatccaaaaggaacattgttagtgttatattatatcgatccaaaaaggaagcactatactcaagagttaagttattttaattaa 110  Q
    |||| ||| |||||| ||| |||||| |||||||||||||||||||||||||||||||||||  ||||||||||| ||||||||||||||||||| ||||    
T  5588353 cataagtgatatactgtatgcaaaagaaacattgttagtgttatattatatcgatccaaaaaataagcactatacgcaagagttaagttattttagttaa 5588254  T
Q  111 cattaattgggaagtattggggcagatattggtgcatgataattatcggatactctcctgatacgtatcgggaagtat 188  Q
    ||||||||||||||| ||||||||| ||| |||| | ||||||||| |||||||||| ||||| ||||| ||||||||    
T  5588253 cattaattgggaagtgttggggcaggtatcggtgtaggataattattggatactctcatgatatgtatcaggaagtat 5588176  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 106; E-Value: 4e-53
Query Start/End: Original strand, 11 - 198
Target Start/End: Complemental strand, 24585851 - 24585662
Alignment:
Q  11 cataggtgttatactatatccaaaaggaa-cattgttagtgttatattatatcgatccaaaaaggaagcactatactcaagagttaagttattttaatt- 108  Q
    |||| ||| |||||||||||||||| ||| ||||||||||| |||| |||||||||||||||| ||| |||||||||||||||||||||||||||| ||     
T  24585851 cataagtgctatactatatccaaaaagaaacattgttagtgctatactatatcgatccaaaaaagaatcactatactcaagagttaagttattttagtta 24585752  T
Q  109 aacattaattgggaagtattggggcagatattggtgcatgataattatcggatactctcctgatacgtatcgggaagtatcggataatta 198  Q
    |||||||||||||||||||| |||||| |||| ||||| ||||||||||| ||||||||||||||||||||  ||| ||| |||||||||    
T  24585751 aacattaattgggaagtattagggcaggtattagtgcaggataattatcgaatactctcctgatacgtatcaagaaatattggataatta 24585662  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 106; E-Value: 4e-53
Query Start/End: Original strand, 15 - 184
Target Start/End: Original strand, 40431829 - 40431997
Alignment:
Q  15 ggtgttatactatatccaaaaggaacattgttagtgttatattatatcgatccaaaaaggaagcactatactcaagagttaagttattttaattaacatt 114  Q
    ||||||||||||||||||||||||||||||||||||||||| |||||||||  |||||||| ||||||||||||| ||||||||||||||| | ||||||    
T  40431829 ggtgttatactatatccaaaaggaacattgttagtgttatactatatcgataaaaaaagga-gcactatactcaatagttaagttattttagtaaacatt 40431927  T
Q  115 aattgggaagtattggggcagatattggtgcatgataattatcggatactctcctgatacgtatcgggaa 184  Q
    |||||  |||||||||||||| ||  |||||| ||||||||||||||||| |||||||||||||| ||||    
T  40431928 aattgaaaagtattggggcaggtaacggtgcaggataattatcggatactgtcctgatacgtatcaggaa 40431997  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 102; E-Value: 9e-51
Query Start/End: Original strand, 11 - 160
Target Start/End: Complemental strand, 4355627 - 4355478
Alignment:
Q  11 cataggtgttatactatatccaaaaggaacattgttagtgttatattatatcgatccaaaaaggaagcactatactcaagagttaagttattttaattaa 110  Q
    |||| ||| ||||||||||||||||| |||||||||||||||||| |||||||||||||||| |||||||||| ||||||||||||||||||||| ||||    
T  4355627 cataagtgctatactatatccaaaagaaacattgttagtgttatactatatcgatccaaaaaagaagcactattctcaagagttaagttattttagttaa 4355528  T
Q  111 cattaattgggaagtattggggcagatattggtgcatgataattatcgga 160  Q
    ||||||||||||||||||||||||| |||  ||| | |||||||||||||    
T  4355527 cattaattgggaagtattggggcaggtatcagtgtaggataattatcgga 4355478  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 88; E-Value: 2e-42
Query Start/End: Original strand, 20 - 239
Target Start/End: Complemental strand, 2319603 - 2319361
Alignment:
Q  20 tatactatatccaaaaggaacattgttagtgttatattatatcgatccaaaaaggaagcactata----------------------ctcaagagttaag 97  Q
    |||||||||||||||||||||||||||||||||||| |||||| ||||||||| |||||||||||                      ||||| |||||||    
T  2319603 tatactatatccaaaaggaacattgttagtgttatactatatcaatccaaaaaagaagcactatatccataaaaaaatgcatcagtactcaatagttaag 2319504  T
Q  98 ttattttaattaacattaattgggaagtattggggcagatattggtgcatgataattatcggatactctcctgatacgtatcgggaagtatcggataatt 197  Q
    |||||||| |||||||||||||||||||||  ||||||||||   | || |||||||||||||||||||||||||||||||||||| |||||||||||||    
T  2319503 ttattttagttaacattaattgggaagtatcagggcagatatcaatccaggataattatcggatactctcctgatacgtatcgggacgtatcggataatt 2319404  T
Q  198 a-nnnnnnnnaaaataaaatttaatcttcggatactcttctga 239  Q
    |         |||||||||||||||||||||||||||||||||    
T  2319403 attttttaaaaaaataaaatttaatcttcggatactcttctga 2319361  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 87; E-Value: 8e-42
Query Start/End: Original strand, 82 - 239
Target Start/End: Complemental strand, 34146424 - 34146266
Alignment:
Q  82 atactcaagagttaagttattttaattaacattaattgggaagtattggggcagatattggtgcatgataattatcggatactctcctgatacgtatcgg 181  Q
    ||||||||||||||| |||||||| ||||||||||||||||||||| |||||||||||  |||||  ||||||||||||||||||||||||||||||| |    
T  34146424 atactcaagagttaaattattttagttaacattaattgggaagtatcggggcagatatcagtgcagaataattatcggatactctcctgatacgtatcag 34146325  T
Q  182 gaagtatcggataatta-nnnnnnnnaaaataaaatttaatcttcggatactcttctga 239  Q
    |||||||||||||||||         |||||||||||||||||| ||||||||| ||||    
T  34146324 gaagtatcggataattattttttttaaaaataaaatttaatctttggatactctcctga 34146266  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 86; E-Value: 3e-41
Query Start/End: Original strand, 85 - 198
Target Start/End: Original strand, 14217027 - 14217140
Alignment:
Q  85 ctcaagagttaagttattttaattaacattaattgggaagtattggggcagatattggtgcatgataattatcggatactctcctgatacgtatcgggaa 184  Q
    |||||||||||||| |||||| ||||||||||||||||||||||||||||  |||  ||||| |||||||||||||||||||||||||||||||||||||    
T  14217027 ctcaagagttaagtcattttacttaacattaattgggaagtattggggcatgtatcagtgcaggataattatcggatactctcctgatacgtatcgggaa 14217126  T
Q  185 gtatcggataatta 198  Q
    ||||||||||||||    
T  14217127 gtatcggataatta 14217140  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 77; E-Value: 8e-36
Query Start/End: Original strand, 82 - 198
Target Start/End: Complemental strand, 21104726 - 21104610
Alignment:
Q  82 atactcaagagttaagttattttaattaacattaattgggaagtattggggcagatattggtgcatgataattatcggatactctcctgatacgtatcgg 181  Q
    |||||||| ||||||||||||||| ||||||||||||||||||||| ||||||||||| |||| | |||||| |||||||||| ||||||||||||| ||    
T  21104726 atactcaaaagttaagttattttagttaacattaattgggaagtatcggggcagatatcggtgtaggataatgatcggatactttcctgatacgtatagg 21104627  T
Q  182 gaagtatcggataatta 198  Q
    ||| |||||||||||||    
T  21104626 gaaatatcggataatta 21104610  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 77; E-Value: 8e-36
Query Start/End: Original strand, 86 - 235
Target Start/End: Complemental strand, 35342558 - 35342407
Alignment:
Q  86 tcaagagttaagttattttaattaacattaattgggaagtattggggcagatattggtgcatgataattatcggatactctcctgatacgtatcgggaag 185  Q
    |||||||||||||||||||| |||||||||||||||||||||  |||||||||   ||| | |||||| |||||||||||||||||||||||||||||||    
T  35342558 tcaagagttaagttattttagttaacattaattgggaagtatcagggcagatacctgtgtaggataatgatcggatactctcctgatacgtatcgggaag 35342459  T
Q  186 tatcggataatta--nnnnnnnnaaaataaaatttaatcttcggatactctt 235  Q
    |||| ||||||||          |||||||||||||||||||||||||||||    
T  35342458 tatcagataattatttttttttaaaaataaaatttaatcttcggatactctt 35342407  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 72; E-Value: 7e-33
Query Start/End: Original strand, 83 - 198
Target Start/End: Original strand, 3545455 - 3545570
Alignment:
Q  83 tactcaagagttaagttattttaattaacattaattgggaagtattggggcagatattggtgcatgataattatcggatactctcctgatacgtatcggg 182  Q
    ||||||||| |||||||||||||||||||||||||| |||||| |||||| ||||||  |||||||||||||||| ||||||||| ||||| ||||||||    
T  3545455 tactcaagaattaagttattttaattaacattaattaggaagttttggggaagatatcagtgcatgataattatcagatactctcttgatatgtatcggg 3545554  T
Q  183 aagtatcggataatta 198  Q
    ||| ||| ||||||||    
T  3545555 aagcatctgataatta 3545570  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 86 - 239
Target Start/End: Complemental strand, 12206264 - 12206111
Alignment:
Q  86 tcaagagttaagttattttaattaacattaattgggaagtattggggcagatattggtgcatgataattatcggatactctcctgatacgtatcgggaag 185  Q
    |||||||||||||||||||| ||| ||||||||||||||||| |||||| ||||  ||||| |||||||||||||||||||| ||||||||||||  |      
T  12206264 tcaagagttaagttattttagttaccattaattgggaagtatcggggcatatatcagtgcaggataattatcggatactctcatgatacgtatcgaaatt 12206165  T
Q  186 tatcggataattannnnnnnnaaaataaaatttaatcttcggatactcttctga 239  Q
    |||||||||||||         ||||||||||||||||||| ||||||| ||||    
T  12206164 tatcggataattattattttttaaataaaatttaatcttcgaatactctcctga 12206111  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 20 - 239
Target Start/End: Original strand, 31235976 - 31236218
Alignment:
Q  20 tatactatatccaaaaggaacattgttagtgttatattatatcgatccaaaaaggaagcactata----------------------ctcaagagttaag 97  Q
    |||||||||||||||||||||||||||||||||||| |||||||||| ||||| |||||||||||                      || ||||||||||    
T  31235976 tatactatatccaaaaggaacattgttagtgttatactatatcgatctaaaaaagaagcactatatccaaaaaaaaacacatcagtactgaagagttaag 31236075  T
Q  98 ttattttaattaacattaattgggaagtattggggcagatattggtgcatgataattatcggatactctcctgatacgtatcgggaagtatcggataatt 197  Q
    |||||||| |||||||| | || ||| ||| | ||||||||| | || | |||||||||| ||||||||||||||||||||||||||||||||| | |||    
T  31236076 ttattttagttaacatttactgtgaaatatcgaggcagatatcgatgtaggataattatcagatactctcctgatacgtatcgggaagtatcggctgatt 31236175  T
Q  198 annnnnnnnaaaa-taaaatttaatcttcggatactcttctga 239  Q
    |        |||| |||||||||||||||||||||||| ||||    
T  31236176 attttttaaaaaattaaaatttaatcttcggatactctcctga 31236218  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 17 - 81
Target Start/End: Complemental strand, 18301426 - 18301362
Alignment:
Q  17 tgttatactatatccaaaaggaacattgttagtgttatattatatcgatccaaaaaggaagcact 81  Q
    ||||||| |||||||||||||||||||| ||||| ||||||||||||||||||||| ||||||||    
T  18301426 tgttatattatatccaaaaggaacattgctagtgctatattatatcgatccaaaaaagaagcact 18301362  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 16 - 84
Target Start/End: Complemental strand, 35342649 - 35342581
Alignment:
Q  16 gtgttatactatatccaaaaggaacattgttagtgttatattatatcgatccaaaaaggaagcactata 84  Q
    |||||||| ||||||||||||||||||||||||||||||| |||||||||| ||||| ||| |||||||    
T  35342649 gtgttatattatatccaaaaggaacattgttagtgttatactatatcgatctaaaaaagaaacactata 35342581  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 25 - 84
Target Start/End: Complemental strand, 5371398 - 5371339
Alignment:
Q  25 tatatccaaaaggaacattgttagtgttatattatatcgatccaaaaaggaagcactata 84  Q
    |||||||||||||||||||||||||| |||| |||||||||||||||| |||||||||||    
T  5371398 tatatccaaaaggaacattgttagtgctatactatatcgatccaaaaaagaagcactata 5371339  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 17 - 72
Target Start/End: Complemental strand, 20537170 - 20537115
Alignment:
Q  17 tgttatactatatccaaaaggaacattgttagtgttatattatatcgatccaaaaa 72  Q
    |||||||||||||||||||||||||||||||||| |||| ||||||||||||||||    
T  20537170 tgttatactatatccaaaaggaacattgttagtgctatactatatcgatccaaaaa 20537115  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 152 - 239
Target Start/End: Complemental strand, 35996816 - 35996729
Alignment:
Q  152 attatcggatactctcctgatacgtatcgggaagtatcggataattannnnnnnnaaaataaaatttaatcttcggatactcttctga 239  Q
    ||||||| ||||| |||||||||||||||||||||||||||||||||        |||||||||||||||||||| ||||||| ||||    
T  35996816 attatcgaatactttcctgatacgtatcgggaagtatcggataattattttttaaaaaataaaatttaatcttcgaatactctcctga 35996729  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 83 - 179
Target Start/End: Complemental strand, 9293348 - 9293252
Alignment:
Q  83 tactcaagagttaagttattttaattaacattaattgggaagtattggggcagatattggtgcatgataattatcggatactctcctgatacgtatc 179  Q
    ||||||| |||| |||||||||| |||||||||||||| || | ||||||| | ||| ||||||  ||||| ||| |||||||||||||||||||||    
T  9293348 tactcaatagttgagttattttagttaacattaattggaaaatcttggggcgggtatcggtgcagaataatgatcagatactctcctgatacgtatc 9293252  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 20 - 84
Target Start/End: Complemental strand, 12819643 - 12819579
Alignment:
Q  20 tatactatatccaaaaggaacattgttagtgttatattatatcgatccaaaaaggaagcactata 84  Q
    |||||||||||||||||||| ||||||| || |||| |||||||||||||||| |||||||||||    
T  12819643 tatactatatccaaaaggaatattgttaatgctatactatatcgatccaaaaaagaagcactata 12819579  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 83 - 197
Target Start/End: Complemental strand, 10573737 - 10573623
Alignment:
Q  83 tactcaagagttaagttattttaattaacattaattgggaagtattggggcagatattggtgcatgataattatcggatactctcctgatacgtatcggg 182  Q
    ||||||| ||||||||||||||  ||||||||||||| ||| ||| ||| ||  ||| | ||||  |||||||||||||||||||| |||||||||  ||    
T  10573737 tactcaatagttaagttattttggttaacattaattgagaaatatcgggacatgtatcgatgcagaataattatcggatactctccagatacgtatatgg 10573638  T
Q  183 aagtatcggataatt 197  Q
    |||||| | ||||||    
T  10573637 aagtattgaataatt 10573623  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 15 - 84
Target Start/End: Original strand, 45158961 - 45159030
Alignment:
Q  15 ggtgttatactatatccaaaaggaacattgttagtgttatattatatcgatccaaaaaggaagcactata 84  Q
    |||| |||||||||||||||| ||||||| |||||| |||| |||||||||| ||||| |||||||||||    
T  45158961 ggtgctatactatatccaaaaagaacatttttagtgctatactatatcgatctaaaaaagaagcactata 45159030  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 23 - 84
Target Start/End: Original strand, 4169802 - 4169862
Alignment:
Q  23 actatatccaaaaggaacattgttagtgttatattatatcgatccaaaaaggaagcactata 84  Q
    |||||||| ||||||||| |||||||||||||| |||||||||||||||| |||||| ||||    
T  4169802 actatatcaaaaaggaac-ttgttagtgttatactatatcgatccaaaaatgaagcattata 4169862  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 23 - 84
Target Start/End: Original strand, 6496953 - 6497013
Alignment:
Q  23 actatatccaaaaggaacattgttagtgttatattatatcgatccaaaaaggaagcactata 84  Q
    |||||||||||||||||| ||||||||  |||| |||||||||||||||| |||||||||||    
T  6496953 actatatccaaaaggaac-ttgttagtcctatactatatcgatccaaaaaagaagcactata 6497013  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 28 - 89
Target Start/End: Complemental strand, 21104803 - 21104742
Alignment:
Q  28 atccaaaaggaacattgttagtgttatattatatcgatccaaaaaggaagcactatactcaa 89  Q
    |||||||||||| |||||||||| |||| ||||||||| |||||| ||||||||||| ||||    
T  21104803 atccaaaaggaatattgttagtgatatactatatcgatacaaaaatgaagcactatattcaa 21104742  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 23 - 84
Target Start/End: Complemental strand, 22485105 - 22485045
Alignment:
Q  23 actatatccaaaaggaacattgttagtgttatattatatcgatccaaaaaggaagcactata 84  Q
    |||||||||||||||||| ||||||||| |||| |||||||||||||||| ||| |||||||    
T  22485105 actatatccaaaaggaac-ttgttagtgctatactatatcgatccaaaaaagaatcactata 22485045  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 23 - 84
Target Start/End: Original strand, 40308118 - 40308178
Alignment:
Q  23 actatatccaaaaggaacattgttagtgttatattatatcgatccaaaaaggaagcactata 84  Q
    |||||||||||||||||| ||||||||| |||| |||||||||||||||| ||| |||||||    
T  40308118 actatatccaaaaggaac-ttgttagtgctatactatatcgatccaaaaaagaatcactata 40308178  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 17 - 72
Target Start/End: Complemental strand, 34146511 - 34146456
Alignment:
Q  17 tgttatactatatccaaaaggaacattgttagtgttatattatatcgatccaaaaa 72  Q
    ||||||||||||||||||||||||| |||||||| |||| |||||| ||| |||||    
T  34146511 tgttatactatatccaaaaggaacactgttagtgctatactatatcaatctaaaaa 34146456  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 156 - 189
Target Start/End: Complemental strand, 3563941 - 3563908
Alignment:
Q  156 tcggatactctcctgatacgtatcgggaagtatc 189  Q
    ||||||||||||||||||||||||||||||||||    
T  3563941 tcggatactctcctgatacgtatcgggaagtatc 3563908  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 23 - 84
Target Start/End: Original strand, 7807137 - 7807197
Alignment:
Q  23 actatatccaaaaggaacattgttagtgttatattatatcgatccaaaaaggaagcactata 84  Q
    ||||||| |||||||||  |||||||||||||| |||||||||||||||| ||| |||||||    
T  7807137 actatattcaaaaggaat-ttgttagtgttatactatatcgatccaaaaaagaatcactata 7807197  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 156 - 189
Target Start/End: Complemental strand, 44156698 - 44156665
Alignment:
Q  156 tcggatactctcctgatacgtatcgggaagtatc 189  Q
    ||||||||||||||||||||||||||||||||||    
T  44156698 tcggatactctcctgatacgtatcgggaagtatc 44156665  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 17 - 61
Target Start/End: Complemental strand, 9293693 - 9293649
Alignment:
Q  17 tgttatactatatccaaaaggaacattgttagtgttatattatat 61  Q
    ||||||||||||||||||| |||||||||||||| ||||| ||||    
T  9293693 tgttatactatatccaaaaagaacattgttagtgctatataatat 9293649  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 158 - 189
Target Start/End: Complemental strand, 34146279 - 34146248
Alignment:
Q  158 ggatactctcctgatacgtatcgggaagtatc 189  Q
    ||||||||||||||||||||||||||||||||    
T  34146279 ggatactctcctgatacgtatcgggaagtatc 34146248  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 158 - 189
Target Start/End: Original strand, 40497404 - 40497435
Alignment:
Q  158 ggatactctcctgatacgtatcgggaagtatc 189  Q
    ||||||||||||||||||||||||||||||||    
T  40497404 ggatactctcctgatacgtatcgggaagtatc 40497435  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #42
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 42 - 84
Target Start/End: Complemental strand, 6124991 - 6124949
Alignment:
Q  42 ttgttagtgttatattatatcgatccaaaaaggaagcactata 84  Q
    |||||||||||||| |||||||||||||||| ||| |||||||    
T  6124991 ttgttagtgttatactatatcgatccaaaaaagaatcactata 6124949  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #43
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 158 - 192
Target Start/End: Complemental strand, 22484366 - 22484332
Alignment:
Q  158 ggatactctcctgatacgtatcgggaagtatcgga 192  Q
    ||||||||||| |||||||||||||||||||||||    
T  22484366 ggatactctccggatacgtatcgggaagtatcgga 22484332  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #44
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 160 - 189
Target Start/End: Complemental strand, 4355422 - 4355393
Alignment:
Q  160 atactctcctgatacgtatcgggaagtatc 189  Q
    ||||||||||||||||||||||||||||||    
T  4355422 atactctcctgatacgtatcgggaagtatc 4355393  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #45
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 158 - 191
Target Start/End: Complemental strand, 7876813 - 7876780
Alignment:
Q  158 ggatactctcctgatacgtatcgggaagtatcgg 191  Q
    ||||||||||| ||||||||||||||||||||||    
T  7876813 ggatactctccggatacgtatcgggaagtatcgg 7876780  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #46
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 158 - 191
Target Start/End: Complemental strand, 16561899 - 16561866
Alignment:
Q  158 ggatactctcctgatacgtatcgggaagtatcgg 191  Q
    ||||||||||| ||||||||||||||||||||||    
T  16561899 ggatactctccggatacgtatcgggaagtatcgg 16561866  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #47
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 156 - 189
Target Start/End: Original strand, 31236203 - 31236236
Alignment:
Q  156 tcggatactctcctgatacgtatcgggaagtatc 189  Q
    ||||||||||||||||||||||||||||| ||||    
T  31236203 tcggatactctcctgatacgtatcgggaaatatc 31236236  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #48
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 158 - 191
Target Start/End: Complemental strand, 33324917 - 33324884
Alignment:
Q  158 ggatactctcctgatacgtatcgggaagtatcgg 191  Q
    ||||||||||| ||||||||||||||||||||||    
T  33324917 ggatactctccggatacgtatcgggaagtatcgg 33324884  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #49
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 158 - 191
Target Start/End: Original strand, 38602341 - 38602374
Alignment:
Q  158 ggatactctcctgatacgtatcgggaagtatcgg 191  Q
    ||||||||||| ||||||||||||||||||||||    
T  38602341 ggatactctccggatacgtatcgggaagtatcgg 38602374  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #50
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 158 - 191
Target Start/End: Original strand, 40308916 - 40308949
Alignment:
Q  158 ggatactctcctgatacgtatcgggaagtatcgg 191  Q
    ||||||||||| ||||||||||||||||||||||    
T  40308916 ggatactctccggatacgtatcgggaagtatcgg 40308949  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #51
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 161 - 198
Target Start/End: Complemental strand, 40536398 - 40536361
Alignment:
Q  161 tactctcctgatacgtatcgggaagtatcggataatta 198  Q
    |||||| || ||||||||||||||||||||||||||||    
T  40536398 tactcttctcatacgtatcgggaagtatcggataatta 40536361  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #52
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 17 - 49
Target Start/End: Complemental strand, 12206296 - 12206264
Alignment:
Q  17 tgttatactatatccaaaaggaacattgttagt 49  Q
    ||||||| |||||||||||||||||||||||||    
T  12206296 tgttatattatatccaaaaggaacattgttagt 12206264  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #53
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 17 - 45
Target Start/End: Complemental strand, 40536526 - 40536498
Alignment:
Q  17 tgttatactatatccaaaaggaacattgt 45  Q
    |||||||||||||||||||||||||||||    
T  40536526 tgttatactatatccaaaaggaacattgt 40536498  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 154; Significance: 9e-82; HSPs: 58)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 154; E-Value: 9e-82
Query Start/End: Original strand, 11 - 239
Target Start/End: Original strand, 31946030 - 31946258
Alignment:
Q  11 cataggtgttatactatatccaaaaggaacattgttagtgttatattatatcgatccaaaaaggaagcactatactcaagagttaagttattttaattaa 110  Q
    |||| ||| ||||||||||| ||||||||||||||||||| ||||  ||||||||||||||| |||||||||||||||||||||||||||||||||||||    
T  31946030 cataagtgctatactatatctaaaaggaacattgttagtgctatac-atatcgatccaaaaaagaagcactatactcaagagttaagttattttaattaa 31946128  T
Q  111 cattaattgggaagtattggggcagatattggtgcatgataattatcggatactctcctgatacgtatcgggaagtatcggataatta-nnnnnnnnaaa 209  Q
    ||||||||||||||||||||||||||||||| | || |||||||||||||||||||||||||||||||||||||||||||||||||||         |||    
T  31946129 cattaattgggaagtattggggcagatattgttacaggataattatcggatactctcctgatacgtatcgggaagtatcggataattattttttttaaaa 31946228  T
Q  210 ataaaatttaatcttcggatactcttctga 239  Q
    ||||||||||||||||||||||||||||||    
T  31946229 ataaaatttaatcttcggatactcttctga 31946258  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 132; E-Value: 1e-68
Query Start/End: Original strand, 11 - 239
Target Start/End: Original strand, 36511736 - 36511966
Alignment:
Q  11 cataggtgttatactatatccaaaaggaacattgttagtgttatattatatcgatccaaaaaggaagcactatactcaagagttaagttattttaattaa 110  Q
    |||| ||| ||||||||||||||||| |||||| |||||| ||||||||||||||||||||| |||||||||||||||||||||||||||||||| ||||    
T  36511736 cataagtgctatactatatccaaaagaaacattcttagtgctatattatatcgatccaaaaaagaagcactatactcaagagttaagttattttatttaa 36511835  T
Q  111 cattaattgggaagtattggggcagatattggtgcatgataattatcggatactctcctgatacgtatcgggaagtatcggataatta--nnnnnnnnaa 208  Q
    | ||||||||||| ||||||||||| |||  || || ||||||||||||||||| |||||||||||||| ||||||||||||||||||          ||    
T  36511836 cgttaattgggaattattggggcaggtataagttcaggataattatcggatactttcctgatacgtatcaggaagtatcggataattatttttttaaaaa 36511935  T
Q  209 aataaaatttaatcttcggatactcttctga 239  Q
    |||||||||||||||||||||||||||||||    
T  36511936 aataaaatttaatcttcggatactcttctga 36511966  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 132; E-Value: 1e-68
Query Start/End: Original strand, 11 - 194
Target Start/End: Complemental strand, 51859110 - 51858927
Alignment:
Q  11 cataggtgttatactatatccaaaaggaacattgttagtgttatattatatcgatccaaaaaggaagcactatactcaagagttaagttattttaattaa 110  Q
    |||| ||| ||||||||||||||||| |||||||||||||||||| |||||||||||||||| ||||||  |||||||||||||||||||||||| ||||    
T  51859110 cataagtgctatactatatccaaaagaaacattgttagtgttatactatatcgatccaaaaaagaagcataatactcaagagttaagttattttagttaa 51859011  T
Q  111 cattaattgggaagtattggggcagatattggtgcatgataattatcggatactctcctgatacgtatcgggaagtatcggata 194  Q
    ||||||||||||||||||| ||||| |||  ||||| |||||||||||||||||||||||||||||||||||||||||||||||    
T  51859010 cattaattgggaagtattgaggcaggtatcagtgcaagataattatcggatactctcctgatacgtatcgggaagtatcggata 51858927  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 128; E-Value: 3e-66
Query Start/End: Original strand, 11 - 198
Target Start/End: Complemental strand, 1177292 - 1177105
Alignment:
Q  11 cataggtgttatactatatccaaaaggaacattgttagtgttatattatatcgatccaaaaaggaagcactatactcaagagttaagttattttaattaa 110  Q
    |||| ||| ||||||||||||||||| ||||||||||||| |||| |||||| ||||||||| |||||| ||||||||||||||||||||||||| ||||    
T  1177292 cataagtgctatactatatccaaaagaaacattgttagtgctatactatatcaatccaaaaaagaagcattatactcaagagttaagttattttatttaa 1177193  T
Q  111 cattaattgggaagtattggggcagatattggtgcatgataattatcggatactctcctgatacgtatcgggaagtatcggataatta 198  Q
    | ||||||||||| ||||||||||| ||| |||||| ||||||||||||||||| |||||||||||||||||||||||||||||||||    
T  1177192 cgttaattgggaattattggggcaggtataggtgcaggataattatcggatactttcctgatacgtatcgggaagtatcggataatta 1177105  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 118; E-Value: 3e-60
Query Start/End: Original strand, 11 - 239
Target Start/End: Complemental strand, 40694385 - 40694156
Alignment:
Q  11 cataggtgttatactatatccaaaaggaacattgttagtgttatattatatcgatccaaaaaggaagcactatactcaagagttaagttattttaattaa 110  Q
    |||| ||| |||| |||||||||||| ||||||||||||  |||| ||||||||| |||||| |||||| ||||||||||||||||||||||||| ||||    
T  40694385 cataagtgatatattatatccaaaagaaacattgttagtactatactatatcgattcaaaaaagaagcattatactcaagagttaagttattttagttaa 40694286  T
Q  111 cattaattgggaagtattggggcagatattggtgcatgataattatcggatactctcctgatacgtatcgggaagtatcggataatta-nnnnnnnnaaa 209  Q
     ||||||||||||||||||||||||||||  ||||| ||||||||| |||||||||||| ||||||||||||||||||| ||||||||         |||    
T  40694285 tattaattgggaagtattggggcagatatcagtgcaggataattattggatactctcctcatacgtatcgggaagtatcagataattattttataaaaaa 40694186  T
Q  210 ataaaatttaatcttcggatactcttctga 239  Q
    |||||||||||||||| |||||||| ||||    
T  40694185 ataaaatttaatcttcagatactctcctga 40694156  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 90; E-Value: 1e-43
Query Start/End: Original strand, 11 - 197
Target Start/End: Complemental strand, 47607416 - 47607242
Alignment:
Q  11 cataggtgttatactatatccaaaaggaacattgttagtgttatattatatcgatccaaaaaggaagcactatactcaagagttaagttattttaattaa 110  Q
    |||| ||| ||||||||||||||||| ||||||||| ||| |||||||||||||||||||||  ||||| ||||||||| ||||||||||| ||| ||||    
T  47607416 cataagtgctatactatatccaaaagaaacattgttggtgctatattatatcgatccaaaaaaaaagcattatactcaacagttaagttatcttagttaa 47607317  T
Q  111 cattaattgggaagtattggggcagatattggtgcatgataattatcggatactctcctgatacgtatcgggaagtatcggataatt 197  Q
    |||||||| |||||||||||||||||            |||||||||||||||| |||||||||||||||||||||||| |||||||    
T  47607316 cattaattaggaagtattggggcaga------------ataattatcggatactatcctgatacgtatcgggaagtatcagataatt 47607242  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 87; E-Value: 8e-42
Query Start/End: Original strand, 16 - 239
Target Start/End: Complemental strand, 2586648 - 2586422
Alignment:
Q  16 gtgttatactatatccaaaaggaacattgttagtgttatattatatcgatccaaaaaggaag-cacta-tactcaagagttaagttattttaattaacat 113  Q
    |||||||| ||||||||||||||||||||||| ||||||| |||||||||| ||||| |||  ||  | | || |||||||||||||||||| |||||||    
T  2586648 gtgttatattatatccaaaaggaacattgttaatgttatactatatcgatctaaaaaagaacacatcagtcctgaagagttaagttattttagttaacat 2586549  T
Q  114 taattgggaagtattggggcagatattggtgcatgataattatcggatactctcctgatacgtatcgggaagtatcggataatta-nnnnnnnnaaaata 212  Q
    |||||||||||||| ||||||||||  |||| | |||||| ||| |||||||||||| || |||||||||||||| |||||||||         |||| |    
T  2586548 taattgggaagtatcggggcagataccggtgtaggataatgatcagatactctcctggtatgtatcgggaagtataggataattattttttaaaaaaaca 2586449  T
Q  213 aaatttaatcttcggatactcttctga 239  Q
    || ||||||||||||||||||||||||    
T  2586448 aattttaatcttcggatactcttctga 2586422  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 84; E-Value: 5e-40
Query Start/End: Original strand, 16 - 239
Target Start/End: Original strand, 24793517 - 24793763
Alignment:
Q  16 gtgttatactatatccaaaaggaacattgttagtgttatattatatcgatccaaaaaggaagcactata----------------------ctcaagagt 93  Q
    |||||||||||||||||||||||||||||||||||||||| |||||||||| ||||| ||| |||||||                      |||||||||    
T  24793517 gtgttatactatatccaaaaggaacattgttagtgttatactatatcgatctaaaaaagaaacactatatttaaaaaagaacacatcagtactcaagagt 24793616  T
Q  94 taagttattttaattaacattaattgggaagtattggggcagatattggtgcatgataattatcggatactctcctgatacgtatcgggaagtatcggat 193  Q
    |||||||||||| ||||||||||||||||||||| | || || || ||||| | |||||| |||||||||||||||||||||||| |||||||||| |||    
T  24793617 taagttattttagttaacattaattgggaagtatcgaggtagttactggtgtaggataatgatcggatactctcctgatacgtattgggaagtatcagat 24793716  T
Q  194 aatta-nnnnnnnnaaaataaaatttaatcttcggatactcttctga 239  Q
    |||||         |||||||||||||||||||||||||||||||||    
T  24793717 aattatttttttaaaaaataaaatttaatcttcggatactcttctga 24793763  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 82; E-Value: 8e-39
Query Start/End: Original strand, 83 - 239
Target Start/End: Complemental strand, 17892491 - 17892334
Alignment:
Q  83 tactcaagagttaagttattttaattaacattaattgggaagtattggggcagatattggtgcatgataattatcggatactctcctgatacgtatcggg 182  Q
    ||||||||||||||||||||||  ||||||||||||||||||||| |||||||||| ||||| | |||||| || ||||||||||||||||||||| |||    
T  17892491 tactcaagagttaagttatttttgttaacattaattgggaagtatcggggcagatactggtgtaggataatgattggatactctcctgatacgtattggg 17892392  T
Q  183 aagtatcggataatta-nnnnnnnnaaaataaaatttaatcttcggatactcttctga 239  Q
    |||||||  |||||||         |||||||||||||||||||||||||||||||||    
T  17892391 aagtatcatataattatttttttttaaaataaaatttaatcttcggatactcttctga 17892334  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 5 - 192
Target Start/End: Complemental strand, 51675110 - 51674923
Alignment:
Q  5 gagaagcataggtgttatactatatccaaaaggaacattgttagtgttatattatatcgatccaaaaaggaagcactatactcaagagttaagttatttt 104  Q
    ||||| |||| ||||||||||||||   ||||||| |||||||||| |||| |||||| ||||||||| |||||||||||||||| | ||||||||||||    
T  51675110 gagaatcataagtgttatactatattagaaaggaatattgttagtgatatactatatctatccaaaaaagaagcactatactcaaaaattaagttatttt 51675011  T
Q  105 aattaacattaattgggaagtattggggcagatattggtgcatgataattatcggatactctcctgatacgtatcgggaagtatcgga 192  Q
    | ||||||||||||||||| |||||  ||||||||  ||||| |||||||||   ||||| | ||||||  |||||| ||||||||||    
T  51675010 agttaacattaattgggaaatattgaagcagatatccgtgcaggataattataaaatacttttctgatatatatcggaaagtatcgga 51674923  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 16 - 198
Target Start/End: Original strand, 3109091 - 3109295
Alignment:
Q  16 gtgttatactatatccaaaaggaacattgttagtgttatattatatcgatccaaaaaggaagcactata----------------------ctcaagagt 93  Q
    |||||||||||||||||||||||||||||||||||||||| |||||||||| ||||| ||| |||||||                      |||||||||    
T  3109091 gtgttatactatatccaaaaggaacattgttagtgttatactatatcgatctaaaaaagaaacactatattcaaaaaataacacatcagtactcaagagt 3109190  T
Q  94 taagttattttaattaacattaattgggaagtattggggcagatattggtgcatgataattatcggatactctcctgatacgtatcgggaagtatcggat 193  Q
    |||||||||||| ||||||||||||||||||||| ||||||||||  |||| | |||||| || ||||||||||| ||||||||||| ||||||||||||    
T  3109191 taagttattttagttaacattaattgggaagtatcggggcagataccggtgtaggataatgattggatactctccggatacgtatcgagaagtatcggat 3109290  T
Q  194 aatta 198  Q
    |||||    
T  3109291 aatta 3109295  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 83 - 239
Target Start/End: Complemental strand, 36943912 - 36943755
Alignment:
Q  83 tactcaagagttaagttattttaattaacattaattgggaagtattggggcagatattggtgcatgataattatcggatactctcctgatacgtatcggg 182  Q
    ||||||||||||||||||||||| |||||||||||||||||||||  |||||||||  |||| | |||||| ||| ||||||||||||||||||||| ||    
T  36943912 tactcaagagttaagttattttagttaacattaattgggaagtatcagggcagataccggtgtaggataatgatcagatactctcctgatacgtatcagg 36943813  T
Q  183 aagtatcggataatta-nnnnnnnnaaaataaaatttaatcttcggatactcttctga 239  Q
    ||||||| ||||||||         |||||||| ||||||||||||||||||||||||    
T  36943812 aagtatcagataattatttttaaaaaaaataaattttaatcttcggatactcttctga 36943755  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 77; E-Value: 8e-36
Query Start/End: Original strand, 83 - 234
Target Start/End: Original strand, 46431808 - 46431960
Alignment:
Q  83 tactcaagagttaagttattttaattaacattaattgggaagtattggggcagatattggtgcatgataattatcggatactctcctgatacgtatcggg 182  Q
    ||||||||||||||||||||||| ||||||||||||| ||| |||  |||||| ||| |||||||||||||||||||||||||||||||||| |||||      
T  46431808 tactcaagagttaagttattttagttaacattaattgtgaaatatcagggcaggtatcggtgcatgataattatcggatactctcctgatacatatcgaa 46431907  T
Q  183 aagtatcggataatta-nnnnnnnnaaaataaaatttaatcttcggatactct 234  Q
    ||||||||||||||||         |||||||||||||||||| |||||||||    
T  46431908 aagtatcggataattatttttttttaaaataaaatttaatctttggatactct 46431960  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 74; E-Value: 5e-34
Query Start/End: Original strand, 83 - 188
Target Start/End: Complemental strand, 49470523 - 49470419
Alignment:
Q  83 tactcaagagttaagttattttaattaacattaattgggaagtattggggcagatattggtgcatgataattatcggatactctcctgatacgtatcggg 182  Q
    ||||||||||||||||||||||| |||||||||||||| |||||| |||||||||||  ||||| |||||||||| ||||||||||||||||||||||||    
T  49470523 tactcaagagttaagttattttagttaacattaattgg-aagtatcggggcagatatcagtgcaggataattatcagatactctcctgatacgtatcggg 49470425  T
Q  183 aagtat 188  Q
    ||||||    
T  49470424 aagtat 49470419  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 72; E-Value: 7e-33
Query Start/End: Original strand, 83 - 198
Target Start/End: Original strand, 42630359 - 42630474
Alignment:
Q  83 tactcaagagttaagttattttaattaacattaattgggaagtattggggcagatattggtgcatgataattatcggatactctcctgatacgtatcggg 182  Q
    |||| ||||||| |||||||||| ||||||||||||| ||||||| || ||||||||  ||||| |||||||||||||||||| ||||||||||||| ||    
T  42630359 tactgaagagttcagttattttagttaacattaattgtgaagtatcggagcagatatcagtgcaagataattatcggatactcacctgatacgtatcagg 42630458  T
Q  183 aagtatcggataatta 198  Q
    ||||||||||||||||    
T  42630459 aagtatcggataatta 42630474  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 67; E-Value: 7e-30
Query Start/End: Original strand, 83 - 181
Target Start/End: Original strand, 44521921 - 44522019
Alignment:
Q  83 tactcaagagttaagttattttaattaacattaattgggaagtattggggcagatattggtgcatgataattatcggatactctcctgatacgtatcgg 181  Q
    ||||||||||||||||||||||| |||||||||||||| |||||| |||||||||||   || | ||||||||||||||||||||||||||||||||||    
T  44521921 tactcaagagttaagttattttagttaacattaattggaaagtatcggggcagatatcaatgaaggataattatcggatactctcctgatacgtatcgg 44522019  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 83 - 239
Target Start/End: Original strand, 37992409 - 37992565
Alignment:
Q  83 tactcaagagttaagttattttaattaacattaattgggaagtattggggcagatattggtgcatgataattatcggatactctcctgatacgtatcggg 182  Q
    ||||||||||||||||||||||| ||||  ||||||| ||| ||| ||||||||||| ||||||  ||||| ||| ||||||||||||||| ||||||||    
T  37992409 tactcaagagttaagttattttagttaa--ttaattgagaaatatcggggcagatatcggtgcagaataatcatcagatactctcctgatatgtatcggg 37992506  T
Q  183 aagtatcggataatta--nnnnnnnnaaaataaaatttaatcttcggatactcttctga 239  Q
    || |||||||||||||          |||||||||||||||||| ||||||||||||||    
T  37992507 aattatcggataattatttttttaaaaaaataaaatttaatctttggatactcttctga 37992565  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 82 - 198
Target Start/End: Complemental strand, 754414 - 754298
Alignment:
Q  82 atactcaagagttaagttattttaattaacattaattgggaagtattggggcagatattggtgcatgataattatcggatactctcctgatacgtatcgg 181  Q
    |||| |||||||||||||| |||| |||||||||| ||| |||||| ||||| ||||| |||| | |||||| ||||||||||||||||||||||||| |    
T  754414 atacacaagagttaagttagtttagttaacattaaatggtaagtatcggggcggatatcggtgtaggataatgatcggatactctcctgatacgtatcag 754315  T
Q  182 gaagtatcggataatta 198  Q
    |||||||  ||||||||    
T  754314 gaagtatatgataatta 754298  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 25 - 181
Target Start/End: Complemental strand, 14614805 - 14614651
Alignment:
Q  25 tatatccaaaaggaacattgttagtgttatattatatcgatccaaaaaggaagcactatactcaagagttaagttattttaattaacattaattgggaag 124  Q
    |||||||||||| || |||||||||| |||||||||| |||| ||||| |||||| ||||||| |||||||| |||||||| |||||||||||| |||      
T  14614805 tatatccaaaagaaatattgttagtgctatattatattgatctaaaaaagaagcattatactcgagagttaaattattttagttaacattaatt-ggata 14614707  T
Q  125 tattggggcagatattggtgcatgataattatcggatactctcctgatacgtatcgg 181  Q
    ||||  ||||| |||  ||||| ||||||||||| ||| | | ||||||||||||||    
T  14614706 tatt-aggcaggtatcagtgcaggataattatcgaatattttactgatacgtatcgg 14614651  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 16 - 84
Target Start/End: Complemental strand, 36944001 - 36943933
Alignment:
Q  16 gtgttatactatatccaaaaggaacattgttagtgttatattatatcgatccaaaaaggaagcactata 84  Q
    |||||||||||||||||||||||||||||||||| ||||| |||||||||| ||||| ||| |||||||    
T  36944001 gtgttatactatatccaaaaggaacattgttagtattatactatatcgatctaaaaaagaaacactata 36943933  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 17 - 84
Target Start/End: Complemental strand, 5835274 - 5835207
Alignment:
Q  17 tgttatactatatccaaaaggaacattgttagtgttatattatatcgatccaaaaaggaagcactata 84  Q
    ||||||||||||||||||||||||||||||| || |||| |||||||||| ||||| |||||||||||    
T  5835274 tgttatactatatccaaaaggaacattgttaatgctatactatatcgatcaaaaaaagaagcactata 5835207  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 20 - 79
Target Start/End: Original strand, 44521836 - 44521895
Alignment:
Q  20 tatactatatccaaaaggaacattgttagtgttatattatatcgatccaaaaaggaagca 79  Q
    |||||||||||||||||||||||||||| ||||||| |||||||||||||||| ||||||    
T  44521836 tatactatatccaaaaggaacattgttaatgttatactatatcgatccaaaaaagaagca 44521895  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 15 - 84
Target Start/End: Complemental strand, 39958021 - 39957952
Alignment:
Q  15 ggtgttatactatatccaaaaggaacattgttagtgttatattatatcgatccaaaaaggaagcactata 84  Q
    |||||||||||||||| |||| |||||||||||||| |||| |||||||||| ||||| |||||||||||    
T  39958021 ggtgttatactatatctaaaaagaacattgttagtgctatactatatcgatctaaaaaagaagcactata 39957952  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 16 - 84
Target Start/End: Complemental strand, 17892580 - 17892512
Alignment:
Q  16 gtgttatactatatccaaaaggaacattgttagtgttatattatatcgatccaaaaaggaagcactata 84  Q
    |||||||||||||| ||||||||||||||||||||||||| |||||| ||| ||||| ||| |||||||    
T  17892580 gtgttatactatattcaaaaggaacattgttagtgttatactatatcaatctaaaaaagaaacactata 17892512  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 20 - 84
Target Start/End: Complemental strand, 28377338 - 28377274
Alignment:
Q  20 tatactatatccaaaaggaacattgttagtgttatattatatcgatccaaaaaggaagcactata 84  Q
    |||| ||||||||||| |||||||||||||| |||| |||||||||||||||| |||||||||||    
T  28377338 tatattatatccaaaaagaacattgttagtgctatactatatcgatccaaaaaagaagcactata 28377274  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 16 - 84
Target Start/End: Original strand, 42630264 - 42630332
Alignment:
Q  16 gtgttatactatatccaaaaggaacattgttagtgttatattatatcgatccaaaaaggaagcactata 84  Q
    |||||||||| ||||||||||||||||||||||||||||| || |||||| |||||| |||||| ||||    
T  42630264 gtgttatactctatccaaaaggaacattgttagtgttatactacatcgattcaaaaaagaagcattata 42630332  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 20 - 84
Target Start/End: Complemental strand, 52721682 - 52721618
Alignment:
Q  20 tatactatatccaaaaggaacattgttagtgttatattatatcgatccaaaaaggaagcactata 84  Q
    |||||||||| ||||| ||||||||||||||||||| |||||||||| ||||| |||||||||||    
T  52721682 tatactatattcaaaaagaacattgttagtgttatactatatcgatctaaaaaagaagcactata 52721618  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 20 - 84
Target Start/End: Original strand, 55900938 - 55901002
Alignment:
Q  20 tatactatatccaaaaggaacattgttagtgttatattatatcgatccaaaaaggaagcactata 84  Q
    |||| ||||||||||| ||||||||||||||||||| |||||||||||||||| |||||| ||||    
T  55900938 tatattatatccaaaatgaacattgttagtgttatactatatcgatccaaaaaagaagcattata 55901002  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 23 - 84
Target Start/End: Complemental strand, 41146442 - 41146382
Alignment:
Q  23 actatatccaaaaggaacattgttagtgttatattatatcgatccaaaaaggaagcactata 84  Q
    |||||||||||||||||| |||||||||||||| ||||||||| |||||| |||||||||||    
T  41146442 actatatccaaaaggaac-ttgttagtgttatactatatcgattcaaaaaagaagcactata 41146382  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 23 - 81
Target Start/End: Complemental strand, 53323177 - 53323120
Alignment:
Q  23 actatatccaaaaggaacattgttagtgttatattatatcgatccaaaaaggaagcact 81  Q
    |||||||||||||||||| ||||||||| |||| |||||||||||||||| ||||||||    
T  53323177 actatatccaaaaggaac-ttgttagtgctatactatatcgatccaaaaaagaagcact 53323120  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 11 - 79
Target Start/End: Original strand, 258872 - 258941
Alignment:
Q  11 cataggtgttatactatatccaaaa-ggaacattgttagtgttatattatatcgatccaaaaaggaagca 79  Q
    |||| |||||||||||||||||||| |||||||||||| || |||| ||||| |||||||||| ||||||    
T  258872 cataagtgttatactatatccaaaacggaacattgttactgctatactatattgatccaaaaaagaagca 258941  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 23 - 84
Target Start/End: Original strand, 3402854 - 3402914
Alignment:
Q  23 actatatccaaaaggaacattgttagtgttatattatatcgatccaaaaaggaagcactata 84  Q
    |||||||||||||||||| ||||||||| |||| |||||||||||||||| ||| |||||||    
T  3402854 actatatccaaaaggaac-ttgttagtgatatactatatcgatccaaaaaagaatcactata 3402914  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 15 - 84
Target Start/End: Complemental strand, 24784705 - 24784636
Alignment:
Q  15 ggtgttatactatatccaaaaggaacattgttagtgttatattatatcgatccaaaaaggaagcactata 84  Q
    |||| |||||||||||||||| |||||||| ||||| |||| |||||| ||| ||||| |||||||||||    
T  24784705 ggtgctatactatatccaaaaagaacattgatagtgctatactatatcaatctaaaaaagaagcactata 24784636  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 15 - 84
Target Start/End: Original strand, 24823561 - 24823630
Alignment:
Q  15 ggtgttatactatatccaaaaggaacattgttagtgttatattatatcgatccaaaaaggaagcactata 84  Q
    |||| |||||||||||||||| |||||||| ||||| |||| |||||| ||| ||||| |||||||||||    
T  24823561 ggtgctatactatatccaaaaagaacattgatagtgctatactatatcaatctaaaaaagaagcactata 24823630  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 83 - 179
Target Start/End: Original strand, 55901023 - 55901120
Alignment:
Q  83 tactcaagagttaagttattttaattaacattaattgggaagtattggggca-gatattggtgcatgataattatcggatactctcctgatacgtatc 179  Q
    ||||||||||||||||| ||||| | | ||||||||||||| |||||||||| | ||| |||| | ||||| ||||| ||||||| |||||| |||||    
T  55901023 tactcaagagttaagtttttttagtcaccattaattgggaaatattggggcagggtatcggtgtaggataactatcgaatactcttctgataagtatc 55901120  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 154 - 189
Target Start/End: Complemental strand, 51858935 - 51858900
Alignment:
Q  154 tatcggatactctcctgatacgtatcgggaagtatc 189  Q
    ||||||||||||||||||||||||||||||||||||    
T  51858935 tatcggatactctcctgatacgtatcgggaagtatc 51858900  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 148 - 198
Target Start/End: Original strand, 726496 - 726546
Alignment:
Q  148 gataattatcggatactctcctgatacgtatcgggaagtatcggataatta 198  Q
    |||||| ||||||||||||||||||||||||| ||||||||  ||||||||    
T  726496 gataatgatcggatactctcctgatacgtatcaggaagtatatgataatta 726546  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 23 - 73
Target Start/End: Complemental strand, 52573023 - 52572974
Alignment:
Q  23 actatatccaaaaggaacattgttagtgttatattatatcgatccaaaaag 73  Q
    |||||||||||||||||| ||||||||| |||| |||||||||||||||||    
T  52573023 actatatccaaaaggaac-ttgttagtgctatactatatcgatccaaaaag 52572974  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 17 - 50
Target Start/End: Original strand, 7952920 - 7952953
Alignment:
Q  17 tgttatactatatccaaaaggaacattgttagtg 50  Q
    ||||||||||||||||||||||||||||||||||    
T  7952920 tgttatactatatccaaaaggaacattgttagtg 7952953  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 23 - 84
Target Start/End: Original strand, 8063377 - 8063437
Alignment:
Q  23 actatatccaaaaggaacattgttagtgttatattatatcgatccaaaaaggaagcactata 84  Q
    ||||||||||||| |||| ||||||||| |||| |||||||||||||||| ||| |||||||    
T  8063377 actatatccaaaatgaac-ttgttagtgatatactatatcgatccaaaaaagaatcactata 8063437  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 23 - 72
Target Start/End: Complemental strand, 31227178 - 31227130
Alignment:
Q  23 actatatccaaaaggaacattgttagtgttatattatatcgatccaaaaa 72  Q
    |||||||||||||||||| ||||||||| |||| ||||||||||||||||    
T  31227178 actatatccaaaaggaac-ttgttagtgctatactatatcgatccaaaaa 31227130  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 23 - 72
Target Start/End: Original strand, 38492042 - 38492090
Alignment:
Q  23 actatatccaaaaggaacattgttagtgttatattatatcgatccaaaaa 72  Q
    |||||||||||||||||| ||||||||| |||| ||||||||||||||||    
T  38492042 actatatccaaaaggaac-ttgttagtgctatactatatcgatccaaaaa 38492090  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 20 - 65
Target Start/End: Complemental strand, 49470604 - 49470559
Alignment:
Q  20 tatactatatccaaaaggaacattgttagtgttatattatatcgat 65  Q
    |||||||||||||||||||||||||||||||  ||| |||||||||    
T  49470604 tatactatatccaaaaggaacattgttagtgacatactatatcgat 49470559  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 156 - 188
Target Start/End: Complemental strand, 21637766 - 21637734
Alignment:
Q  156 tcggatactctcctgatacgtatcgggaagtat 188  Q
    |||||||||||||||||||||||||||||||||    
T  21637766 tcggatactctcctgatacgtatcgggaagtat 21637734  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 82 - 153
Target Start/End: Original strand, 722504 - 722575
Alignment:
Q  82 atactcaagagttaagttattttaattaacattaattgggaagtattggggcagatattggtgcatgataat 153  Q
    |||| |||||||||||||| |||| |||||||||| ||| |||||| ||||| ||||| |||| | ||||||    
T  722504 atacacaagagttaagttagtttagttaacattaaatggtaagtatcggggcggatatcggtgtaggataat 722575  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 159 - 189
Target Start/End: Complemental strand, 4400566 - 4400536
Alignment:
Q  159 gatactctcctgatacgtatcgggaagtatc 189  Q
    |||||||||||||||||||||||||||||||    
T  4400566 gatactctcctgatacgtatcgggaagtatc 4400536  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 83 - 117
Target Start/End: Complemental strand, 24784615 - 24784581
Alignment:
Q  83 tactcaagagttaagttattttaattaacattaat 117  Q
    ||||||||||||||||||||||| |||||||||||    
T  24784615 tactcaagagttaagttattttagttaacattaat 24784581  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 83 - 117
Target Start/End: Original strand, 24823651 - 24823685
Alignment:
Q  83 tactcaagagttaagttattttaattaacattaat 117  Q
    ||||||||||||||||||||||| |||||||||||    
T  24823651 tactcaagagttaagttattttagttaacattaat 24823685  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 17 - 55
Target Start/End: Original strand, 30683469 - 30683507
Alignment:
Q  17 tgttatactatatccaaaaggaacattgttagtgttata 55  Q
    ||||||||||||| |||||||||||||||||||| ||||    
T  30683469 tgttatactatattcaaaaggaacattgttagtgctata 30683507  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 159 - 189
Target Start/End: Complemental strand, 40694168 - 40694138
Alignment:
Q  159 gatactctcctgatacgtatcgggaagtatc 189  Q
    |||||||||||||||||||||||||||||||    
T  40694168 gatactctcctgatacgtatcgggaagtatc 40694138  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 83 - 117
Target Start/End: Complemental strand, 52721597 - 52721563
Alignment:
Q  83 tactcaagagttaagttattttaattaacattaat 117  Q
    ||||||||||||||||||||||| |||||||||||    
T  52721597 tactcaagagttaagttattttagttaacattaat 52721563  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #52
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 158 - 191
Target Start/End: Original strand, 5325740 - 5325773
Alignment:
Q  158 ggatactctcctgatacgtatcgggaagtatcgg 191  Q
    ||||||||||| ||||||||||||||||||||||    
T  5325740 ggatactctccagatacgtatcgggaagtatcgg 5325773  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #53
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 27 - 84
Target Start/End: Complemental strand, 14795841 - 14795785
Alignment:
Q  27 tatccaaaaggaacattgttagtgttatattatatcgatccaaaaaggaagcactata 84  Q
    |||||||||||||| ||||||||| |||| ||||||||||| |||| ||| |||||||    
T  14795841 tatccaaaaggaac-ttgttagtgctatactatatcgatccgaaaaagaatcactata 14795785  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #54
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 158 - 191
Target Start/End: Complemental strand, 19738796 - 19738763
Alignment:
Q  158 ggatactctcctgatacgtatcgggaagtatcgg 191  Q
    ||||||||||| ||||||||||||||||||||||    
T  19738796 ggatactctccggatacgtatcgggaagtatcgg 19738763  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #55
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 158 - 191
Target Start/End: Original strand, 52122888 - 52122921
Alignment:
Q  158 ggatactctcctgatacgtatcgggaagtatcgg 191  Q
    ||||||||||| ||||||||||||||||||||||    
T  52122888 ggatactctccggatacgtatcgggaagtatcgg 52122921  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #56
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 207 - 239
Target Start/End: Complemental strand, 21637783 - 21637751
Alignment:
Q  207 aaaataaaatttaatcttcggatactcttctga 239  Q
    |||||||||||||||||||||||||||| ||||    
T  21637783 aaaataaaatttaatcttcggatactctcctga 21637751  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #57
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 156 - 192
Target Start/End: Complemental strand, 39957665 - 39957629
Alignment:
Q  156 tcggatactctcctgatacgtatcgggaagtatcgga 192  Q
    ||||||||||||| ||||||||||| |||||||||||    
T  39957665 tcggatactctccggatacgtatcgagaagtatcgga 39957629  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #58
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 158 - 190
Target Start/End: Complemental strand, 53322436 - 53322404
Alignment:
Q  158 ggatactctcctgatacgtatcgggaagtatcg 190  Q
    ||||||||||| |||||||||||||||||||||    
T  53322436 ggatactctccggatacgtatcgggaagtatcg 53322404  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 144; Significance: 8e-76; HSPs: 70)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 144; E-Value: 8e-76
Query Start/End: Original strand, 11 - 237
Target Start/End: Original strand, 23969929 - 23970156
Alignment:
Q  11 cataggtgttatactatatccaaaaggaacattgttagtgttatattatatcgatccaaaaaggaagcactatactcaagagttaagttattttaattaa 110  Q
    |||| ||| ||||||||||||||||||||||||||||||| |||| |||||||||||||||| |||||||||||||||||||||||||||||||||||||    
T  23969929 cataagtgctatactatatccaaaaggaacattgttagtgctatactatatcgatccaaaaaagaagcactatactcaagagttaagttattttaattaa 23970028  T
Q  111 cattaattgggaagtattggggcagatattggtgcatgataattatcggatactctcctgatacgtatcgggaagtatcggataatta-nnnnnnnnaaa 209  Q
    ||||||||| |||||||| |||||  |||||||||| |||||||||||||||||||||||||||||||||| ||||||||| ||||||         |||    
T  23970029 cattaattgagaagtattagggcatgtattggtgcaggataattatcggatactctcctgatacgtatcggaaagtatcgggtaattattttttaagaaa 23970128  T
Q  210 ataaaatttaatcttcggatactcttct 237  Q
    |||||||||||||||| |||||||||||    
T  23970129 ataaaatttaatcttcagatactcttct 23970156  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 138; E-Value: 3e-72
Query Start/End: Original strand, 11 - 239
Target Start/End: Original strand, 554693 - 554922
Alignment:
Q  11 cataggtgttatactatatccaaaaggaacattgttagtgttatattatatcgatccaaaaaggaagcactatactcaagagttaagttattttaattaa 110  Q
    |||| ||| ||||||||||| |||||  ||||||||||||||||| |||||||||||||||| |||||||||||||||||||||||||||||||| ||||    
T  554693 cataagtgatatactatatctaaaagatacattgttagtgttatactatatcgatccaaaaaagaagcactatactcaagagttaagttattttagttaa 554792  T
Q  111 cattaattgggaagtattggggcagatattggtgcatgataattatcggatactctcctgatacgtatcgggaagtatcggataatta-nnnnnnnnaaa 209  Q
    |||| |||||||||||||||||||| ||| |||||| ||||||||||||||||||||||||||| |||||||||||||||||||||||         |||    
T  554793 cattgattgggaagtattggggcaggtatcggtgcaggataattatcggatactctcctgatacttatcgggaagtatcggataattatttttaaaaaaa 554892  T
Q  210 ataaaatttaatcttcggatactcttctga 239  Q
    ||||||||||||||||| ||||||| ||||    
T  554893 ataaaatttaatcttcgaatactctcctga 554922  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 127; E-Value: 1e-65
Query Start/End: Original strand, 11 - 181
Target Start/End: Complemental strand, 48153857 - 48153687
Alignment:
Q  11 cataggtgttatactatatccaaaaggaacattgttagtgttatattatatcgatccaaaaaggaagcactatactcaagagttaagttattttaattaa 110  Q
    |||| ||| ||||||||||||||||||||||||||||||| |||| |||||||||||||||| |||||||||||||||||||||||||||||||||||||    
T  48153857 cataagtgctatactatatccaaaaggaacattgttagtgctatactatatcgatccaaaaaagaagcactatactcaagagttaagttattttaattaa 48153758  T
Q  111 cattaattgggaagtattggggcagatattggtgcatgataattatcggatactctcctgatacgtatcgg 181  Q
    ||||||||||||||||||||||||| |||||||||| ||||||||||| |||||||   ||||||||||||    
T  48153757 cattaattgggaagtattggggcaggtattggtgcaagataattatcgaatactctttggatacgtatcgg 48153687  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 125; E-Value: 2e-64
Query Start/End: Original strand, 11 - 239
Target Start/End: Complemental strand, 21409702 - 21409474
Alignment:
Q  11 cataggtgttatactatatccaaaaggaacattgttagtgttatattatatcgatccaaaaaggaagcactatactcaagagttaagttattttaattaa 110  Q
    |||| ||| ||||||||||||||||| || |||||||||| |||| |||||||||||||||| |||||| ||||||||||||||||||||||||| ||||    
T  21409702 cataagtgctatactatatccaaaagaaatattgttagtgctatactatatcgatccaaaaaagaagcattatactcaagagttaagttattttagttaa 21409603  T
Q  111 cattaattgggaagtattggggcagatattggtgcatgataattatcggatactctcctgatacgtatcgggaagtatcggataattannnnnnnnaaaa 210  Q
    |||||||||| |||||||||||||| ||| |||| | |||||||||| ||||||||||||||||||||  ||||||||| ||||||||        ||||    
T  21409602 cattaattggaaagtattggggcaggtatcggtgtaggataattatcagatactctcctgatacgtattaggaagtatccgataattatttttaaaaaaa 21409503  T
Q  211 taaaatttaatcttcggatactcttctga 239  Q
    |||||||||||||| ||||||||| ||||    
T  21409502 taaaatttaatctttggatactctcctga 21409474  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 125; E-Value: 2e-64
Query Start/End: Original strand, 11 - 239
Target Start/End: Complemental strand, 26973369 - 26973136
Alignment:
Q  11 cataggtgttatactatatccaaaaggaacattgttagtgttatattatatcgatccaaaaaggaagcactatactcaagagttaagttattttaattaa 110  Q
    |||| ||||| ||||||||||||||| ||||||||||||| |||| |||||||||||||||| ||||||||||||||||||||||| ||||||||  |||    
T  26973369 cataagtgttgtactatatccaaaagaaacattgttagtgctatactatatcgatccaaaaaagaagcactatactcaagagttaaattattttatataa 26973270  T
Q  111 cattaattgggaagtattggggcagatattggtgcatgataattatcggatactc----tcctgatacgtatcgggaagtatcggataatta-nnnnnnn 205  Q
    | |||||||| || ||||||||||||||| ||||||||||||||||||||||||     |||||||||||||||||||||||||||||||||            
T  26973269 cgttaattggaaattattggggcagatataggtgcatgataattatcggatacttaatttcctgatacgtatcgggaagtatcggataattatttaaaaa 26973170  T
Q  206 naaaataaaatttaatcttcggatactcttctga 239  Q
     |||| ||||||||||||||||||||||||||||    
T  26973169 aaaaaaaaaatttaatcttcggatactcttctga 26973136  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 112; E-Value: 1e-56
Query Start/End: Original strand, 29 - 234
Target Start/End: Complemental strand, 24956543 - 24956339
Alignment:
Q  29 tccaaaaggaacattgttagtgttatattatatcgatccaaaaaggaagcactatactcaagagttaagttattttaattaacattaattgggaagtatt 128  Q
    |||||||| ||||||||||||| |||| |||||||||||||||  |||||| ||||||||||||||||||||||||| ||||||||||||||||||||||    
T  24956543 tccaaaagaaacattgttagtgctatactatatcgatccaaaa--gaagcattatactcaagagttaagttattttagttaacattaattgggaagtatt 24956446  T
Q  129 ggggcagatattggtgcatgataattatcggatactctcctgatacgtatcgggaagtatcggataatta-nnnnnnnnaaaataaaatttaatcttcgg 227  Q
    | ||||| ||| |||||| |||||||||| ||||||||| ||||||||||  ||||||||||||||||||         |||||||||||||||||||||    
T  24956445 gtggcaggtatcggtgcaggataattatcagatactctcttgatacgtattaggaagtatcggataattatttttctttaaaataaaatttaatcttcgg 24956346  T
Q  228 atactct 234  Q
    |||||||    
T  24956345 atactct 24956339  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 90; E-Value: 1e-43
Query Start/End: Original strand, 83 - 239
Target Start/End: Complemental strand, 21180076 - 21179919
Alignment:
Q  83 tactcaagagttaagttattttaattaacattaattgggaagtattggggcagatattggtgcatgataattatcggatactctcctgatacgtatcggg 182  Q
    ||||||||||||||||||||||| ||| |||||  |||||| ||||||||||| ||||| ||||||||||||||| ||||||||||||||||||||||||    
T  21180076 tactcaagagttaagttattttagttatcattagctgggaaatattggggcaggtattgatgcatgataattatcagatactctcctgatacgtatcggg 21179977  T
Q  183 aagtatcggataatta-nnnnnnnnaaaataaaatttaatcttcggatactcttctga 239  Q
    ||||||||||||||||         |||||||||||||||||||||||||||| ||||    
T  21179976 aagtatcggataattattattttttaaaataaaatttaatcttcggatactctcctga 21179919  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 89; E-Value: 5e-43
Query Start/End: Original strand, 83 - 239
Target Start/End: Complemental strand, 40041618 - 40041462
Alignment:
Q  83 tactcaagagttaagttattttaattaacattaattgggaagtattggggcagatattggtgcatgataattatcggatactctcctgatacgtatcggg 182  Q
    ||||||| |||||| |||||||| ||||||||||||||||| ||| ||||||| |||  ||||| |||||||||||||||||||||||||||||||||||    
T  40041618 tactcaatagttaaattattttagttaacattaattgggaaatatcggggcaggtatcagtgcaggataattatcggatactctcctgatacgtatcggg 40041519  T
Q  183 aagtatcggataattannnnnnnnaaaataaaatttaatcttcggatactcttctga 239  Q
    || |||||||||||||        |||||||||||||||||||||||||||| ||||    
T  40041518 aaatatcggataattattttttttaaaataaaatttaatcttcggatactctcctga 40041462  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 88; E-Value: 2e-42
Query Start/End: Original strand, 15 - 134
Target Start/End: Complemental strand, 36413677 - 36413559
Alignment:
Q  15 ggtgttatactatatccaaaaggaacattgttagtgttatattatatcgatccaaaaaggaagcactatactcaagagttaagttattttaattaacatt 114  Q
    ||||||||||||||||||||||||||||||||||||||||| ||||||||| |||||| |||||||||||||||||||||||||||||||| | |||| |    
T  36413677 ggtgttatactatatccaaaaggaacattgttagtgttatactatatcgat-caaaaaagaagcactatactcaagagttaagttattttagtaaacagt 36413579  T
Q  115 aattgggaagtattggggca 134  Q
    |||||| |||||||||||||    
T  36413578 aattggaaagtattggggca 36413559  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 84; E-Value: 5e-40
Query Start/End: Original strand, 83 - 198
Target Start/End: Original strand, 36757891 - 36758006
Alignment:
Q  83 tactcaagagttaagttattttaattaacattaattgggaagtattggggcagatattggtgcatgataattatcggatactctcctgatacgtatcggg 182  Q
    ||||||||||||||||||||||| |||||||||||||||||||||  ||||||||||  ||| | |||||||||||||||||||||||||||||||||||    
T  36757891 tactcaagagttaagttattttagttaacattaattgggaagtatcagggcagatatcagtgaaagataattatcggatactctcctgatacgtatcggg 36757990  T
Q  183 aagtatcggataatta 198  Q
    |||||| |||||||||    
T  36757991 aagtattggataatta 36758006  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 84; E-Value: 5e-40
Query Start/End: Original strand, 83 - 198
Target Start/End: Original strand, 36767415 - 36767530
Alignment:
Q  83 tactcaagagttaagttattttaattaacattaattgggaagtattggggcagatattggtgcatgataattatcggatactctcctgatacgtatcggg 182  Q
    ||||||||||||||||||||||| |||||||||||||||||||||  ||||||||||  ||| | |||||||||||||||||||||||||||||||||||    
T  36767415 tactcaagagttaagttattttagttaacattaattgggaagtatcagggcagatatcagtgaaagataattatcggatactctcctgatacgtatcggg 36767514  T
Q  183 aagtatcggataatta 198  Q
    |||||| |||||||||    
T  36767515 aagtattggataatta 36767530  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 81; E-Value: 3e-38
Query Start/End: Original strand, 82 - 198
Target Start/End: Original strand, 1400142 - 1400258
Alignment:
Q  82 atactcaagagttaagttattttaattaacattaattgggaagtattggggcagatattggtgcatgataattatcggatactctcctgatacgtatcgg 181  Q
    ||||| |||||||||||||||||||||||||||||||||||||||| ||||||||||   ||| | |||||| |||||||||||||||||||||||||||    
T  1400142 atacttaagagttaagttattttaattaacattaattgggaagtatcggggcagatacatgtgtaggataatgatcggatactctcctgatacgtatcgg 1400241  T
Q  182 gaagtatcggataatta 198  Q
    |||||||| ||||||||    
T  1400242 gaagtatcagataatta 1400258  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 74; E-Value: 5e-34
Query Start/End: Original strand, 82 - 191
Target Start/End: Original strand, 15878298 - 15878407
Alignment:
Q  82 atactcaagagttaagttattttaattaacattaattgggaagtattggggcagatattggtgcatgataattatcggatactctcctgatacgtatcgg 181  Q
    |||||||||||||||||||||||| |||| |||||||||||||||| ||||||||||  |||| | |||||| |||||||||||||||||||||||||||    
T  15878298 atactcaagagttaagttattttagttaatattaattgggaagtatcggggcagataccggtgtaggataatgatcggatactctcctgatacgtatcgg 15878397  T
Q  182 gaagtatcgg 191  Q
     |||||||||    
T  15878398 aaagtatcgg 15878407  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 83 - 191
Target Start/End: Original strand, 23078984 - 23079092
Alignment:
Q  83 tactcaagagttaagttattttaattaacattaattgggaagtattggggcagatattggtgcatgataattatcggatactctcctgatacgtatcggg 182  Q
    |||| |||||||||||||||||||||||||||||||||||| ||| ||| ||| ||| ||| || ||||| |||||||||||||||||||||||||||||    
T  23078984 tacttaagagttaagttattttaattaacattaattgggaaatatcgggacaggtatcggtacaggataactatcggatactctcctgatacgtatcggg 23079083  T
Q  183 aagtatcgg 191  Q
    |||||||||    
T  23079084 aagtatcgg 23079092  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 83 - 239
Target Start/End: Complemental strand, 35160104 - 35159948
Alignment:
Q  83 tactcaagagttaagttattttaattaacattaattgggaagtattggggcagatattggtgcatgataattatcggatactctcctgatacgtatcggg 182  Q
    |||||||||||||| |||||||||||||||||||||| ||||||| |||||||||||  ||| | ||| ||||||||||||||| |||||| ||||||||    
T  35160104 tactcaagagttaaattattttaattaacattaattgagaagtatcggggcagatatcagtgaaagat-attatcggatactcttctgatatgtatcggg 35160006  T
Q  183 aagtatcggataatta-nnnnnnnnaaaataaaatttaatcttcggatactcttctga 239  Q
    || |||| ||||||||         |||||||||||||||||||||||||||| ||||    
T  35160005 aactatcagataattatttttttttaaaataaaatttaatcttcggatactctcctga 35159948  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 83 - 176
Target Start/End: Original strand, 36763671 - 36763764
Alignment:
Q  83 tactcaagagttaagttattttaattaacattaattgggaagtattggggcagatattggtgcatgataattatcggatactctcctgatacgt 176  Q
    ||||||||||||||||||||||| ||||||||||||||||||||| |||||||||||  ||| | |||||||||||||||||||||||||||||    
T  36763671 tactcaagagttaagttattttagttaacattaattgggaagtatcggggcagatatcagtgaaagataattatcggatactctcctgatacgt 36763764  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 83 - 239
Target Start/End: Original strand, 44960010 - 44960167
Alignment:
Q  83 tactcaagagttaagttattttaattaacattaattgggaagtattggggcagatattggtgcatgataattatcggatactctcctgatacgtatcggg 182  Q
    ||||||||||||||||||||||| ||||||||||||||||| ||  |||| || |||  |||||  ||||||||||||||||| ||||||| ||||||||    
T  44960010 tactcaagagttaagttattttagttaacattaattgggaaataccggggtaggtatcagtgcagaataattatcggatactcccctgatatgtatcggg 44960109  T
Q  183 aagtatcggataatta-nnnnnnnnaaaataaaatttaatcttcggatactcttctga 239  Q
    ||||||| ||||||||         |||||||||||||||||| ||||||||||||||    
T  44960110 aagtatccgataattatttttacaaaaaataaaatttaatctttggatactcttctga 44960167  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 17 - 84
Target Start/End: Complemental strand, 19510956 - 19510889
Alignment:
Q  17 tgttatactatatccaaaaggaacattgttagtgttatattatatcgatccaaaaaggaagcactata 84  Q
    |||||||||||||||||||||||||||| |||||||||||||||||||||||| || |||||||||||    
T  19510956 tgttatactatatccaaaaggaacattgctagtgttatattatatcgatccaagaaagaagcactata 19510889  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 17 - 239
Target Start/End: Complemental strand, 44270048 - 44269808
Alignment:
Q  17 tgttatactatatccaaaaggaacattgttagtgttatattatatcgatccaaaaaggaagcactatactcaa------------------gagttaagt 98  Q
    ||||||||||||||||||||||||||||||||||||||| |||||||||  ||||| ||||||| ||| ||||                  |||||||||    
T  44270048 tgttatactatatccaaaaggaacattgttagtgttatactatatcgataaaaaaaagaagcaccata-tcaaaaaaaaaaatacatgggtgagttaagt 44269950  T
Q  99 tattttaattaacattaattgggaagtattggggcagatattggtgcatgataattatcggatactctcctgatacgtatcgggaagtatcggataatta 198  Q
    ||||||| |||||||| |||| ||| ||| | ||||||||| | || |  ||||||||| |||||| || ||||||||||||||||||||||| ||||||    
T  44269949 tattttagttaacatttattgtgaaatatcgaggcagatatcgatgtagaataattatcagatactttcttgatacgtatcgggaagtatcggttaatta 44269850  T
Q  199 nnnnnnnnaaaa-taaaatttaatcttcggatactcttctga 239  Q
            |||| ||||||||||||||| |||||||| ||||    
T  44269849 tttttttaaaaattaaaatttaatcttcagatactctactga 44269808  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 20 - 84
Target Start/End: Complemental strand, 38064996 - 38064931
Alignment:
Q  20 tatactatatccaaaaggaacattgttagtgttatattatatcgatcca-aaaaggaagcactata 84  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||| |||| |||||||||||    
T  38064996 tatactatatccaaaaggaacattgttagtgttatattatatcgatccaaaaaaagaagcactata 38064931  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 20 - 84
Target Start/End: Original strand, 1042858 - 1042922
Alignment:
Q  20 tatactatatccaaaaggaacattgttagtgttatattatatcgatccaaaaaggaagcactata 84  Q
    |||| ||||||||||||||||||||||||||||||| |||||||||||||||| |||||||||||    
T  1042858 tatattatatccaaaaggaacattgttagtgttatactatatcgatccaaaaaagaagcactata 1042922  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 17 - 84
Target Start/End: Original strand, 1400055 - 1400122
Alignment:
Q  17 tgttatactatatccaaaaggaacattgttagtgttatattatatcgatccaaaaaggaagcactata 84  Q
    ||||||||||||||||||||||||||||||||||||||| |||||||||| ||||| ||| |||||||    
T  1400055 tgttatactatatccaaaaggaacattgttagtgttatactatatcgatctaaaaaagaaacactata 1400122  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 83 - 232
Target Start/End: Complemental strand, 33454310 - 33454160
Alignment:
Q  83 tactcaagagttaagttattttaattaacattaattgggaagtattggggcagatattggtgcatgataattatcggatactctcctgatacgtatcggg 182  Q
    ||||||||||||||||| ||||| | ||||||||||||||| ||| ||||||  ||| |||| | ||||||||||| ||||||| || ||| |||| |||    
T  33454310 tactcaagagttaagtttttttagtcaacattaattgggaaatatcggggcaagtatcggtgtaggataattatcgaatactcttctaataagtattggg 33454211  T
Q  183 aagtatcggataatta-nnnnnnnnaaaataaaatttaatcttcggatact 232  Q
    ||||||| | ||||||         ||||||||||||||||||||||||||    
T  33454210 aagtatcagctaattatttttttaaaaaataaaatttaatcttcggatact 33454160  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 83 - 234
Target Start/End: Complemental strand, 38064906 - 38064753
Alignment:
Q  83 tactcaagagttaagttattttaatt-aacattaattgggaagtattggggcagatattggtgcatgataattatcggatactctcctgatacgtatcgg 181  Q
    ||||||| ||||||||||||||| || || |||||||||||| ||  |||| || |||||||||| |||||||||| ||||| |||| ||||||||| ||    
T  38064906 tactcaaaagttaagttattttagtttaatattaattgggaaataacggggtaggtattggtgcaggataattatcagataccctccagatacgtattgg 38064807  T
Q  182 gaagtatcggataa-ttannnnnnnnaaaataaaatttaatcttcggatactct 234  Q
    ||| |||| ||||| ||         ||||||||||||||||||||||||||||    
T  38064806 gaaatatctgataatttttattttaaaaaataaaatttaatcttcggatactct 38064753  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 16 - 84
Target Start/End: Original strand, 15878210 - 15878278
Alignment:
Q  16 gtgttatactatatccaaaaggaacattgttagtgttatattatatcgatccaaaaaggaagcactata 84  Q
    |||||||||||||||||||| ||||||||||||||||||| |||||||||| ||||| ||| |||||||    
T  15878210 gtgttatactatatccaaaatgaacattgttagtgttatactatatcgatctaaaaaagaaacactata 15878278  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 20 - 84
Target Start/End: Original strand, 16564031 - 16564095
Alignment:
Q  20 tatactatatccaaaaggaacattgttagtgttatattatatcgatccaaaaaggaagcactata 84  Q
    |||||||||||||||||||||||||||| || |||| |||||||||||||||| |||||||||||    
T  16564031 tatactatatccaaaaggaacattgttaatgctatactatatcgatccaaaaaagaagcactata 16564095  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 20 - 84
Target Start/End: Complemental strand, 16601631 - 16601567
Alignment:
Q  20 tatactatatccaaaaggaacattgttagtgttatattatatcgatccaaaaaggaagcactata 84  Q
    |||||||||||||||||||||||||||| || |||| |||||||||||||||| |||||||||||    
T  16601631 tatactatatccaaaaggaacattgttaatgctatactatatcgatccaaaaaagaagcactata 16601567  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 20 - 84
Target Start/End: Original strand, 23078899 - 23078963
Alignment:
Q  20 tatactatatccaaaaggaacattgttagtgttatattatatcgatccaaaaaggaagcactata 84  Q
    ||||||||||| ||||||||||||||||||| |||| |||||||||||||||| |||||||||||    
T  23078899 tatactatatcaaaaaggaacattgttagtgctatactatatcgatccaaaaaagaagcactata 23078963  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 20 - 84
Target Start/End: Complemental strand, 33454395 - 33454331
Alignment:
Q  20 tatactatatccaaaaggaacattgttagtgttatattatatcgatccaaaaaggaagcactata 84  Q
    |||| ||||||||||| ||||||||||||||||||| |||||||||||||||| |||||||||||    
T  33454395 tatattatatccaaaatgaacattgttagtgttatactatatcgatccaaaaaagaagcactata 33454331  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 20 - 82
Target Start/End: Complemental strand, 4291998 - 4291937
Alignment:
Q  20 tatactatatccaaaaggaacattgttagtgttatattatatcgatccaaaaaggaagcacta 82  Q
    |||||||||||||||||||||||||||| ||||||| |||||||||||||||| |||||||||    
T  4291998 tatactatatccaaaaggaacattgttaatgttatactatatcgatccaaaaa-gaagcacta 4291937  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 19 - 84
Target Start/End: Original strand, 19820787 - 19820852
Alignment:
Q  19 ttatactatatccaaaaggaacattgttagtgttatattatatcgatccaaaaaggaagcactata 84  Q
    |||||||||||||||||||||||||||||||| |||| ||||||||| | |||| |||||||||||    
T  19820787 ttatactatatccaaaaggaacattgttagtgctatactatatcgattcgaaaaagaagcactata 19820852  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 20 - 84
Target Start/End: Original strand, 26773371 - 26773435
Alignment:
Q  20 tatactatatccaaaaggaacattgttagtgttatattatatcgatccaaaaaggaagcactata 84  Q
    ||||||||||||||| ||||||||||||||| |||| |||||||||||||||| |||||| ||||    
T  26773371 tatactatatccaaacggaacattgttagtgctatactatatcgatccaaaaaagaagcattata 26773435  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 23 - 84
Target Start/End: Complemental strand, 27354278 - 27354218
Alignment:
Q  23 actatatccaaaaggaacattgttagtgttatattatatcgatccaaaaaggaagcactata 84  Q
    |||||||||||||||||| ||||||||| ||||||||||||||||||||| ||| |||||||    
T  27354278 actatatccaaaaggaac-ttgttagtgctatattatatcgatccaaaaaagaatcactata 27354218  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 23 - 84
Target Start/End: Original strand, 27555127 - 27555187
Alignment:
Q  23 actatatccaaaaggaacattgttagtgttatattatatcgatccaaaaaggaagcactata 84  Q
    |||||||||||||||||| |||||||||||||| |||||||||||||||| ||| |||||||    
T  27555127 actatatccaaaaggaac-ttgttagtgttatactatatcgatccaaaaaagaatcactata 27555187  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 20 - 84
Target Start/End: Original strand, 9250101 - 9250165
Alignment:
Q  20 tatactatatccaaaaggaacattgttagtgttatattatatcgatccaaaaaggaagcactata 84  Q
    |||||||||| ||||| ||||||||||||||||||| |||||||||| |||||  ||||||||||    
T  9250101 tatactatattcaaaaagaacattgttagtgttatactatatcgatctaaaaaataagcactata 9250165  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 20 - 84
Target Start/End: Original strand, 9283651 - 9283715
Alignment:
Q  20 tatactatatccaaaaggaacattgttagtgttatattatatcgatccaaaaaggaagcactata 84  Q
    |||||||||| ||||| ||||||||||||||||||| |||||||||| |||||  ||||||||||    
T  9283651 tatactatattcaaaaagaacattgttagtgttatactatatcgatctaaaaaataagcactata 9283715  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 20 - 84
Target Start/End: Complemental strand, 25969832 - 25969768
Alignment:
Q  20 tatactatatccaaaaggaacattgttagtgttatattatatcgatccaaaaaggaagcactata 84  Q
    |||||||||| ||||| ||||||||||||||||||| |||||||||| |||||  ||||||||||    
T  25969832 tatactatattcaaaaagaacattgttagtgttatactatatcgatctaaaaaataagcactata 25969768  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 20 - 84
Target Start/End: Original strand, 36757802 - 36757870
Alignment:
Q  20 tatactatatccaaaaggaacattgtt----agtgttatattatatcgatccaaaaaggaagcactata 84  Q
    |||||||||||||||||||||||||||    ||||||||| ||||||||||||||||  ||||||||||    
T  36757802 tatactatatccaaaaggaacattgttaatcagtgttatactatatcgatccaaaaaataagcactata 36757870  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 20 - 84
Target Start/End: Original strand, 36763581 - 36763649
Alignment:
Q  20 tatactatatccaaaaggaacattg----ttagtgttatattatatcgatccaaaaaggaagcactata 84  Q
    |||||||||||||||||||||||||    ||||||||||| |||||||||||||||| || ||||||||    
T  36763581 tatactatatccaaaaggaacattgttaattagtgttatactatatcgatccaaaaaagaggcactata 36763649  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 20 - 84
Target Start/End: Original strand, 36767326 - 36767394
Alignment:
Q  20 tatactatatccaaaaggaacattgtt----agtgttatattatatcgatccaaaaaggaagcactata 84  Q
    |||||||||||||||||||||||||||    ||||||||| ||||||||||||||||  ||||||||||    
T  36767326 tatactatatccaaaaggaacattgttaatcagtgttatactatatcgatccaaaaaataagcactata 36767394  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 20 - 83
Target Start/End: Complemental strand, 35160191 - 35160124
Alignment:
Q  20 tatactatatccaaaaggaacattg----ttagtgttatattatatcgatccaaaaaggaagcactat 83  Q
    |||||||||||||||||||||||||    |||||| |||| |||||||||||||||| ||||||||||    
T  35160191 tatactatatccaaaaggaacattgttaattagtgctatactatatcgatccaaaaaagaagcactat 35160124  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 23 - 81
Target Start/End: Complemental strand, 36661301 - 36661244
Alignment:
Q  23 actatatccaaaaggaacattgttagtgttatattatatcgatccaaaaaggaagcact 81  Q
    |||||||||||||||||| |||||||||||||| | |||||||||||||| ||||||||    
T  36661301 actatatccaaaaggaac-ttgttagtgttatactttatcgatccaaaaaagaagcact 36661244  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 23 - 84
Target Start/End: Complemental strand, 48163765 - 48163705
Alignment:
Q  23 actatatccaaaaggaacattgttagtgttatattatatcgatccaaaaaggaagcactata 84  Q
    |||||||||||||||||| ||||||||| |||| |||||||||||||||| ||| |||||||    
T  48163765 actatatccaaaaggaac-ttgttagtgctatactatatcgatccaaaaaagaatcactata 48163705  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 20 - 84
Target Start/End: Complemental strand, 8029137 - 8029073
Alignment:
Q  20 tatactatatccaaaaggaacattgttagtgttatattatatcgatccaaaaaggaagcactata 84  Q
    ||||||||||| ||||| ||||||||||||| |||| ||||||||| |||||| |||| ||||||    
T  8029137 tatactatatctaaaagaaacattgttagtgctatagtatatcgattcaaaaaagaagtactata 8029073  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 25 - 84
Target Start/End: Complemental strand, 11830523 - 11830465
Alignment:
Q  25 tatatccaaaaggaacattgttagtgttatattatatcgatccaaaaaggaagcactata 84  Q
    |||||||||||||||| ||||||||| |||| |||||||||||||||| |||||| ||||    
T  11830523 tatatccaaaaggaac-ttgttagtgctatactatatcgatccaaaaaagaagcattata 11830465  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 156 - 198
Target Start/End: Original strand, 19820881 - 19820923
Alignment:
Q  156 tcggatactctcctgatacgtatcgggaagtatcggataatta 198  Q
    ||||||||||||||||||| |||||| ||||||||||||||||    
T  19820881 tcggatactctcctgatacatatcggaaagtatcggataatta 19820923  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #47
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 23 - 84
Target Start/End: Complemental strand, 16851140 - 16851080
Alignment:
Q  23 actatatccaaaaggaacattgttagtgttatattatatcgatccaaaaaggaagcactata 84  Q
    |||||||||||||| ||| ||||||||| |||| |||||||||||||||| ||| |||||||    
T  16851140 actatatccaaaagaaac-ttgttagtgatatactatatcgatccaaaaaagaatcactata 16851080  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #48
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 23 - 84
Target Start/End: Original strand, 27397399 - 27397459
Alignment:
Q  23 actatatccaaaaggaacattgttagtgttatattatatcgatccaaaaaggaagcactata 84  Q
    ||||||| |||||||||| ||||||||| |||| |||||||||||||||| |||||| ||||    
T  27397399 actatattcaaaaggaac-ttgttagtgctataatatatcgatccaaaaaagaagcattata 27397459  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #49
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 23 - 84
Target Start/End: Original strand, 47238031 - 47238092
Alignment:
Q  23 actatatccaaaaggaacattgttagtgttatattatatcgatccaaaaaggaagcactata 84  Q
    |||| |||||||||| ||||||||| || |||| ||||||||| |||||| |||||||||||    
T  47238031 actacatccaaaagggacattgttaatgctatactatatcgattcaaaaaagaagcactata 47238092  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #50
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 156 - 188
Target Start/End: Complemental strand, 35159963 - 35159931
Alignment:
Q  156 tcggatactctcctgatacgtatcgggaagtat 188  Q
    |||||||||||||||||||||||||||||||||    
T  35159963 tcggatactctcctgatacgtatcgggaagtat 35159931  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #51
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 156 - 191
Target Start/End: Complemental strand, 38064693 - 38064658
Alignment:
Q  156 tcggatactctcctgatacgtatcgggaagtatcgg 191  Q
    |||||||||||||||||||||||||| |||||||||    
T  38064693 tcggatactctcctgatacgtatcggaaagtatcgg 38064658  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #52
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 158 - 192
Target Start/End: Original strand, 27555388 - 27555422
Alignment:
Q  158 ggatactctcctgatacgtatcgggaagtatcgga 192  Q
    ||||||||||| |||||||||||||||||||||||    
T  27555388 ggatactctccggatacgtatcgggaagtatcgga 27555422  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #53
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 207 - 237
Target Start/End: Original strand, 27688010 - 27688040
Alignment:
Q  207 aaaataaaatttaatcttcggatactcttct 237  Q
    |||||||||||||||||||||||||||||||    
T  27688010 aaaataaaatttaatcttcggatactcttct 27688040  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #54
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 83 - 117
Target Start/End: Original strand, 47719963 - 47719997
Alignment:
Q  83 tactcaagagttaagttattttaattaacattaat 117  Q
    ||||||||||||||||||||||| |||||||||||    
T  47719963 tactcaagagttaagttattttagttaacattaat 47719997  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #55
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 156 - 189
Target Start/End: Original strand, 1363029 - 1363062
Alignment:
Q  156 tcggatactctcctgatacgtatcgggaagtatc 189  Q
    ||||||||||||||||||||||||| ||||||||    
T  1363029 tcggatactctcctgatacgtatcgagaagtatc 1363062  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #56
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 158 - 191
Target Start/End: Original strand, 9250441 - 9250474
Alignment:
Q  158 ggatactctcctgatacgtatcgggaagtatcgg 191  Q
    ||||||||||| ||||||||||||||||||||||    
T  9250441 ggatactctccggatacgtatcgggaagtatcgg 9250474  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #57
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 156 - 189
Target Start/End: Complemental strand, 23311820 - 23311787
Alignment:
Q  156 tcggatactctcctgatacgtatcgggaagtatc 189  Q
    ||||||||||||||||||| ||||||||||||||    
T  23311820 tcggatactctcctgatacatatcgggaagtatc 23311787  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #58
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 158 - 191
Target Start/End: Complemental strand, 25969493 - 25969460
Alignment:
Q  158 ggatactctcctgatacgtatcgggaagtatcgg 191  Q
    ||||||||||| ||||||||||||||||||||||    
T  25969493 ggatactctccggatacgtatcgggaagtatcgg 25969460  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #59
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 158 - 191
Target Start/End: Complemental strand, 27354017 - 27353984
Alignment:
Q  158 ggatactctcctgatacgtatcgggaagtatcgg 191  Q
    ||||||||||| ||||||||||||||||||||||    
T  27354017 ggatactctccggatacgtatcgggaagtatcgg 27353984  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #60
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 158 - 191
Target Start/End: Original strand, 34122636 - 34122669
Alignment:
Q  158 ggatactctcctgatacgtatcgggaagtatcgg 191  Q
    ||||||||||| ||||||||||||||||||||||    
T  34122636 ggatactctccagatacgtatcgggaagtatcgg 34122669  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #61
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 158 - 191
Target Start/End: Complemental strand, 39520885 - 39520852
Alignment:
Q  158 ggatactctcctgatacgtatcgggaagtatcgg 191  Q
    ||||||||||| ||||||||||||||||||||||    
T  39520885 ggatactctccggatacgtatcgggaagtatcgg 39520852  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #62
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 23 - 72
Target Start/End: Complemental strand, 40096495 - 40096447
Alignment:
Q  23 actatatccaaaaggaacattgttagtgttatattatatcgatccaaaaa 72  Q
    ||||||||||||| |||| ||||||||| |||| ||||||||||||||||    
T  40096495 actatatccaaaatgaac-ttgttagtgatatactatatcgatccaaaaa 40096447  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #63
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 158 - 191
Target Start/End: Complemental strand, 42897087 - 42897054
Alignment:
Q  158 ggatactctcctgatacgtatcgggaagtatcgg 191  Q
    ||||||||||| ||||||||||||||||||||||    
T  42897087 ggatactctccggatacgtatcgggaagtatcgg 42897054  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #64
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 16 - 61
Target Start/End: Original strand, 44959123 - 44959168
Alignment:
Q  16 gtgttatactatatccaaaaggaacattgttagtgttatattatat 61  Q
    ||||| ||||||||||||||||||||||| ||||| |||| |||||    
T  44959123 gtgttgtactatatccaaaaggaacattgctagtgctatactatat 44959168  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #65
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 158 - 191
Target Start/End: Complemental strand, 48163504 - 48163471
Alignment:
Q  158 ggatactctcctgatacgtatcgggaagtatcgg 191  Q
    ||||||||||| ||||||||||||||||||||||    
T  48163504 ggatactctccggatacgtatcgggaagtatcgg 48163471  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #66
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 208 - 236
Target Start/End: Complemental strand, 3393102 - 3393074
Alignment:
Q  208 aaataaaatttaatcttcggatactcttc 236  Q
    |||||||||||||||||||||||||||||    
T  3393102 aaataaaatttaatcttcggatactcttc 3393074  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #67
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 207 - 239
Target Start/End: Complemental strand, 7416729 - 7416697
Alignment:
Q  207 aaaataaaatttaatcttcggatactcttctga 239  Q
    |||||||||||||||||||||||||||| ||||    
T  7416729 aaaataaaatttaatcttcggatactctcctga 7416697  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #68
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 87 - 119
Target Start/End: Complemental strand, 11058684 - 11058652
Alignment:
Q  87 caagagttaagttattttaattaacattaattg 119  Q
    ||||||||||||||||||| |||||||||||||    
T  11058684 caagagttaagttattttagttaacattaattg 11058652  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #69
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 207 - 239
Target Start/End: Complemental strand, 23311837 - 23311805
Alignment:
Q  207 aaaataaaatttaatcttcggatactcttctga 239  Q
    |||||||||||||||||||||||||||| ||||    
T  23311837 aaaataaaatttaatcttcggatactctcctga 23311805  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #70
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 208 - 236
Target Start/End: Complemental strand, 36891883 - 36891855
Alignment:
Q  208 aaataaaatttaatcttcggatactcttc 236  Q
    |||||||||||||||||||||||||||||    
T  36891883 aaataaaatttaatcttcggatactcttc 36891855  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 142; Significance: 1e-74; HSPs: 34)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 142; E-Value: 1e-74
Query Start/End: Original strand, 11 - 239
Target Start/End: Complemental strand, 19128468 - 19128239
Alignment:
Q  11 cataggtgttatactatatccaaaaggaacattgttagtgttatattatatcgatccaaaaaggaagcactatactcaagagttaagttattttaattaa 110  Q
    |||| ||||||||||||||||||||| ||||||||||||| |||| |||||||||||||||| |||||||||||||||||||||||||||||||| ||||    
T  19128468 cataagtgttatactatatccaaaagaaacattgttagtgctatactatatcgatccaaaaaagaagcactatactcaagagttaagttattttatttaa 19128369  T
Q  111 cattaattgggaagtattggggcagatattggtgcatgataattatcggatactctcctgatacgtatcgggaagtatcggataatta-nnnnnnnnaaa 209  Q
    | ||||||||||| ||| |||||||| || |||| | ||||||||||||||||| |||||||||||||||||||||||||||||||||         |||    
T  19128368 cgttaattgggaattatcggggcagacataggtgaaggataattatcggatactttcctgatacgtatcgggaagtatcggataattatttttaaaaaaa 19128269  T
Q  210 ataaaatttaatcttcggatactcttctga 239  Q
    ||||||||||||||||||||||||||||||    
T  19128268 ataaaatttaatcttcggatactcttctga 19128239  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 116; E-Value: 4e-59
Query Start/End: Original strand, 11 - 198
Target Start/End: Complemental strand, 234624 - 234437
Alignment:
Q  11 cataggtgttatactatatccaaaaggaacattgttagtgttatattatatcgatccaaaaaggaagcactatactcaagagttaagttattttaattaa 110  Q
    |||| ||||||||||||||||||||| |||||||| |||| |||| |||||||||||||||| |||||||||||||||||||||||||||||||| ||||    
T  234624 cataagtgttatactatatccaaaagaaacattgtcagtgctatactatatcgatccaaaaaagaagcactatactcaagagttaagttattttatttaa 234525  T
Q  111 cattaattgggaagtattggggcagatattggtgcatgataattatcggatactctcctgatacgtatcgggaagtatcggataatta 198  Q
    | |||||||| || ||||||||||| ||| | | || ||||||||||||||||| |||||| || |||||||||||||||||||||||    
T  234524 cgttaattggaaattattggggcaggtatagattcaagataattatcggatactttcctgaaacatatcgggaagtatcggataatta 234437  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 104; E-Value: 6e-52
Query Start/End: Original strand, 11 - 182
Target Start/End: Complemental strand, 27084289 - 27084118
Alignment:
Q  11 cataggtgttatactatatccaaaaggaacattgttagtgttatattatatcgatccaaaaaggaagcactatactcaagagttaagttattttaattaa 110  Q
    |||| |||||||||||||||| |||||||||||||||||  |||| ||||||||| |||||| |||||||||||||||||||||||||||||||| ||||    
T  27084289 cataagtgttatactatatccgaaaggaacattgttagttctatactatatcgattcaaaaaagaagcactatactcaagagttaagttattttagttaa 27084190  T
Q  111 cattaattgggaagtattggggcagatattggtgcatgataattatcggatactctcctgatacgtatcggg 182  Q
    ||||||||||||||||| ||||||| |||  |||||  ||||||||| |||| | |||||||||||||||||    
T  27084189 cattaattgggaagtatgggggcagttatcagtgcaaaataattatcagatattttcctgatacgtatcggg 27084118  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 84; E-Value: 5e-40
Query Start/End: Original strand, 83 - 239
Target Start/End: Complemental strand, 7255164 - 7255006
Alignment:
Q  83 tactcaagagttaagttattttaattaacattaattgggaagtattggggcagatattggtgcatgataattatcggatactctcctgatacgtatcggg 182  Q
    ||||||||||||||||||||| | |||||||||||||| || ||| ||||||| ||| ||||||||||| ||||||||||||||||||||||||||||||    
T  7255164 tactcaagagttaagttatttaagttaacattaattggaaaatatcggggcaggtatcggtgcatgatacttatcggatactctcctgatacgtatcggg 7255065  T
Q  183 aagtatcggataatta--nnnnnnnnaaaataaaatttaatcttcggatactcttctga 239  Q
    ||||||| ||||||||           ||||||||||||||||||||||||||||||||    
T  7255064 aagtatcagataattattattatttttaaataaaatttaatcttcggatactcttctga 7255006  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 20 - 198
Target Start/End: Original strand, 10894309 - 10894509
Alignment:
Q  20 tatactatatccaaaaggaacattgttagtgttatattatatcgatccaaaaaggaagcactata----------------------ctcaagagttaag 97  Q
    ||||||||||||||||||||||||||||||| |||| |||||||||||||||| |||||||||||                      ||| |||||||||    
T  10894309 tatactatatccaaaaggaacattgttagtgctatactatatcgatccaaaaaagaagcactatatccaacaaagaacacatcaatactcgagagttaag 10894408  T
Q  98 ttattttaattaacattaattgggaagtattggggcagatattggtgcatgataattatcggatactctcctgatacgtatcgggaagtatcggataatt 197  Q
    | |||||| ||||||||||||||||| ||| |||| || ||| |||||| |||||||||||||||||||||||||||||||  |||||||||| ||||||    
T  10894409 taattttagttaacattaattgggaaatatcggggtaggtatcggtgcaggataattatcggatactctcctgatacgtattaggaagtatcgaataatt 10894508  T
Q  198 a 198  Q
    |    
T  10894509 a 10894509  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 83 - 191
Target Start/End: Original strand, 13045251 - 13045359
Alignment:
Q  83 tactcaagagttaagttattttaattaacattaattgggaagtattggggcagatattggtgcatgataattatcggatactctcctgatacgtatcggg 182  Q
    ||||||||||||||||||||||| || |||||||||||||| ||||||||||||||| |||||| |||| ||||| |||| ||||||||||| |||| |     
T  13045251 tactcaagagttaagttattttagttgacattaattgggaaatattggggcagatatcggtgcaggatagttatcagatattctcctgatacttatcaga 13045350  T
Q  183 aagtatcgg 191  Q
    |||||||||    
T  13045351 aagtatcgg 13045359  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 82 - 239
Target Start/End: Original strand, 6707915 - 6708073
Alignment:
Q  82 atactcaagagttaagttattttaattaacattaattgggaagtattggggcagatattggtgcatgataattatcggatactctcctgatacgtatcgg 181  Q
    |||||||||||||||||||||||| | ||||||||||||| | ||  ||||||| ||| |||||  | ||||||||| ||||||| |||||| |||||||    
T  6707915 atactcaagagttaagttattttagtcaacattaattggggaataacggggcaggtatcggtgctgggtaattatcgaatactcttctgataagtatcgg 6708014  T
Q  182 gaagtatcggataatta-nnnnnnnnaaaataaaatttaatcttcggatactcttctga 239  Q
    |||||||||||||||||         ||||||| |||||||||||||||||||| ||||    
T  6708015 gaagtatcggataattatttttttttaaaataatatttaatcttcggatactctcctga 6708073  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 86 - 198
Target Start/End: Complemental strand, 31079839 - 31079730
Alignment:
Q  86 tcaagagttaagttattttaattaacattaattgggaagtattggggcagatattggtgcatgataattatcggatactctcctgatacgtatcgggaag 185  Q
    |||||| ||||||||||||| ||||||   |||||||| ||| || |||| ||| ||||||||||||| |||||||||||||||||||||||||||||||    
T  31079839 tcaagatttaagttattttagttaaca---attgggaaatatcggagcaggtatcggtgcatgataatcatcggatactctcctgatacgtatcgggaag 31079743  T
Q  186 tatcggataatta 198  Q
    |||| ||||||||    
T  31079742 tatcagataatta 31079730  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 82 - 198
Target Start/End: Original strand, 13607659 - 13607775
Alignment:
Q  82 atactcaagagttaagttattttaattaacattaattgggaagtattggggcagatattggtgcatgataattatcggatactctcctgatacgtatcgg 181  Q
    |||||||||| ||||||||||||| |||||||||||||  || ||||||||||| ||| |||| | ||||||||||  ||||| ||||||||||||||||    
T  13607659 atactcaagaattaagttattttagttaacattaattgaaaaatattggggcaggtatcggtgtaggataattatcatatactatcctgatacgtatcgg 13607758  T
Q  182 gaagtatcggataatta 198  Q
    ||||||||  |||||||    
T  13607759 gaagtatcatataatta 13607775  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 107 - 234
Target Start/End: Complemental strand, 26327373 - 26327245
Alignment:
Q  107 ttaacattaattgggaagtattggggcagatattggtgcatgataattatcggatactctcctgatacgtatcgggaagtatcggataatta-nnnnnnn 205  Q
    ||||||||||||| ||| ||| ||||||| ||| |||||| |||||| |||| ||||||| | |||| ||||||||||||||||||||||||            
T  26327373 ttaacattaattgcgaaatatcggggcaggtatcggtgcaggataatcatcgaatactcttcagataagtatcgggaagtatcggataattatttttttt 26327274  T
Q  206 naaaataaaatttaatcttcggatactct 234  Q
     ||||||||||||||||||||||||||||    
T  26327273 aaaaataaaatttaatcttcggatactct 26327245  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 82 - 189
Target Start/End: Original strand, 13061248 - 13061355
Alignment:
Q  82 atactcaagagttaagttattttaattaacattaattgggaagtattggggcagatattggtgcatgataattatcggatactctcctgatacgtatcgg 181  Q
    |||||||| | ||||||||||||| |||| |||||||||||| || |||||||| ||||| |||| |||| ||||| ||||||||||| ||||||||| |    
T  13061248 atactcaaaaattaagttattttagttaatattaattgggaaatactggggcaggtattgctgcaagatagttatcagatactctcctaatacgtatcag 13061347  T
Q  182 gaagtatc 189  Q
     |||||||    
T  13061348 aaagtatc 13061355  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 17 - 84
Target Start/End: Original strand, 31740489 - 31740556
Alignment:
Q  17 tgttatactatatccaaaaggaacattgttagtgttatattatatcgatccaaaaaggaagcactata 84  Q
    ||||||| |||||||||||||||||||||||||| |||| |||||||||||||||| |||||||||||    
T  31740489 tgttatattatatccaaaaggaacattgttagtgctatactatatcgatccaaaaaagaagcactata 31740556  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 82 - 239
Target Start/End: Complemental strand, 11105530 - 11105372
Alignment:
Q  82 atactcaagagttaagttattttaattaacattaattgggaagtattggggcagatattggtgcatgataattatcggatactctcctgatacgtatcgg 181  Q
    |||||||||| |||| |||||||| ||||||||||||| ||||||| || | |||||| | || | |||||| ||||||||||||  ||||| ||||  |    
T  11105530 atactcaagaattaatttattttatttaacattaattgagaagtatcggagaagatatcgttgtaggataatgatcggatactcttttgatatgtatacg 11105431  T
Q  182 gaagtatcggataatta-nnnnnnnnaaaataaaatttaatcttcggatactcttctga 239  Q
    ||||||||| |||||||         |||||||||||||||||||| ||| ||||||||    
T  11105430 gaagtatcgaataattattttttaaaaaaataaaatttaatcttcgaatattcttctga 11105372  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 20 - 84
Target Start/End: Complemental strand, 7255250 - 7255185
Alignment:
Q  20 tatactatatccaaaaggaacatt-gttagtgttatattatatcgatccaaaaaggaagcactata 84  Q
    |||||||||||||||||||||||| |||| ||||||| |||||||||||||||| |||||||||||    
T  7255250 tatactatatccaaaaggaacatttgttaatgttatactatatcgatccaaaaaagaagcactata 7255185  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 16 - 72
Target Start/End: Original strand, 22988912 - 22988968
Alignment:
Q  16 gtgttatactatatccaaaaggaacattgttagtgttatattatatcgatccaaaaa 72  Q
    |||||||||| |||||||||||||||||||||||| |||| ||||||||||||||||    
T  22988912 gtgttatactgtatccaaaaggaacattgttagtgctatactatatcgatccaaaaa 22988968  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 16 - 72
Target Start/End: Complemental strand, 23799484 - 23799428
Alignment:
Q  16 gtgttatactatatccaaaaggaacattgttagtgttatattatatcgatccaaaaa 72  Q
    |||||||||| |||||||||||||||||||||||| |||| ||||||||||||||||    
T  23799484 gtgttatactgtatccaaaaggaacattgttagtgctatactatatcgatccaaaaa 23799428  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 16 - 84
Target Start/End: Complemental strand, 26327627 - 26327559
Alignment:
Q  16 gtgttatactatatccaaaaggaacattgttagtgttatattatatcgatccaaaaaggaagcactata 84  Q
    ||||||||||||||| |||| | ||||||||||||||||| ||||| |||||||||| |||||||||||    
T  26327627 gtgttatactatatctaaaatgtacattgttagtgttatactatattgatccaaaaaagaagcactata 26327559  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 17 - 84
Target Start/End: Original strand, 32130332 - 32130399
Alignment:
Q  17 tgttatactatatccaaaaggaacattgttagtgttatattatatcgatccaaaaaggaagcactata 84  Q
    ||||||||| ||||||||||||||||||||| || |||| ||||| |||||||||| |||||||||||    
T  32130332 tgttatactttatccaaaaggaacattgttaatgctatactatattgatccaaaaaagaagcactata 32130399  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 15 - 84
Target Start/End: Complemental strand, 32018429 - 32018360
Alignment:
Q  15 ggtgttatactatatccaaaaggaacattgttagtgttatattatatcgatccaaaaaggaagcactata 84  Q
    |||| |||||||||||||||| ||||||||||||||||||| |||||| ||| ||||| ||| |||||||    
T  32018429 ggtgctatactatatccaaaaagaacattgttagtgttatactatatcaatctaaaaaagaaacactata 32018360  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 20 - 84
Target Start/End: Complemental strand, 3212897 - 3212833
Alignment:
Q  20 tatactatatccaaaaggaacattgttagtgttatattatatcgatccaaaaaggaagcactata 84  Q
    |||||||||| ||||| ||||||||||||||||||| |||||||||| |||||  ||||||||||    
T  3212897 tatactatattcaaaaagaacattgttagtgttatactatatcgatctaaaaaataagcactata 3212833  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 20 - 72
Target Start/End: Original strand, 6707830 - 6707882
Alignment:
Q  20 tatactatatccaaaaggaacattgttagtgttatattatatcgatccaaaaa 72  Q
    |||||||||||||||| ||||||||||||||||||| ||||| ||||||||||    
T  6707830 tatactatatccaaaatgaacattgttagtgttatactatattgatccaaaaa 6707882  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 23 - 84
Target Start/End: Original strand, 7188059 - 7188119
Alignment:
Q  23 actatatccaaaaggaacattgttagtgttatattatatcgatccaaaaaggaagcactata 84  Q
    |||||||||||||||||| ||||||||| |||| |||||||||||||||| ||| |||||||    
T  7188059 actatatccaaaaggaac-ttgttagtgctatactatatcgatccaaaaaagaatcactata 7188119  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 16 - 81
Target Start/End: Complemental strand, 11105619 - 11105554
Alignment:
Q  16 gtgttatactatatccaaaaggaacattgttagtgttatattatatcgatccaaaaaggaagcact 81  Q
    |||||||  ||||||||||| ||||||||||||||||||| |||||| ||||||||  ||||||||    
T  11105619 gtgttattttatatccaaaatgaacattgttagtgttatactatatcaatccaaaagagaagcact 11105554  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 23 - 84
Target Start/End: Original strand, 31195631 - 31195691
Alignment:
Q  23 actatatccaaaaggaacattgttagtgttatattatatcgatccaaaaaggaagcactata 84  Q
    |||||||||||||||||| ||||||||| |||| |||||||||||||||| ||| |||||||    
T  31195631 actatatccaaaaggaac-ttgttagtgctatactatatcgatccaaaaaagaatcactata 31195691  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 21 - 72
Target Start/End: Original strand, 13045172 - 13045223
Alignment:
Q  21 atactatatccaaaaggaacattgttagtgttatattatatcgatccaaaaa 72  Q
    ||||||||||||||||||| || |||||||||||| |||||| |||||||||    
T  13045172 atactatatccaaaaggaagatcgttagtgttatactatatcaatccaaaaa 13045223  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 17 - 84
Target Start/End: Original strand, 13607565 - 13607632
Alignment:
Q  17 tgttatactatatccaaaaggaacattgttagtgttatattatatcgatccaaaaaggaagcactata 84  Q
    ||||||| ||||| |||||| || ||||| ||||||||| || ||||||||||||| |||||||||||    
T  13607565 tgttatattatattcaaaagaaaaattgtaagtgttatactaaatcgatccaaaaaagaagcactata 13607632  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 23 - 84
Target Start/End: Original strand, 1036096 - 1036156
Alignment:
Q  23 actatatccaaaaggaacattgttagtgttatattatatcgatccaaaaaggaagcactata 84  Q
    ||||||||||||| |||| ||||||||| |||| |||||||||||||||| ||| |||||||    
T  1036096 actatatccaaaatgaac-ttgttagtgatatactatatcgatccaaaaaagaatcactata 1036156  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 28 - 84
Target Start/End: Complemental strand, 8357712 - 8357657
Alignment:
Q  28 atccaaaaggaacattgttagtgttatattatatcgatccaaaaaggaagcactata 84  Q
    ||||||||||||| ||||||||  |||||||||| |||||||||| |||||||||||    
T  8357712 atccaaaaggaac-ttgttagtactatattatattgatccaaaaaagaagcactata 8357657  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 16 - 84
Target Start/End: Original strand, 13061160 - 13061228
Alignment:
Q  16 gtgttatactatatccaaaaggaacattgttagtgttatattatatcgatccaaaaaggaagcactata 84  Q
    ||||||||||||| |||| ||||| ||  |||||| |||| |||||||||||||||| ||||| |||||    
T  13061160 gtgttatactatacccaagaggaagatcattagtgctatactatatcgatccaaaaaagaagcgctata 13061228  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 83 - 117
Target Start/End: Complemental strand, 3212812 - 3212778
Alignment:
Q  83 tactcaagagttaagttattttaattaacattaat 117  Q
    ||||||||||||||||||||||| |||||||||||    
T  3212812 tactcaagagttaagttattttagttaacattaat 3212778  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 158 - 191
Target Start/End: Complemental strand, 3212576 - 3212543
Alignment:
Q  158 ggatactctcctgatacgtatcgggaagtatcgg 191  Q
    ||||||||||| ||||||||||||||||||||||    
T  3212576 ggatactctccggatacgtatcgggaagtatcgg 3212543  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 158 - 191
Target Start/End: Original strand, 31195888 - 31195921
Alignment:
Q  158 ggatactctcctgatacgtatcgggaagtatcgg 191  Q
    ||||||||||| ||||||||||||||||||||||    
T  31195888 ggatactctccagatacgtatcgggaagtatcgg 31195921  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #33
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 207 - 235
Target Start/End: Complemental strand, 26560917 - 26560889
Alignment:
Q  207 aaaataaaatttaatcttcggatactctt 235  Q
    |||||||||||||||||||||||||||||    
T  26560917 aaaataaaatttaatcttcggatactctt 26560889  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #34
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 158 - 190
Target Start/End: Original strand, 32130678 - 32130710
Alignment:
Q  158 ggatactctcctgatacgtatcgggaagtatcg 190  Q
    ||||||||||||||||||||||||||| |||||    
T  32130678 ggatactctcctgatacgtatcgggaaatatcg 32130710  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 140; Significance: 2e-73; HSPs: 53)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 140; E-Value: 2e-73
Query Start/End: Original strand, 11 - 198
Target Start/End: Complemental strand, 3892279 - 3892092
Alignment:
Q  11 cataggtgttatactatatccaaaaggaacattgttagtgttatattatatcgatccaaaaaggaagcactatactcaagagttaagttattttaattaa 110  Q
    |||| ||||||||||||||||||||| ||||||||||||| |||| |||||| ||||||||| |||||||||||||||||||||||||||||||| ||||    
T  3892279 cataagtgttatactatatccaaaagaaacattgttagtgctatactatatcaatccaaaaaagaagcactatactcaagagttaagttattttagttaa 3892180  T
Q  111 cattaattgggaagtattggggcagatattggtgcatgataattatcggatactctcctgatacgtatcgggaagtatcggataatta 198  Q
    ||||||||||||||||||||||||| ||| |||||| ||||||||||||||||||||||||||||||||| |||||||| ||||||||    
T  3892179 cattaattgggaagtattggggcaggtatcggtgcaggataattatcggatactctcctgatacgtatcgagaagtatcagataatta 3892092  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 112; E-Value: 1e-56
Query Start/End: Original strand, 47 - 198
Target Start/End: Complemental strand, 37372539 - 37372388
Alignment:
Q  47 agtgttatattatatcgatccaaaaaggaagcactatactcaagagttaagttattttaattaacattaattgggaagtattggggcagatattggtgca 146  Q
    |||| ||||||||||||||||||||| |||||||||||||||||| ||||||||||||| ||||||||||||||||||||||||||||| ||| ||||||    
T  37372539 agtgctatattatatcgatccaaaaaagaagcactatactcaagaattaagttattttagttaacattaattgggaagtattggggcaggtatcggtgca 37372440  T
Q  147 tgataattatcggatactctcctgatacgtatcgggaagtatcggataatta 198  Q
      |||||||||||||||||||||||||||||| ||||||||||| |||||||    
T  37372439 aaataattatcggatactctcctgatacgtattgggaagtatcgaataatta 37372388  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 87; E-Value: 8e-42
Query Start/End: Original strand, 86 - 239
Target Start/End: Complemental strand, 32425161 - 32425007
Alignment:
Q  86 tcaagagttaagttattttaattaacattaattgggaagtattggggcagatattggtgcatgataattatcggatactctcctgatacgtatcgggaag 185  Q
    |||||||||||||||||||| |||||||||||||| |||||| ||||||||||  |||| | |||||| |||||||||||||||||||| ||||||||||    
T  32425161 tcaagagttaagttattttagttaacattaattggaaagtatcggggcagataccggtgtaggataatgatcggatactctcctgatacatatcgggaag 32425062  T
Q  186 tatcggataatta-nnnnnnnnaaaataaaatttaatcttcggatactcttctga 239  Q
    |||||||||||||         |||||||||||||||||||||||||||||||||    
T  32425061 tatcggataattattttttttaaaaataaaatttaatcttcggatactcttctga 32425007  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 16 - 198
Target Start/End: Complemental strand, 27968424 - 27968233
Alignment:
Q  16 gtgttatactatatccaaaaggaacattgttagtgttatattatatcgatccaaaaaggaagcactatactcaaga------------gttaagttattt 103  Q
    |||||||||||||||||||||||||||||||||||||||| |||||||||  |||||   | |||||||  ||| |            ||||||||||||    
T  27968424 gtgttatactatatccaaaaggaacattgttagtgttatactatatcgataaaaaaa---aacactatatccaaaaaagaacacatcagttaagttattt 27968328  T
Q  104 taattaacattaattgggaagtattggggcagatattggtgcatgataattatcggatactctcctgatacgtatcgggaagtatcggataatta 198  Q
    || |||||||||||||||||||||  ||||||||||  ||||| |||||||||||||||||||||||||| |||||| |||||||| ||||||||    
T  27968327 tagttaacattaattgggaagtatcagggcagatatcagtgcaagataattatcggatactctcctgatatgtatcgagaagtatcagataatta 27968233  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 20 - 179
Target Start/End: Original strand, 5818143 - 5818292
Alignment:
Q  20 tatactatatccaaaaggaacattgttagtgttatattatatcgatccaaaaaggaagcactatactcaagagttaagttattttaattaacattaattg 119  Q
    |||||||||| |||||||||||||||||||| |||| || ||| ||||||||  |||| ||||||||||||||||||||||||||| |||||||||        
T  5818143 tatactatattcaaaaggaacattgttagtgctatactacatcaatccaaaacagaagtactatactcaagagttaagttattttagttaacatta---- 5818238  T
Q  120 ggaagtattggggcagatattggtgcatgataattatcggatactctcctgatacgtatc 179  Q
          |||||||||| ||| ||||||||||||||||| |||||||| ||||||||||||    
T  5818239 ------attggggcaggtatcggtgcatgataattatcagatactctactgatacgtatc 5818292  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 85 - 198
Target Start/End: Complemental strand, 7411843 - 7411730
Alignment:
Q  85 ctcaagagttaagttattttaattaacattaattgggaagtattggggcagatattggtgcatgataattatcggatactctcctgatacgtatcgggaa 184  Q
    ||||||||||||||||||||| ||||||||||||||||||||| ||||||  |||   || | |||||| ||||||||||||||||||| |||||| |||    
T  7411843 ctcaagagttaagttattttagttaacattaattgggaagtatcggggcatgtatcaatgtaggataatgatcggatactctcctgatatgtatcgagaa 7411744  T
Q  185 gtatcggataatta 198  Q
    ||||||||||||||    
T  7411743 gtatcggataatta 7411730  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 16 - 198
Target Start/End: Complemental strand, 28025410 - 28025219
Alignment:
Q  16 gtgttatactatatccaaaaggaacattgttagtgttatattatatcgatccaaaaaggaagcactat------------actcaagagttaagttattt 103  Q
    ||||||||||||||||||||| |||||||||||||||||| |||||||||   ||||  || ||||||            || ||  |||||||||||||    
T  28025410 gtgttatactatatccaaaagaaacattgttagtgttatactatatcgat---aaaaaaaaacactatatccaaaaaataacacatcagttaagttattt 28025314  T
Q  104 taattaacattaattgggaagtattggggcagatattggtgcatgataattatcggatactctcctgatacgtatcgggaagtatcggataatta 198  Q
    |  ||||||||||||| |||||||  ||||||||||  ||||| |||||||||||||||||||||||||| |||||| |||||||| ||||||||    
T  28025313 tcgttaacattaattgtgaagtatcagggcagatatcagtgcaagataattatcggatactctcctgatatgtatcgagaagtatcagataatta 28025219  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 16 - 239
Target Start/End: Complemental strand, 27886509 - 27886276
Alignment:
Q  16 gtgttatactatatccaaaaggaacattgttagtgttatattatatcgatccaaaaaggaagcactat------------actcaagagttaagttattt 103  Q
    ||||||||||||||||||||| |||||||||||||||||| |||||||||   ||||  || ||||||            || ||  |||||||||||||    
T  27886509 gtgttatactatatccaaaagaaacattgttagtgttatactatatcgat---aaaaaaaaacactatatccaaaaaataacacatcagttaagttattt 27886413  T
Q  104 taattaacattaattgggaagtattggggcagatattggtgcatgataattatcggatactctcctgatacgtatcgggaagtatcggataatta-nnnn 202  Q
    |  ||||||||||||| |||||||  ||||||||||  ||||| |||||||||||||||||||||||||| |||| | |||||||| ||||| ||         
T  27886412 tcgttaacattaattgtgaagtatcagggcagatatcagtgcaagataattatcggatactctcctgatatgtattgagaagtatcagataactattttt 27886313  T
Q  203 nnnnaaaataaaatttaatcttcggatactcttctga 239  Q
        |||||||| ||||||||||||||||||| ||||    
T  27886312 tttaaaaataaactttaatcttcggatactctcctga 27886276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 16 - 239
Target Start/End: Complemental strand, 27945167 - 27944934
Alignment:
Q  16 gtgttatactatatccaaaaggaacattgttagtgttatattatatcgatccaaaaaggaagcactat------------actcaagagttaagttattt 103  Q
    ||||||||||||||||||||| |||||||||||||||||| |||||||||   ||||  || ||||||            || ||  |||||||||||||    
T  27945167 gtgttatactatatccaaaagaaacattgttagtgttatactatatcgat---aaaaaaaaacactatatccaaaaaataacacatcagttaagttattt 27945071  T
Q  104 taattaacattaattgggaagtattggggcagatattggtgcatgataattatcggatactctcctgatacgtatcgggaagtatcggataatta-nnnn 202  Q
    |  ||||||||||||| |||||||  ||||||||||  ||||| |||||||||||||||||||||||||| |||| | |||||||| ||||| ||         
T  27945070 tcgttaacattaattgtgaagtatcagggcagatatcagtgcaagataattatcggatactctcctgatatgtattgagaagtatcagataactattttt 27944971  T
Q  203 nnnnaaaataaaatttaatcttcggatactcttctga 239  Q
        |||||||| ||||||||||||||||||| ||||    
T  27944970 tttaaaaataaactttaatcttcggatactctcctga 27944934  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 17 - 239
Target Start/End: Complemental strand, 20182698 - 20182459
Alignment:
Q  17 tgttatactatatccaaaaggaacattgttagtgttatattatatcgatccaaaaaggaagcactatactcaa-----------------gagttaagtt 99  Q
    ||||||||||||||||||||||||||||||||||||||| |||||||||  ||||| ||||||| ||| ||||                 ||||||||||    
T  20182698 tgttatactatatccaaaaggaacattgttagtgttatactatatcgataaaaaaaagaagcaccata-tcaaaaaaaaaatacatgggtgagttaagtt 20182600  T
Q  100 attttaattaacattaattgggaagtattggggcagatattggtgcatgataattatcggatactctcctgatacgtatcgggaagtatcggataattan 199  Q
    |||||| |||||||| |||| ||| ||| | ||||||||| | || |  ||||||||| |||||| || ||||||||||||||||||||||| ||||||     
T  20182599 attttagttaacatttattgtgaaatatcgaggcagatatcgatgtagaataattatcagatactttcttgatacgtatcgggaagtatcggttaattat 20182500  T
Q  200 nnnnnnnaaaa-taaaatttaatcttcggatactcttctga 239  Q
           |||| ||||||||||||||| |||||||| ||||    
T  20182499 ttttttaaaaattaaaatttaatcttcagatactctactga 20182459  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 83 - 197
Target Start/End: Complemental strand, 38388910 - 38388796
Alignment:
Q  83 tactcaagagttaagttattttaattaacattaattgggaagtattggggcagatattggtgcatgataattatcggatactctcctgatacgtatcggg 182  Q
    ||||| ||||||||||| ||||| | ||||||||||||||| ||| ||||||| ||| |||| | ||||||||||| ||||||| |||||| ||||| ||    
T  38388910 tactcgagagttaagtttttttagtcaacattaattgggaaatatcggggcaggtatcggtgtaggataattatcgaatactcttctgataagtatcagg 38388811  T
Q  183 aagtatcggataatt 197  Q
    |||||| ||||||||    
T  38388810 aagtattggataatt 38388796  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 20 - 84
Target Start/End: Complemental strand, 6028931 - 6028867
Alignment:
Q  20 tatactatatccaaaaggaacattgttagtgttatattatatcgatccaaaaaggaagcactata 84  Q
    ||||||||||||||||||||||||||||||| |||| |||||||||||||||| |||||||||||    
T  6028931 tatactatatccaaaaggaacattgttagtgctatactatatcgatccaaaaaagaagcactata 6028867  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 20 - 84
Target Start/End: Original strand, 27108985 - 27109049
Alignment:
Q  20 tatactatatccaaaaggaacattgttagtgttatattatatcgatccaaaaaggaagcactata 84  Q
    |||||||||||||||||||| ||||||||||||||| |||||||||||||||| |||||||||||    
T  27108985 tatactatatccaaaaggaaaattgttagtgttatactatatcgatccaaaaaagaagcactata 27109049  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 20 - 84
Target Start/End: Complemental strand, 32877896 - 32877832
Alignment:
Q  20 tatactatatccaaaaggaacattgttagtgttatattatatcgatccaaaaaggaagcactata 84  Q
    ||||||||||||||||||||||||||||||| |||| |||||||||||||||| |||||||||||    
T  32877896 tatactatatccaaaaggaacattgttagtgctatactatatcgatccaaaaaagaagcactata 32877832  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 17 - 84
Target Start/End: Complemental strand, 19436696 - 19436629
Alignment:
Q  17 tgttatactatatccaaaaggaacattgttagtgttatattatatcgatccaaaaaggaagcactata 84  Q
    ||||||||||||||||||||||||||||||| || |||| |||||||||||||||| |||||||||||    
T  19436696 tgttatactatatccaaaaggaacattgttaatgctatactatatcgatccaaaaaagaagcactata 19436629  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 17 - 84
Target Start/End: Complemental strand, 19572845 - 19572778
Alignment:
Q  17 tgttatactatatccaaaaggaacattgttagtgttatattatatcgatccaaaaaggaagcactata 84  Q
    ||||||||||||||||||||||||||||||| || |||| |||||||||||||||| |||||||||||    
T  19572845 tgttatactatatccaaaaggaacattgttaatgctatactatatcgatccaaaaaagaagcactata 19572778  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 17 - 84
Target Start/End: Original strand, 19947649 - 19947716
Alignment:
Q  17 tgttatactatatccaaaaggaacattgttagtgttatattatatcgatccaaaaaggaagcactata 84  Q
    |||||||||||| ||||||| |||||||||| ||||||| |||||||||||||||| |||||||||||    
T  19947649 tgttatactatacccaaaagaaacattgttaatgttatactatatcgatccaaaaaagaagcactata 19947716  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 11 - 72
Target Start/End: Complemental strand, 32917 - 32856
Alignment:
Q  11 cataggtgttatactatatccaaaaggaacattgttagtgttatattatatcgatccaaaaa 72  Q
    |||| ||||||||||||||||||||| |||||||||||||||||| ||||| ||||||||||    
T  32917 cataagtgttatactatatccaaaagaaacattgttagtgttatactatattgatccaaaaa 32856  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 88 - 234
Target Start/End: Complemental strand, 29355862 - 29355714
Alignment:
Q  88 aagagttaagttattttaattaacattaattgggaagtattggggcagatattggtgcatgataattatcggatactctcctgatacgtatcgggaagta 187  Q
    ||||||||||||||| || |||||||| |||| ||| ||| | ||||||||| |  | | |||||||||| |||||| |||| |||||||||||||||||    
T  29355862 aagagttaagttattgtagttaacatttattgtgaaatatcgaggcagatatcgacgtaggataattatcagatactttccttatacgtatcgggaagta 29355763  T
Q  188 tcggataattannnnnnnnaaaa--taaaatttaatcttcggatactct 234  Q
    |||  ||||||        ||||  ||||||||||||||||||||||||    
T  29355762 tcgactaattactttttttaaaaattaaaatttaatcttcggatactct 29355714  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 23 - 84
Target Start/End: Complemental strand, 5540258 - 5540198
Alignment:
Q  23 actatatccaaaaggaacattgttagtgttatattatatcgatccaaaaaggaagcactata 84  Q
    |||||||||||||||||| ||||||||| ||||||||||||||||||||| ||| |||||||    
T  5540258 actatatccaaaaggaac-ttgttagtgctatattatatcgatccaaaaaagaatcactata 5540198  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 23 - 84
Target Start/End: Original strand, 12579818 - 12579878
Alignment:
Q  23 actatatccaaaaggaacattgttagtgttatattatatcgatccaaaaaggaagcactata 84  Q
    |||||||||||||||||| ||||||||| |||| |||||||||||||||| |||||||||||    
T  12579818 actatatccaaaaggaac-ttgttagtgctatactatatcgatccaaaaaagaagcactata 12579878  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 23 - 84
Target Start/End: Complemental strand, 32760191 - 32760131
Alignment:
Q  23 actatatccaaaaggaacattgttagtgttatattatatcgatccaaaaaggaagcactata 84  Q
    |||||||||||||||||| ||||||||| |||| |||||||||||||||| |||||||||||    
T  32760191 actatatccaaaaggaac-ttgttagtgctatactatatcgatccaaaaaagaagcactata 32760131  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 23 - 84
Target Start/End: Complemental strand, 36484260 - 36484200
Alignment:
Q  23 actatatccaaaaggaacattgttagtgttatattatatcgatccaaaaaggaagcactata 84  Q
    |||||||||||||||||| ||||||||| |||| |||||||||||||||| |||||||||||    
T  36484260 actatatccaaaaggaac-ttgttagtgctatactatatcgatccaaaaaagaagcactata 36484200  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 20 - 83
Target Start/End: Complemental strand, 7411930 - 7411867
Alignment:
Q  20 tatactatatccaaaaggaacattgttagtgttatattatatcgatccaaaaaggaagcactat 83  Q
    |||| |||||| ||||  |||||||||||||||||| ||||||||||||||||| |||||||||    
T  7411930 tatattatatctaaaataaacattgttagtgttatactatatcgatccaaaaagaaagcactat 7411867  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 23 - 84
Target Start/End: Original strand, 28875847 - 28875907
Alignment:
Q  23 actatatccaaaaggaacattgttagtgttatattatatcgatccaaaaaggaagcactata 84  Q
    |||||||||||||||||| ||||||||| |||| |||||||||||||||| ||| |||||||    
T  28875847 actatatccaaaaggaac-ttgttagtgctatactatatcgatccaaaaaagaatcactata 28875907  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 15 - 84
Target Start/End: Complemental strand, 40412876 - 40412807
Alignment:
Q  15 ggtgttatactatatccaaaaggaacattgttagtgttatattatatcgatccaaaaaggaagcactata 84  Q
    |||| |||||||||||||||  |||||||||||||| |||| |||||||||| |||||  ||||||||||    
T  40412876 ggtgctatactatatccaaagagaacattgttagtgctatactatatcgatctaaaaaaaaagcactata 40412807  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 23 - 72
Target Start/End: Original strand, 45216502 - 45216550
Alignment:
Q  23 actatatccaaaaggaacattgttagtgttatattatatcgatccaaaaa 72  Q
    |||||||||||||||||| |||||||||||||| ||||||||||||||||    
T  45216502 actatatccaaaaggaac-ttgttagtgttatactatatcgatccaaaaa 45216550  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 20 - 84
Target Start/End: Original strand, 8170896 - 8170960
Alignment:
Q  20 tatactatatccaaaaggaacattgttagtgttatattatatcgatccaaaaaggaagcactata 84  Q
    ||||| |||||||||| |||||||| ||||| |||| |||||||||| ||||| |||||||||||    
T  8170896 tatacaatatccaaaaagaacattggtagtgctatactatatcgatctaaaaaagaagcactata 8170960  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 25 - 84
Target Start/End: Complemental strand, 37669403 - 37669345
Alignment:
Q  25 tatatccaaaaggaacattgttagtgttatattatatcgatccaaaaaggaagcactata 84  Q
    |||||||||||| ||| ||||||||| |||||||||| |||||||||| |||||||||||    
T  37669403 tatatccaaaagaaac-ttgttagtgctatattatattgatccaaaaaagaagcactata 37669345  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 20 - 70
Target Start/End: Complemental strand, 28737826 - 28737776
Alignment:
Q  20 tatactatatccaaaaggaacattgttagtgttatattatatcgatccaaa 70  Q
    ||||||||||||||||| |||||| ||| || |||||||||||||||||||    
T  28737826 tatactatatccaaaagaaacattattaatggtatattatatcgatccaaa 28737776  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 23 - 84
Target Start/End: Complemental strand, 4246765 - 4246705
Alignment:
Q  23 actatatccaaaaggaacattgttagtgttatattatatcgatccaaaaaggaagcactata 84  Q
    ||||||||||||| |||| ||||||||| |||| |||||||||||||||| ||| |||||||    
T  4246765 actatatccaaaatgaac-ttgttagtgatatactatatcgatccaaaaaagaatcactata 4246705  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 156 - 189
Target Start/End: Complemental strand, 27886291 - 27886258
Alignment:
Q  156 tcggatactctcctgatacgtatcgggaagtatc 189  Q
    ||||||||||||||||||||||||||||||||||    
T  27886291 tcggatactctcctgatacgtatcgggaagtatc 27886258  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 156 - 189
Target Start/End: Complemental strand, 27944949 - 27944916
Alignment:
Q  156 tcggatactctcctgatacgtatcgggaagtatc 189  Q
    ||||||||||||||||||||||||||||||||||    
T  27944949 tcggatactctcctgatacgtatcgggaagtatc 27944916  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 23 - 84
Target Start/End: Original strand, 32638496 - 32638556
Alignment:
Q  23 actatatccaaaaggaacattgttagtgttatattatatcgatccaaaaaggaagcactata 84  Q
    ||||||| |||||||||| ||||||||| ||||  ||||||||||||||| |||||||||||    
T  32638496 actatattcaaaaggaac-ttgttagtgctatacaatatcgatccaaaaaagaagcactata 32638556  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 23 - 84
Target Start/End: Original strand, 34900651 - 34900711
Alignment:
Q  23 actatatccaaaaggaacattgttagtgttatattatatcgatccaaaaaggaagcactata 84  Q
    ||||||||||||| |||| ||||||||| |||| |||||||||||||||| ||| |||||||    
T  34900651 actatatccaaaatgaac-ttgttagtgatatactatatcgatccaaaaaagaatcactata 34900711  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 156 - 189
Target Start/End: Complemental strand, 37372360 - 37372327
Alignment:
Q  156 tcggatactctcctgatacgtatcgggaagtatc 189  Q
    ||||||||||||||||||||||||||||||||||    
T  37372360 tcggatactctcctgatacgtatcgggaagtatc 37372327  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 27 - 72
Target Start/End: Complemental strand, 38388988 - 38388943
Alignment:
Q  27 tatccaaaaggaacattgttagtgttatattatatcgatccaaaaa 72  Q
    ||||||||| ||||||||||||||||||| ||||||||| ||||||    
T  38388988 tatccaaaatgaacattgttagtgttatactatatcgattcaaaaa 38388943  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 23 - 84
Target Start/End: Original strand, 43770986 - 43771046
Alignment:
Q  23 actatatccaaaaggaacattgttagtgttatattatatcgatccaaaaaggaagcactata 84  Q
    |||||||  ||||||||| |||||||||||||| |||||||||||||||| ||| |||||||    
T  43770986 actatatataaaaggaac-ttgttagtgttatactatatcgatccaaaaaagaatcactata 43771046  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 20 - 84
Target Start/End: Complemental strand, 29355946 - 29355882
Alignment:
Q  20 tatactatatccaaaaggaacattgttagtgttatattatatcgatccaaaaaggaagcactata 84  Q
    |||||||||| |||||| |||||||||||||||||| |||||  ||  ||||| |||||||||||    
T  29355946 tatactatattcaaaagaaacattgttagtgttatactatattaataaaaaaaagaagcactata 29355882  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 16 - 84
Target Start/End: Original strand, 41098753 - 41098821
Alignment:
Q  16 gtgttatactatatccaaaaggaacattgttagtgttatattatatcgatccaaaaaggaagcactata 84  Q
    ||||||||||||||| |||| | ||||||||| ||||||| ||||| |||||||| | ||| |||||||    
T  41098753 gtgttatactatatctaaaatgtacattgttaatgttatactatattgatccaaacaagaaacactata 41098821  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 25 - 84
Target Start/End: Complemental strand, 42949505 - 42949446
Alignment:
Q  25 tatatccaaaaggaacattgttagtgttatattatatcgatccaaaaaggaagcactata 84  Q
    |||||| ||||  |||||||||||||  ||| |||||||||||||||| |||||||||||    
T  42949505 tatatcaaaaataaacattgttagtgcgatactatatcgatccaaaaaagaagcactata 42949446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #42
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 83 - 117
Target Start/End: Original strand, 8170981 - 8171015
Alignment:
Q  83 tactcaagagttaagttattttaattaacattaat 117  Q
    ||||||||||||||||||||||| |||||||||||    
T  8170981 tactcaagagttaagttattttagttaacattaat 8171015  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #43
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 136 - 178
Target Start/End: Original strand, 27109111 - 27109153
Alignment:
Q  136 atattggtgcatgataattatcggatactctcctgatacgtat 178  Q
    |||| |||||| ||||||||||||||||||| |||||||||||    
T  27109111 atatcggtgcaggataattatcggatactcttctgatacgtat 27109153  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #44
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 156 - 190
Target Start/End: Original strand, 30804762 - 30804796
Alignment:
Q  156 tcggatactctcctgatacgtatcgggaagtatcg 190  Q
    |||||||||||||||||||||||||| ||||||||    
T  30804762 tcggatactctcctgatacgtatcggaaagtatcg 30804796  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #45
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 158 - 191
Target Start/End: Original strand, 2872929 - 2872962
Alignment:
Q  158 ggatactctcctgatacgtatcgggaagtatcgg 191  Q
    ||||||||||| ||||||||||||||||||||||    
T  2872929 ggatactctccggatacgtatcgggaagtatcgg 2872962  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #46
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 23 - 84
Target Start/End: Original strand, 22201100 - 22201160
Alignment:
Q  23 actatatccaaaaggaacattgttagtgttatattatatcgatccaaaaaggaagcactata 84  Q
    |||||||||||||| ||| ||||||||  |||| |||||||||||||||| ||| |||||||    
T  22201100 actatatccaaaagaaac-ttgttagtactatactatatcgatccaaaaaagaatcactata 22201160  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #47
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 23 - 84
Target Start/End: Complemental strand, 25022592 - 25022531
Alignment:
Q  23 actatatccaaaaggaacattgttagtgttatattatatcgatccaaaaaggaagcactata 84  Q
    ||||||||||||| |||||||| || || |||| ||||| |||||||||| ||| |||||||    
T  25022592 actatatccaaaaagaacattgataatgctatactatattgatccaaaaaagaaacactata 25022531  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #48
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 156 - 189
Target Start/End: Complemental strand, 29355724 - 29355691
Alignment:
Q  156 tcggatactctcctgatacgtatcgggaagtatc 189  Q
    ||||||||||||||| ||||||||||||||||||    
T  29355724 tcggatactctcctgctacgtatcgggaagtatc 29355691  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #49
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 158 - 191
Target Start/End: Complemental strand, 32759472 - 32759439
Alignment:
Q  158 ggatactctcctgatacgtatcgggaagtatcgg 191  Q
    ||||||||||| ||||||||||||||||||||||    
T  32759472 ggatactctccagatacgtatcgggaagtatcgg 32759439  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #50
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 158 - 191
Target Start/End: Complemental strand, 32877536 - 32877503
Alignment:
Q  158 ggatactctcctgatacgtatcgggaagtatcgg 191  Q
    ||||||||||| ||||||||||||||||||||||    
T  32877536 ggatactctcccgatacgtatcgggaagtatcgg 32877503  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #51
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 156 - 184
Target Start/End: Complemental strand, 23265750 - 23265722
Alignment:
Q  156 tcggatactctcctgatacgtatcgggaa 184  Q
    |||||||||||||||||||||||||||||    
T  23265750 tcggatactctcctgatacgtatcgggaa 23265722  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #52
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 17 - 84
Target Start/End: Complemental strand, 32425248 - 32425178
Alignment:
Q  17 tgttatactatatccaaaaggaacatt---gttagtgttatattatatcgatccaaaaaggaagcactata 84  Q
    ||||||||||||| ||||| |||||||   |||||||||||| |||||| ||| ||||| ||| |||||||    
T  32425248 tgttatactatattcaaaaagaacattattgttagtgttatactatatcaatctaaaaaagaaacactata 32425178  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #53
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 83 - 115
Target Start/End: Complemental strand, 40412786 - 40412754
Alignment:
Q  83 tactcaagagttaagttattttaattaacatta 115  Q
    ||||||||||||||||||||||| |||||||||    
T  40412786 tactcaagagttaagttattttagttaacatta 40412754  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 133; Significance: 3e-69; HSPs: 75)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 133; E-Value: 3e-69
Query Start/End: Original strand, 17 - 181
Target Start/End: Complemental strand, 42229973 - 42229809
Alignment:
Q  17 tgttatactatatccaaaaggaacattgttagtgttatattatatcgatccaaaaaggaagcactatactcaagagttaagttattttaattaacattaa 116  Q
    ||||||||||||||||||||||| |||||||||| |||| ||||||||| |||||| |||||| ||||||||||||||||||||||||||||||||||||    
T  42229973 tgttatactatatccaaaaggaatattgttagtgctatactatatcgattcaaaaaagaagcaatatactcaagagttaagttattttaattaacattaa 42229874  T
Q  117 ttgggaagtattggggcagatattggtgcatgataattatcggatactctcctgatacgtatcgg 181  Q
    ||||||||||||||||||| |||||||||| ||||||||||||||||||||||||||||||||||    
T  42229873 ttgggaagtattggggcaggtattggtgcaggataattatcggatactctcctgatacgtatcgg 42229809  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 122; E-Value: 1e-62
Query Start/End: Original strand, 11 - 239
Target Start/End: Original strand, 22289524 - 22289753
Alignment:
Q  11 cataggtgttatactatatccaaaaggaacattgttagtgttatattatatcgatccaaaaaggaagcactatactcaagagttaagttattttaattaa 110  Q
    |||| ||||||||||||||||||||| ||||||||||||||| || |||||||||||||||| |||||||||||| ||| ||||||||||||||| ||||    
T  22289524 cataagtgttatactatatccaaaagaaacattgttagtgttgtactatatcgatccaaaaaagaagcactatacccaaaagttaagttattttagttaa 22289623  T
Q  111 cattaattgggaagtattggggcagatattggtgcatgataattatcggatactctcctgatacgtatcgggaagtatcggataattannnnnnnna-aa 209  Q
    |||||||||||||||||| |||||| ||| ||| ||||||||||||| ||||||||||||||||||||  | ||||||| ||| ||||        | ||    
T  22289624 cattaattgggaagtattagggcaggtatcggtacatgataattatcagatactctcctgatacgtattagaaagtatcagatgattattttttaaagaa 22289723  T
Q  210 ataaaatttaatcttcggatactcttctga 239  Q
    ||||||||||||||||||||||||| ||||    
T  22289724 ataaaatttaatcttcggatactctcctga 22289753  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 118; E-Value: 3e-60
Query Start/End: Original strand, 16 - 189
Target Start/End: Complemental strand, 29916102 - 29915929
Alignment:
Q  16 gtgttatactatatccaaaaggaacattgttagtgttatattatatcgatccaaaaaggaagcactatactcaagagttaagttattttaattaacatta 115  Q
    |||||||||||||||||||| ||||||||||||||||||| |||||||||| ||||  ||||||||||||| |||||||||||||||||| |||||||||    
T  29916102 gtgttatactatatccaaaatgaacattgttagtgttatactatatcgatctaaaacagaagcactatactaaagagttaagttattttagttaacatta 29916003  T
Q  116 attgggaagtattggggcagatattggtgcatgataattatcggatactctcctgatacgtatcgggaagtatc 189  Q
    |||||||||||||||||||  ||| | |||| |||||||||| |||||| ||||||||||||||||||||||||    
T  29916002 attgggaagtattggggcatgtatcgatgcaggataattatcagatactatcctgatacgtatcgggaagtatc 29915929  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 118; E-Value: 3e-60
Query Start/End: Original strand, 16 - 189
Target Start/End: Complemental strand, 29965255 - 29965082
Alignment:
Q  16 gtgttatactatatccaaaaggaacattgttagtgttatattatatcgatccaaaaaggaagcactatactcaagagttaagttattttaattaacatta 115  Q
    |||||||||||||||||||| ||||||||||||||||||| |||||||||| ||||  ||||||||||||| |||||||||||||||||| |||||||||    
T  29965255 gtgttatactatatccaaaatgaacattgttagtgttatactatatcgatctaaaacagaagcactatactaaagagttaagttattttagttaacatta 29965156  T
Q  116 attgggaagtattggggcagatattggtgcatgataattatcggatactctcctgatacgtatcgggaagtatc 189  Q
    |||||||||||||||||||  ||| | |||| |||||||||| |||||| ||||||||||||||||||||||||    
T  29965155 attgggaagtattggggcatgtatcgatgcaggataattatcagatactatcctgatacgtatcgggaagtatc 29965082  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 112; E-Value: 1e-56
Query Start/End: Original strand, 11 - 239
Target Start/End: Original strand, 19349407 - 19349632
Alignment:
Q  11 cataggtgttatactatatccaaaaggaacattgttagtgttatattatatcgatccaaaaaggaagcactatactcaagagttaagttattttaattaa 110  Q
    |||| ||||||||||||||||||||| |||||||| |||| |||| |||||||||||||||| ||||||||||||||||||||||| |||||||| ||||    
T  19349407 cataagtgttatactatatccaaaagaaacattgtcagtgctatactatatcgatccaaaaaagaagcactatactcaagagttaaattattttatttaa 19349506  T
Q  111 cattaattgggaagtattggggcagatattggtgcatgataattatcggatactctcctgatacgtatcgggaagtatcggataattannnnnnnnaaaa 210  Q
    | |||||||  || ||||||||||| ||  | |||| |||||||||||||| || ||||||||||||||||||||||||| |||||||        ||||    
T  19349507 cgttaattgaaaattattggggcaggtaaagatgcaggataattatcggattctttcctgatacgtatcgggaagtatcgaataatta---ttgaaaaaa 19349603  T
Q  211 taaaatttaatcttcggatactcttctga 239  Q
     ||||||||||||||| ||||||||||||    
T  19349604 aaaaatttaatcttcgtatactcttctga 19349632  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 108; E-Value: 2e-54
Query Start/End: Original strand, 52 - 234
Target Start/End: Original strand, 41741916 - 41742099
Alignment:
Q  52 tatattatatcgatccaaaaaggaagcactatactcaagagttaagttattttaattaacattaattgggaagtattggggcagatattggtgcatgata 151  Q
    |||| |||||||||| ||||| ||| |||||||||||||||||||||||||||| ||||||||||||||||||||||||||||  |||  ||||| ||||    
T  41741916 tatactatatcgatctaaaaaagaaacactatactcaagagttaagttattttacttaacattaattgggaagtattggggcatgtatcagtgcaggata 41742015  T
Q  152 attatcggatactctcctgatacgtatcgggaagtatcggataatta-nnnnnnnnaaaataaaatttaatcttcggatactct 234  Q
    |||||||||||||||||||||||||||||||||||| ||||||||||         ||||||||||||||||||||||||||||    
T  41742016 attatcggatactctcctgatacgtatcgggaagtaccggataattattttttttaaaaataaaatttaatcttcggatactct 41742099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 106; E-Value: 4e-53
Query Start/End: Original strand, 11 - 236
Target Start/End: Complemental strand, 45347610 - 45347386
Alignment:
Q  11 cataggtgttatactatatccaaaaggaacattgttagtgttatattatatcgatccaaaaaggaagcactatactcaagagttaagttattttaattaa 110  Q
    |||| ||||||||||||  ||||||| |||||||| || | |||| ||||||||||||||||  ||||||||||||||||| ||||||||||||| ||||    
T  45347610 cataagtgttatactat--ccaaaagaaacattgtaagggctatactatatcgatccaaaaaa-aagcactatactcaagatttaagttattttatttaa 45347514  T
Q  111 cattaattgggaagtattggggcagatattggtgcatgataattatcggatactctcctgatacgtatcgggaagtatcggataatta--nnnnnnnnaa 208  Q
    | ||||||| ||| ||||||||||||||| |||||| |||||||||| |||||| |||||||||||||| ||||||||||||||||||          ||    
T  45347513 cgttaattgagaattattggggcagatataggtgcaggataattatcagatactttcctgatacgtatcaggaagtatcggataattattttttaaaaaa 45347414  T
Q  209 aataaaatttaatcttcggatactcttc 236  Q
    ||||||||||||||||||||||||||||    
T  45347413 aataaaatttaatcttcggatactcttc 45347386  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 104; E-Value: 6e-52
Query Start/End: Original strand, 64 - 239
Target Start/End: Original strand, 13748304 - 13748479
Alignment:
Q  64 atccaaaaaggaagcactatactcaagagttaagttattttaattaacattaattgggaagtattggggcagatattggtgcatgataattatcggatac 163  Q
    ||||||||| ||||||||||||||||||||||| |||||||| ||||| |||||||| || ||||||||||| ||| ||| |||||||||||||||||||    
T  13748304 atccaaaaaagaagcactatactcaagagttaaattattttatttaacgttaattggaaattattggggcaggtataggtacatgataattatcggatac 13748403  T
Q  164 tctcctgatacgtatcgggaagtatcggataattannnnnnnnaaaataaaatttaatcttcggatactcttctga 239  Q
    | | |||||||||||||||||||||| ||||||||        |||||||||||||||||||||||||||||||||    
T  13748404 ttttctgatacgtatcgggaagtatcagataattattttaaaaaaaataaaatttaatcttcggatactcttctga 13748479  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 96; E-Value: 3e-47
Query Start/End: Original strand, 83 - 239
Target Start/End: Original strand, 30787436 - 30787594
Alignment:
Q  83 tactcaagagttaagttattttaattaacattaattgggaagtattggggcagatattggtgcatgataattatcggatactctcctgatacgtatcggg 182  Q
    ||||||||||||||||||||||| ||||||||||||||||||||| |||||||||||  |||||||||||||||||||||||||||||||| ||||||||    
T  30787436 tactcaagagttaagttattttagttaacattaattgggaagtatcggggcagatatcagtgcatgataattatcggatactctcctgatatgtatcggg 30787535  T
Q  183 aagtatcggataatta--nnnnnnnnaaaataaaatttaatcttcggatactcttctga 239  Q
    |||||| |||||||||          |||||||||||||||||||||||||||| ||||    
T  30787536 aagtataggataattattatttttttaaaataaaatttaatcttcggatactctcctga 30787594  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 92; E-Value: 8e-45
Query Start/End: Original strand, 83 - 239
Target Start/End: Complemental strand, 25701004 - 25700846
Alignment:
Q  83 tactcaagagttaagttattttaattaacattaattgggaagtattggggcagatattggtgcatgataattatcggatactctcctgatacgtatcggg 182  Q
    ||||||||||||||||||||||| | ||||||||||||||||||| |||||||| ||  ||||| |||||||||||||||||||||||||||||||||||    
T  25701004 tactcaagagttaagttattttagtaaacattaattgggaagtatcggggcagacatcagtgcaggataattatcggatactctcctgatacgtatcggg 25700905  T
Q  183 aagtatcggataatta--nnnnnnnnaaaataaaatttaatcttcggatactcttctga 239  Q
    ||||||||||||||||          |||||||||||||||||||||||||||| ||||    
T  25700904 aagtatcggataattattttaaaaataaaataaaatttaatcttcggatactctcctga 25700846  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 91; E-Value: 3e-44
Query Start/End: Original strand, 11 - 197
Target Start/End: Complemental strand, 2123024 - 2122838
Alignment:
Q  11 cataggtgttatactatatccaaaaggaacattgttagtgttatattatatcgatccaaaaaggaagcactatactcaagagttaagttattttaattaa 110  Q
    |||| |||||||| |||||||||||| || ||||||||| ||||| ||| | |||  ||||  |||||||||||||||||||||||||||||||| ||||    
T  2123024 cataagtgttatattatatccaaaagaaagattgttagtcttatactattttgattaaaaatagaagcactatactcaagagttaagttattttagttaa 2122925  T
Q  111 cattaattgggaagtattggggcagatattggtgcatgataattatcggatactctcctgatacgtatcgggaagtatcggataatt 197  Q
    |||||||||| |||||||| ||||| ||   ||||| ||||||||||||||| ||| ||||||||||||| |||||||| |||||||    
T  2122924 cattaattggaaagtattgaggcaggtaccagtgcaggataattatcggatagtctactgatacgtatcgcgaagtatcagataatt 2122838  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 90; E-Value: 1e-43
Query Start/End: Original strand, 83 - 239
Target Start/End: Complemental strand, 47642249 - 47642092
Alignment:
Q  83 tactcaagagttaagttattttaattaacattaattgggaagtattggggcagatattggtgcatgataattatcggatactctcctgatacgtatcggg 182  Q
    ||||||||||||||||||||||| |||||||||||||| |||||| |||||||||| | ||| | |||||| ||||||||||||||||||||||||||||    
T  47642249 tactcaagagttaagttattttagttaacattaattggaaagtatcggggcagatacttgtgtaggataatgatcggatactctcctgatacgtatcggg 47642150  T
Q  183 aagtatcggataatta-nnnnnnnnaaaataaaatttaatcttcggatactcttctga 239  Q
    ||||||| ||||||||         |||||||||||||||||||||||||||||||||    
T  47642149 aagtatcagataattatttttttataaaataaaatttaatcttcggatactcttctga 47642092  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 88; E-Value: 2e-42
Query Start/End: Original strand, 17 - 239
Target Start/End: Complemental strand, 28968842 - 28968596
Alignment:
Q  17 tgttatactatatccaaaaggaacattgttagtgttatattatatcgatccaaaaaggaagcactata----------------------ctcaagagtt 94  Q
    ||||||||||||||||||| |||||||||||||||||||||||||||||| ||||| ||| |||||||                      ||||||||||    
T  28968842 tgttatactatatccaaaatgaacattgttagtgttatattatatcgatctaaaaaagaaacactatattcaaaaaagaacacatcattactcaagagtt 28968743  T
Q  95 aagttattttaattaacattaattgggaagtattggggcagatattggtgcatgataattatcgga-tactctcctgatacgtatcgggaagtatcggat 193  Q
    ||||||||||| ||||||||||||||||||||| ||||||||||  | || | |||||| |||||| |||||||||||||||||||||||||||||||||    
T  28968742 aagttattttagttaacattaattgggaagtatcggggcagataccgatgtaggataatgatcggattactctcctgatacgtatcgggaagtatcggat 28968643  T
Q  194 aatta-nnnnnnnnaaaataaaatttaatcttcggatactcttctga 239  Q
    |||||         |||||||||||||||||||||||||||||||||    
T  28968642 aattattttttttaaaaataaaatttaatcttcggatactcttctga 28968596  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 86; E-Value: 3e-41
Query Start/End: Original strand, 82 - 234
Target Start/End: Original strand, 21157603 - 21157756
Alignment:
Q  82 atactcaagagttaagttattttaattaacattaattgggaagtattggggcagatattggtgcatgataattatcggatactctcctgatacgtatcgg 181  Q
    |||||| ||||||||||||||||||||||||||||||||||| ||| ||||||| ||  |||||| |||||||||| ||||||||||||||||||||| |    
T  21157603 atactcgagagttaagttattttaattaacattaattgggaactatcggggcaggtagcggtgcaggataattatcagatactctcctgatacgtatcag 21157702  T
Q  182 gaagtatcggataatta-nnnnnnnnaaaataaaatttaatcttcggatactct 234  Q
    |||||||||||||||||         ||||||||||||||||||||||||||||    
T  21157703 gaagtatcggataattattttttaaaaaaataaaatttaatcttcggatactct 21157756  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 84; E-Value: 5e-40
Query Start/End: Original strand, 83 - 239
Target Start/End: Original strand, 7899593 - 7899751
Alignment:
Q  83 tactcaagagttaagttattttaattaacattaattgggaagtattggggcagatattggtgcatgataattatcggatactctcctgatacgtatcggg 182  Q
    ||||||||||||||||||||||| ||||||||||||||||||||| |||||||||||  ||  | |||||| ||| |||||||||| |||||||||||||    
T  7899593 tactcaagagttaagttattttagttaacattaattgggaagtatcggggcagatatcagtataggataatgatcagatactctcccgatacgtatcggg 7899692  T
Q  183 aagtatcggataatta--nnnnnnnnaaaataaaatttaatcttcggatactcttctga 239  Q
    ||||||||||||||||          |||||||||||||||||||||||||||||||||    
T  7899693 aagtatcggataattatttttgtaaaaaaataaaatttaatcttcggatactcttctga 7899751  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 83 - 239
Target Start/End: Original strand, 55268891 - 55269048
Alignment:
Q  83 tactcaagagttaagttattttaattaacattaattgggaagtattggggcagatattggtgcatgataattatcggatactctcctgatacgtatcggg 182  Q
    ||||||||| ||||||||||||| |||||||||||||||||||||   |||||||||   |||| ||||||||||||||||| ||||||| |||||||||    
T  55268891 tactcaagacttaagttattttagttaacattaattgggaagtatcatggcagatatcaatgcaggataattatcggatactatcctgatgcgtatcggg 55268990  T
Q  183 aagtatcggataatta-nnnnnnnnaaaataaaatttaatcttcggatactcttctga 239  Q
    ||||||||||||||||         |||||||||||||||||||||||||||| ||||    
T  55268991 aagtatcggataattattttttaaaaaaataaaatttaatcttcggatactctcctga 55269048  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 85 - 239
Target Start/End: Complemental strand, 19421657 - 19421502
Alignment:
Q  85 ctcaagagttaagttattttaattaacattaattgggaagtattggggcagatattggtgcatgataattatcggatactctcctgatacgtatcgggaa 184  Q
    ||||||||||||||||||||  ||||||||||||||||| |||  |||||| ||| |||||| ||||||||||  |||| ||||||||||||||||||||    
T  19421657 ctcaagagttaagttattttggttaacattaattgggaaatatcagggcaggtatcggtgcaggataattatcatatacgctcctgatacgtatcgggaa 19421558  T
Q  185 gtatcggataatta-nnnnnnnnaaaataaaatttaatcttcggatactcttctga 239  Q
    ||||||||||||||         |||||||||||||||||||||||||||| ||||    
T  19421557 gtatcggataattactttttaaaaaaataaaatttaatcttcggatactctcctga 19421502  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 72; E-Value: 7e-33
Query Start/End: Original strand, 83 - 198
Target Start/End: Original strand, 38888961 - 38889076
Alignment:
Q  83 tactcaagagttaagttattttaattaacattaattgggaagtattggggcagatattggtgcatgataattatcggatactctcctgatacgtatcggg 182  Q
    ||||||||||||||||||||||| ||||||||||||| ||| ||| ||||||| |||| | ||| |||||||||||||||||||||||||||| ||||||    
T  38888961 tactcaagagttaagttattttagttaacattaattgagaaatatcggggcaggtattagagcaggataattatcggatactctcctgatacgcatcggg 38889060  T
Q  183 aagtatcggataatta 198  Q
    |||||||  |||||||    
T  38889061 aagtatcaaataatta 38889076  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 83 - 234
Target Start/End: Original strand, 19878977 - 19879130
Alignment:
Q  83 tactcaagagttaagttattttaattaacattaattgggaagtattgggg-cagatattggtgcatgataattatcggatactctcctgatacgtatcgg 181  Q
    ||||||||||||||||||||||| ||||||||||||||||| ||| |||| |||  |  |||||| ||||||||||| |||||||| |||||||||||||    
T  19878977 tactcaagagttaagttattttagttaacattaattgggaactatcgggggcaggcagcggtgcaggataattatcgaatactctcatgatacgtatcgg 19879076  T
Q  182 gaagtatcggataatta-nnnnnnnnaaaataaaatttaatcttcggatactct 234  Q
    |||||||||||||||||         ||||||||||| ||||||||||||||||    
T  19879077 gaagtatcggataattatttttttaaaaaataaaattgaatcttcggatactct 19879130  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 69; E-Value: 5e-31
Query Start/End: Original strand, 83 - 191
Target Start/End: Original strand, 45057176 - 45057284
Alignment:
Q  83 tactcaagagttaagttattttaattaacattaattgggaagtattggggcagatattggtgcatgataattatcggatactctcctgatacgtatcggg 182  Q
    ||||||||||||||||||||||| ||||||||||||||||| |||  ||||||||||  ||| | ||||||||||| |||||||| ||||||||||||||    
T  45057176 tactcaagagttaagttattttagttaacattaattgggaaatatcagggcagatatctgtgtaggataattatcgaatactctcatgatacgtatcggg 45057275  T
Q  183 aagtatcgg 191  Q
    |||||||||    
T  45057276 aagtatcgg 45057284  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 86 - 198
Target Start/End: Original strand, 20510034 - 20510146
Alignment:
Q  86 tcaagagttaagttattttaattaacattaattgggaagtattggggcagatattggtgcatgataattatcggatactctcctgatacgtatcgggaag 185  Q
    |||||||||||||||||||| | ||||||||||||||| ||||||||||| ||| | |||| ||||||||||| ||||| | |||||| |||||||||||    
T  20510034 tcaagagttaagttattttagtcaacattaattgggaaatattggggcaggtatcgatgcaggataattatcgaatacttttctgataagtatcgggaag 20510133  T
Q  186 tatcggataatta 198  Q
    |||| ||||||||    
T  20510134 tatcagataatta 20510146  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 11 - 105
Target Start/End: Complemental strand, 39664730 - 39664636
Alignment:
Q  11 cataggtgttatactatatccaaaaggaacattgttagtgttatattatatcgatccaaaaaggaagcactatactcaagagttaagttatttta 105  Q
    |||| ||| ||||||||||||||||| |||||||| ||||||||| |||||| || |||||| ||||||||||||||||||||||||||||||||    
T  39664730 cataagtgctatactatatccaaaagaaacattgtcagtgttatactatatcaatacaaaaaagaagcactatactcaagagttaagttatttta 39664636  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 83 - 239
Target Start/End: Original strand, 6134257 - 6134414
Alignment:
Q  83 tactcaagagttaagttattttaattaacattaattgggaagtattggggcagatattggtgcatgataattatcggatactctcctgatacgtatcggg 182  Q
    ||||||||||||||||||||||| | ||||||||||||||| ||   |||||  ||| | |||| ||||||||||| ||||||||||||||  |||||||    
T  6134257 tactcaagagttaagttattttagtcaacattaattgggaaataacagggcatgtatcgatgcaggataattatcgaatactctcctgataaatatcggg 6134356  T
Q  183 aagtatcggataatta-nnnnnnnnaaaataaaatttaatcttcggatactcttctga 239  Q
    ||||||||||||||||         ||||||| |||||||||||||||||||| ||||    
T  6134357 aagtatcggataattatttttttaaaaaataatatttaatcttcggatactctcctga 6134414  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 83 - 195
Target Start/End: Original strand, 13353070 - 13353182
Alignment:
Q  83 tactcaagagttaagttattttaattaacattaattgggaagtattggggcagatattggtgcatgataattatcggatactctcctgatacgtatcggg 182  Q
    ||||||||||||||||||||||| ||||||||||||  ||||||| || |  | ||| | |||| ||| |||||||||||||||||||||||||||||||    
T  13353070 tactcaagagttaagttattttagttaacattaattccgaagtatcggagtcgctatcgatgcaggattattatcggatactctcctgatacgtatcggg 13353169  T
Q  183 aagtatcggataa 195  Q
    ||||||| |||||    
T  13353170 aagtatcagataa 13353182  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 98 - 198
Target Start/End: Complemental strand, 39664183 - 39664084
Alignment:
Q  98 ttattttaattaacattaattgggaagtattggggcagatattggtgcatgataattatcggatactctcctgatacgtatcgggaagtatcggataatt 197  Q
    |||||||| ||||| ||||||||||| ||||||| ||| ||| | |||| ||||||||||||||||| |||||||||||||||||||||||| |||||||    
T  39664183 ttattttatttaacgttaattgggaattattggg-caggtatagatgcaggataattatcggatactttcctgatacgtatcgggaagtatcagataatt 39664085  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 17 - 84
Target Start/End: Complemental strand, 35390194 - 35390127
Alignment:
Q  17 tgttatactatatccaaaaggaacattgttagtgttatattatatcgatccaaaaaggaagcactata 84  Q
    ||||||||||||||||||||||||||||||| ||||||| |||||||||||||||| |||||||||||    
T  35390194 tgttatactatatccaaaaggaacattgttaatgttatactatatcgatccaaaaaagaagcactata 35390127  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 15 - 84
Target Start/End: Complemental strand, 52684660 - 52684591
Alignment:
Q  15 ggtgttatactatatccaaaaggaacattgttagtgttatattatatcgatccaaaaaggaagcactata 84  Q
    ||||||||||||||||||||| ||||||||||||||||||| |||||||||| ||||| |||||||||||    
T  52684660 ggtgttatactatatccaaaaagaacattgttagtgttatactatatcgatctaaaaaagaagcactata 52684591  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 17 - 84
Target Start/End: Complemental strand, 22311174 - 22311107
Alignment:
Q  17 tgttatactatatccaaaaggaacattgttagtgttatattatatcgatccaaaaaggaagcactata 84  Q
    ||||||||||||||||||||||||||||||| || |||| |||||||||||||||| |||||||||||    
T  22311174 tgttatactatatccaaaaggaacattgttaatgctatactatatcgatccaaaaaagaagcactata 22311107  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 19 - 84
Target Start/End: Original strand, 30787350 - 30787415
Alignment:
Q  19 ttatactatatccaaaaggaacattgttagtgttatattatatcgatccaaaaaggaagcactata 84  Q
    |||||||||||| ||||||||||||||||||| |||| |||||||||||||||| |||||||||||    
T  30787350 ttatactatatctaaaaggaacattgttagtgctatactatatcgatccaaaaaagaagcactata 30787415  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 83 - 163
Target Start/End: Complemental strand, 983429 - 983349
Alignment:
Q  83 tactcaagagttaagttattttaattaacattaattgggaagtattggggcagatattggtgcatgataattatcggatac 163  Q
    ||||||||||||||||| ||||| ||||||||||||||||| ||| ||||||||||  |||||| ||||||||| ||||||    
T  983429 tactcaagagttaagttgttttagttaacattaattgggaactatcggggcagatagcggtgcaggataattattggatac 983349  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 20 - 84
Target Start/End: Original strand, 20509946 - 20510010
Alignment:
Q  20 tatactatatccaaaaggaacattgttagtgttatattatatcgatccaaaaaggaagcactata 84  Q
    |||||||||||||||| ||||||||||||||||||| ||| |||||||||||| |||||||||||    
T  20509946 tatactatatccaaaatgaacattgttagtgttatactatgtcgatccaaaaaagaagcactata 20510010  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 15 - 84
Target Start/End: Original strand, 21006148 - 21006217
Alignment:
Q  15 ggtgttatactatatccaaaaggaacattgttagtgttatattatatcgatccaaaaaggaagcactata 84  Q
    |||| |||||||||||||||| ||||||||||||||||||| |||||||||| ||||| |||||| ||||    
T  21006148 ggtgctatactatatccaaaaagaacattgttagtgttatactatatcgatctaaaaaagaagcattata 21006217  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 19 - 72
Target Start/End: Complemental strand, 52121604 - 52121551
Alignment:
Q  19 ttatactatatccaaaaggaacattgttagtgttatattatatcgatccaaaaa 72  Q
    |||||||| ||||||||||||||||||||||| |||||||||||||||||||||    
T  52121604 ttatactacatccaaaaggaacattgttagtgctatattatatcgatccaaaaa 52121551  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 20 - 84
Target Start/End: Original strand, 13352985 - 13353049
Alignment:
Q  20 tatactatatccaaaaggaacattgttagtgttatattatatcgatccaaaaaggaagcactata 84  Q
    ||||||||||||||||||||||||||||||| |||| | | |||||||||||| |||||||||||    
T  13352985 tatactatatccaaaaggaacattgttagtgctatactgtgtcgatccaaaaaagaagcactata 13353049  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 16 - 72
Target Start/End: Complemental strand, 48333272 - 48333216
Alignment:
Q  16 gtgttatactatatccaaaaggaacattgttagtgttatattatatcgatccaaaaa 72  Q
    |||||||||||||||||||||||| |||||||||| |||| ||||||||||||||||    
T  48333272 gtgttatactatatccaaaaggaatattgttagtgctatactatatcgatccaaaaa 48333216  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 16 - 72
Target Start/End: Complemental strand, 48334215 - 48334159
Alignment:
Q  16 gtgttatactatatccaaaaggaacattgttagtgttatattatatcgatccaaaaa 72  Q
    |||||||||||||||||||| |||||||||||||| |||| ||||||||||||||||    
T  48334215 gtgttatactatatccaaaaagaacattgttagtgctatactatatcgatccaaaaa 48334159  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 17 - 76
Target Start/End: Complemental strand, 47642337 - 47642278
Alignment:
Q  17 tgttatactatatccaaaaggaacattgttagtgttatattatatcgatccaaaaaggaa 76  Q
    ||||||||||||||||||| ||||||||||||||||||| |||||||||| ||||| |||    
T  47642337 tgttatactatatccaaaaagaacattgttagtgttatactatatcgatctaaaaaagaa 47642278  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 15 - 84
Target Start/End: Original strand, 2567054 - 2567123
Alignment:
Q  15 ggtgttatactatatccaaaaggaacattgttagtgttatattatatcgatccaaaaaggaagcactata 84  Q
    |||| ||| |||||||||||| |||||||||  |||||||| |||||||||| |||||||||||||||||    
T  2567054 ggtgctatgctatatccaaaaagaacattgtatgtgttatactatatcgatctaaaaaggaagcactata 2567123  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 23 - 84
Target Start/End: Complemental strand, 7328062 - 7328002
Alignment:
Q  23 actatatccaaaaggaacattgttagtgttatattatatcgatccaaaaaggaagcactata 84  Q
    |||||||||||||||||| |||||||||||||| |||||||||||||||| ||| |||||||    
T  7328062 actatatccaaaaggaac-ttgttagtgttatactatatcgatccaaaaaagaatcactata 7328002  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 23 - 84
Target Start/End: Original strand, 22610557 - 22610617
Alignment:
Q  23 actatatccaaaaggaacattgttagtgttatattatatcgatccaaaaaggaagcactata 84  Q
    |||||||||||||||||| ||||||||| |||| |||||||||||||||| |||||||||||    
T  22610557 actatatccaaaaggaac-ttgttagtgctatactatatcgatccaaaaaagaagcactata 22610617  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 20 - 65
Target Start/End: Complemental strand, 25701091 - 25701046
Alignment:
Q  20 tatactatatccaaaaggaacattgttagtgttatattatatcgat 65  Q
    |||||||||||||||||||||||||||||||||||| |||||||||    
T  25701091 tatactatatccaaaaggaacattgttagtgttatactatatcgat 25701046  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 23 - 84
Target Start/End: Original strand, 25936359 - 25936419
Alignment:
Q  23 actatatccaaaaggaacattgttagtgttatattatatcgatccaaaaaggaagcactata 84  Q
    |||||||||||||||||| ||||||||| |||| |||||||||||||||| |||||||||||    
T  25936359 actatatccaaaaggaac-ttgttagtgctatactatatcgatccaaaaaagaagcactata 25936419  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 23 - 84
Target Start/End: Original strand, 45532343 - 45532403
Alignment:
Q  23 actatatccaaaaggaacattgttagtgttatattatatcgatccaaaaaggaagcactata 84  Q
    |||||||||||||||||| ||||||||| ||||||||||| ||||||||| |||||||||||    
T  45532343 actatatccaaaaggaac-ttgttagtgctatattatatcaatccaaaaaagaagcactata 45532403  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 20 - 72
Target Start/End: Original strand, 19878892 - 19878944
Alignment:
Q  20 tatactatatccaaaaggaacattgttagtgttatattatatcgatccaaaaa 72  Q
    |||| ||||||||||||||| |||||||||| |||||||||||||||||||||    
T  19878892 tataatatatccaaaaggaatattgttagtgatatattatatcgatccaaaaa 19878944  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 25 - 84
Target Start/End: Complemental strand, 19421739 - 19421680
Alignment:
Q  25 tatatccaaaaggaacattgttagtgttatattatatcgatccaaaaaggaagcactata 84  Q
    ||||| || |||||||||||||||||||||| ||||||||| |||||| |||||||||||    
T  19421739 tatattcataaggaacattgttagtgttatactatatcgattcaaaaaagaagcactata 19421680  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 17 - 84
Target Start/End: Original strand, 28882353 - 28882420
Alignment:
Q  17 tgttatactatatccaaaaggaacattgttagtgttatattatatcgatccaaaaaggaagcactata 84  Q
    |||||||||||||||||||| |||||||||| || |||| ||||||||||  |||| |||||||||||    
T  28882353 tgttatactatatccaaaagaaacattgttaatgctatactatatcgatcataaaaagaagcactata 28882420  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 17 - 84
Target Start/End: Original strand, 50287020 - 50287087
Alignment:
Q  17 tgttatactatatccaaaaggaacattgttagtgttatattatatcgatccaaaaaggaagcactata 84  Q
    ||||||||||||||||||||||||||| ||  || |||| |||||||||||||||| ||| |||||||    
T  50287020 tgttatactatatccaaaaggaacattattgatgctatactatatcgatccaaaaaagaaacactata 50287087  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 23 - 84
Target Start/End: Original strand, 37996571 - 37996631
Alignment:
Q  23 actatatccaaaaggaacattgttagtgttatattatatcgatccaaaaaggaagcactata 84  Q
    |||||||||||||||||| ||||||||| |||| |||||||||||||||| ||| |||||||    
T  37996571 actatatccaaaaggaac-ttgttagtgctatactatatcgatccaaaaaagaatcactata 37996631  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 23 - 72
Target Start/End: Original strand, 52505104 - 52505152
Alignment:
Q  23 actatatccaaaaggaacattgttagtgttatattatatcgatccaaaaa 72  Q
    |||||||||||||||||| |||||||||||||| ||||||||||||||||    
T  52505104 actatatccaaaaggaac-ttgttagtgttatactatatcgatccaaaaa 52505152  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 24 - 114
Target Start/End: Complemental strand, 28548348 - 28548256
Alignment:
Q  24 ctatatccaaaaggaacattgttagtgttatattatatcgatccaaaaaggaa-gcact-atactcaagagttaagttattttaattaacatt 114  Q
    |||||| ||||| |||||||||||||| |||  |||||||||||||||| |||  || | | |||||||||||||||||||||| ||||||||    
T  28548348 ctatattcaaaaagaacattgttagtgctatgctatatcgatccaaaaaagaacacattaagactcaagagttaagttattttagttaacatt 28548256  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 20 - 72
Target Start/End: Original strand, 45057091 - 45057143
Alignment:
Q  20 tatactatatccaaaaggaacattgttagtgttatattatatcgatccaaaaa 72  Q
    |||||||||| |||||| ||||||||||||||| || ||||||||||||||||    
T  45057091 tatactatatacaaaagaaacattgttagtgttgtactatatcgatccaaaaa 45057143  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #52
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 25 - 84
Target Start/End: Original strand, 10224442 - 10224500
Alignment:
Q  25 tatatccaaaaggaacattgttagtgttatattatatcgatccaaaaaggaagcactata 84  Q
    |||||||||||||||| |||||||||||||| || ||||||||||||| ||| |||||||    
T  10224442 tatatccaaaaggaac-ttgttagtgttatactaaatcgatccaaaaaagaatcactata 10224500  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #53
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 16 - 70
Target Start/End: Original strand, 7899505 - 7899559
Alignment:
Q  16 gtgttatactatatccaaaaggaacattgttagtgttatattatatcgatccaaa 70  Q
    ||||||||||| ||||||||| ||||||| ||||| |||| ||||||||||||||    
T  7899505 gtgttatactacatccaaaagaaacattgctagtgctatactatatcgatccaaa 7899559  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #54
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 156 - 189
Target Start/End: Complemental strand, 3983798 - 3983765
Alignment:
Q  156 tcggatactctcctgatacgtatcgggaagtatc 189  Q
    ||||||||||||||||||||||||||||||||||    
T  3983798 tcggatactctcctgatacgtatcgggaagtatc 3983765  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #55
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 156 - 189
Target Start/End: Complemental strand, 19421517 - 19421484
Alignment:
Q  156 tcggatactctcctgatacgtatcgggaagtatc 189  Q
    ||||||||||||||||||||||||||||||||||    
T  19421517 tcggatactctcctgatacgtatcgggaagtatc 19421484  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #56
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 156 - 189
Target Start/End: Original strand, 55269033 - 55269066
Alignment:
Q  156 tcggatactctcctgatacgtatcgggaagtatc 189  Q
    ||||||||||||||||||||||||||||||||||    
T  55269033 tcggatactctcctgatacgtatcgggaagtatc 55269066  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #57
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 19 - 55
Target Start/End: Original strand, 47750722 - 47750758
Alignment:
Q  19 ttatactatatccaaaaggaacattgttagtgttata 55  Q
    ||||||||||||||||||||| |||||||||||||||    
T  47750722 ttatactatatccaaaaggaatattgttagtgttata 47750758  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #58
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 82 - 177
Target Start/End: Complemental strand, 212750 - 212655
Alignment:
Q  82 atactcaagagttaagttattttaattaacattaattgggaagtattggggcagatattggtgcatgataattatcggatactctcctgatacgta 177  Q
    ||||||||||||||| | |||||| || ||||||||||  || ||  |||||||||||  ||| | ||||||||||||||| ||| || |||||||    
T  212750 atactcaagagttaaataattttagttgacattaattgaaaaataccggggcagatatatgtgtaggataattatcggatattcttctaatacgta 212655  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #59
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 158 - 189
Target Start/End: Complemental strand, 983293 - 983262
Alignment:
Q  158 ggatactctcctgatacgtatcgggaagtatc 189  Q
    ||||||||||||||||||||||||||||||||    
T  983293 ggatactctcctgatacgtatcgggaagtatc 983262  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #60
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 156 - 191
Target Start/End: Complemental strand, 28968611 - 28968576
Alignment:
Q  156 tcggatactctcctgatacgtatcgggaagtatcgg 191  Q
    ||||||||||| ||||||||||||||||||||||||    
T  28968611 tcggatactcttctgatacgtatcgggaagtatcgg 28968576  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #61
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 83 - 117
Target Start/End: Original strand, 2567144 - 2567178
Alignment:
Q  83 tactcaagagttaagttattttaattaacattaat 117  Q
    ||||||||||||||||||||||| |||||||||||    
T  2567144 tactcaagagttaagttattttagttaacattaat 2567178  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #62
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 17 - 47
Target Start/End: Original strand, 25322304 - 25322334
Alignment:
Q  17 tgttatactatatccaaaaggaacattgtta 47  Q
    |||||||||||||||||||||||||||||||    
T  25322304 tgttatactatatccaaaaggaacattgtta 25322334  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #63
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 23 - 89
Target Start/End: Complemental strand, 28705578 - 28705513
Alignment:
Q  23 actatatccaaaaggaacattgttagtgttatattatatcgatccaaaaaggaagcactatactcaa 89  Q
    ||||||||||||| |||| ||||||||| |||  |||||||||||||||| ||| ||||||| ||||    
T  28705578 actatatccaaaatgaac-ttgttagtgatattctatatcgatccaaaaaagaatcactatattcaa 28705513  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #64
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 158 - 191
Target Start/End: Original strand, 1679717 - 1679750
Alignment:
Q  158 ggatactctcctgatacgtatcgggaagtatcgg 191  Q
    ||||||||||| ||||||||||||||||||||||    
T  1679717 ggatactctccggatacgtatcgggaagtatcgg 1679750  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #65
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 156 - 189
Target Start/End: Complemental strand, 2122808 - 2122775
Alignment:
Q  156 tcggatactctcctgatacgtatcgggaagtatc 189  Q
    |||||| |||||||||||||||||||||||||||    
T  2122808 tcggattctctcctgatacgtatcgggaagtatc 2122775  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #66
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 156 - 189
Target Start/End: Original strand, 6134399 - 6134432
Alignment:
Q  156 tcggatactctcctgatacgtatcgggaagtatc 189  Q
    ||||||||||||||||||| ||||||||||||||    
T  6134399 tcggatactctcctgatacatatcgggaagtatc 6134432  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #67
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 156 - 189
Target Start/End: Original strand, 22289738 - 22289771
Alignment:
Q  156 tcggatactctcctgatacgtatcgggaagtatc 189  Q
    |||||||||||||||||||||||| |||||||||    
T  22289738 tcggatactctcctgatacgtatcaggaagtatc 22289771  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #68
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 158 - 191
Target Start/End: Complemental strand, 33240049 - 33240016
Alignment:
Q  158 ggatactctcctgatacgtatcgggaagtatcgg 191  Q
    ||||||||||| ||||||||||||||||||||||    
T  33240049 ggatactctcccgatacgtatcgggaagtatcgg 33240016  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #69
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 158 - 191
Target Start/End: Complemental strand, 35389849 - 35389816
Alignment:
Q  158 ggatactctcctgatacgtatcgggaagtatcgg 191  Q
    ||||||||||| ||||||||||||||||||||||    
T  35389849 ggatactctcccgatacgtatcgggaagtatcgg 35389816  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #70
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 158 - 191
Target Start/End: Complemental strand, 40497429 - 40497396
Alignment:
Q  158 ggatactctcctgatacgtatcgggaagtatcgg 191  Q
    ||||||||||| ||||||||||||||||||||||    
T  40497429 ggatactctccggatacgtatcgggaagtatcgg 40497396  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #71
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 150 - 191
Target Start/End: Complemental strand, 42229781 - 42229740
Alignment:
Q  150 taattatcggatactctcctgatacgtatcgggaagtatcgg 191  Q
    ||||| ||||||||||| |||||||||||| |||||||||||    
T  42229781 taattttcggatactcttctgatacgtatcaggaagtatcgg 42229740  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #72
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 23 - 84
Target Start/End: Complemental strand, 48123662 - 48123602
Alignment:
Q  23 actatatccaaaaggaacattgttagtgttatattatatcgatccaaaaaggaagcactata 84  Q
    |||||||||||||||||| ||||| |||||||| ||| ||||| |||||| ||| |||||||    
T  48123662 actatatccaaaaggaac-ttgtttgtgttatactatgtcgattcaaaaaagaatcactata 48123602  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #73
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 207 - 239
Target Start/End: Complemental strand, 3983815 - 3983783
Alignment:
Q  207 aaaataaaatttaatcttcggatactcttctga 239  Q
    |||||||||||||||||||||||||||| ||||    
T  3983815 aaaataaaatttaatcttcggatactctcctga 3983783  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #74
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 157 - 185
Target Start/End: Complemental strand, 5271569 - 5271541
Alignment:
Q  157 cggatactctcctgatacgtatcgggaag 185  Q
    |||||||||||||||||||||||||||||    
T  5271569 cggatactctcctgatacgtatcgggaag 5271541  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #75
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 156 - 192
Target Start/End: Complemental strand, 52684302 - 52684266
Alignment:
Q  156 tcggatactctcctgatacgtatcgggaagtatcgga 192  Q
    |||||||||||||| ||||||||||| ||||||||||    
T  52684302 tcggatactctcctaatacgtatcggaaagtatcgga 52684266  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 130; Significance: 2e-67; HSPs: 66)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 130; E-Value: 2e-67
Query Start/End: Original strand, 11 - 239
Target Start/End: Complemental strand, 9781957 - 9781728
Alignment:
Q  11 cataggtgttatactatatccaaaaggaacattgttagtgttatattatatcgatccaaaaaggaagcactatactcaagagttaagttattttaattaa 110  Q
    |||| ||| ||||||||||||||||| ||||||||||||| |||| | |||||||||||||| |||||||| ||||||||||||||||||||||| ||||    
T  9781957 cataagtgctatactatatccaaaagaaacattgttagtgctatactgtatcgatccaaaaaagaagcactgtactcaagagttaagttattttatttaa 9781858  T
Q  111 cattaattgggaagtattggggcagatattggtgcatgataattatcggatactctcctgatacgtatcgggaagtatcggataatta-nnnnnnnnaaa 209  Q
    | ||||||||||| ||||||||||| ||| |||||| ||||||||||||||||| |||||||||||||||||||||||||||||||||         |||    
T  9781857 cgttaattgggaattattggggcaggtataggtgcaggataattatcggatactttcctgatacgtatcgggaagtatcggataattattttaaaaaaaa 9781758  T
Q  210 ataaaatttaatcttcggatactcttctga 239  Q
    | |||| |||||||||||||||||||||||    
T  9781757 aaaaaaattaatcttcggatactcttctga 9781728  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 120; E-Value: 2e-61
Query Start/End: Original strand, 20 - 239
Target Start/End: Original strand, 34096365 - 34096584
Alignment:
Q  20 tatactatatccaaaaggaacattgttagtgttatattatatcgatccaaaaaggaagcactatactcaagagttaagttattttaattaacattaattg 119  Q
    ||||||||||| ||||| ||||||||||||| |||| |||||||||| ||||| |||||||||||||| ||||||||||||||||| ||||| |||||||    
T  34096365 tatactatatctaaaagaaacattgttagtgctatactatatcgatctaaaaaagaagcactatactcgagagttaagttattttatttaacgttaattg 34096464  T
Q  120 ggaagtattggggcagatattggtgcatgataattatcggatactctcctgatacgtatcgggaagtatcggataattannnnnnnnaaaataaaattta 219  Q
     ||| ||||||||||| ||| |||||| ||||||||| ||||||| |||||||||||||||||||||||||||||||||        |||| ||| ||||    
T  34096465 agaattattggggcaggtataggtgcaggataattattggatactttcctgatacgtatcgggaagtatcggataattatttaaaaaaaaaaaaagttta 34096564  T
Q  220 atcttcggatactcttctga 239  Q
    |||||| |||||||||||||    
T  34096565 atcttcagatactcttctga 34096584  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 119; E-Value: 7e-61
Query Start/End: Original strand, 20 - 198
Target Start/End: Complemental strand, 29862103 - 29861925
Alignment:
Q  20 tatactatatccaaaaggaacattgttagtgttatattatatcgatccaaaaaggaagcactatactcaagagttaagttattttaattaacattaattg 119  Q
    ||||||||||||||||| ||||||||||||| |||| | |||| ||||||||| |||||||||||||||||||||||||||||||| ||||| |||||||    
T  29862103 tatactatatccaaaagaaacattgttagtggtatactttatcaatccaaaaaagaagcactatactcaagagttaagttattttatttaacgttaattg 29862004  T
Q  120 ggaagtattggggcagatattggtgcatgataattatcggatactctcctgatacgtatcgggaagtatcggataatta 198  Q
    |||| ||||||| ||| ||| |||||| ||||||||||||||||| ||||||||||||||| |||||||||||||||||    
T  29862003 ggaattattgggacaggtataggtgcaggataattatcggatactttcctgatacgtatcgagaagtatcggataatta 29861925  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 112; E-Value: 1e-56
Query Start/End: Original strand, 11 - 198
Target Start/End: Original strand, 9528647 - 9528833
Alignment:
Q  11 cataggtgttatactatatccaaaaggaacattgttagtgttatattatatcgatccaaaaaggaagcactatactcaagagttaagttattttaattaa 110  Q
    |||| ||| ||||||||||||||||| ||||| ||||||| |||| |||||||||||||||| |||||||||||||||| ||||||||||||||| ||||    
T  9528647 cataagtgctatactatatccaaaagaaacatcgttagtgctatactatatcgatccaaaaaagaagcactatactcaa-agttaagttattttagttaa 9528745  T
Q  111 cattaattgggaagtattggggcagatattggtgcatgataattatcggatactctcctgatacgtatcgggaagtatcggataatta 198  Q
    ||||||||  ||||||||||||||| |||  |||||  ||||||||||||||||||||| ||||||||||||||||||| ||||||||    
T  9528746 cattaattaagaagtattggggcaggtatctgtgcagaataattatcggatactctcctaatacgtatcgggaagtatcagataatta 9528833  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 106; E-Value: 4e-53
Query Start/End: Original strand, 11 - 239
Target Start/End: Complemental strand, 29168262 - 29168033
Alignment:
Q  11 cataggtgttatactatatccaaaaggaacattgttagtgttatattatatcgatccaaaaaggaagcactatactcaagagttaagttattttaattaa 110  Q
    |||| ||| ||||||||||||||||| ||||||||||||  |||| ||||| |||||||||| |||||| ||||||||| ||||||||||||||| ||||    
T  29168262 cataagtgatatactatatccaaaagaaacattgttagtactatactatattgatccaaaaaagaagcattatactcaatagttaagttattttagttaa 29168163  T
Q  111 cattaattgggaagtattggggcagatattggtgcatgataattatcggatactctcctgatacgtatcgggaagtatcggataatta-nnnnnnnnaaa 209  Q
     ||||||||||||||||||||| || |||  ||||| ||||||||| || ||||||||| ||||||||||||||||||| ||||||||         |||    
T  29168162 tattaattgggaagtattggggtaggtatcagtgcaggataattattgggtactctcctcatacgtatcgggaagtatcagataattattttttaaaaaa 29168063  T
Q  210 ataaaatttaatcttcggatactcttctga 239  Q
    || |||||||||||||||||||||| ||||    
T  29168062 attaaatttaatcttcggatactctcctga 29168033  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 102; E-Value: 9e-51
Query Start/End: Original strand, 20 - 181
Target Start/End: Complemental strand, 10822700 - 10822539
Alignment:
Q  20 tatactatatccaaaaggaacattgttagtgttatattatatcgatccaaaaaggaagcactatactcaagagttaagttattttaattaacattaattg 119  Q
    ||||||||||||||||| ||||||||||||| ||||||||||||||||||||| |||||| ||||||||||||||||||||||||||||||||| |||||    
T  10822700 tatactatatccaaaagaaacattgttagtgatatattatatcgatccaaaaaagaagcattatactcaagagttaagttattttaattaacatcaattg 10822601  T
Q  120 ggaagtattggggcagatattggtgcatgataattatcggatactctcctgatacgtatcgg 181  Q
     ||||||||||||||| ||| | |  | ||||||||||||||| |||  |||||||||||||    
T  10822600 agaagtattggggcaggtatcgatcaaggataattatcggatattcttgtgatacgtatcgg 10822539  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 100; E-Value: 1e-49
Query Start/End: Original strand, 11 - 239
Target Start/End: Complemental strand, 10763968 - 10763745
Alignment:
Q  11 cataggtgttatactatatccaaaaggaacattgttagtgttatattatatcgatccaaaaaggaagcactatactcaagagttaagttattttaattaa 110  Q
    |||| ||| ||| ||||||||||||| |||||| |||||| |||| |||||||||| ||||| ||||||| ||||||| |||||||||||||||| ||||    
T  10763968 cataagtgatattctatatccaaaagaaacatttttagtgctatactatatcgatctaaaaaagaagcaccatactcaggagttaagttattttatttaa 10763869  T
Q  111 cattaattgggaagtattggggcagatattggtgcatgataattatcggatactctcctgatacgtatcgggaagtatcggataattannnnnnnnaaaa 210  Q
    | ||||||||||| ||||||||||| ||| |||||| |||||||||| |||||| | |||||||||| | ||||||||||||||||||        ||||    
T  10763868 cgttaattgggaattattggggcaggtataggtgcaggataattatcagatacttttctgatacgta-ccggaagtatcggataatta----tttaaaaa 10763774  T
Q  211 taaaatttaatcttcggatactcttctga 239  Q
     |||| |||||||||||||||||||||||    
T  10763773 aaaaaattaatcttcggatactcttctga 10763745  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 82 - 239
Target Start/End: Complemental strand, 38218627 - 38218469
Alignment:
Q  82 atactcaagagttaagttattttaattaacattaattgggaagtattggggcagatattggtgcatgataattatcggatactctcctgatacgtatcgg 181  Q
    ||||||||||||||||||||||||  ||| |||||||||||||||| |||||||||| ||||| | |||||| ||||||||||||||| ||| |||||||    
T  38218627 atactcaagagttaagttattttagctaatattaattgggaagtatcggggcagatactggtgtaggataatgatcggatactctcctaatatgtatcgg 38218528  T
Q  182 gaagtatcggataatta-nnnnnnnnaaaataaaatttaatcttcggatactcttctga 239  Q
    ||||||||| |||||||         |||||||||||||||||||||||||||||||||    
T  38218527 gaagtatcgaataattattttttaaaaaaataaaatttaatcttcggatactcttctga 38218469  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 83 - 236
Target Start/End: Original strand, 41675865 - 41676018
Alignment:
Q  83 tactcaagagttaagttattttaattaacattaattgggaagtattggggcagatattggtgcatgataattatcggatactctcctgatacgtatcggg 182  Q
    |||||||||||||||||||||||||||||||||||||||| |||| ||||||||||  |||| | |||||| ||||||||||||||||||| ||||||||    
T  41675865 tactcaagagttaagttattttaattaacattaattggga-gtatcggggcagataccggtgtaggataatgatcggatactctcctgataagtatcggg 41675963  T
Q  183 aagtatcggataatta-nnnnnnnnaaaataaaatttaatcttcggatactcttc 236  Q
    |||||| |||||||||         ||||||||||||||||||||||||||||||    
T  41675964 aagtattggataattattttttaaaaaaataaaatttaatcttcggatactcttc 41676018  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 72; E-Value: 7e-33
Query Start/End: Original strand, 83 - 234
Target Start/End: Complemental strand, 24851713 - 24851565
Alignment:
Q  83 tactcaagagttaagttattttaattaacattaattgggaagtattggggcagatattggtgcatgataattatcggatactctcctgatacgtatcggg 182  Q
    ||||||||||||||||||||||| |||||||||||||| || ||| ||||||| ||| ||||    |||||||||||||||||||||||| |||||||||    
T  24851713 tactcaagagttaagttattttagttaacattaattggaaaatatcggggcaggtatgggtg----ataattatcggatactctcctgatgcgtatcggg 24851618  T
Q  183 aagtatcggataatta-nnnnnnnnaaaataaaatttaatcttcggatactct 234  Q
    ||||||||||||||||         |||||||||||||||||| |||||||||    
T  24851617 aagtatcggataattattttttaaaaaaataaaatttaatctttggatactct 24851565  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 83 - 198
Target Start/End: Original strand, 24589999 - 24590114
Alignment:
Q  83 tactcaagagttaagttattttaattaacattaattgggaagtattggggcagatattggtgcatgataattatcggatactctcctgatacgtatcggg 182  Q
    ||||||||||||||||||||||| ||||||||||||||||||||| ||| ||  ||| |||| | |||||| ||||||||||||| ||||| ||||||||    
T  24589999 tactcaagagttaagttattttagttaacattaattgggaagtatcgggacatgtatcggtgtaggataatgatcggatactctcttgatatgtatcggg 24590098  T
Q  183 aagtatcggataatta 198  Q
    ||||||| ||||||||    
T  24590099 aagtatcagataatta 24590114  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 67; E-Value: 7e-30
Query Start/End: Original strand, 83 - 189
Target Start/End: Original strand, 2472798 - 2472904
Alignment:
Q  83 tactcaagagttaagttattttaattaacattaattgggaagtattggggcagatattggtgcatgataattatcggatactctcctgatacgtatcggg 182  Q
    ||||||||||||||||||||||| ||||||||||||||||| ||| ||||||| | |  ||||  ||||||||||||||||||||||||||||||||||     
T  2472798 tactcaagagttaagttattttagttaacattaattgggaaatatcggggcaggtgtcagtgctggataattatcggatactctcctgatacgtatcgga 2472897  T
Q  183 aagtatc 189  Q
    |||||||    
T  2472898 aagtatc 2472904  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 83 - 198
Target Start/End: Complemental strand, 33039853 - 33039740
Alignment:
Q  83 tactcaagagttaagttattttaattaacattaattgggaagtat--tggggcagatattggtgcatgataattatcggatactctcctgatacgtatcg 180  Q
    ||||||||||||||||||||||| ||||||||||||||||| |||  |||||||  |    | |||||||||||||||||||||||||| ||||||||||    
T  33039853 tactcaagagttaagttattttagttaacattaattgggaaatatattggggcaact----gcgcatgataattatcggatactctcctcatacgtatcg 33039758  T
Q  181 ggaagtatcggataatta 198  Q
    ||||||||||||||||||    
T  33039757 ggaagtatcggataatta 33039740  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 20 - 103
Target Start/End: Original strand, 34432227 - 34432310
Alignment:
Q  20 tatactatatccaaaaggaacattgttagtgttatattatatcgatccaaaaaggaagcactatactcaagagttaagttattt 103  Q
    |||||||||||| |||| |||||||||||||||||| |||||||||||||||| |||||||||||||| |||||||||||||||    
T  34432227 tatactatatcccaaagaaacattgttagtgttatactatatcgatccaaaaaagaagcactatactcgagagttaagttattt 34432310  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 83 - 175
Target Start/End: Complemental strand, 36551627 - 36551535
Alignment:
Q  83 tactcaagagttaagttattttaattaacattaattgggaagtattggggcagatattggtgcatgataattatcggatactctcctgatacg 175  Q
    ||||||||||||||||||||||| ||||||||||||||||||||| ||||||||||| | |  | |||||| |||||||||||||||||||||    
T  36551627 tactcaagagttaagttattttagttaacattaattgggaagtatcggggcagatatcgatataggataatgatcggatactctcctgatacg 36551535  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 20 - 84
Target Start/End: Complemental strand, 43190085 - 43190021
Alignment:
Q  20 tatactatatccaaaaggaacattgttagtgttatattatatcgatccaaaaaggaagcactata 84  Q
    ||||||||||||||||||||||||||||||| |||| |||||||||||||||| |||||||||||    
T  43190085 tatactatatccaaaaggaacattgttagtgctatactatatcgatccaaaaaagaagcactata 43190021  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 17 - 84
Target Start/End: Original strand, 13012663 - 13012730
Alignment:
Q  17 tgttatactatatccaaaaggaacattgttagtgttatattatatcgatccaaaaaggaagcactata 84  Q
    |||||||||||||| ||||||||||||| ||||| ||||||||||||||||||||| |||||||||||    
T  13012663 tgttatactatatctaaaaggaacattgctagtgctatattatatcgatccaaaaaagaagcactata 13012730  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 125 - 198
Target Start/End: Original strand, 3708196 - 3708269
Alignment:
Q  125 tattggggcagatattggtgcatgataattatcggatactctcctgatacgtatcgggaagtatcggataatta 198  Q
    ||||||||||  |||||||||| ||||||||| ||||||||||||||||||||||| ||||||||| |||||||    
T  3708196 tattggggcaagtattggtgcaagataattattggatactctcctgatacgtatcgagaagtatcgaataatta 3708269  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 16 - 84
Target Start/End: Complemental strand, 36551716 - 36551648
Alignment:
Q  16 gtgttatactatatccaaaaggaacattgttagtgttatattatatcgatccaaaaaggaagcactata 84  Q
    |||||||| ||||||||||||||||||||||||||||||| |||||||||| ||||| ||| |||||||    
T  36551716 gtgttatattatatccaaaaggaacattgttagtgttatactatatcgatctaaaaaagaaacactata 36551648  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 20 - 84
Target Start/End: Complemental strand, 47654992 - 47654928
Alignment:
Q  20 tatactatatccaaaaggaacattgttagtgttatattatatcgatccaaaaaggaagcactata 84  Q
    |||| ||||||||||| ||||||||||||||||||| |||||||||||||||| |||||||||||    
T  47654992 tatattatatccaaaatgaacattgttagtgttatactatatcgatccaaaaaagaagcactata 47654928  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 20 - 100
Target Start/End: Complemental strand, 14167375 - 14167291
Alignment:
Q  20 tatactatatccaaaaggaacattgttagtgttatattatatcgatccaaaaaggaagc----actatactcaagagttaagtta 100  Q
    |||||||||||||||||  ||||||||||||||||| ||||||||||||| || |||||    ||||||||||||||||||||||    
T  14167375 tatactatatccaaaagatacattgttagtgttatactatatcgatccaagaaagaagcaccaactatactcaagagttaagtta 14167291  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 83 - 198
Target Start/End: Complemental strand, 47654907 - 47654792
Alignment:
Q  83 tactcaagagttaagttattttaattaacattaattgggaagtattggggcagatattggtgcatgataattatcggatactctcctgatacgtatcggg 182  Q
    ||||||||||||||||| ||||| | |||||||||||| || ||| ||||||| ||| |||| | ||||||||||| ||||| | |||||| ||||  ||    
T  47654907 tactcaagagttaagtttttttagtcaacattaattggaaaatatcggggcaggtatcggtgtaggataattatcgaatactattctgataagtatgagg 47654808  T
Q  183 aagtatcggataatta 198  Q
    | ||||||||||||||    
T  47654807 atgtatcggataatta 47654792  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 117 - 239
Target Start/End: Original strand, 48715134 - 48715257
Alignment:
Q  117 ttgggaagtattggggcagatattggtgcatgataattatcggatactctcctgatacgtatcgggaagtatcggataattannnnnnnnaa-aataaaa 215  Q
    ||||||||||| |||| ||||||  || ||||||||||||| ||||||||| ||||| ||||||||||||||| ||||||||        || |||||||    
T  48715134 ttgggaagtatcggggaagatatcagtacatgataattatcagatactctcttgatatgtatcgggaagtatctgataattattttttaaaacaataaaa 48715233  T
Q  216 tttaatcttcggatactcttctga 239  Q
    ||||||||||||| ||||| ||||    
T  48715234 tttaatcttcggacactctcctga 48715257  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 20 - 80
Target Start/End: Complemental strand, 14334599 - 14334539
Alignment:
Q  20 tatactatatccaaaaggaacattgttagtgttatattatatcgatccaaaaaggaagcac 80  Q
    ||||||||||||||||| ||||||||||||| |||| |||||||||||||||| |||||||    
T  14334599 tatactatatccaaaagaaacattgttagtgctatactatatcgatccaaaaaagaagcac 14334539  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 20 - 84
Target Start/End: Complemental strand, 24851798 - 24851734
Alignment:
Q  20 tatactatatccaaaaggaacattgttagtgttatattatatcgatccaaaaaggaagcactata 84  Q
    |||||||||||||||| |||||||||||||| |||| |||||||||||||||| ||| |||||||    
T  24851798 tatactatatccaaaacgaacattgttagtgctatactatatcgatccaaaaaagaatcactata 24851734  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 20 - 84
Target Start/End: Original strand, 31653092 - 31653156
Alignment:
Q  20 tatactatatccaaaaggaacattgttagtgttatattatatcgatccaaaaaggaagcactata 84  Q
    |||||||||||||||||||| ||||||| || |||| |||||||||||||||| |||||||||||    
T  31653092 tatactatatccaaaaggaaaattgttaatgctatactatatcgatccaaaaaagaagcactata 31653156  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 16 - 72
Target Start/End: Complemental strand, 38218713 - 38218657
Alignment:
Q  16 gtgttatactatatccaaaaggaacattgttagtgttatattatatcgatccaaaaa 72  Q
    |||||||| |||||||||||| ||||||||||||||||||||||||||||| |||||    
T  38218713 gtgttatattatatccaaaagtaacattgttagtgttatattatatcgatctaaaaa 38218657  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 20 - 89
Target Start/End: Original strand, 24589913 - 24589982
Alignment:
Q  20 tatactatatccaaaaggaacattgttagtgttatattatatcgatccaaaaaggaagcactatactcaa 89  Q
    |||| ||||| ||||| ||||||||||||||||||| |||||||||||||||| ||| ||||||| ||||    
T  24589913 tatattatattcaaaaagaacattgttagtgttatactatatcgatccaaaaaagaaacactatattcaa 24589982  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 23 - 84
Target Start/End: Complemental strand, 25257442 - 25257382
Alignment:
Q  23 actatatccaaaaggaacattgttagtgttatattatatcgatccaaaaaggaagcactata 84  Q
    |||||||||||||||||| ||||||||| |||| |||||||||||||||| |||||||||||    
T  25257442 actatatccaaaaggaac-ttgttagtgctatactatatcgatccaaaaaagaagcactata 25257382  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 23 - 84
Target Start/End: Original strand, 28658684 - 28658744
Alignment:
Q  23 actatatccaaaaggaacattgttagtgttatattatatcgatccaaaaaggaagcactata 84  Q
    |||||||||||||||||| ||||||||| |||| |||||||||||||||| |||||||||||    
T  28658684 actatatccaaaaggaac-ttgttagtgctatactatatcgatccaaaaaagaagcactata 28658744  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 23 - 84
Target Start/End: Original strand, 28948489 - 28948549
Alignment:
Q  23 actatatccaaaaggaacattgttagtgttatattatatcgatccaaaaaggaagcactata 84  Q
    |||||||||||||||||| |||||||||||||| |||||||||||||||| ||| |||||||    
T  28948489 actatatccaaaaggaac-ttgttagtgttatactatatcgatccaaaaaagaatcactata 28948549  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 16 - 84
Target Start/End: Original strand, 32380866 - 32380934
Alignment:
Q  16 gtgttatactatatccaaaaggaacattgttagtgttatattatatcgatccaaaaaggaagcactata 84  Q
    |||||||||||||| ||||||||||||||||||||||||| |||||  || |||||| |||||| ||||    
T  32380866 gtgttatactatattcaaaaggaacattgttagtgttatactatatttattcaaaaaagaagcattata 32380934  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 23 - 84
Target Start/End: Complemental strand, 5985012 - 5984952
Alignment:
Q  23 actatatccaaaaggaacattgttagtgttatattatatcgatccaaaaaggaagcactata 84  Q
    |||||||||||||||||| |||| |||| |||| |||||||||||||||| |||||||||||    
T  5985012 actatatccaaaaggaac-ttgtcagtgctatactatatcgatccaaaaaagaagcactata 5984952  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 23 - 84
Target Start/End: Complemental strand, 30324545 - 30324485
Alignment:
Q  23 actatatccaaaaggaacattgttagtgttatattatatcgatccaaaaaggaagcactata 84  Q
    |||||||||||||||||  ||||||||| |||| |||||||||||||||| |||||||||||    
T  30324545 actatatccaaaaggaat-ttgttagtgctatactatatcgatccaaaaaagaagcactata 30324485  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 23 - 84
Target Start/End: Original strand, 36363336 - 36363396
Alignment:
Q  23 actatatccaaaaggaacattgttagtgttatattatatcgatccaaaaaggaagcactata 84  Q
    |||||||||||||||||| ||||||||| |||| |||||||||||||||| ||| |||||||    
T  36363336 actatatccaaaaggaac-ttgttagtgctatactatatcgatccaaaaaagaatcactata 36363396  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 23 - 84
Target Start/End: Original strand, 36367460 - 36367520
Alignment:
Q  23 actatatccaaaaggaacattgttagtgttatattatatcgatccaaaaaggaagcactata 84  Q
    |||||||||||||||||| ||||||||| |||| |||||||||||||||| ||| |||||||    
T  36367460 actatatccaaaaggaac-ttgttagtgctatactatatcgatccaaaaaagaatcactata 36367520  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 89 - 181
Target Start/End: Original strand, 32380962 - 32381042
Alignment:
Q  89 agagttaagttattttaattaacattaattgggaagtattggggcagatattggtgcatgataattatcggatactctcctgatacgtatcgg 181  Q
    ||||||||||||||||| |||||||||| ||||||||||  |||||||            |||||||||||||||||||||||||||||||||    
T  32380962 agagttaagttattttagttaacattaaatgggaagtatcagggcaga------------ataattatcggatactctcctgatacgtatcgg 32381042  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 23 - 84
Target Start/End: Original strand, 6916144 - 6916204
Alignment:
Q  23 actatatccaaaaggaacattgttagtgttatattatatcgatccaaaaaggaagcactata 84  Q
    ||||||||||||| |||| ||||||||| |||| |||||||||||||||| ||| |||||||    
T  6916144 actatatccaaaatgaac-ttgttagtgatatactatatcgatccaaaaaagaatcactata 6916204  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 23 - 84
Target Start/End: Complemental strand, 37104476 - 37104416
Alignment:
Q  23 actatatccaaaaggaacattgttagtgttatattatatcgatccaaaaaggaagcactata 84  Q
    |||||||||||||| ||| ||||||||| |||| |||||||||||||||| ||| |||||||    
T  37104476 actatatccaaaagaaac-ttgttagtgctatactatatcgatccaaaaaagaatcactata 37104416  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 23 - 84
Target Start/End: Complemental strand, 38331275 - 38331215
Alignment:
Q  23 actatatccaaaaggaacattgttagtgttatattatatcgatccaaaaaggaagcactata 84  Q
    ||||||||||||| |||| ||||||||| |||| |||||||||||||||| ||| |||||||    
T  38331275 actatatccaaaatgaac-ttgttagtgatatactatatcgatccaaaaaagaatcactata 38331215  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 17 - 66
Target Start/End: Original strand, 41675777 - 41675826
Alignment:
Q  17 tgttatactatatccaaaaggaacattgttagtgttatattatatcgatc 66  Q
    |||||||||||||| ||||| |||||||||| ||||||| ||||||||||    
T  41675777 tgttatactatatctaaaagcaacattgttaatgttatactatatcgatc 41675826  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 207 - 239
Target Start/End: Complemental strand, 2364795 - 2364763
Alignment:
Q  207 aaaataaaatttaatcttcggatactcttctga 239  Q
    |||||||||||||||||||||||||||||||||    
T  2364795 aaaataaaatttaatcttcggatactcttctga 2364763  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 207 - 239
Target Start/End: Complemental strand, 14167202 - 14167170
Alignment:
Q  207 aaaataaaatttaatcttcggatactcttctga 239  Q
    |||||||||||||||||||||||||||||||||    
T  14167202 aaaataaaatttaatcttcggatactcttctga 14167170  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 17 - 53
Target Start/End: Complemental strand, 15417725 - 15417689
Alignment:
Q  17 tgttatactatatccaaaaggaacattgttagtgtta 53  Q
    |||||||||||||| ||||||||||||||||||||||    
T  15417725 tgttatactatatcaaaaaggaacattgttagtgtta 15417689  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 156 - 191
Target Start/End: Original strand, 48715242 - 48715277
Alignment:
Q  156 tcggatactctcctgatacgtatcgggaagtatcgg 191  Q
    ||||| ||||||||||||||||||||||||||||||    
T  48715242 tcggacactctcctgatacgtatcgggaagtatcgg 48715277  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 42 - 84
Target Start/End: Complemental strand, 3427664 - 3427622
Alignment:
Q  42 ttgttagtgttatattatatcgatccaaaaaggaagcactata 84  Q
    |||||||||||||| |||||||||||||||| ||| |||||||    
T  3427664 ttgttagtgttatactatatcgatccaaaaaagaatcactata 3427622  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 23 - 89
Target Start/End: Complemental strand, 8133008 - 8132943
Alignment:
Q  23 actatatccaaaaggaacattgttagtgttatattatatcgatccaaaaaggaagcactatactcaa 89  Q
    ||||||||||||| |||| ||||||||| |||  |||||||||||||||| ||| ||||||| ||||    
T  8133008 actatatccaaaatgaac-ttgttagtgatattctatatcgatccaaaaaagaatcactatattcaa 8132943  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #48
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 20 - 62
Target Start/End: Complemental strand, 37922520 - 37922478
Alignment:
Q  20 tatactatatccaaaaggaacattgttagtgttatattatatc 62  Q
    ||||||||||||||||| ||||||||||||| |||| ||||||    
T  37922520 tatactatatccaaaagaaacattgttagtgctatactatatc 37922478  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #49
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 158 - 191
Target Start/End: Complemental strand, 1043326 - 1043293
Alignment:
Q  158 ggatactctcctgatacgtatcgggaagtatcgg 191  Q
    ||||||||||| ||||||||||||||||||||||    
T  1043326 ggatactctccggatacgtatcgggaagtatcgg 1043293  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #50
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 158 - 191
Target Start/End: Original strand, 13013011 - 13013044
Alignment:
Q  158 ggatactctcctgatacgtatcgggaagtatcgg 191  Q
    ||||||||||| ||||||||||||||||||||||    
T  13013011 ggatactctcccgatacgtatcgggaagtatcgg 13013044  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #51
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 158 - 191
Target Start/End: Original strand, 20409573 - 20409606
Alignment:
Q  158 ggatactctcctgatacgtatcgggaagtatcgg 191  Q
    ||||||||||| ||||||||||||||||||||||    
T  20409573 ggatactctccggatacgtatcgggaagtatcgg 20409606  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #52
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 156 - 189
Target Start/End: Complemental strand, 29168048 - 29168015
Alignment:
Q  156 tcggatactctcctgatacgtatcgggaagtatc 189  Q
    |||||||||||||||||||||| |||||||||||    
T  29168048 tcggatactctcctgatacgtaacgggaagtatc 29168015  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #53
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 158 - 191
Target Start/End: Complemental strand, 30323814 - 30323781
Alignment:
Q  158 ggatactctcctgatacgtatcgggaagtatcgg 191  Q
    ||||||||||| ||||||||||||||||||||||    
T  30323814 ggatactctccagatacgtatcgggaagtatcgg 30323781  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #54
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 158 - 191
Target Start/End: Original strand, 31653421 - 31653454
Alignment:
Q  158 ggatactctcctgatacgtatcgggaagtatcgg 191  Q
    ||||||||||| ||||||||||||||||||||||    
T  31653421 ggatactctcccgatacgtatcgggaagtatcgg 31653454  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #55
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 156 - 189
Target Start/End: Original strand, 32381076 - 32381109
Alignment:
Q  156 tcggatactctcctgatacgtatcgggaagtatc 189  Q
    ||||||||||||||||||||||| ||||||||||    
T  32381076 tcggatactctcctgatacgtattgggaagtatc 32381109  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #56
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 89 - 130
Target Start/End: Original strand, 34432325 - 34432366
Alignment:
Q  89 agagttaagttattttaattaacattaattgggaagtattgg 130  Q
    ||||||||||||||||| |||||||||||| |||| ||||||    
T  34432325 agagttaagttattttagttaacattaattaggaaatattgg 34432366  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #57
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 156 - 189
Target Start/End: Original strand, 34432400 - 34432433
Alignment:
Q  156 tcggatactctcctgatacgtatcgggaagtatc 189  Q
    |||||||||||||||||||||||| |||||||||    
T  34432400 tcggatactctcctgatacgtatcaggaagtatc 34432433  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #58
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 20 - 84
Target Start/End: Original strand, 37346631 - 37346696
Alignment:
Q  20 tatactatatccaaaagg-aacattgttagtgttatattatatcgatccaaaaaggaagcactata 84  Q
    ||||||||||| |||||| |||||||||| || |||| |||||| ||| ||||| |||||||||||    
T  37346631 tatactatatcaaaaagggaacattgttaatgctatactatatcaatcaaaaaaagaagcactata 37346696  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #59
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 158 - 191
Target Start/End: Complemental strand, 43189754 - 43189721
Alignment:
Q  158 ggatactctcctgatacgtatcgggaagtatcgg 191  Q
    ||||||||||||||||||||||| ||||||||||    
T  43189754 ggatactctcctgatacgtatcgagaagtatcgg 43189721  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #60
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 23 - 72
Target Start/End: Original strand, 52894983 - 52895031
Alignment:
Q  23 actatatccaaaaggaacattgttagtgttatattatatcgatccaaaaa 72  Q
    ||||||||||||| |||| ||||||||| |||| ||||||||||||||||    
T  52894983 actatatccaaaatgaac-ttgttagtgatatactatatcgatccaaaaa 52895031  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #61
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 158 - 190
Target Start/End: Complemental strand, 8132282 - 8132250
Alignment:
Q  158 ggatactctcctgatacgtatcgggaagtatcg 190  Q
    ||||||||||| |||||||||||||||||||||    
T  8132282 ggatactctccggatacgtatcgggaagtatcg 8132250  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #62
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 207 - 239
Target Start/End: Complemental strand, 10822521 - 10822489
Alignment:
Q  207 aaaataaaatttaatcttcggatactcttctga 239  Q
    |||||||||||||||||||||||||||| ||||    
T  10822521 aaaataaaatttaatcttcggatactctcctga 10822489  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #63
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 207 - 239
Target Start/End: Complemental strand, 12158829 - 12158797
Alignment:
Q  207 aaaataaaatttaatcttcggatactcttctga 239  Q
    |||||||||||||||||||||||| ||||||||    
T  12158829 aaaataaaatttaatcttcggataatcttctga 12158797  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #64
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 160 - 192
Target Start/End: Complemental strand, 25256713 - 25256681
Alignment:
Q  160 atactctcctgatacgtatcgggaagtatcgga 192  Q
    ||||||||| |||||||||||||||||||||||    
T  25256713 atactctccggatacgtatcgggaagtatcgga 25256681  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #65
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 207 - 239
Target Start/End: Original strand, 32381059 - 32381091
Alignment:
Q  207 aaaataaaatttaatcttcggatactcttctga 239  Q
    |||||||||||||||||||||||||||| ||||    
T  32381059 aaaataaaatttaatcttcggatactctcctga 32381091  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #66
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 207 - 239
Target Start/End: Original strand, 34432383 - 34432415
Alignment:
Q  207 aaaataaaatttaatcttcggatactcttctga 239  Q
    |||||||||||||||||||||||||||| ||||    
T  34432383 aaaataaaatttaatcttcggatactctcctga 34432415  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0005 (Bit Score: 57; Significance: 7e-24; HSPs: 2)
Name: scaffold0005
Description:

Target: scaffold0005; HSP #1
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 25 - 181
Target Start/End: Original strand, 202571 - 202725
Alignment:
Q  25 tatatccaaaaggaacattgttagtgttatattatatcgatccaaaaaggaagcactatactcaagagttaagttattttaattaacattaattgggaag 124  Q
    |||||||||||| || |||||||||| |||||||||| |||| ||||| |||||| ||||||| |||||||| |||||||| |||||||||||| |||      
T  202571 tatatccaaaagaaatattgttagtgctatattatattgatctaaaaaagaagcattatactcgagagttaaattattttagttaacattaatt-ggata 202669  T
Q  125 tattggggcagatattggtgcatgataattatcggatactctcctgatacgtatcgg 181  Q
    ||||  ||||| |||  ||||| ||||||||||| ||| | | ||||||||||||||    
T  202670 tatt-aggcaggtatcagtgcaggataattatcgaatattttactgatacgtatcgg 202725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0005; HSP #2
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 27 - 84
Target Start/End: Original strand, 43890 - 43946
Alignment:
Q  27 tatccaaaaggaacattgttagtgttatattatatcgatccaaaaaggaagcactata 84  Q
    |||||||||||||| ||||||||| |||| ||||||||||| |||| ||| |||||||    
T  43890 tatccaaaaggaac-ttgttagtgctatactatatcgatccgaaaaagaatcactata 43946  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0112 (Bit Score: 44; Significance: 4e-16; HSPs: 1)
Name: scaffold0112
Description:

Target: scaffold0112; HSP #1
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 25 - 84
Target Start/End: Original strand, 41367 - 41425
Alignment:
Q  25 tatatccaaaaggaacattgttagtgttatattatatcgatccaaaaaggaagcactata 84  Q
    |||||||||||||||| |||||||||||||| |||||||||||||||| |||||||||||    
T  41367 tatatccaaaaggaac-ttgttagtgttatactatatcgatccaaaaaagaagcactata 41425  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0285 (Bit Score: 43; Significance: 0.000000000000001; HSPs: 2)
Name: scaffold0285
Description:

Target: scaffold0285; HSP #1
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 136 - 234
Target Start/End: Complemental strand, 13439 - 13341
Alignment:
Q  136 atattggtgcatgataattatcggatactctcctgatacgtatcgggaagtatcggataattannnnnnnnaaaataaaatttaatcttcggatactct 234  Q
    |||| |||||| ||||||||||| ||||||| |||||| ||||| ||||| ||||||||||||        ||||||||||||||||||| ||||||||    
T  13439 atatcggtgcaggataattatcgaatactcttctgataagtatcaggaagcatcggataattatttttaaaaaaataaaatttaatcttcagatactct 13341  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0285; HSP #2
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 16 - 84
Target Start/End: Complemental strand, 13709 - 13642
Alignment:
Q  16 gtgttatactatatccaaaaggaacattgttagtgttatattatatcgatccaaaaaggaagcactata 84  Q
    ||||||||||||||| |||| | ||||||||| ||||||| ||||| |||||||||| |||||||||||    
T  13709 gtgttatactatatctaaaatgtacattgttactgttatactatattgatccaaaaa-gaagcactata 13642  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0250 (Bit Score: 41; Significance: 0.00000000000002; HSPs: 2)
Name: scaffold0250
Description:

Target: scaffold0250; HSP #1
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 20 - 84
Target Start/End: Complemental strand, 5972 - 5908
Alignment:
Q  20 tatactatatccaaaaggaacattgttagtgttatattatatcgatccaaaaaggaagcactata 84  Q
    ||||||||||| |||||||||||||||| ||||||| |||||| ||| ||||| |||||||||||    
T  5972 tatactatatcaaaaaggaacattgttaatgttatactatatcaatcaaaaaaagaagcactata 5908  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0250; HSP #2
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 158 - 191
Target Start/End: Complemental strand, 5611 - 5578
Alignment:
Q  158 ggatactctcctgatacgtatcgggaagtatcgg 191  Q
    ||||||||||| ||||||||||||||||||||||    
T  5611 ggatactctcccgatacgtatcgggaagtatcgg 5578  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0640 (Bit Score: 30; Significance: 0.00000008; HSPs: 1)
Name: scaffold0640
Description:

Target: scaffold0640; HSP #1
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 158 - 191
Target Start/End: Original strand, 8111 - 8144
Alignment:
Q  158 ggatactctcctgatacgtatcgggaagtatcgg 191  Q
    ||||||||||| ||||||||||||||||||||||    
T  8111 ggatactctccggatacgtatcgggaagtatcgg 8144  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0177 (Bit Score: 30; Significance: 0.00000008; HSPs: 1)
Name: scaffold0177
Description:

Target: scaffold0177; HSP #1
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 158 - 191
Target Start/End: Original strand, 25560 - 25593
Alignment:
Q  158 ggatactctcctgatacgtatcgggaagtatcgg 191  Q
    ||||||||||| ||||||||||||||||||||||    
T  25560 ggatactctccggatacgtatcgggaagtatcgg 25593  T

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Target: scaffold0240 (Bit Score: 29; Significance: 0.0000003; HSPs: 1)
Name: scaffold0240
Description:

Target: scaffold0240; HSP #1
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 159 - 191
Target Start/End: Complemental strand, 10698 - 10666
Alignment:
Q  159 gatactctcctgatacgtatcgggaagtatcgg 191  Q
    |||||||||||||||||||||| ||||||||||    
T  10698 gatactctcctgatacgtatcgagaagtatcgg 10666  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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