View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
|
Alignment Overview
Query: NF10182_low_3 (Length: 516)
Name: NF10182_low_3
Description: NF10182
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF10182_low_3 |
 |  |
|
Alignment Details
Target: chr1 (Bit Score: 332; Significance: 0; HSPs: 3)
Name: chr1
Description:
Target: chr1; HSP #1
Raw Score: 332; E-Value: 0
Query Start/End: Original strand, 27 - 503
Target Start/End: Original strand, 29990520 - 29990996
Alignment:
| Q |
27 |
aaagtgttaaacaacctgctttatcttttcataaaagtacatccatttcagcttcaccgtttgatctagtgcattctgatatctggggtcctactcccac |
126 |
Q |
| |
|
|||||| |||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||| ||||||||| ||||||| |
|
|
| T |
29990520 |
aaagtgctaaacaacctgctttatcttttcataaatgtacatccatttcagcttcaccgtttgatctagtgcattctgatatttggggtcctcctcccac |
29990619 |
T |
 |
| Q |
127 |
acctactatgggaggtgctcggtattttgttctctttattgatgattattctcatttcacatggatagatatgatnnnnnnntagacacgagcttactca |
226 |
Q |
| |
|
|||||||||| ||||| || |||||||||| | ||||||||||||||||||| ||||||||||||| ||||||| |||||| |||||| |||| |
|
|
| T |
29990620 |
acctactatgagaggttttcagtattttgttatatttattgatgattattctcgtttcacatggatatatatgatgaaaaa-tagacatgagcttcctca |
29990718 |
T |
 |
| Q |
227 |
aatttacatcaattttgccaaaatgattcaaacacaattttct-aaagtaattaaagttttccaacgagataatgccatggaatatcgtgattctaaact |
325 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||| | ||||| ||||||||||||| |||||||||||||||||||||||||||||||||||| |
|
|
| T |
29990719 |
aatttacatcaattttgccaaaatgattcaaacacaatttttttaaagtcattaaagttttccgacgagataatgccatggaatatcgtgattctaaact |
29990818 |
T |
 |
| Q |
326 |
cttgtcttttcttagtgagcagggtacattttctgaattttcttgtccatacacatctcaacaaaagggtcgcgctgagagaaagcatcgtcacattctt |
425 |
Q |
| |
|
||||||||||||||||||||| |||||||| ||||||||||||||||||||||||||||||||||| |||||||||||||||||||||| | |||||||| |
|
|
| T |
29990819 |
cttgtcttttcttagtgagcatggtacattgtctgaattttcttgtccatacacatctcaacaaaatggtcgcgctgagagaaagcatcattacattctt |
29990918 |
T |
 |
| Q |
426 |
gactcagtctgtgccatgcttatctcagcttcttgtccataacgtgcttggggggaagctgctcttactgatgtccat |
503 |
Q |
| |
|
||||||||||||| |||||||||||| || ||||||||| ||||||||||||| |||||||||||||||| ||||||| |
|
|
| T |
29990919 |
gactcagtctgtgtcatgcttatctcggcctcttgtccagaacgtgcttggggtgaagctgctcttactgctgtccat |
29990996 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #2
Raw Score: 240; E-Value: 1e-133
Query Start/End: Original strand, 34 - 503
Target Start/End: Original strand, 16502567 - 16503035
Alignment:
| Q |
34 |
taaacaacctgctttatcttttcataaaagtacatccatttcagcttcaccgtttgatctagtgcattctgatatctggggtcctactcccacacctact |
133 |
Q |
| |
|
||||||||| || || ||||| |||||||||| |||||||||| |||||| |||||||| |||||||||||||| ||||||| | ||||||||||||| |
|
|
| T |
16502567 |
taaacaaccagccttgtctttcaataaaagtacttccatttcagtttcaccatttgatcttgtgcattctgatatttggggtcatgctcccacacctacg |
16502666 |
T |
 |
| Q |
134 |
atgggaggtgctcggtattttgttctctttattgatgattattctcatttcacatggatagatatgatnnnnnnntagacacgagcttactcaaatttac |
233 |
Q |
| |
|
||||||||| || | ||||||||| | ||||||||||||||||||| || ||||||||| ||||||| |||||| |||||| ||||||||||| |
|
|
| T |
16502667 |
atgggaggttctagatattttgttatatttattgatgattattctcgctttacatggatatatatgatgaaaaa-tagacatgagcttcctcaaatttac |
16502765 |
T |
 |
| Q |
234 |
atcaattttgccaaaatgattcaaacacaattttctaaagtaattaaagttttccaacgagataatgccatggaatatcgtgattctaaactcttgtctt |
333 |
Q |
| |
|
||||||||||||||||||||||||||| ||||||||||||| ||||||||||| | |||||||||| |||||||||||||||||||||||||||| | | |
|
|
| T |
16502766 |
atcaattttgccaaaatgattcaaacataattttctaaagtcattaaagtttttcggcgagataatgtcatggaatatcgtgattctaaactcttgacat |
16502865 |
T |
 |
| Q |
334 |
ttcttagtgagcagggtacattttctgaattttcttgtccatacacatctcaacaaaagggtcgcgctgagagaaagcatcgtcacattcttgactcagt |
433 |
Q |
| |
|
|||||||||| |||||||| || | ||||||||| |||||||| ||||||||||| || |||||||||||||||||||||||| |||||||||||||||| |
|
|
| T |
16502866 |
ttcttagtgatcagggtaccttgtttgaattttcatgtccatatacatctcaacagaatggtcgcgctgagagaaagcatcgttacattcttgactcagt |
16502965 |
T |
 |
| Q |
434 |
ctgtgccatgcttatctcagcttcttgtccataacgtgcttggggggaagctgctcttactgatgtccat |
503 |
Q |
| |
|
||||||||||| ||||||||| || ||| || |||| |||||||| ||||| |||||||| | ||||||| |
|
|
| T |
16502966 |
ctgtgccatgcatatctcagcctcatgttcagaacgcgcttggggtgaagccgctcttaccgctgtccat |
16503035 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #3
Raw Score: 219; E-Value: 1e-120
Query Start/End: Original strand, 34 - 502
Target Start/End: Original strand, 24431671 - 24432138
Alignment:
| Q |
34 |
taaacaacctgctttatcttttcataaaagtacatccatttcagcttcaccgtttgatctagtgcattctgatatctggggtcctactcccacacctact |
133 |
Q |
| |
|
||||||||| ||||| || ||| |||||||||| ||||||||||||||||||||||| || || |||||||| ||||| ||| ||||||| ||||| |
|
|
| T |
24431671 |
taaacaaccagctttgtcatttaataaaagtactaatatttcagcttcaccgtttgatcttgtccactctgatatttggggacctgctcccactcctaca |
24431770 |
T |
 |
| Q |
134 |
atgggaggtgctcggtattttgttctctttattgatgattattctcatttcacatggatagatatgatnnnnnnntagacacgagcttactcaaatttac |
233 |
Q |
| |
|
||||||||| |||||||||||||| | ||||||||||||||||||| ||| ||||||||| | |||| | | || |||||| ||||||||||| |
|
|
| T |
24431771 |
atgggaggttctcggtattttgttttgtttattgatgattattctcgttttacatggatatacttgatgaaaaa-tcgtcatgagcttcctcaaatttac |
24431869 |
T |
 |
| Q |
234 |
atcaattttgccaaaatgattcaaacacaattttctaaagtaattaaagttttccaacgagataatgccatggaatatcgtgattctaaactcttgtctt |
333 |
Q |
| |
|
|| || ||||| ||||||||||||||||||||||||||| | ||||||||||| | |||||||||||||||||||||||||||||||||||||| || |
|
|
| T |
24431870 |
attaagtttgcaaaaatgattcaaacacaattttctaaaattattaaagtttttcgccgagataatgccatggaatatcgtgattctaaactcttagatt |
24431969 |
T |
 |
| Q |
334 |
ttcttagtgagcagggtacattttctgaattttcttgtccatacacatctcaacaaaagggtcgcgctgagagaaagcatcgtcacattcttgactcagt |
433 |
Q |
| |
|
||||| ||||||||||||| || |||||||| ||||||||||| |||||||||||||| ||||| ||||||||||| ||||||||||||||||||| || |
|
|
| T |
24431970 |
ttcttggtgagcagggtaccttgtctgaattctcttgtccatatacatctcaacaaaatggtcgtgctgagagaaaacatcgtcacattcttgactttgt |
24432069 |
T |
 |
| Q |
434 |
ctgtgccatgcttatctcagcttcttgtccataacgtgcttggggggaagctgctcttactgatgtcca |
502 |
Q |
| |
|
| ||||||||||||||||||| |||||||| ||||||||||||| |||||| ||||||||| |||||| |
|
|
| T |
24432070 |
ccgtgccatgcttatctcagcctcttgtcctgaacgtgcttggggtgaagcttctcttactgctgtcca |
24432138 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3 (Bit Score: 252; Significance: 1e-140; HSPs: 1)
Name: chr3
Description:
Target: chr3; HSP #1
Raw Score: 252; E-Value: 1e-140
Query Start/End: Original strand, 60 - 493
Target Start/End: Complemental strand, 53017620 - 53017188
Alignment:
| Q |
60 |
aaagtacatccatttcagcttcaccgtttgatctagtgcattctgatatctggggtcctactcccacacctactatgggaggtgctcggtattttgttct |
159 |
Q |
| |
|
||||||| |||||||||| |||||| |||||| ||||||||||| |||| ||||||||| ||||||||||||||||||||||| |||| ||| ||||||| |
|
|
| T |
53017620 |
aaagtacttccatttcagtttcaccatttgatatagtgcattctaatatttggggtcctgctcccacacctactatgggaggttctcgttatattgttct |
53017521 |
T |
 |
| Q |
160 |
ctttattgatgattattctcatttcacatggatagatatgatnnnnnnntagacacgagcttactcaaatttacatcaattttgccaaaatgattcaaac |
259 |
Q |
| |
|
||||||||||||||||||| || ||||||||| ||||||| ||||||||||||| |||| |||||||||||||||||||||||||||||||| |
|
|
| T |
53017520 |
atttattgatgattattctcgctttacatggatatatatgatgaaaaa-tagacacgagcttcctcatatttacatcaattttgccaaaatgattcaaac |
53017422 |
T |
 |
| Q |
260 |
acaattttctaaagtaattaaagttttccaacgagataatgccatggaatatcgtgattctaaactcttgtcttttcttagtgagcagggtacattttct |
359 |
Q |
| |
|
||||||||||||||| |||||||| || | |||||||||||||| ||||||||||||||||||||||||| |||||||||||||||||||| || ||| |
|
|
| T |
53017421 |
acaattttctaaagtcattaaagtctttcggtgagataatgccatgaaatatcgtgattctaaactcttgtcatttcttagtgagcagggtaccttgtct |
53017322 |
T |
 |
| Q |
360 |
gaattttcttgtccatacacatctcaacaaaagggtcgcgctgagagaaagcatcgtcacattcttgactcagtctgtgccatgcttatctcagcttctt |
459 |
Q |
| |
|
|||||||| ||||||||||||||||||||||| ||||| |||||||||||||||||||||||||||||||||||| ||||||||||||||||||| || | |
|
|
| T |
53017321 |
gaattttcatgtccatacacatctcaacaaaatggtcgtgctgagagaaagcatcgtcacattcttgactcagtccgtgccatgcttatctcagcctcgt |
53017222 |
T |
 |
| Q |
460 |
gtccataacgtgcttggggggaagctgctcttac |
493 |
Q |
| |
|
||||| ||| ||||||| ||||| |||||||| |
|
|
| T |
53017221 |
gtccagaacacgcttgggatgaagccgctcttac |
53017188 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6 (Bit Score: 223; Significance: 1e-122; HSPs: 3)
Name: chr6
Description:
Target: chr6; HSP #1
Raw Score: 223; E-Value: 1e-122
Query Start/End: Original strand, 34 - 502
Target Start/End: Original strand, 17450720 - 17451187
Alignment:
| Q |
34 |
taaacaacctgctttatcttttcataaaagtacatccatttcagcttcaccgtttgatctagtgcattctgatatctggggtcctactcccacacctact |
133 |
Q |
| |
|
||||||||| ||||| || ||| |||||||||| ||||||||||||||||||||||| || || |||||||| ||||| ||| ||||||| ||||| |
|
|
| T |
17450720 |
taaacaaccagctttgtcatttaataaaagtactaatatttcagcttcaccgtttgatcttgtccactctgatatttggggacctgctcccactcctaca |
17450819 |
T |
 |
| Q |
134 |
atgggaggtgctcggtattttgttctctttattgatgattattctcatttcacatggatagatatgatnnnnnnntagacacgagcttactcaaatttac |
233 |
Q |
| |
|
||||||||| |||||||||||||| | ||||||||||||||||||| ||| ||||||||| | |||| | | || |||||| ||||||||||| |
|
|
| T |
17450820 |
atgggaggttctcggtattttgttttgtttattgatgattattctcgttttacatggatatacttgatgaaaaa-tcgtcatgagcttcctcaaatttac |
17450918 |
T |
 |
| Q |
234 |
atcaattttgccaaaatgattcaaacacaattttctaaagtaattaaagttttccaacgagataatgccatggaatatcgtgattctaaactcttgtctt |
333 |
Q |
| |
|
|| || ||||| ||||||||||||||||||||||||||| | ||||||||||| | |||||||||||||||||||||||||||||||||||||| || |
|
|
| T |
17450919 |
attaagtttgcaaaaatgattcaaacacaattttctaaaattattaaagtttttcgccgagataatgccatggaatatcgtgattctaaactcttagatt |
17451018 |
T |
 |
| Q |
334 |
ttcttagtgagcagggtacattttctgaattttcttgtccatacacatctcaacaaaagggtcgcgctgagagaaagcatcgtcacattcttgactcagt |
433 |
Q |
| |
|
||||| ||||||||||||| || |||||||| ||||||||||| |||||||||||||| ||||| ||||||||||| |||||||||||||||||||| || |
|
|
| T |
17451019 |
ttcttggtgagcagggtaccttgtctgaattctcttgtccatatacatctcaacaaaatggtcgtgctgagagaaaacatcgtcacattcttgactctgt |
17451118 |
T |
 |
| Q |
434 |
ctgtgccatgcttatctcagcttcttgtccataacgtgcttggggggaagctgctcttactgatgtcca |
502 |
Q |
| |
|
| ||||||||||||||||||| |||||||| ||||||||||||| |||||| ||||||||| |||||| |
|
|
| T |
17451119 |
ccgtgccatgcttatctcagcctcttgtcctgaacgtgcttggggtgaagcttctcttactgctgtcca |
17451187 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #2
Raw Score: 137; E-Value: 3e-71
Query Start/End: Original strand, 86 - 476
Target Start/End: Original strand, 14825487 - 14825876
Alignment:
| Q |
86 |
tttgatctagtgcattctgatatctggggtcctactcccacacctactatgggaggtgctcggtattttgttctctttattgatgattattctcatttca |
185 |
Q |
| |
|
|||||||| || ||||||||||| ||||||||| |||| || ||| ||||||||||| |||||||||||||| | ||||| ||||||||||||| || | |
|
|
| T |
14825487 |
tttgatcttgtacattctgatatttggggtcctgctcctactccttctatgggaggttctcggtattttgttttatttatcgatgattattctcgttata |
14825586 |
T |
 |
| Q |
186 |
catggatagatatgatnnnnnnntagacacgagcttactcaaatttacatcaattttgccaaaatgattcaaacacaattttctaaagtaattaaagttt |
285 |
Q |
| |
|
| |||||| ||||| | | || |||||| |||||||||||| || |||| ||||||||| || |||||||||||||| ||| || |||| |
|
|
| T |
14825587 |
cttggatattcatgatgaaaaa-tcggcatgagcttcctcaaatttacactaacgttgcaaaaatgattaaagcacaattttctaaaacaatcaaggttt |
14825685 |
T |
 |
| Q |
286 |
tccaacgagataatgccatggaatatcgtgattctaaactcttgtcttttcttagtgagcagggtacattttctgaattttcttgtccatacacatctca |
385 |
Q |
| |
|
| | ||||||||||| |||||||| ||||||| ||||||||| ||||||||| || |||||||||| || ||||||||||||||||| || ||||| || |
|
|
| T |
14825686 |
ttcgccgagataatgcaatggaataccgtgattttaaactcttatcttttcttggtaagcagggtaccttgtctgaattttcttgtccttatacatcaca |
14825785 |
T |
 |
| Q |
386 |
acaaaagggtcgcgctgagagaaagcatcgtcacattcttgactcagtctgtgccatgcttatctcagcttcttgtccataacgtgcttgg |
476 |
Q |
| |
|
|||||| ||||| ||||||||||||||||||| ||||||||| || || ||||||||||||||||||| |||||||| ||||||||||| |
|
|
| T |
14825786 |
acaaaatggtcgtgctgagagaaagcatcgtcccattcttgattctgttcgtgccatgcttatctcagcctcttgtcctgaacgtgcttgg |
14825876 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #3
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 443 - 503
Target Start/End: Complemental strand, 5241965 - 5241905
Alignment:
| Q |
443 |
gcttatctcagcttcttgtccataacgtgcttggggggaagctgctcttactgatgtccat |
503 |
Q |
| |
|
|||||||||||| ||||||||| |||| |||||||| |||||||||||||| | ||||||| |
|
|
| T |
5241965 |
gcttatctcagcctcttgtccaaaacgcgcttggggtgaagctgctcttaccgctgtccat |
5241905 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4 (Bit Score: 186; Significance: 1e-100; HSPs: 3)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 186; E-Value: 1e-100
Query Start/End: Original strand, 128 - 494
Target Start/End: Complemental strand, 20670483 - 20670117
Alignment:
| Q |
128 |
cctactatgggaggtgctcggtattttgttctctttattgatgattattctcatttcacatggatagatatgatnnnnnnntagacacgagcttactcaa |
227 |
Q |
| |
|
||||| ||||||||| |||||||||||||| | |||||||||||||||||||| || ||||||||| ||||||| ||||||||||||| ||| | |
|
|
| T |
20670483 |
cctaccatgggaggttctcggtattttgttatatttattgatgattattctcactttacatggatatatatgatgaaaaa-tagacacgagcttcctcga |
20670385 |
T |
 |
| Q |
228 |
atttacatcaattttgccaaaatgattcaaacacaattttctaaagtaattaaagttttccaacgagataatgccatggaatatcgtgattctaaactct |
327 |
Q |
| |
|
||||| ||||||||||||||||||||||||||||||||||||||||| ||||| |||| | |||||||||| ||||||| |||||||||||||||||| |
|
|
| T |
20670384 |
atttatatcaattttgccaaaatgattcaaacacaattttctaaagttgttaaattttttcggcgagataatgtcatggaagatcgtgattctaaactct |
20670285 |
T |
 |
| Q |
328 |
tgtcttttcttagtgagcagggtacattttctgaattttcttgtccatacacatctcaacaaaagggtcgcgctgagagaaagcatcgtcacattcttga |
427 |
Q |
| |
|
||||||| |||||||| || ||||| || | ||||||||| ||||||||||||||||||||||| ||||| | ||| ||||||||||||||||||||||| |
|
|
| T |
20670284 |
tgtctttacttagtgaacatggtaccttgtttgaattttcatgtccatacacatctcaacaaaatggtcgtgatgaaagaaagcatcgtcacattcttga |
20670185 |
T |
 |
| Q |
428 |
ctcagtctgtgccatgcttatctcagcttcttgtccataacgtgcttggggg-gaagctgctcttact |
494 |
Q |
| |
|
|||| | ||| |||||||||| |||| ||||||||| |||||||||||||| |||| |||||||||| |
|
|
| T |
20670184 |
ctcaattcgtgtcatgcttatcccagcctcttgtccagaacgtgcttgggggtgaagatgctcttact |
20670117 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #2
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 90 - 156
Target Start/End: Complemental strand, 52393043 - 52392977
Alignment:
| Q |
90 |
atctagtgcattctgatatctggggtcctactcccacacctactatgggaggtgctcggtattttgt |
156 |
Q |
| |
|
|||| ||| ||| |||||||||||||||| |||||||||||| || ||||||| || |||||||||| |
|
|
| T |
52393043 |
atcttgtgaattttgatatctggggtcctgctcccacacctattaggggaggttcttggtattttgt |
52392977 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #3
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 217 - 307
Target Start/End: Complemental strand, 52392948 - 52392858
Alignment:
| Q |
217 |
agcttactcaaatttacatcaattttgccaaaatgattcaaacacaattttctaaagtaattaaagttttccaacgagataatgccatgga |
307 |
Q |
| |
|
||||| ||||| |||||| ||| |||| |||||||||||||| |||||||| |||| |||||| |||| | |||||||||||||||| |
|
|
| T |
52392948 |
agcttcctcaattttacagcaactttgtcaaaatgattcaaaaacaatttttcaaagccattaaattttttggatgagataatgccatgga |
52392858 |
T |
 |
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[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7 (Bit Score: 136; Significance: 1e-70; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 136; E-Value: 1e-70
Query Start/End: Original strand, 148 - 464
Target Start/End: Original strand, 12544153 - 12544466
Alignment:
| Q |
148 |
gtattttgttctctttattgatgattattctcatttcacatggatagatatgatnnnnnnntagacacgagcttactcaaatttacatcaattttgccaa |
247 |
Q |
| |
|
|||||||||||| ||||||||||||||||||| || ||||||||| ||||||| ||||||||||||| |||||||||||||||||||| ||| |
|
|
| T |
12544153 |
gtattttgttctatttattgatgattattctcgctttacatggatatatatgatgaaaaa-tagacacgagcttcctcaaatttacatcaattttatcaa |
12544251 |
T |
 |
| Q |
248 |
aatgattcaaacacaattttctaaagtaattaaagttttccaacgagataatgccatggaatatcgtgattctaaactcttgtcttttcttagtgagcag |
347 |
Q |
| |
|
||||| | ||||||||||| ||||| |||||||| || | ||||||||||||| ||||||||||||||||||||||||| ||||||| ||||||| |
|
|
| T |
12544252 |
aatgaattcaacacaatttt--aaagtcattaaagtctttcggcgagataatgccacaaaatatcgtgattctaaactcttgtcatttcttaatgagcag |
12544349 |
T |
 |
| Q |
348 |
ggtacattttctgaattttcttgtccatacacatctcaacaaaagggtcgcgctgagagaaagcatcgtcacattcttgactcagtctgtgccatgctta |
447 |
Q |
| |
|
| || || || | ||||| ||||||||||||||||||||||| || | |||||||||||||||||||||||||||||||||||| |||||||||||| |
|
|
| T |
12544350 |
aggactttgtcccagttttcatgtccatacacatctcaacaaaatagttgtgctgagagaaagcatcgtcacattcttgactcagtccgtgccatgctta |
12544449 |
T |
 |
| Q |
448 |
tctcagcttcttgtcca |
464 |
Q |
| |
|
| ||||| ||||||||| |
|
|
| T |
12544450 |
tttcagcatcttgtcca |
12544466 |
T |
 |
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[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5 (Bit Score: 99; Significance: 1e-48; HSPs: 1)
Name: chr5
Description:
Target: chr5; HSP #1
Raw Score: 99; E-Value: 1e-48
Query Start/End: Original strand, 239 - 455
Target Start/End: Original strand, 15269032 - 15269249
Alignment:
| Q |
239 |
ttttgccaaaatgattcaaacacaattttctaaagtaattaaagttttccaacgagataatgccatggaatatcgtg-at-tctaaactcttgtcttttc |
336 |
Q |
| |
|
||||||||||||||||||||| | ||||||||| | |||||||||| |||||||||||||||||| ||||| || || ||||||||||||||||||| |
|
|
| T |
15269032 |
ttttgccaaaatgattcaaacttagttttctaaaatctttaaagtttttcaacgagataatgccatgaaatatattgtatatctaaactcttgtcttttc |
15269131 |
T |
 |
| Q |
337 |
ttagtgagcagggtacattttctgaattttcttgtccatacacatctcaacaaaagggtcgcgctgagagaaagcatcgtcacattcttgactcagtctg |
436 |
Q |
| |
|
|| |||||||| |||| || ||||| | || ||||||||| |||| ||||||||| ||| ||||||||||||||||||||||| ||||||||| ||| || |
|
|
| T |
15269132 |
ttggtgagcagagtaccttgtctgattatt-ttgtccatatacatttcaacaaaatggttgcgctgagagaaagcatcgtcacgttcttgacttagtttg |
15269230 |
T |
 |
| Q |
437 |
tgccatgcttatctcagct |
455 |
Q |
| |
|
|| |||||||||||||||| |
|
|
| T |
15269231 |
tgtcatgcttatctcagct |
15269249 |
T |
 |
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[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
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