View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF10182_low_4 (Length: 428)

Name: NF10182_low_4
Description: NF10182
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF10182_low_4
NF10182_low_4
[»] chr3 (48 HSPs)
chr3 (261-428)||(33362240-33362407)
chr3 (16-164)||(36635354-36635502)
chr3 (16-170)||(19580426-19580580)
chr3 (48-164)||(11651000-11651116)
chr3 (72-166)||(33214441-33214535)
chr3 (72-169)||(27073080-27073177)
chr3 (72-164)||(36274120-36274211)
chr3 (165-227)||(33362144-33362206)
chr3 (87-165)||(33214626-33214704)
chr3 (87-164)||(33219072-33219149)
chr3 (87-162)||(10598810-10598885)
chr3 (355-428)||(41359804-41359879)
chr3 (87-165)||(36274312-36274390)
chr3 (96-161)||(36635241-36635305)
chr3 (348-428)||(22304613-22304693)
chr3 (106-166)||(27072911-27072971)
chr3 (106-164)||(10599004-10599062)
chr3 (355-417)||(47964557-47964621)
chr3 (348-428)||(32589747-32589827)
chr3 (326-428)||(37990655-37990753)
chr3 (348-428)||(12114596-12114676)
chr3 (356-428)||(21832385-21832457)
chr3 (348-428)||(32462934-32463014)
chr3 (348-428)||(35946566-35946646)
chr3 (348-428)||(43346825-43346905)
chr3 (348-427)||(54018232-54018311)
chr3 (326-428)||(15772898-15772996)
chr3 (348-417)||(22303989-22304058)
chr3 (354-428)||(33803290-33803366)
chr3 (370-414)||(22303715-22303759)
chr3 (349-417)||(29644937-29645005)
chr3 (348-428)||(54017850-54017930)
chr3 (370-417)||(1634370-1634417)
chr3 (349-428)||(29644616-29644695)
chr3 (349-428)||(37991012-37991091)
chr3 (355-426)||(8327950-8328023)
chr3 (348-417)||(42342124-42342193)
chr3 (326-417)||(15773247-15773336)
chr3 (348-428)||(39934989-39935069)
chr3 (356-417)||(42342428-42342491)
chr3 (356-417)||(52634731-52634793)
chr3 (356-428)||(32462598-32462672)
chr3 (370-428)||(39389114-39389172)
chr3 (42-83)||(11651176-11651217)
chr3 (355-417)||(45395692-45395756)
chr3 (348-428)||(3135107-3135187)
chr3 (356-417)||(25739465-25739528)
chr3 (355-428)||(39914296-39914371)
[»] chr5 (64 HSPs)
chr5 (16-165)||(5146619-5146768)
chr5 (16-164)||(33377762-33377912)
chr5 (16-164)||(13823264-13823412)
chr5 (16-161)||(35454566-35454710)
chr5 (16-164)||(228717-228865)
chr5 (16-164)||(6518203-6518351)
chr5 (48-165)||(8489122-8489239)
chr5 (19-147)||(40881940-40882066)
chr5 (48-164)||(40881792-40881906)
chr5 (72-167)||(8323880-8323975)
chr5 (73-164)||(19898927-19899018)
chr5 (72-165)||(26534670-26534763)
chr5 (72-161)||(42630879-42630968)
chr5 (72-164)||(791592-791684)
chr5 (16-149)||(27319595-27319716)
chr5 (72-164)||(130420-130512)
chr5 (87-164)||(26534506-26534583)
chr5 (87-164)||(35454451-35454527)
chr5 (92-164)||(14388512-14388583)
chr5 (87-165)||(130253-130331)
chr5 (87-165)||(6518390-6518467)
chr5 (87-164)||(8323707-8323784)
chr5 (96-165)||(14069860-14069928)
chr5 (87-164)||(42630711-42630788)
chr5 (93-161)||(19897228-19897295)
chr5 (87-164)||(5146504-5146580)
chr5 (348-428)||(13415794-13415874)
chr5 (107-164)||(791810-791867)
chr5 (351-428)||(25327979-25328056)
chr5 (348-428)||(18603154-18603234)
chr5 (355-428)||(26074656-26074731)
chr5 (348-428)||(40296349-40296429)
chr5 (355-417)||(1028556-1028620)
chr5 (96-165)||(13823149-13823217)
chr5 (371-428)||(26075219-26075276)
chr5 (370-419)||(32487446-32487495)
chr5 (348-428)||(6500494-6500574)
chr5 (352-428)||(9498692-9498768)
chr5 (348-428)||(11417011-11417091)
chr5 (348-428)||(34753059-34753139)
chr5 (356-428)||(15370446-15370520)
chr5 (370-417)||(41170689-41170736)
chr5 (356-417)||(26074821-26074885)
chr5 (375-428)||(3295405-3295458)
chr5 (16-65)||(19897342-19897391)
chr5 (348-417)||(27502070-27502139)
chr5 (348-428)||(41632826-41632906)
chr5 (106-161)||(228990-229044)
chr5 (356-428)||(3295055-3295129)
chr5 (352-428)||(36568603-36568681)
chr5 (348-417)||(15370154-15370223)
chr5 (355-412)||(26074185-26074244)
chr5 (348-428)||(36492251-36492331)
chr5 (370-409)||(36521952-36521991)
chr5 (370-428)||(6224240-6224298)
chr5 (370-428)||(42405652-42405710)
chr5 (358-428)||(299533-299605)
chr5 (355-417)||(624251-624315)
chr5 (370-415)||(2411064-2411109)
chr5 (349-426)||(29549290-29549367)
chr5 (355-417)||(36522276-36522340)
chr5 (348-428)||(6500866-6500946)
chr5 (355-428)||(26590949-26591024)
chr5 (355-428)||(35150051-35150125)
[»] chr8 (54 HSPs)
chr8 (16-164)||(2814360-2814508)
chr8 (16-166)||(41539768-41539918)
chr8 (16-174)||(397123-397278)
chr8 (16-165)||(14193323-14193471)
chr8 (72-164)||(37994880-37994972)
chr8 (87-164)||(14193512-14193588)
chr8 (95-165)||(41539966-41540035)
chr8 (95-165)||(2814242-2814311)
chr8 (87-164)||(37994708-37994785)
chr8 (87-165)||(44036813-44036891)
chr8 (348-417)||(3670115-3670184)
chr8 (72-148)||(25101746-25101822)
chr8 (358-428)||(9507826-9507898)
chr8 (96-164)||(397007-397074)
chr8 (356-428)||(147495-147569)
chr8 (348-417)||(30441140-30441209)
chr8 (348-428)||(3669731-3669811)
chr8 (370-417)||(8918820-8918867)
chr8 (356-428)||(9608789-9608863)
chr8 (356-428)||(45122668-45122742)
chr8 (370-428)||(9483243-9483301)
chr8 (348-417)||(3038324-3038393)
chr8 (370-415)||(45123061-45123106)
chr8 (348-428)||(30359315-30359395)
chr8 (348-428)||(34835253-34835333)
chr8 (348-428)||(40579540-40579620)
chr8 (348-428)||(45122091-45122171)
chr8 (348-411)||(5915928-5915991)
chr8 (350-417)||(33113403-33113470)
chr8 (356-428)||(40518115-40518189)
chr8 (370-417)||(43274835-43274882)
chr8 (371-428)||(1513972-1514029)
chr8 (348-417)||(20870607-20870676)
chr8 (348-417)||(34834931-34835000)
chr8 (348-417)||(34835530-34835599)
chr8 (348-417)||(34835796-34835865)
chr8 (348-404)||(147888-147944)
chr8 (348-428)||(9482638-9482718)
chr8 (370-417)||(70330-70377)
chr8 (374-417)||(9309034-9309077)
chr8 (356-428)||(30359653-30359727)
chr8 (349-412)||(32640567-32640630)
chr8 (101-164)||(40587991-40588054)
chr8 (370-428)||(1013927-1013985)
chr8 (370-428)||(18372050-18372108)
chr8 (374-428)||(25561876-25561930)
chr8 (370-428)||(40518626-40518684)
chr8 (358-417)||(45121952-45122013)
chr8 (348-428)||(1014279-1014359)
chr8 (377-417)||(5420706-5420746)
chr8 (326-411)||(6651555-6651636)
chr8 (373-417)||(8794166-8794210)
chr8 (355-428)||(9309399-9309474)
chr8 (356-417)||(9609140-9609203)
[»] chr7 (47 HSPs)
chr7 (16-164)||(7298635-7298783)
chr7 (16-164)||(40521133-40521280)
chr7 (18-138)||(46568076-46568196)
chr7 (93-165)||(40521015-40521086)
chr7 (18-88)||(16979492-16979562)
chr7 (72-165)||(19805586-19805679)
chr7 (96-165)||(7298833-7298901)
chr7 (87-164)||(16979605-16979681)
chr7 (87-164)||(28948993-28949069)
chr7 (92-161)||(46567960-46568028)
chr7 (351-428)||(23414-23491)
chr7 (16-71)||(47478473-47478528)
chr7 (87-164)||(19804797-19804874)
chr7 (356-417)||(1085656-1085719)
chr7 (352-428)||(16569240-16569316)
chr7 (352-428)||(16596346-16596422)
chr7 (16-73)||(28948891-28948950)
chr7 (370-428)||(7517624-7517682)
chr7 (370-428)||(22566718-22566776)
chr7 (356-428)||(37533051-37533124)
chr7 (348-428)||(11845235-11845315)
chr7 (348-428)||(22567073-22567153)
chr7 (355-428)||(30244314-30244389)
chr7 (348-428)||(37533398-37533478)
chr7 (348-428)||(45433285-45433365)
chr7 (348-416)||(118333-118403)
chr7 (370-428)||(6054604-6054662)
chr7 (350-428)||(29157609-29157687)
chr7 (357-428)||(36534825-36534898)
chr7 (370-428)||(45434680-45434738)
chr7 (371-428)||(36939790-36939847)
chr7 (355-428)||(7554069-7554144)
chr7 (348-428)||(19122775-19122855)
chr7 (352-428)||(30245121-30245197)
chr7 (352-428)||(30253536-30253612)
chr7 (348-428)||(45754759-45754839)
chr7 (370-428)||(30032611-30032669)
chr7 (356-426)||(24177481-24177553)
chr7 (348-417)||(40094808-40094877)
chr7 (355-417)||(47129150-47129214)
chr7 (355-428)||(34218073-34218148)
chr7 (370-416)||(1085304-1085350)
chr7 (370-428)||(8128497-8128555)
chr7 (370-428)||(14681554-14681612)
chr7 (356-426)||(28300293-28300366)
chr7 (371-417)||(40230348-40230394)
chr7 (109-155)||(47478370-47478415)
[»] chr6 (37 HSPs)
chr6 (16-164)||(21389021-21389169)
chr6 (16-163)||(7789786-7789933)
chr6 (72-163)||(33022340-33022431)
chr6 (87-166)||(33022162-33022241)
chr6 (87-161)||(21389209-21389282)
chr6 (82-153)||(7789678-7789748)
chr6 (348-428)||(29518547-29518627)
chr6 (348-428)||(29518964-29519044)
chr6 (348-428)||(32741223-32741303)
chr6 (356-428)||(16454951-16455025)
chr6 (74-163)||(28472535-28472624)
chr6 (348-428)||(2377798-2377878)
chr6 (348-428)||(3409303-3409383)
chr6 (348-428)||(3415502-3415582)
chr6 (355-428)||(10074030-10074105)
chr6 (356-428)||(1127404-1127478)
chr6 (348-417)||(16107733-16107802)
chr6 (348-428)||(2378170-2378250)
chr6 (348-428)||(3058270-3058350)
chr6 (355-428)||(10074402-10074477)
chr6 (356-428)||(16454619-16454693)
chr6 (74-163)||(29859723-29859813)
chr6 (370-428)||(32460636-32460694)
chr6 (370-428)||(35210248-35210306)
chr6 (348-417)||(2578477-2578546)
chr6 (348-428)||(2843598-2843679)
chr6 (348-428)||(2578869-2578949)
chr6 (348-428)||(593741-593823)
chr6 (326-423)||(2579508-2579601)
chr6 (348-417)||(2579906-2579975)
chr6 (348-417)||(3409715-3409784)
chr6 (348-428)||(1846792-1846872)
chr6 (355-407)||(12071730-12071784)
chr6 (381-428)||(16108107-16108154)
chr6 (370-428)||(14748394-14748452)
chr6 (348-417)||(26544104-26544173)
chr6 (355-428)||(10073655-10073730)
[»] chr1 (65 HSPs)
chr1 (16-167)||(23346416-23346567)
chr1 (16-164)||(50892963-50893111)
chr1 (16-164)||(41833874-41834022)
chr1 (16-163)||(39669176-39669321)
chr1 (16-164)||(42180688-42180834)
chr1 (16-164)||(48871364-48871501)
chr1 (16-165)||(28217646-28217784)
chr1 (16-100)||(4157009-4157093)
chr1 (54-163)||(50904992-50905103)
chr1 (72-164)||(26552164-26552256)
chr1 (72-164)||(10227712-10227804)
chr1 (16-137)||(7062034-7062142)
chr1 (87-165)||(7062184-7062261)
chr1 (87-165)||(10227899-10227977)
chr1 (87-160)||(19059378-19059451)
chr1 (92-164)||(48752586-48752657)
chr1 (72-155)||(19059550-19059633)
chr1 (87-165)||(28217529-28217606)
chr1 (87-164)||(48871247-48871323)
chr1 (87-164)||(50893150-50893226)
chr1 (87-162)||(26551992-26552067)
chr1 (93-164)||(42180571-42180641)
chr1 (87-164)||(4156892-4156968)
chr1 (93-164)||(41834069-41834139)
chr1 (92-163)||(50905104-50905175)
chr1 (87-155)||(23346608-23346675)
chr1 (352-427)||(66123-66200)
chr1 (355-417)||(17294632-17294696)
chr1 (371-428)||(44290882-44290939)
chr1 (352-417)||(50052061-50052126)
chr1 (348-428)||(26661932-26662012)
chr1 (355-428)||(34364969-34365044)
chr1 (356-428)||(14318911-14318985)
chr1 (370-417)||(44290514-44290561)
chr1 (350-428)||(3550764-3550842)
chr1 (370-428)||(31767217-31767275)
chr1 (348-417)||(38804389-38804458)
chr1 (356-428)||(41142416-41142491)
chr1 (355-428)||(22077534-22077609)
chr1 (355-428)||(26661561-26661636)
chr1 (348-428)||(32594750-32594830)
chr1 (348-428)||(41157035-41157115)
chr1 (348-428)||(41157419-41157499)
chr1 (349-428)||(5320000-5320079)
chr1 (349-428)||(41759527-41759606)
chr1 (370-428)||(66528-66586)
chr1 (348-417)||(9955963-9956033)
chr1 (370-428)||(11977324-11977382)
chr1 (370-428)||(22077166-22077224)
chr1 (87-133)||(39669087-39669133)
chr1 (355-417)||(3875370-3875434)
chr1 (351-428)||(29798243-29798320)
chr1 (348-417)||(37556167-37556235)
chr1 (348-428)||(3537633-3537713)
chr1 (356-417)||(5528794-5528857)
chr1 (352-428)||(44043810-44043886)
chr1 (348-411)||(32168732-32168795)
chr1 (378-417)||(41184489-41184528)
chr1 (353-428)||(5575148-5575225)
chr1 (370-428)||(34364551-34364609)
chr1 (355-428)||(24132027-24132099)
chr1 (348-417)||(45839686-45839755)
chr1 (365-417)||(30630689-30630741)
chr1 (348-428)||(40082451-40082530)
chr1 (348-428)||(48588522-48588602)
[»] chr4 (62 HSPs)
chr4 (16-169)||(18936793-18936946)
chr4 (16-165)||(37177742-37177891)
chr4 (16-168)||(11147010-11147167)
chr4 (72-164)||(3102712-3102804)
chr4 (72-164)||(40534135-40534227)
chr4 (79-165)||(18381488-18381574)
chr4 (87-165)||(40533962-40534040)
chr4 (93-165)||(5121000-5121072)
chr4 (87-174)||(3102530-3102617)
chr4 (87-168)||(13690211-13690292)
chr4 (87-164)||(9231580-9231657)
chr4 (87-165)||(18936675-18936752)
chr4 (72-145)||(9231752-9231825)
chr4 (348-417)||(50630787-50630856)
chr4 (355-428)||(22027998-22028073)
chr4 (348-417)||(31691207-31691278)
chr4 (348-428)||(41370401-41370481)
chr4 (356-428)||(4955355-4955429)
chr4 (348-417)||(25483391-25483460)
chr4 (348-417)||(36629292-36629361)
chr4 (370-426)||(18879852-18879908)
chr4 (348-428)||(18932781-18932861)
chr4 (348-428)||(54108957-54109036)
chr4 (355-428)||(54936240-54936315)
chr4 (348-428)||(55933156-55933236)
chr4 (370-417)||(3271842-3271889)
chr4 (370-428)||(2741115-2741173)
chr4 (87-161)||(11147212-11147285)
chr4 (370-428)||(49880204-49880262)
chr4 (348-417)||(1731679-1731748)
chr4 (348-417)||(3340862-3340931)
chr4 (326-428)||(16889550-16889648)
chr4 (355-417)||(22183301-22183365)
chr4 (348-417)||(39404453-39404522)
chr4 (348-417)||(44620715-44620783)
chr4 (348-428)||(45496849-45496929)
chr4 (370-414)||(49302964-49303008)
chr4 (349-417)||(54017628-54017696)
chr4 (356-428)||(43174551-43174625)
chr4 (353-428)||(52884931-52885009)
chr4 (99-165)||(37177623-37177688)
chr4 (348-428)||(22028401-22028481)
chr4 (348-428)||(39792892-39792972)
chr4 (356-428)||(6975494-6975568)
chr4 (350-417)||(23817715-23817782)
chr4 (356-428)||(34646687-34646761)
chr4 (373-428)||(36572063-36572118)
chr4 (348-415)||(50002483-50002550)
chr4 (370-428)||(20825880-20825938)
chr4 (370-428)||(44620397-44620455)
chr4 (354-428)||(54741216-54741290)
chr4 (373-426)||(2891879-2891932)
chr4 (355-417)||(3244488-3244552)
chr4 (360-410)||(19504758-19504810)
chr4 (355-417)||(28034284-28034348)
chr4 (348-417)||(50459776-50459845)
chr4 (348-428)||(52884739-52884820)
chr4 (355-428)||(2740744-2740819)
chr4 (348-428)||(10245964-10246043)
chr4 (355-416)||(36608698-36608761)
chr4 (356-417)||(39404073-39404136)
chr4 (348-428)||(44621046-44621126)
[»] chr2 (59 HSPs)
chr2 (16-164)||(38086083-38086231)
chr2 (15-164)||(31470587-31470735)
chr2 (16-164)||(3671939-3672087)
chr2 (72-164)||(42028578-42028670)
chr2 (82-165)||(15332844-15332927)
chr2 (72-166)||(2059656-2059750)
chr2 (72-165)||(13280007-13280100)
chr2 (72-164)||(16115046-16115138)
chr2 (72-165)||(31860257-31860350)
chr2 (95-165)||(36059282-36059352)
chr2 (87-164)||(16115231-16115308)
chr2 (87-170)||(31860073-31860156)
chr2 (16-85)||(15330516-15330586)
chr2 (87-169)||(42028765-42028847)
chr2 (87-164)||(2059490-2059567)
chr2 (72-165)||(7317807-7317900)
chr2 (87-163)||(3671822-3671897)
chr2 (95-164)||(38085967-38086035)
chr2 (87-164)||(31470765-31470841)
chr2 (348-428)||(5542659-5542739)
chr2 (348-428)||(36178639-36178719)
chr2 (348-428)||(37106232-37106312)
chr2 (356-428)||(14745707-14745781)
chr2 (356-428)||(15880307-15880381)
chr2 (87-165)||(7317634-7317712)
chr2 (106-164)||(13279840-13279898)
chr2 (107-169)||(15330444-15330505)
chr2 (356-428)||(36005920-36005994)
chr2 (370-428)||(38796676-38796734)
chr2 (348-428)||(5543032-5543112)
chr2 (352-417)||(28254273-28254340)
chr2 (349-417)||(33731703-33731771)
chr2 (356-428)||(41283515-41283589)
chr2 (356-428)||(42514693-42514767)
chr2 (356-415)||(14745334-14745395)
chr2 (356-410)||(6421793-6421849)
chr2 (348-417)||(15511529-15511598)
chr2 (348-428)||(6421429-6421509)
chr2 (349-428)||(6713020-6713100)
chr2 (348-428)||(37105968-37106048)
chr2 (355-428)||(40733561-40733636)
chr2 (370-417)||(31259672-31259719)
chr2 (356-428)||(40679669-40679743)
chr2 (370-428)||(962642-962700)
chr2 (348-417)||(6422165-6422234)
chr2 (348-428)||(36178205-36178285)
chr2 (356-428)||(35580764-35580837)
chr2 (370-417)||(37632653-37632700)
chr2 (326-428)||(40163388-40163487)
chr2 (370-428)||(28531370-28531428)
chr2 (371-405)||(30312856-30312890)
chr2 (358-417)||(31385792-31385853)
chr2 (135-165)||(36059247-36059277)
chr2 (356-410)||(6421688-6421744)
chr2 (372-417)||(25390326-25390371)
chr2 (355-417)||(30313232-30313296)
chr2 (370-411)||(31468806-31468847)
chr2 (357-414)||(30323522-30323581)
chr2 (355-408)||(35580477-35580534)
[»] scaffold0214 (2 HSPs)
scaffold0214 (72-160)||(11630-11718)
scaffold0214 (87-164)||(11814-11891)
[»] scaffold0140 (3 HSPs)
scaffold0140 (82-167)||(15844-15929)
scaffold0140 (16-93)||(15967-16044)
scaffold0140 (133-162)||(16045-16074)
[»] scaffold0135 (2 HSPs)
scaffold0135 (87-164)||(37446-37523)
scaffold0135 (72-145)||(37618-37691)
[»] scaffold0702 (1 HSPs)
scaffold0702 (348-428)||(548-628)
[»] scaffold0078 (1 HSPs)
scaffold0078 (352-428)||(5401-5477)
[»] scaffold0391 (2 HSPs)
scaffold0391 (354-417)||(1729-1794)
scaffold0391 (370-428)||(1162-1220)
[»] scaffold0734 (2 HSPs)
scaffold0734 (382-428)||(5821-5867)
scaffold0734 (348-428)||(5440-5521)
[»] scaffold0027 (1 HSPs)
scaffold0027 (371-427)||(47405-47461)


Alignment Details
Target: chr3 (Bit Score: 148; Significance: 6e-78; HSPs: 48)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 148; E-Value: 6e-78
Query Start/End: Original strand, 261 - 428
Target Start/End: Original strand, 33362240 - 33362407
Alignment:
Q  261 gtaatggacaatcttaaactcaaaagagttttaatgtattaataaatatgttgggtcactaaggggaggttagaacaatcacacaagcaagcaagagaga 360  Q
    |||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||    
T  33362240 gtaatggacaatcttaaaatcaaaagagttttaatgtattaataaatatgttgggtcactaaagggaggttagaacaatcacacaagcaagcaagagaga 33362339  T
Q  361 gacgccacacttacccaaaaccttaaggaaataggtttatgggtcctcttacttatagggtattcaac 428  Q
    |||||||||||||||||||| ||||||||||| |||||||||||||||||||||||| ||||||||||    
T  33362340 gacgccacacttacccaaaatcttaaggaaatgggtttatgggtcctcttacttataaggtattcaac 33362407  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 129; E-Value: 1e-66
Query Start/End: Original strand, 16 - 164
Target Start/End: Original strand, 36635354 - 36635502
Alignment:
Q  16 aaataatggttgagagagaggaagagcagttatttttcatttcttaaattatttcctaattattttaaaataaaacaatgacgtgtcatattttaatttg 115  Q
    ||||||||||||||| ||||||  ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||    
T  36635354 aaataatggttgagaaagaggagaagcagttatttttcatttcttaaattatttcctaattattttaaaataaaacaatgacgtgtcatgttttaatttg 36635453  T
Q  116 ttgtttgtaagaatgatatgttaggttcgttcctacacaagaatttctc 164  Q
    |||||||||| ||||||||||||||||||||||||||||||||||||||    
T  36635454 ttgtttgtaaaaatgatatgttaggttcgttcctacacaagaatttctc 36635502  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 119; E-Value: 1e-60
Query Start/End: Original strand, 16 - 170
Target Start/End: Original strand, 19580426 - 19580580
Alignment:
Q  16 aaataatggttgagagagaggaagagcagttatttttcatttcttaaattatttcctaattattttaaaataaaacaatgacgtgtcatattttaatttg 115  Q
    |||||||||||||||||||||| |||||||| ||||||||||||||||||||||   ||||||||||||||||||||||||| |||||| ||||||||||    
T  19580426 aaataatggttgagagagaggaggagcagttgtttttcatttcttaaattattttaaaattattttaaaataaaacaatgacatgtcatgttttaatttg 19580525  T
Q  116 ttgtttgtaagaatgatatgttaggttcgttcctacacaagaatttctctataac 170  Q
    ||||||||||||||||||||||||||||||||||| |||||||||||||| ||||    
T  19580526 ttgtttgtaagaatgatatgttaggttcgttcctatacaagaatttctctttaac 19580580  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 48 - 164
Target Start/End: Complemental strand, 11651116 - 11651000
Alignment:
Q  48 tttttcatttcttaaattatttcctaattattttaaaataaaacaatgacgtgtcatattttaatttgttgtttgtaagaatgatatgttaggttcgttc 147  Q
    |||| ||||||||||||||||||| ||||||||||||||||||||||||  | ||||||||||| |||||||||||||||||||||||||||||||||||    
T  11651116 ttttccatttcttaaattatttccaaattattttaaaataaaacaatgatatatcatattttaaattgttgtttgtaagaatgatatgttaggttcgttc 11651017  T
Q  148 ctacacaagaatttctc 164  Q
     || |||||||||||||    
T  11651016 ataaacaagaatttctc 11651000  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 72 - 166
Target Start/End: Complemental strand, 33214535 - 33214441
Alignment:
Q  72 taattattttaaaataaaacaatgacgtgtcatattttaatttgttgtttgtaagaatgatatgttaggttcgttcctacacaagaatttctcta 166  Q
    |||||||||||||| ||||||| |||||||||| ||||||||||||||||||||| |||||| ||||||||||||||||||||||||||||||||    
T  33214535 taattattttaaaagaaaacaacgacgtgtcatgttttaatttgttgtttgtaaggatgataggttaggttcgttcctacacaagaatttctcta 33214441  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 74; E-Value: 8e-34
Query Start/End: Original strand, 72 - 169
Target Start/End: Original strand, 27073080 - 27073177
Alignment:
Q  72 taattattttaaaataaaacaatgacgtgtcatattttaatttgttgtttgtaagaatgatatgttaggttcgttcctacacaagaatttctctataa 169  Q
    |||||||||||||| ||||||| |||||||||| ||||||||||||||||||||| |||||| |||||||||||||||||||||||||||||| ||||    
T  27073080 taattattttaaaagaaaacaacgacgtgtcatgttttaatttgttgtttgtaaggatgataggttaggttcgttcctacacaagaatttctcaataa 27073177  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 69; E-Value: 8e-31
Query Start/End: Original strand, 72 - 164
Target Start/End: Complemental strand, 36274211 - 36274120
Alignment:
Q  72 taattattttaaaataaaacaatgacgtgtcatattttaatttgttgtttgtaagaatgatatgttaggttcgttcctacacaagaatttctc 164  Q
    |||||||||||||| ||||||| |||||||||| ||||||||||||||||||||| |||||||||||||||||||||||||||| ||||||||    
T  36274211 taattattttaaaagaaaacaacgacgtgtcatgttttaatttgttgtttgtaaggatgatatgttaggttcgttcctacacaa-aatttctc 36274120  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 165 - 227
Target Start/End: Original strand, 33362144 - 33362206
Alignment:
Q  165 tataacttatgtgcatgaacataatttcgattaattattttttaattaataaataattggagg 227  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  33362144 tataacttatgtgcatgaacataatttcgattaattattttttaattaataaataattggagg 33362206  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 59; E-Value: 7e-25
Query Start/End: Original strand, 87 - 165
Target Start/End: Original strand, 33214626 - 33214704
Alignment:
Q  87 aaaacaatgacgtgtcatattttaatttgttgtttgtaagaatgatatgttaggttcgttcctacacaagaatttctct 165  Q
    ||||||| |||||||||| |||||||||||||||||||||  ||||| |||||||||||||||||||||||||||||||    
T  33214626 aaaacaacgacgtgtcatgttttaatttgttgtttgtaaggttgataggttaggttcgttcctacacaagaatttctct 33214704  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 87 - 164
Target Start/End: Complemental strand, 33219149 - 33219072
Alignment:
Q  87 aaaacaatgacgtgtcatattttaatttgttgtttgtaagaatgatatgttaggttcgttcctacacaagaatttctc 164  Q
    ||||||||||||  |||| ||||||||||||||||||||| |||||| ||||||||||||||||||||||||||||||    
T  33219149 aaaacaatgacgaatcatgttttaatttgttgtttgtaaggatgataggttaggttcgttcctacacaagaatttctc 33219072  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 87 - 162
Target Start/End: Complemental strand, 10598885 - 10598810
Alignment:
Q  87 aaaacaatgacgtgtcatattttaatttgttgtttgtaagaatgatatgttaggttcgttcctacacaagaatttc 162  Q
    ||||||| |||||||||| ||||||||||||||||||||  |||||| ||||||||||||||||||||||||||||    
T  10598885 aaaacaacgacgtgtcatgttttaatttgttgtttgtaaagatgataggttaggttcgttcctacacaagaatttc 10598810  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 355 - 428
Target Start/End: Original strand, 41359804 - 41359879
Alignment:
Q  355 gagagagacgccaca--cttacccaaaaccttaaggaaataggtttatgggtcctcttacttatagggtattcaac 428  Q
    |||||||||||||||  ||||||||||||||||||| ||| |||||||||||||||||||||||| ||||||||||    
T  41359804 gagagagacgccacattcttacccaaaaccttaaggcaatgggtttatgggtcctcttacttataaggtattcaac 41359879  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 87 - 165
Target Start/End: Original strand, 36274312 - 36274390
Alignment:
Q  87 aaaacaatgacgtgtcatattttaatttgttgtttgtaagaatgatatgttaggttcgttcctacacaagaatttctct 165  Q
    ||||||| |||||||||| ||||||||||||||||||||  |||||| ||||| |||||||||||| ||||||||||||    
T  36274312 aaaacaacgacgtgtcatgttttaatttgttgtttgtaaagatgataggttagattcgttcctacataagaatttctct 36274390  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 96 - 161
Target Start/End: Complemental strand, 36635305 - 36635241
Alignment:
Q  96 acgtgtcatattttaatttgttgtttgtaagaatgatatgttaggttcgttcctacacaagaattt 161  Q
    ||||||||| |||||||||||||||||||| ||||||| |||||||||||||||||||||||||||    
T  36635305 acgtgtcatgttttaatttgttgtttgtaacaatgata-gttaggttcgttcctacacaagaattt 36635241  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 348 - 428
Target Start/End: Complemental strand, 22304693 - 22304613
Alignment:
Q  348 caagcaagagagagacgccacacttacccaaaaccttaaggaaataggtttatgggtcctcttacttatagggtattcaac 428  Q
    ||||||||||||| ||  ||| ||||||||||||||||||| |||  ||||||||||||||||||||||| ||||||||||    
T  22304693 caagcaagagagacaccacactcttacccaaaaccttaaggcaatgtgtttatgggtcctcttacttataaggtattcaac 22304613  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 106 - 166
Target Start/End: Complemental strand, 27072971 - 27072911
Alignment:
Q  106 ttttaatttgttgtttgtaagaatgatatgttaggttcgttcctacacaagaatttctcta 166  Q
    ||||||||||||||||||||| ||||||  |||||||||||||||||||||||||||||||    
T  27072971 ttttaatttgttgtttgtaaggatgatagattaggttcgttcctacacaagaatttctcta 27072911  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 106 - 164
Target Start/End: Original strand, 10599004 - 10599062
Alignment:
Q  106 ttttaatttgttgtttgtaagaatgatatgttaggttcgttcctacacaagaatttctc 164  Q
    ||||||||||||||||||||| ||||||||||||||||||| | |||||||||||||||    
T  10599004 ttttaatttgttgtttgtaaggatgatatgttaggttcgtttccacacaagaatttctc 10599062  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 355 - 417
Target Start/End: Original strand, 47964557 - 47964621
Alignment:
Q  355 gagagagacgccacact--tacccaaaaccttaaggaaataggtttatgggtcctcttacttata 417  Q
    |||||||||||||||||  ||||||||||||||||| |||||||||||||||||||| |||||||    
T  47964557 gagagagacgccacactcttacccaaaaccttaaggcaataggtttatgggtcctctcacttata 47964621  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 348 - 428
Target Start/End: Complemental strand, 32589827 - 32589747
Alignment:
Q  348 caagcaagagagagacgccacacttacccaaaaccttaaggaaataggtttatgggtcctcttacttatagggtattcaac 428  Q
    ||||||||||||| |   ||| ||||||||||||||||||| ||| |||||||||||||||||||||||| ||| ||||||    
T  32589827 caagcaagagagacatcgcactcttacccaaaaccttaaggcaatgggtttatgggtcctcttacttataaggtgttcaac 32589747  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 326 - 428
Target Start/End: Original strand, 37990655 - 37990753
Alignment:
Q  326 gaggttagaacaatcacacaagcaagcaagagagagacgccacacttacccaaaaccttaaggaaataggtttatgggtcctcttacttatagggtattc 425  Q
    |||| |||||||||||||||||    ||||||||| ||  ||| ||||||||||||||||||| |||  ||||||| ||||||||||||||| ||| |||    
T  37990655 gaggctagaacaatcacacaag----caagagagacaccacactcttacccaaaaccttaaggcaatgagtttatgagtcctcttacttataaggtgttc 37990750  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 348 - 428
Target Start/End: Original strand, 12114596 - 12114676
Alignment:
Q  348 caagcaagagagagacgccacacttacccaaaaccttaaggaaataggtttatgggtcctcttacttatagggtattcaac 428  Q
    |||| |||||||| ||  ||| ||||||||||||||||||  ||| |||||||||||||||||||||||| ||| ||||||    
T  12114596 caagtaagagagacaccacactcttacccaaaaccttaagacaatgggtttatgggtcctcttacttataaggtgttcaac 12114676  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 356 - 428
Target Start/End: Original strand, 21832385 - 21832457
Alignment:
Q  356 agagagacgccacacttacccaaaaccttaaggaaataggtttatgggtcctcttacttatagggtattcaac 428  Q
    ||||||||||||| |||||||||||||||||||  ||  ||||||| ||||||||||||||| ||| ||||||    
T  21832385 agagagacgccactcttacccaaaaccttaaggctatgagtttatgagtcctcttacttataaggtgttcaac 21832457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 348 - 428
Target Start/End: Original strand, 32462934 - 32463014
Alignment:
Q  348 caagcaagagagagacgccacacttacccaaaaccttaaggaaataggtttatgggtcctcttacttatagggtattcaac 428  Q
    ||||||||||||| ||  ||| ||||| ||||||||||||| ||| |||||||| ||| ||||||||||| ||||||||||    
T  32462934 caagcaagagagacaccacactcttactcaaaaccttaaggcaatgggtttatgagtcttcttacttataaggtattcaac 32463014  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 348 - 428
Target Start/End: Complemental strand, 35946646 - 35946566
Alignment:
Q  348 caagcaagagagagacgccacacttacccaaaaccttaaggaaataggtttatgggtcctcttacttatagggtattcaac 428  Q
    ||||||||||||| ||  |||  |||||||||||||||||| ||  |||||||||||||||||||||||| ||| ||||||    
T  35946646 caagcaagagagacaccacacttttacccaaaaccttaaggcaacgggtttatgggtcctcttacttataaggtgttcaac 35946566  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 348 - 428
Target Start/End: Original strand, 43346825 - 43346905
Alignment:
Q  348 caagcaagagagagacgccacacttacccaaaaccttaaggaaataggtttatgggtcctcttacttatagggtattcaac 428  Q
    ||||||||||||| ||  ||| ||||||||||||||||||| |||  |||||||||| |||||||||||| ||| ||||||    
T  43346825 caagcaagagagacaccacactcttacccaaaaccttaaggcaatgagtttatgggttctcttacttataaggtgttcaac 43346905  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 348 - 427
Target Start/End: Original strand, 54018232 - 54018311
Alignment:
Q  348 caagcaagagagagacgccacacttacccaaaaccttaaggaaataggtttatgggtcctcttacttatagggtattcaa 427  Q
    |||||| |||||| ||  ||| |||||||||||||||||||   |||||||||||||||||||||||||| ||| |||||    
T  54018232 caagcatgagagacaccacactcttacccaaaaccttaaggcgttaggtttatgggtcctcttacttataaggtgttcaa 54018311  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 326 - 428
Target Start/End: Complemental strand, 15772996 - 15772898
Alignment:
Q  326 gaggttagaacaatcacacaagcaagcaagagagagacgccacacttacccaaaaccttaaggaaataggtttatgggtcctcttacttatagggtattc 425  Q
    ||||||||||||| ||||||||||||    ||||| ||  ||| |||| |||||||||||| | |||  ||||||||||||||||||||||| ||| |||    
T  15772996 gaggttagaacaaccacacaagcaag----agagacaccacactcttatccaaaaccttaaagcaatgagtttatgggtcctcttacttataaggtgttc 15772901  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 348 - 417
Target Start/End: Original strand, 22303989 - 22304058
Alignment:
Q  348 caagcaagagagagacgccacacttacccaaaaccttaaggaaataggtttatgggtcctcttacttata 417  Q
    ||||||||||||| ||  ||| |||| |||||||||||||| ||| ||||||||||||| ||||||||||    
T  22303989 caagcaagagagacaccacactcttatccaaaaccttaaggcaatgggtttatgggtccgcttacttata 22304058  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 354 - 428
Target Start/End: Original strand, 33803290 - 33803366
Alignment:
Q  354 agagagagacgccacact--tacccaaaaccttaaggaaataggtttatgggtcctcttacttatagggtattcaac 428  Q
    |||| |||||||||||||  ||||||| ||||||| | ||| |||||||||||||||||||||||| ||| ||||||    
T  33803290 agagggagacgccacactcttacccaataccttaatgcaatgggtttatgggtcctcttacttatatggtgttcaac 33803366  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 370 - 414
Target Start/End: Original strand, 22303715 - 22303759
Alignment:
Q  370 cttacccaaaaccttaaggaaataggtttatgggtcctcttactt 414  Q
    ||||||||||||||||||| ||| |||||||||||||||||||||    
T  22303715 cttacccaaaaccttaaggcaatgggtttatgggtcctcttactt 22303759  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 349 - 417
Target Start/End: Original strand, 29644937 - 29645005
Alignment:
Q  349 aagcaagagagagacgccacacttacccaaaaccttaaggaaataggtttatgggtcctcttacttata 417  Q
    ||||||||||||  |  ||| ||||||||||||||||||  ||| ||||||||||||||||||||||||    
T  29644937 aagcaagagagacgccacactcttacccaaaaccttaagacaatgggtttatgggtcctcttacttata 29645005  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 348 - 428
Target Start/End: Original strand, 54017850 - 54017930
Alignment:
Q  348 caagcaagagagagacgccacacttacccaaaaccttaaggaaataggtttatgggtcctcttacttatagggtattcaac 428  Q
    |||| |||||||| ||  ||| |||||||||||||||||||   |||||||||| ||||||||||||||| ||| ||||||    
T  54017850 caagtaagagagacaccacactcttacccaaaaccttaaggcgttaggtttatgagtcctcttacttataaggtgttcaac 54017930  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 370 - 417
Target Start/End: Original strand, 1634370 - 1634417
Alignment:
Q  370 cttacccaaaaccttaaggaaataggtttatgggtcctcttacttata 417  Q
    ||||||||||||||||||  ||| ||||||||||||||||||||||||    
T  1634370 cttacccaaaaccttaagccaatgggtttatgggtcctcttacttata 1634417  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 349 - 428
Target Start/End: Original strand, 29644616 - 29644695
Alignment:
Q  349 aagcaagagagagacgccacacttacccaaaaccttaaggaaataggtttatgggtcctcttacttatagggtattcaac 428  Q
    ||||||||||||  |  ||| ||||||||||||||||||  ||| ||||||||||| |||||||||||| ||| ||||||    
T  29644616 aagcaagagagacgccacactcttacccaaaaccttaagacaatgggtttatgggttctcttacttataaggtgttcaac 29644695  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 349 - 428
Target Start/End: Original strand, 37991012 - 37991091
Alignment:
Q  349 aagcaagagagagacgccacacttacccaaaaccttaaggaaataggtttatgggtcctcttacttatagggtattcaac 428  Q
    |||||||||||| ||  ||| |||||||||||||||||||  ||  |||||| |||||||||||||||| ||| ||||||    
T  37991012 aagcaagagagacaccacactcttacccaaaaccttaaggcgatgagtttataggtcctcttacttataaggtgttcaac 37991091  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 355 - 426
Target Start/End: Complemental strand, 8328023 - 8327950
Alignment:
Q  355 gagagagacgccacact--tacccaaaaccttaaggaaataggtttatgggtcctcttacttatagggtattca 426  Q
    ||||||||| |||||||  ||||||||||||||||| | || |||||||||| |||||||||||| | ||||||    
T  8328023 gagagagacaccacactcttacccaaaaccttaaggcattacgtttatgggttctcttacttataagatattca 8327950  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 348 - 417
Target Start/End: Original strand, 42342124 - 42342193
Alignment:
Q  348 caagcaagagagagacgccacacttacccaaaaccttaaggaaataggtttatgggtcctcttacttata 417  Q
    |||||||||||||  |  ||| ||||||||||||||||||| |||  ||||||| |||||||||||||||    
T  42342124 caagcaagagagacgccacactcttacccaaaaccttaaggcaatgagtttatgagtcctcttacttata 42342193  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 326 - 417
Target Start/End: Complemental strand, 15773336 - 15773247
Alignment:
Q  326 gaggttagaacaatcacacaagcaagcaagagagagacgccacacttacccaaaaccttaaggaaataggtttatgggtcctcttacttata 417  Q
    ||||||||||||| ||||||||||||||||||| |     ||| |||||||||||| |||||| |||  | ||||| |||||||||||||||    
T  15773336 gaggttagaacaaccacacaagcaagcaagagacatca--cactcttacccaaaactttaaggcaatgagcttatgagtcctcttacttata 15773247  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 348 - 428
Target Start/End: Original strand, 39934989 - 39935069
Alignment:
Q  348 caagcaagagagagacgccacacttacccaaaaccttaaggaaataggtttatgggtcctcttacttatagggtattcaac 428  Q
    ||||||||||||| |   ||| ||||| |||||| |||||| ||| ||||||||| |||||||||||||| ||| ||||||    
T  39934989 caagcaagagagacatcacactcttactcaaaactttaaggcaatgggtttatggatcctcttacttataaggtgttcaac 39935069  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 356 - 417
Target Start/End: Original strand, 42342428 - 42342491
Alignment:
Q  356 agagagacgccacact--tacccaaaaccttaaggaaataggtttatgggtcctcttacttata 417  Q
    ||||||||| ||||||  ||||||||||||||||  ||| | ||||||||||||||||||||||    
T  42342428 agagagacgtcacactcttacccaaaaccttaagacaatggatttatgggtcctcttacttata 42342491  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 356 - 417
Target Start/End: Complemental strand, 52634793 - 52634731
Alignment:
Q  356 agagagacgccacact--tacccaaaaccttaaggaaataggtttatgggtcctcttacttata 417  Q
    ||||||||| ||||||  ||||||||||||||||| ||| ||||||||||| ||||||||||||    
T  52634793 agagagacgtcacactcttacccaaaaccttaaggcaatgggtttatgggt-ctcttacttata 52634731  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 356 - 428
Target Start/End: Original strand, 32462598 - 32462672
Alignment:
Q  356 agagagacgccacact--tacccaaaaccttaaggaaataggtttatgggtcctcttacttatagggtattcaac 428  Q
    |||||||| |||||||  || |||||||||||| | ||||||||||||| || ||||||||||| ||| ||||||    
T  32462598 agagagaccccacactcttatccaaaaccttaaagcaataggtttatggatcatcttacttataaggtgttcaac 32462672  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 370 - 428
Target Start/End: Complemental strand, 39389172 - 39389114
Alignment:
Q  370 cttacccaaaaccttaaggaaataggtttatgggtcctcttacttatagggtattcaac 428  Q
    ||||||||||||||||||  ||| |||||||||||||||||| || || ||| ||||||    
T  39389172 cttacccaaaaccttaagacaatgggtttatgggtcctcttagttttaaggtgttcaac 39389114  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 42 - 83
Target Start/End: Original strand, 11651176 - 11651217
Alignment:
Q  42 cagttatttttcatttcttaaattatttcctaattattttaa 83  Q
    ||||| |||| ||||||||||||||||||| |||||||||||    
T  11651176 cagttcttttccatttcttaaattatttccaaattattttaa 11651217  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 355 - 417
Target Start/End: Original strand, 45395692 - 45395756
Alignment:
Q  355 gagagagacgccacact--tacccaaaaccttaaggaaataggtttatgggtcctcttacttata 417  Q
    ||||||||| |||||||  |||||||||| |||||  ||| ||||||||| ||||||||||||||    
T  45395692 gagagagacaccacactcttacccaaaacattaagacaatgggtttatggatcctcttacttata 45395756  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 348 - 428
Target Start/End: Original strand, 3135107 - 3135187
Alignment:
Q  348 caagcaagagagagacgccacacttacccaaaaccttaaggaaataggtttatgggtcctcttacttatagggtattcaac 428  Q
    ||||||||||||| ||  ||| ||||| |||||||||| || | | ||||||||||| || ||||||||| ||| ||||||    
T  3135107 caagcaagagagacaccacactcttactcaaaaccttatggcagtgggtttatgggttcttttacttataaggtgttcaac 3135187  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 356 - 417
Target Start/End: Original strand, 25739465 - 25739528
Alignment:
Q  356 agagagacgccacact--tacccaaaaccttaaggaaataggtttatgggtcctcttacttata 417  Q
    ||||||||| ||||||  |||||||||||| || | |||  |||||||||||||||||||||||    
T  25739465 agagagacgtcacactcttacccaaaacctaaaagcaatgagtttatgggtcctcttacttata 25739528  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 355 - 428
Target Start/End: Complemental strand, 39914371 - 39914296
Alignment:
Q  355 gagagagacgccacact--tacccaaaaccttaaggaaataggtttatgggtcctcttacttatagggtattcaac 428  Q
    ||||||||| |||||||  || ||||||  |||||| | |||||||||||||||||||| ||||| ||| ||||||    
T  39914371 gagagagacaccacactcttatccaaaatattaaggcattaggtttatgggtcctcttatttataaggtgttcaac 39914296  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 130; Significance: 3e-67; HSPs: 64)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 130; E-Value: 3e-67
Query Start/End: Original strand, 16 - 165
Target Start/End: Original strand, 5146619 - 5146768
Alignment:
Q  16 aaataatggttgagagagaggaagagcagttatttttcatttcttaaattatttcctaattattttaaaataaaacaatgacgtgtcatattttaatttg 115  Q
    |||||||||||||||||||||| ||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||    
T  5146619 aaataatggttgagagagaggaggaggagttatttttcatttcttaaattatttcctaattattttaaaataaaacaatgacgtgtcatgttttaatttg 5146718  T
Q  116 ttgtttgtaagaatgatatgttaggttcgttcctacacaagaatttctct 165  Q
    ||||||||||||||||||| ||||||||||| ||||||||||||||||||    
T  5146719 ttgtttgtaagaatgatatattaggttcgtttctacacaagaatttctct 5146768  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 124; E-Value: 1e-63
Query Start/End: Original strand, 16 - 164
Target Start/End: Original strand, 33377762 - 33377912
Alignment:
Q  16 aaataatggttgagagagaggaa--gagcagttatttttcatttcttaaattatttcctaattattttaaaataaaacaatgacgtgtcatattttaatt 113  Q
    ||||||||||||||||||||||   |||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||    
T  33377762 aaataatggttgagagagaggagaggagcagttattttttatttcttaaattatttcctaattattttaaaataaaacaatgacgtgtcatgttttaatt 33377861  T
Q  114 tgttgtttgtaagaatgatatgttaggttcgttcctacacaagaatttctc 164  Q
    ||||||||||||||||||||||||||||||||||||||| |||||||||||    
T  33377862 tgttgtttgtaagaatgatatgttaggttcgttcctacataagaatttctc 33377912  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 121; E-Value: 7e-62
Query Start/End: Original strand, 16 - 164
Target Start/End: Original strand, 13823264 - 13823412
Alignment:
Q  16 aaataatggttgagagagaggaagagcagttatttttcatttcttaaattatttcctaattattttaaaataaaacaatgacgtgtcatattttaatttg 115  Q
    ||||||||||||||| |||||| ||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||    
T  13823264 aaataatggttgagaaagaggaggagcaattatttttcatttcttaaattatttcctaattattttaaaataaaacaatgacgtgtcatgttttaatttg 13823363  T
Q  116 ttgtttgtaagaatgatatgttaggttcgttcctacacaagaatttctc 164  Q
    || ||||||| |||||||||||| |||||||||||||||||||||||||    
T  13823364 ttatttgtaaaaatgatatgttaagttcgttcctacacaagaatttctc 13823412  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 118; E-Value: 5e-60
Query Start/End: Original strand, 16 - 161
Target Start/End: Original strand, 35454566 - 35454710
Alignment:
Q  16 aaataatggttgagagagaggaagagcagttatttttcatttcttaaattatttcctaattattttaaaataaaacaatgacgtgtcatattttaatttg 115  Q
    |||||||||||||||||||||| ||||||||||||||||||||||||||||||||| ||||||||| || ||||||||||||||||||| ||||||||||    
T  35454566 aaataatggttgagagagaggacgagcagttatttttcatttcttaaattatttccaaattatttttaactaaaacaatgacgtgtcatgttttaatttg 35454665  T
Q  116 ttgtttgtaagaatgatatgttaggttcgttcctacacaagaattt 161  Q
    |||||||||||||||||| |||||||||||||||||||||||||||    
T  35454666 ttgtttgtaagaatgata-gttaggttcgttcctacacaagaattt 35454710  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 117; E-Value: 2e-59
Query Start/End: Original strand, 16 - 164
Target Start/End: Complemental strand, 228865 - 228717
Alignment:
Q  16 aaataatggttgagagagaggaagagcagttatttttcatttcttaaattatttcctaattattttaaaataaaacaatgacgtgtcatattttaatttg 115  Q
    |||||||||||||||||||||| ||||||||| |||||||||||||||||||||||||||||||||||||||||||||| ||||||||| |||||||||     
T  228865 aaataatggttgagagagaggaggagcagttagttttcatttcttaaattatttcctaattattttaaaataaaacaataacgtgtcatgttttaattta 228766  T
Q  116 ttgtttgtaagaatgatatgttaggttcgttcctacacaagaatttctc 164  Q
    |||||| ||||||||||||||||||||||||||||||||  ||||||||    
T  228765 ttgtttataagaatgatatgttaggttcgttcctacacagtaatttctc 228717  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 117; E-Value: 2e-59
Query Start/End: Original strand, 16 - 164
Target Start/End: Complemental strand, 6518351 - 6518203
Alignment:
Q  16 aaataatggttgagagagaggaagagcagttatttttcatttcttaaattatttcctaattattttaaaataaaacaatgacgtgtcatattttaatttg 115  Q
    |||||||||||||||||||||| || || ||||||||||||||||||||||||||| ||||||||||||||||||||||||| ||  || ||||||||||    
T  6518351 aaataatggttgagagagaggaggaacaattatttttcatttcttaaattatttccaaattattttaaaataaaacaatgacatgcaatgttttaatttg 6518252  T
Q  116 ttgtttgtaagaatgatatgttaggttcgttcctacacaagaatttctc 164  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||    
T  6518251 ttgtttgtaagaatgatatgttaggttcgttcctacacaagaatttctc 6518203  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 102; E-Value: 2e-50
Query Start/End: Original strand, 48 - 165
Target Start/End: Complemental strand, 8489239 - 8489122
Alignment:
Q  48 tttttcatttcttaaattatttcctaattattttaaaataaaacaatgacgtgtcatattttaatttgttgtttgtaagaatgatatgttaggttcgttc 147  Q
    |||| ||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| || ||||    
T  8489239 ttttccatttcttaaattatttccaaattattttaaaataaaacaatgacgtgtcatattttaatttgttgtttgtaagaatgatatgttagatttgttc 8489140  T
Q  148 ctacacaagaatttctct 165  Q
    ||||||||||||||||||    
T  8489139 ctacacaagaatttctct 8489122  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 90; E-Value: 2e-43
Query Start/End: Original strand, 19 - 147
Target Start/End: Original strand, 40881940 - 40882066
Alignment:
Q  19 taatggttgagagagaggaagagcagttatttttcatttcttaaattatttcctaattattttaaaataaaacaatgacgtgtcatattttaatttgttg 118  Q
    |||||||||||||||| |  ||| |||| |||| ||||||||||||||||||| |||||||||||||||||||||| |||||||||||||||||||||||    
T  40881940 taatggttgagagagaag--gagtagttgttttccatttcttaaattatttccaaattattttaaaataaaacaataacgtgtcatattttaatttgttg 40882037  T
Q  119 tttgtaagaatgatatgttaggttcgttc 147  Q
    ||||||||||||||||||||| |||||||    
T  40882038 tttgtaagaatgatatgttagattcgttc 40882066  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 86; E-Value: 6e-41
Query Start/End: Original strand, 48 - 164
Target Start/End: Complemental strand, 40881906 - 40881792
Alignment:
Q  48 tttttcatttcttaaattatttcctaattattttaaaataaaacaatgacgtgtcatattttaatttgttgtttgtaagaatgatatgttaggttcgttc 147  Q
    |||||||||||||||||||||||| |||||||||||||||||||||||||||||||| ||||||||| ||||||||||||||   |||||||||||||||    
T  40881906 tttttcatttcttaaattatttccaaattattttaaaataaaacaatgacgtgtcatgttttaatttattgtttgtaagaat--aatgttaggttcgttc 40881809  T
Q  148 ctacacaagaatttctc 164  Q
    |||||||| ||||||||    
T  40881808 ctacacaacaatttctc 40881792  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 76; E-Value: 5e-35
Query Start/End: Original strand, 72 - 167
Target Start/End: Original strand, 8323880 - 8323975
Alignment:
Q  72 taattattttaaaataaaacaatgacgtgtcatattttaatttgttgtttgtaagaatgatatgttaggttcgttcctacacaagaatttctctat 167  Q
    |||||||||||||| ||||||| |||||||||| ||||||||||||||||||||| ||||||||||||||||||||||||||||||||||| ||||    
T  8323880 taattattttaaaagaaaacaacgacgtgtcatgttttaatttgttgtttgtaaggatgatatgttaggttcgttcctacacaagaatttcactat 8323975  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 76; E-Value: 5e-35
Query Start/End: Original strand, 73 - 164
Target Start/End: Original strand, 19898927 - 19899018
Alignment:
Q  73 aattattttaaaataaaacaatgacgtgtcatattttaatttgttgtttgtaagaatgatatgttaggttcgttcctacacaagaatttctc 164  Q
    ||||||||||||||||||||||||| |||||| |||||||||||||||| ||| ||||||||||||||||||||||||||||||||||||||    
T  19898927 aattattttaaaataaaacaatgacatgtcatgttttaatttgttgtttataaaaatgatatgttaggttcgttcctacacaagaatttctc 19899018  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 74; E-Value: 8e-34
Query Start/End: Original strand, 72 - 165
Target Start/End: Original strand, 26534670 - 26534763
Alignment:
Q  72 taattattttaaaataaaacaatgacgtgtcatattttaatttgttgtttgtaagaatgatatgttaggttcgttcctacacaagaatttctct 165  Q
    |||||||||||||| ||||||| |||||||||| ||||||||||||||||||||| |||||| |||||||||||||||||||||||||||||||    
T  26534670 taattattttaaaagaaaacaacgacgtgtcatgttttaatttgttgtttgtaaggatgataggttaggttcgttcctacacaagaatttctct 26534763  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 66; E-Value: 5e-29
Query Start/End: Original strand, 72 - 161
Target Start/End: Original strand, 42630879 - 42630968
Alignment:
Q  72 taattattttaaaataaaacaatgacgtgtcatattttaatttgttgtttgtaagaatgatatgttaggttcgttcctacacaagaattt 161  Q
    |||||||||||||| ||||||| |||||||||||||||||||| ||||||||||| |||||| ||||||||||| |||||||||||||||    
T  42630879 taattattttaaaagaaaacaacgacgtgtcatattttaatttattgtttgtaaggatgataggttaggttcgtgcctacacaagaattt 42630968  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 72 - 164
Target Start/End: Complemental strand, 791684 - 791592
Alignment:
Q  72 taattattttaaaataaaacaatgacgtgtcatattttaatttgttgtttgtaagaatgatatgttaggttcgttcctacacaagaatttctc 164  Q
    |||||||||||||| ||||||| |||||||||| ||||||||||||||||||||| ||| || ||||||||||||||||||||| ||||||||    
T  791684 taattattttaaaagaaaacaacgacgtgtcatgttttaatttgttgtttgtaaggatggtaggttaggttcgttcctacacaaaaatttctc 791592  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 16 - 149
Target Start/End: Original strand, 27319595 - 27319716
Alignment:
Q  16 aaataatggttgagagagaggaagagcagttatttttcatttcttaaattatttcctaattattttaaaataaaacaatgacgtgtcatattttaatttg 115  Q
    ||||||||||||||||||||||  |||| ||||||||||||||||||||            |||||||||||||||||||| || |||||||||||||||    
T  27319595 aaataatggttgagagagaggagaagcaattatttttcatttcttaaat------------attttaaaataaaacaatgatgtttcatattttaatttg 27319682  T
Q  116 ttgtttgtaagaatgatatgttaggttcgttcct 149  Q
    |||||||||||||||||||||||| || ||||||    
T  27319683 ttgtttgtaagaatgatatgttagattggttcct 27319716  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 61; E-Value: 5e-26
Query Start/End: Original strand, 72 - 164
Target Start/End: Original strand, 130420 - 130512
Alignment:
Q  72 taattattttaaaataaaacaatgacgtgtcatattttaatttgttgtttgtaagaatgatatgttaggttcgttcctacacaagaatttctc 164  Q
    |||||||||||||| ||||||| ||||||| || ||||||||||||||||||||| |||||| |||||||||||| ||||| |||||||||||    
T  130420 taattattttaaaagaaaacaacgacgtgttatgttttaatttgttgtttgtaaggatgataggttaggttcgttactacaaaagaatttctc 130512  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 87 - 164
Target Start/End: Complemental strand, 26534583 - 26534506
Alignment:
Q  87 aaaacaatgacgtgtcatattttaatttgttgtttgtaagaatgatatgttaggttcgttcctacacaagaatttctc 164  Q
    ||||||| |||||||||| |||||||||||||||||||||  ||||| ||||||||||||||||||||||||||||||    
T  26534583 aaaacaacgacgtgtcatgttttaatttgttgtttgtaaggttgataggttaggttcgttcctacacaagaatttctc 26534506  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 87 - 164
Target Start/End: Complemental strand, 35454527 - 35454451
Alignment:
Q  87 aaaacaatgacgtgtcatattttaatttgttgtttgtaagaatgatatgttaggttcgttcctacacaagaatttctc 164  Q
    |||| ||||||||||||| |||||||||||||||||||||||||||| ||||||||||||| ||||||||||||||||    
T  35454527 aaaaaaatgacgtgtcatgttttaatttgttgtttgtaagaatgata-gttaggttcgttcatacacaagaatttctc 35454451  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 92 - 164
Target Start/End: Original strand, 14388512 - 14388583
Alignment:
Q  92 aatgacgtgtcatattttaatttgttgtttgtaagaatgatatgttaggttcgttcctacacaagaatttctc 164  Q
    ||||||||||||| |||||||||||||||||||||||||||| |||||||| |||||||||||||||||||||    
T  14388512 aatgacgtgtcatgttttaatttgttgtttgtaagaatgata-gttaggtttgttcctacacaagaatttctc 14388583  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 87 - 165
Target Start/End: Complemental strand, 130331 - 130253
Alignment:
Q  87 aaaacaatgacgtgtcatattttaatttgttgtttgtaagaatgatatgttaggttcgttcctacacaagaatttctct 165  Q
    ||||||| |||||||||| |||||||||||||||||||||  ||| | |||||||||||||||||||||||||||||||    
T  130331 aaaacaacgacgtgtcatgttttaatttgttgtttgtaaggttgacaggttaggttcgttcctacacaagaatttctct 130253  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 87 - 165
Target Start/End: Original strand, 6518390 - 6518467
Alignment:
Q  87 aaaacaatgacgtgtcatattttaatttgttgtttgtaagaatgatatgttaggttcgttcctacacaagaatttctct 165  Q
    |||| ||||| || ||||||||||||||||||||||||||||||||| |||||||||||| ||||||||||||||||||    
T  6518390 aaaaaaatgatgtatcatattttaatttgttgtttgtaagaatgata-gttaggttcgttactacacaagaatttctct 6518467  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 87 - 164
Target Start/End: Complemental strand, 8323784 - 8323707
Alignment:
Q  87 aaaacaatgacgtgtcatattttaatttgttgtttgtaagaatgatatgttaggttcgttcctacacaagaatttctc 164  Q
    ||||||| |||||||||| ||||||||| ||||||||||  |||||| ||||||||||||||||||||||||||||||    
T  8323784 aaaacaacgacgtgtcatgttttaatttattgtttgtaaagatgataggttaggttcgttcctacacaagaatttctc 8323707  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 96 - 165
Target Start/End: Complemental strand, 14069928 - 14069860
Alignment:
Q  96 acgtgtcatattttaatttgttgtttgtaagaatgatatgttaggttcgttcctacacaagaatttctct 165  Q
    ||||||||| |||||||||||||||| ||||||||||| |||||||||||||||||||||||||||||||    
T  14069928 acgtgtcatgttttaatttgttgtttataagaatgata-gttaggttcgttcctacacaagaatttctct 14069860  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 87 - 164
Target Start/End: Complemental strand, 42630788 - 42630711
Alignment:
Q  87 aaaacaatgacgtgtcatattttaatttgttgtttgtaagaatgatatgttaggttcgttcctacacaagaatttctc 164  Q
    |||||||||| ||||||| ||||| ||||||||||||||| |||||| ||||||||||||| ||||||||||||||||    
T  42630788 aaaacaatgaagtgtcatgttttagtttgttgtttgtaaggatgataggttaggttcgttcatacacaagaatttctc 42630711  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 93 - 161
Target Start/End: Complemental strand, 19897295 - 19897228
Alignment:
Q  93 atgacgtgtcatattttaatttgttgtttgtaagaatgatatgttaggttcgttcctacacaagaattt 161  Q
    |||||||||||| |||||||||||||||||||||||||||| ||||||||||||||||||||| |||||    
T  19897295 atgacgtgtcatgttttaatttgttgtttgtaagaatgata-gttaggttcgttcctacacaataattt 19897228  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 87 - 164
Target Start/End: Complemental strand, 5146580 - 5146504
Alignment:
Q  87 aaaacaatgacgtgtcatattttaatttgttgtttgtaagaatgatatgttaggttcgttcctacacaagaatttctc 164  Q
    |||| ||| ||||||||| ||||||||| |||||||||||||||||| ||||||||||||||||||||| ||||||||    
T  5146580 aaaaaaataacgtgtcatgttttaatttattgtttgtaagaatgata-gttaggttcgttcctacacaataatttctc 5146504  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 348 - 428
Target Start/End: Original strand, 13415794 - 13415874
Alignment:
Q  348 caagcaagagagagacgccacacttacccaaaaccttaaggaaataggtttatgggtcctcttacttatagggtattcaac 428  Q
    |||||||||||||  |  ||| ||||||||||||||||||| |||||||||||||||||||||||||||| ||| ||||||    
T  13415794 caagcaagagagacgccacactcttacccaaaaccttaaggtaataggtttatgggtcctcttacttataaggtgttcaac 13415874  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 107 - 164
Target Start/End: Original strand, 791810 - 791867
Alignment:
Q  107 tttaatttgttgtttgtaagaatgatatgttaggttcgttcctacacaagaatttctc 164  Q
    |||||||||||||||||||  |||||| ||||||||||||||||||||||||||||||    
T  791810 tttaatttgttgtttgtaaagatgataggttaggttcgttcctacacaagaatttctc 791867  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 351 - 428
Target Start/End: Complemental strand, 25328056 - 25327979
Alignment:
Q  351 gcaagagagagacgccacacttacccaaaaccttaaggaaataggtttatgggtcctcttacttatagggtattcaac 428  Q
    |||||||||| ||  ||| ||||||||||||||||||| | |||||||||||||||||||||||||| ||| ||||||    
T  25328056 gcaagagagacaccacactcttacccaaaaccttaaggcattaggtttatgggtcctcttacttataaggtgttcaac 25327979  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 348 - 428
Target Start/End: Original strand, 18603154 - 18603234
Alignment:
Q  348 caagcaagagagagacgccacacttacccaaaaccttaaggaaataggtttatgggtcctcttacttatagggtattcaac 428  Q
    |||||||||||||  |  ||| ||||||||||||||||||| ||| |||||||||||||||||||||||| ||| ||||||    
T  18603154 caagcaagagagatgccacactcttacccaaaaccttaaggcaatgggtttatgggtcctcttacttataaggtgttcaac 18603234  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 355 - 428
Target Start/End: Complemental strand, 26074731 - 26074656
Alignment:
Q  355 gagagagacgccacact--tacccaaaaccttaaggaaataggtttatgggtcctcttacttatagggtattcaac 428  Q
    ||||||||| |||||||  ||||||||||||||||| ||| |||||||||||||||||||||||| ||| ||||||    
T  26074731 gagagagacaccacactcttacccaaaaccttaaggcaatgggtttatgggtcctcttacttataaggtgttcaac 26074656  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 348 - 428
Target Start/End: Original strand, 40296349 - 40296429
Alignment:
Q  348 caagcaagagagagacgccacacttacccaaaaccttaaggaaataggtttatgggtcctcttacttatagggtattcaac 428  Q
    ||||||||||||| ||  ||| |||||||||||||| |||| ||| |||||||||||||||||||||||| ||| ||||||    
T  40296349 caagcaagagagacaccacactcttacccaaaacctcaaggcaatgggtttatgggtcctcttacttataaggtgttcaac 40296429  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 355 - 417
Target Start/End: Original strand, 1028556 - 1028620
Alignment:
Q  355 gagagagacgccacact--tacccaaaaccttaaggaaataggtttatgggtcctcttacttata 417  Q
    |||||||||||||||||  |||| ||||||||||||  |||||||||||||||||||||||||||    
T  1028556 gagagagacgccacactcttaccaaaaaccttaaggttataggtttatgggtcctcttacttata 1028620  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 96 - 165
Target Start/End: Complemental strand, 13823217 - 13823149
Alignment:
Q  96 acgtgtcatattttaatttgttgtttgtaagaatgatatgttaggttcgttcctacacaagaatttctct 165  Q
    ||||||||| ||||| ||| |||||| || |||||||| |||||||||||||||||||||||||||||||    
T  13823217 acgtgtcatgttttagtttattgtttatacgaatgata-gttaggttcgttcctacacaagaatttctct 13823149  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 371 - 428
Target Start/End: Original strand, 26075219 - 26075276
Alignment:
Q  371 ttacccaaaaccttaaggaaataggtttatgggtcctcttacttatagggtattcaac 428  Q
    |||||||||||||||||| ||| |||||||||||||||||||||||| ||| ||||||    
T  26075219 ttacccaaaaccttaaggcaatgggtttatgggtcctcttacttataaggtgttcaac 26075276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 370 - 419
Target Start/End: Complemental strand, 32487495 - 32487446
Alignment:
Q  370 cttacccaaaaccttaaggaaataggtttatgggtcctcttacttatagg 419  Q
    ||||||||||||||||||| ||| ||||||||||||||||||||||||||    
T  32487495 cttacccaaaaccttaaggcaatgggtttatgggtcctcttacttatagg 32487446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 348 - 428
Target Start/End: Complemental strand, 6500574 - 6500494
Alignment:
Q  348 caagcaagagagagacgccacacttacccaaaaccttaaggaaataggtttatgggtcctcttacttatagggtattcaac 428  Q
    ||||||||||||| ||  ||| ||||||||||||||||||| ||| ||||||  |||||||||||||||| ||| ||||||    
T  6500574 caagcaagagagacaccacactcttacccaaaaccttaaggcaatgggtttaaaggtcctcttacttataaggtgttcaac 6500494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 352 - 428
Target Start/End: Original strand, 9498692 - 9498768
Alignment:
Q  352 caagagagagacgccacacttacccaaaaccttaaggaaataggtttatgggtcctcttacttatagggtattcaac 428  Q
    ||||||||| ||  ||| ||||||||||| ||||||| ||| |||||||||||||||||||||||| ||| ||||||    
T  9498692 caagagagacaccacactcttacccaaaatcttaaggcaatgggtttatgggtcctcttacttataaggtgttcaac 9498768  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 348 - 428
Target Start/End: Original strand, 11417011 - 11417091
Alignment:
Q  348 caagcaagagagagacgccacacttacccaaaaccttaaggaaataggtttatgggtcctcttacttatagggtattcaac 428  Q
    |||||||||||||||   ||| ||||| ||||||||||||| ||| ||||||||| |||||||||||||| ||| ||||||    
T  11417011 caagcaagagagagatcacactcttacacaaaaccttaaggcaatgggtttatggatcctcttacttataaggtgttcaac 11417091  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 348 - 428
Target Start/End: Original strand, 34753059 - 34753139
Alignment:
Q  348 caagcaagagagagacgccacacttacccaaaaccttaaggaaataggtttatgggtcctcttacttatagggtattcaac 428  Q
    |||||||||||||  |  ||| ||||||||||||||||||| ||| |||||||||||| ||||||||||| ||| ||||||    
T  34753059 caagcaagagagacgccacactcttacccaaaaccttaaggcaatcggtttatgggtcttcttacttataaggtgttcaac 34753139  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #41
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 356 - 428
Target Start/End: Complemental strand, 15370520 - 15370446
Alignment:
Q  356 agagagacgccacact--tacccaaaaccttaaggaaataggtttatgggtcctcttacttatagggtattcaac 428  Q
    ||||||||||||||||  ||| |||||||||||||  || |||||||||||||||||||||||| ||| ||||||    
T  15370520 agagagacgccacactcttacgcaaaaccttaaggctatgggtttatgggtcctcttacttataaggtgttcaac 15370446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #42
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 370 - 417
Target Start/End: Complemental strand, 41170736 - 41170689
Alignment:
Q  370 cttacccaaaaccttaaggaaataggtttatgggtcctcttacttata 417  Q
    ||||||||||||||||||| ||| ||||||||||||||||||||||||    
T  41170736 cttacccaaaaccttaaggcaatgggtttatgggtcctcttacttata 41170689  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #43
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 356 - 417
Target Start/End: Original strand, 26074821 - 26074885
Alignment:
Q  356 agagagacgccacact---tacccaaaaccttaaggaaataggtttatgggtcctcttacttata 417  Q
    ||||||||||||||||   ||||||||||||||||  ||||||||||||||||||| ||||||||    
T  26074821 agagagacgccacactctttacccaaaaccttaagacaataggtttatgggtcctcctacttata 26074885  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #44
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 375 - 428
Target Start/End: Original strand, 3295405 - 3295458
Alignment:
Q  375 ccaaaaccttaaggaaataggtttatgggtcctcttacttatagggtattcaac 428  Q
    |||||||||||||| ||| |||||||||||||||||||||||| ||| ||||||    
T  3295405 ccaaaaccttaaggcaattggtttatgggtcctcttacttataaggtgttcaac 3295458  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #45
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 16 - 65
Target Start/End: Original strand, 19897342 - 19897391
Alignment:
Q  16 aaataatggttgagagagaggaagagcagttatttttcatttcttaaatt 65  Q
    |||||||||||||||||||||| || || |||||||||||||||||||||    
T  19897342 aaataatggttgagagagaggaggaacatttatttttcatttcttaaatt 19897391  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #46
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 348 - 417
Target Start/End: Original strand, 27502070 - 27502139
Alignment:
Q  348 caagcaagagagagacgccacacttacccaaaaccttaaggaaataggtttatgggtcctcttacttata 417  Q
    ||||||||||||| ||  |||  ||||| |||| ||||||| ||||||||||||||||||||||||||||    
T  27502070 caagcaagagagacaccacacttttaccaaaaatcttaaggcaataggtttatgggtcctcttacttata 27502139  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #47
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 348 - 428
Target Start/End: Complemental strand, 41632906 - 41632826
Alignment:
Q  348 caagcaagagagagacgccacacttacccaaaaccttaaggaaataggtttatgggtcctcttacttatagggtattcaac 428  Q
    ||||||||||||| ||  ||| ||||||||||| ||||| | | | |||||||||||||||||||||||| ||| ||||||    
T  41632906 caagcaagagagacaccacactcttacccaaaatcttaaagcattgggtttatgggtcctcttacttataaggtgttcaac 41632826  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #48
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 106 - 161
Target Start/End: Original strand, 228990 - 229044
Alignment:
Q  106 ttttaatttgttgtttgtaagaatgatatgttaggttcgttcctacacaagaattt 161  Q
    |||||||||||||||||||||||||||| |||| ||||||| |||||||| |||||    
T  228990 ttttaatttgttgtttgtaagaatgata-gttatgttcgtttctacacaaaaattt 229044  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #49
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 356 - 428
Target Start/End: Original strand, 3295055 - 3295129
Alignment:
Q  356 agagagacgccacact--tacccaaaaccttaaggaaataggtttatgggtcctcttacttatagggtattcaac 428  Q
    |||||||| |||||||  |||||||||||| |||| ||| |||||||||||| ||||||||||| ||| ||||||    
T  3295055 agagagacaccacactcatacccaaaacctcaaggcaatgggtttatgggtcttcttacttataaggtgttcaac 3295129  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #50
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 352 - 428
Target Start/End: Original strand, 36568603 - 36568681
Alignment:
Q  352 caagagagagacgccacact--tacccaaaaccttaaggaaataggtttatgggtcctcttacttatagggtattcaac 428  Q
    ||||||||||||||||||||  |||| |||||||||||| ||| |||||| ||||| ||| ||||||| ||| ||||||    
T  36568603 caagagagagacgccacactcttaccaaaaaccttaaggcaatgggtttacgggtcatctcacttataaggtgttcaac 36568681  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #51
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 348 - 417
Target Start/End: Complemental strand, 15370223 - 15370154
Alignment:
Q  348 caagcaagagagagacgccacacttacccaaaaccttaaggaaataggtttatgggtcctcttacttata 417  Q
    ||||||||||||| ||  ||| |||||||||||||||||||   | | ||||||||||||||||||||||    
T  15370223 caagcaagagagacaccacactcttacccaaaaccttaaggctgtggatttatgggtcctcttacttata 15370154  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #52
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 355 - 412
Target Start/End: Original strand, 26074185 - 26074244
Alignment:
Q  355 gagagagacgccacact--tacccaaaaccttaaggaaataggtttatgggtcctcttac 412  Q
    ||||||||| |||||||  ||||||||||||||||| ||| |||| ||||||||||||||    
T  26074185 gagagagacaccacactcttacccaaaaccttaaggcaatgggttcatgggtcctcttac 26074244  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #53
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 348 - 428
Target Start/End: Original strand, 36492251 - 36492331
Alignment:
Q  348 caagcaagagagagacgccacacttacccaaaaccttaaggaaataggtttatgggtcctcttacttatagggtattcaac 428  Q
    ||||||||||||| ||  ||| |||| ||||||||| |||| |||  |||||| |||||||||||||||| ||| ||||||    
T  36492251 caagcaagagagacaccacactcttatccaaaacctaaaggtaatgtgtttattggtcctcttacttataaggtgttcaac 36492331  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #54
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 370 - 409
Target Start/End: Original strand, 36521952 - 36521991
Alignment:
Q  370 cttacccaaaaccttaaggaaataggtttatgggtcctct 409  Q
    ||||||||||||||||||| ||| ||||||||||||||||    
T  36521952 cttacccaaaaccttaaggcaattggtttatgggtcctct 36521991  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #55
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 370 - 428
Target Start/End: Complemental strand, 6224298 - 6224240
Alignment:
Q  370 cttacccaaaaccttaaggaaataggtttatgggtcctcttacttatagggtattcaac 428  Q
    |||||| ||||||||||||  ||  ||||||||||||||||||||||| ||| ||||||    
T  6224298 cttaccaaaaaccttaaggcgatgagtttatgggtcctcttacttataaggtgttcaac 6224240  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #56
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 370 - 428
Target Start/End: Original strand, 42405652 - 42405710
Alignment:
Q  370 cttacccaaaaccttaaggaaataggtttatgggtcctcttacttatagggtattcaac 428  Q
    ||||||||||||||||||| | |||||||||| ||||| |||||| || ||| ||||||    
T  42405652 cttacccaaaaccttaaggcattaggtttatgagtccttttacttgtaaggtgttcaac 42405710  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #57
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 358 - 428
Target Start/End: Complemental strand, 299605 - 299533
Alignment:
Q  358 agagacgccacact--tacccaaaaccttaaggaaataggtttatgggtcctcttacttatagggtattcaac 428  Q
    ||||||||||||||  ||| |||||||||||||  ||  ||||||||||| ||||||||||| ||| ||||||    
T  299605 agagacgccacactcttacacaaaaccttaaggctatgagtttatgggtcatcttacttataaggtgttcaac 299533  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #58
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 355 - 417
Target Start/End: Complemental strand, 624315 - 624251
Alignment:
Q  355 gagagagacgccacact--tacccaaaaccttaaggaaataggtttatgggtcctcttacttata 417  Q
    ||||||||| |||||||  |||||||||||| ||||  || |||||||||||| |||||||||||    
T  624315 gagagagacaccacactcttacccaaaacctcaaggctatgggtttatgggtcatcttacttata 624251  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #59
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 370 - 415
Target Start/End: Complemental strand, 2411109 - 2411064
Alignment:
Q  370 cttacccaaaaccttaaggaaataggtttatgggtcctcttactta 415  Q
    ||||| ||||||||||||| |||| |||||||||| ||||||||||    
T  2411109 cttactcaaaaccttaaggcaataagtttatgggttctcttactta 2411064  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #60
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 349 - 426
Target Start/End: Original strand, 29549290 - 29549367
Alignment:
Q  349 aagcaagagagagacgccacacttacccaaaaccttaaggaaataggtttatgggtcctcttacttatagggtattca 426  Q
    ||||||||||||  |  ||| |||| |||||||||||||| |||  ||||||||||| ||||||||||| ||| ||||    
T  29549290 aagcaagagagacgccacactcttatccaaaaccttaaggtaatgtgtttatgggtcttcttacttatatggtgttca 29549367  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #61
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 355 - 417
Target Start/End: Original strand, 36522276 - 36522340
Alignment:
Q  355 gagagagacgccacact--tacccaaaaccttaaggaaataggtttatgggtcctcttacttata 417  Q
    ||||||||| |||||||  ||||||||||||||||  ||| ||||||| |||||||| |||||||    
T  36522276 gagagagacaccacactcttacccaaaaccttaagataatgggtttattggtcctctcacttata 36522340  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #62
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 348 - 428
Target Start/End: Complemental strand, 6500946 - 6500866
Alignment:
Q  348 caagcaagagagagacgccacacttacccaaaaccttaaggaaataggtttatgggtcctcttacttatagggtattcaac 428  Q
    |||| |||||||| ||  ||| |||| |||||||||||||| |||  ||||||||||||| ||| ||||| ||| ||||||    
T  6500946 caagtaagagagacaccacactcttatccaaaaccttaaggcaatgagtttatgggtccttttatttataaggtgttcaac 6500866  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #63
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 355 - 428
Target Start/End: Original strand, 26590949 - 26591024
Alignment:
Q  355 gagagagacgccacact--tacccaaaaccttaaggaaataggtttatgggtcctcttacttatagggtattcaac 428  Q
    |||||||||||||||||  ||| ||||||||||||| | |   ||||||| |||||||||||||| ||| ||||||    
T  26590949 gagagagacgccacactcttactcaaaaccttaaggcattgaatttatggatcctcttacttataaggtgttcaac 26591024  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #64
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 355 - 428
Target Start/End: Complemental strand, 35150125 - 35150051
Alignment:
Q  355 gagagagacgccacactt--acccaaaaccttaaggaaataggtttatgggtcctcttacttatagggtattcaac 428  Q
    ||||||||| ||||||||  |||||||||||||||  ||| | ||||||||| |||||||||||| ||| ||||||    
T  35150125 gagagagacaccacacttttacccaaaaccttaagacaatggatttatgggt-ctcttacttataaggtgttcaac 35150051  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 129; Significance: 1e-66; HSPs: 54)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 129; E-Value: 1e-66
Query Start/End: Original strand, 16 - 164
Target Start/End: Original strand, 2814360 - 2814508
Alignment:
Q  16 aaataatggttgagagagaggaagagcagttatttttcatttcttaaattatttcctaattattttaaaataaaacaatgacgtgtcatattttaatttg 115  Q
    |||||||||||||||||||||| ||||| ||||||||||||||||||||||||||||||||||||| ||| |||||||||||||||||| ||||||||||    
T  2814360 aaataatggttgagagagaggaggagcaattatttttcatttcttaaattatttcctaattatttttaaaaaaaacaatgacgtgtcatgttttaatttg 2814459  T
Q  116 ttgtttgtaagaatgatatgttaggttcgttcctacacaagaatttctc 164  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||    
T  2814460 ttgtttgtaagaatgatatgttaggttcgttcctacacaagaatttctc 2814508  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 127; E-Value: 2e-65
Query Start/End: Original strand, 16 - 166
Target Start/End: Complemental strand, 41539918 - 41539768
Alignment:
Q  16 aaataatggttgagagagaggaagagcagttatttttcatttcttaaattatttcctaattattttaaaataaaacaatgacgtgtcatattttaatttg 115  Q
    |||||||||||||||||||| | || |||||||||||||||||||||||||||||  ||||||||||||||||||||| |||||||||||||||||||||    
T  41539918 aaataatggttgagagagagaaggaacagttatttttcatttcttaaattatttcaaaattattttaaaataaaacaacgacgtgtcatattttaatttg 41539819  T
Q  116 ttgtttgtaagaatgatatgttaggttcgttcctacacaagaatttctcta 166  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||    
T  41539818 ttgtttgtaagaatgatatgttaggttcgttcctacacaagaatttctcta 41539768  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 124; E-Value: 1e-63
Query Start/End: Original strand, 16 - 174
Target Start/End: Original strand, 397123 - 397278
Alignment:
Q  16 aaataatggttgagagagaggaagagcagttatttttcatttcttaaattatttcctaattattttaaaataaaacaatgacgtgtcatattttaatttg 115  Q
    ||||||||||||||||||  || |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||    
T  397123 aaataatggttgagagag--gaggagcagttatttttcatttcttaaattatttcctaattattttaaaataaaacaatgacgtgtcatgttttaatttg 397220  T
Q  116 ttgtttgtaagaatgatatgttaggttcgttcctacacaagaatttctctataacttat 174  Q
    |||||| |||||||||||||||||||||||| |||||||||||||||||| ||||||||    
T  397221 ttgtttataagaatgatatgttaggttcgtttctacacaagaatttctct-taacttat 397278  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 106; E-Value: 7e-53
Query Start/End: Original strand, 16 - 165
Target Start/End: Complemental strand, 14193471 - 14193323
Alignment:
Q  16 aaataatggttgagagagaggaagagcagttatttttcatttcttaaattatttcctaattattttaaaataaaacaatgacgtgtcatattttaatttg 115  Q
    |||||||||||||||||||||| || || ||||||||||||||||||||||||||| |||||||||||||||||||||||| ||||||| ||||||||||    
T  14193471 aaataatggttgagagagaggaggaacaattatttttcatttcttaaattatttccaaattattttaaaataaaacaatgatgtgtcatgttttaatttg 14193372  T
Q  116 ttgtttgtaagaatgatatgttaggttcgttcctacacaagaatttctct 165  Q
    |||||||||| ||| |||||||||||||||||||| |||| |||||||||    
T  14193371 ttgtttgtaaaaataatatgttaggttcgttccta-acaaaaatttctct 14193323  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 69; E-Value: 8e-31
Query Start/End: Original strand, 72 - 164
Target Start/End: Original strand, 37994880 - 37994972
Alignment:
Q  72 taattattttaaaataaaacaatgacgtgtcatattttaatttgttgtttgtaagaatgatatgttaggttcgttcctacacaagaatttctc 164  Q
    |||||||||||||| ||||||| |||||||||| ||||||||| ||||||||||| |||||| ||||||||||||||||||||||||||||||    
T  37994880 taattattttaaaagaaaacaacgacgtgtcatgttttaatttattgtttgtaaggatgataggttaggttcgttcctacacaagaatttctc 37994972  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 87 - 164
Target Start/End: Original strand, 14193512 - 14193588
Alignment:
Q  87 aaaacaatgacgtgtcatattttaatttgttgtttgtaagaatgatatgttaggttcgttcctacacaagaatttctc 164  Q
    |||| ||||||||||||| |||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||    
T  14193512 aaaaaaatgacgtgtcatgttttaatttgttgtttgtaagaatgata-gttaggttcgttcctacacaagaatttctc 14193588  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 59; E-Value: 7e-25
Query Start/End: Original strand, 95 - 165
Target Start/End: Original strand, 41539966 - 41540035
Alignment:
Q  95 gacgtgtcatattttaatttgttgtttgtaagaatgatatgttaggttcgttcctacacaagaatttctct 165  Q
    |||||||||| |||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||    
T  41539966 gacgtgtcatgttttaatttgttgtttgtaagaatgata-gttaggttcgttcctacacaagaatttctct 41540035  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 95 - 165
Target Start/End: Complemental strand, 2814311 - 2814242
Alignment:
Q  95 gacgtgtcatattttaatttgttgtttgtaagaatgatatgttaggttcgttcctacacaagaatttctct 165  Q
    ||||||||||  ||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||    
T  2814311 gacgtgtcatgatttaatttgttgtttgtaagaatgata-gttaggttcgttcctacacaagaatttctct 2814242  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 87 - 164
Target Start/End: Complemental strand, 37994785 - 37994708
Alignment:
Q  87 aaaacaatgacgtgtcatattttaatttgttgtttgtaagaatgatatgttaggttcgttcctacacaagaatttctc 164  Q
    ||||||| ||||| |||| ||||||||| ||||||||||| |||||| ||||||||||||||||||||||||||||||    
T  37994785 aaaacaacgacgtatcatgttttaatttattgtttgtaaggatgataggttaggttcgttcctacacaagaatttctc 37994708  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 87 - 165
Target Start/End: Complemental strand, 44036891 - 44036813
Alignment:
Q  87 aaaacaatgacgtgtcatattttaatttgttgtttgtaagaatgatatgttaggttcgttcctacacaagaatttctct 165  Q
    ||||||| |||||||||| ||| ||||||||||||||||| |||||| ||||||||||| |||||||| ||||||||||    
T  44036891 aaaacaacgacgtgtcatgtttgaatttgttgtttgtaaggatgataggttaggttcgtccctacacatgaatttctct 44036813  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 348 - 417
Target Start/End: Complemental strand, 3670184 - 3670115
Alignment:
Q  348 caagcaagagagagacgccacacttacccaaaaccttaaggaaataggtttatgggtcctcttacttata 417  Q
    ||||||||||||| ||  ||| ||||||||||||||||||||||||||||||||||||||| ||||||||    
T  3670184 caagcaagagagacaccacactcttacccaaaaccttaaggaaataggtttatgggtcctcatacttata 3670115  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 72 - 148
Target Start/End: Complemental strand, 25101822 - 25101746
Alignment:
Q  72 taattattttaaaataaaacaatgacgtgtcatattttaatttgttgtttgtaagaatgatatgttaggttcgttcc 148  Q
    |||||||||||||| |||||||  | ||||||||||||| ||||||||||| |||||||||| ||||||||||||||    
T  25101822 taattattttaaaagaaaacaacaatgtgtcatattttattttgttgtttgcaagaatgataggttaggttcgttcc 25101746  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 358 - 428
Target Start/End: Complemental strand, 9507898 - 9507826
Alignment:
Q  358 agagacgccacact--tacccaaaaccttaaggaaataggtttatgggtcctcttacttatagggtattcaac 428  Q
    ||||||||||||||  ||||||||||||||||| ||| |||||||| ||||||||||||||| ||||||||||    
T  9507898 agagacgccacactcttacccaaaaccttaaggtaatgggtttatgagtcctcttacttataaggtattcaac 9507826  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 96 - 164
Target Start/End: Complemental strand, 397074 - 397007
Alignment:
Q  96 acgtgtcatattttaatttgttgtttgtaagaatgatatgttaggttcgttcctacacaagaatttctc 164  Q
    |||||| || ||||||||| |||||||||||||||||| ||||||||||||||| ||||||||||||||    
T  397074 acgtgttatgttttaatttattgtttgtaagaatgata-gttaggttcgttcctgcacaagaatttctc 397007  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 356 - 428
Target Start/End: Complemental strand, 147569 - 147495
Alignment:
Q  356 agagagacgccacact--tacccaaaaccttaaggaaataggtttatgggtcctcttacttatagggtattcaac 428  Q
    ||||||||||||||||  |||||||||| |||||| |||||||||||||||||||||| ||||| ||| ||||||    
T  147569 agagagacgccacactcttacccaaaactttaaggcaataggtttatgggtcctcttatttataaggtgttcaac 147495  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 348 - 417
Target Start/End: Complemental strand, 30441209 - 30441140
Alignment:
Q  348 caagcaagagagagacgccacacttacccaaaaccttaaggaaataggtttatgggtcctcttacttata 417  Q
    ||||||||||||| ||  ||| ||||||||||||||||||| ||| |||||||||| |||||||||||||    
T  30441209 caagcaagagagacaccacactcttacccaaaaccttaaggcaatgggtttatgggccctcttacttata 30441140  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 348 - 428
Target Start/End: Complemental strand, 3669811 - 3669731
Alignment:
Q  348 caagcaagagagagacgccacacttacccaaaaccttaaggaaataggtttatgggtcctcttacttatagggtattcaac 428  Q
    ||||||||||||| ||  ||| ||||||||||||||||||| |||  ||||||| ||||||||||||||| ||| ||||||    
T  3669811 caagcaagagagacaccacactcttacccaaaaccttaaggcaatgagtttatgagtcctcttacttataaggtgttcaac 3669731  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 370 - 417
Target Start/End: Original strand, 8918820 - 8918867
Alignment:
Q  370 cttacccaaaaccttaaggaaataggtttatgggtcctcttacttata 417  Q
    ||||||||||||||||||  ||||||||||||||||||||||||||||    
T  8918820 cttacccaaaaccttaagtcaataggtttatgggtcctcttacttata 8918867  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 356 - 428
Target Start/End: Complemental strand, 9608863 - 9608789
Alignment:
Q  356 agagagacgccacact--tacccaaaaccttaaggaaataggtttatgggtcctcttacttatagggtattcaac 428  Q
    ||||||||||||||||  |||||||||||||||||  || |||||||||||| ||||||||||| ||| ||||||    
T  9608863 agagagacgccacactcatacccaaaaccttaaggtgatgggtttatgggtcatcttacttataaggtgttcaac 9608789  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 356 - 428
Target Start/End: Complemental strand, 45122742 - 45122668
Alignment:
Q  356 agagagacgccacact--tacccaaaaccttaaggaaataggtttatgggtcctcttacttatagggtattcaac 428  Q
    ||||||||||||||||  ||||||||||||||||  |||  ||||||||||||||||||||||| ||| ||||||    
T  45122742 agagagacgccacactcatacccaaaaccttaagacaatgagtttatgggtcctcttacttataaggtgttcaac 45122668  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 370 - 428
Target Start/End: Original strand, 9483243 - 9483301
Alignment:
Q  370 cttacccaaaaccttaaggaaataggtttatgggtcctcttacttatagggtattcaac 428  Q
    ||||||||||||||||||  ||| |||||||||||||||||||||||| ||| ||||||    
T  9483243 cttacccaaaaccttaagacaatgggtttatgggtcctcttacttataaggtgttcaac 9483301  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 348 - 417
Target Start/End: Original strand, 3038324 - 3038393
Alignment:
Q  348 caagcaagagagagacgccacacttacccaaaaccttaaggaaataggtttatgggtcctcttacttata 417  Q
    |||||||||||||  |  ||| ||||||||||||||||||| ||| |||||||||||||| |||||||||    
T  3038324 caagcaagagagatgccacactcttacccaaaaccttaaggcaatgggtttatgggtccttttacttata 3038393  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 370 - 415
Target Start/End: Complemental strand, 45123106 - 45123061
Alignment:
Q  370 cttacccaaaaccttaaggaaataggtttatgggtcctcttactta 415  Q
    |||||||||||||||||| ||||||||||||||||| |||||||||    
T  45123106 cttacccaaaaccttaagaaaataggtttatgggtcatcttactta 45123061  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 348 - 428
Target Start/End: Complemental strand, 30359395 - 30359315
Alignment:
Q  348 caagcaagagagagacgccacacttacccaaaaccttaaggaaataggtttatgggtcctcttacttatagggtattcaac 428  Q
    |||| |||||||| ||  ||| |||||||||||||||||||  || ||||||||||||||||| |||||| ||| ||||||    
T  30359395 caagaaagagagacaccacactcttacccaaaaccttaaggctatgggtttatgggtcctcttgcttataaggtgttcaac 30359315  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 348 - 428
Target Start/End: Complemental strand, 34835333 - 34835253
Alignment:
Q  348 caagcaagagagagacgccacacttacccaaaaccttaaggaaataggtttatgggtcctcttacttatagggtattcaac 428  Q
    |||||||||| || ||  ||| |||||||||||| |||||| |||  ||||||||||||||||||||||| ||| ||||||    
T  34835333 caagcaagagtgacaccacactcttacccaaaactttaaggcaatgagtttatgggtcctcttacttataaggtgttcaac 34835253  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 348 - 428
Target Start/End: Original strand, 40579540 - 40579620
Alignment:
Q  348 caagcaagagagagacgccacacttacccaaaaccttaaggaaataggtttatgggtcctcttacttatagggtattcaac 428  Q
    ||||||| ||||| ||  ||| |||||| |||||||||| | |||| ||||||||||||||||||||||| ||| ||||||    
T  40579540 caagcaatagagacaccacactcttacctaaaaccttaaagcaataagtttatgggtcctcttacttataaggtgttcaac 40579620  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 348 - 428
Target Start/End: Original strand, 45122091 - 45122171
Alignment:
Q  348 caagcaagagagagacgccacacttacccaaaaccttaaggaaataggtttatgggtcctcttacttatagggtattcaac 428  Q
    |||| |||||||| ||  ||| |||||||||||||||||| ||||  |||||||||| |||||||||||| ||| ||||||    
T  45122091 caagtaagagagacaccacactcttacccaaaaccttaagaaaatgagtttatgggttctcttacttataaggtgttcaac 45122171  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 348 - 411
Target Start/End: Complemental strand, 5915991 - 5915928
Alignment:
Q  348 caagcaagagagagacgccacacttacccaaaaccttaaggaaataggtttatgggtcctctta 411  Q
    ||||||||||||| ||  ||| ||||||||||||||||||| |||  |||||||||||||||||    
T  5915991 caagcaagagagacaccacactcttacccaaaaccttaaggcaatgagtttatgggtcctctta 5915928  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 350 - 417
Target Start/End: Original strand, 33113403 - 33113470
Alignment:
Q  350 agcaagagagagacgccacacttacccaaaaccttaaggaaataggtttatgggtcctcttacttata 417  Q
    ||||||||||| ||  ||| ||||||||||| ||||||| |||  |||||||||||||||||||||||    
T  33113403 agcaagagagacaccacactcttacccaaaatcttaaggcaatgagtttatgggtcctcttacttata 33113470  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 356 - 428
Target Start/End: Complemental strand, 40518189 - 40518115
Alignment:
Q  356 agagagacgccacact--tacccaaaaccttaaggaaataggtttatgggtcctcttacttatagggtattcaac 428  Q
    ||||||||||||||||  ||||||||||||||||| | | |||||||||||||  ||||||||| ||| ||||||    
T  40518189 agagagacgccacactcttacccaaaaccttaaggcattgggtttatgggtccatttacttataaggtgttcaac 40518115  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 370 - 417
Target Start/End: Original strand, 43274835 - 43274882
Alignment:
Q  370 cttacccaaaaccttaaggaaataggtttatgggtcctcttacttata 417  Q
    ||||| ||||||||||||  ||||||||||||||||||||||||||||    
T  43274835 cttactcaaaaccttaagacaataggtttatgggtcctcttacttata 43274882  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 371 - 428
Target Start/End: Original strand, 1513972 - 1514029
Alignment:
Q  371 ttacccaaaaccttaaggaaataggtttatgggtcctcttacttatagggtattcaac 428  Q
    ||||||||||||||||||  || |||||| ||||||||||||||||| ||| ||||||    
T  1513972 ttacccaaaaccttaaggttatgggtttaagggtcctcttacttataaggtgttcaac 1514029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 348 - 417
Target Start/End: Original strand, 20870607 - 20870676
Alignment:
Q  348 caagcaagagagagacgccacacttacccaaaaccttaaggaaataggtttatgggtcctcttacttata 417  Q
    ||||||||||||| ||  ||| |||| |||||| ||||||| | | ||||||||||||||||||||||||    
T  20870607 caagcaagagagacaccacactcttatccaaaatcttaaggcagtgggtttatgggtcctcttacttata 20870676  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 348 - 417
Target Start/End: Complemental strand, 34835000 - 34834931
Alignment:
Q  348 caagcaagagagagacgccacacttacccaaaaccttaaggaaataggtttatgggtcctcttacttata 417  Q
    ||||||||||||| ||  ||| ||||||||||||||||||| |||  ||||||| ||| |||||||||||    
T  34835000 caagcaagagagacaccacactcttacccaaaaccttaaggcaatgagtttatgagtcatcttacttata 34834931  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 348 - 417
Target Start/End: Complemental strand, 34835599 - 34835530
Alignment:
Q  348 caagcaagagagagacgccacacttacccaaaaccttaaggaaataggtttatgggtcctcttacttata 417  Q
    |||||||||| || ||  ||| |||||||||||| |||||| |||  |||||||||||||||||||||||    
T  34835599 caagcaagagtgacaccacactcttacccaaaactttaaggcaatgagtttatgggtcctcttacttata 34835530  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 348 - 417
Target Start/End: Complemental strand, 34835865 - 34835796
Alignment:
Q  348 caagcaagagagagacgccacacttacccaaaaccttaaggaaataggtttatgggtcctcttacttata 417  Q
    |||||||||| || ||  ||| |||||||||||| |||||| |||  |||||||||||||||||||||||    
T  34835865 caagcaagagtgacaccacactcttacccaaaactttaaggcaatgagtttatgggtcctcttacttata 34835796  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 348 - 404
Target Start/End: Complemental strand, 147944 - 147888
Alignment:
Q  348 caagcaagagagagacgccacacttacccaaaaccttaaggaaataggtttatgggt 404  Q
    |||| |||||||| ||  ||| ||||||||||||||||||| |||||||||||||||    
T  147944 caagtaagagagacaccacactcttacccaaaaccttaaggcaataggtttatgggt 147888  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 348 - 428
Target Start/End: Original strand, 9482638 - 9482718
Alignment:
Q  348 caagcaagagagagacgccacacttacccaaaaccttaaggaaataggtttatgggtcctcttacttatagggtattcaac 428  Q
    ||||||||||||| ||  ||| ||||  ||||| ||| ||| ||| |||||||||||||||||||||||| ||| ||||||    
T  9482638 caagcaagagagataccacactcttatacaaaatctttaggcaatgggtttatgggtcctcttacttataaggtgttcaac 9482718  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 370 - 417
Target Start/End: Original strand, 70330 - 70377
Alignment:
Q  370 cttacccaaaaccttaaggaaataggtttatgggtcctcttacttata 417  Q
    |||||| |||||||||||| | | ||||||||||||||||||||||||    
T  70330 cttacctaaaaccttaaggcagtgggtttatgggtcctcttacttata 70377  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 374 - 417
Target Start/End: Complemental strand, 9309077 - 9309034
Alignment:
Q  374 cccaaaaccttaaggaaataggtttatgggtcctcttacttata 417  Q
    ||||||||||| ||| ||| ||||||||||||||||||||||||    
T  9309077 cccaaaacctttaggcaatgggtttatgggtcctcttacttata 9309034  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 356 - 428
Target Start/End: Complemental strand, 30359727 - 30359653
Alignment:
Q  356 agagagacgccacact--tacccaaaaccttaaggaaataggtttatgggtcctcttacttatagggtattcaac 428  Q
    |||||||| |||||||  ||||||||| |||||||  || |||||||| ||||||||||||||| ||| ||||||    
T  30359727 agagagacaccacactcttacccaaaatcttaaggttatgggtttatgagtcctcttacttataaggtgttcaac 30359653  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #42
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 349 - 412
Target Start/End: Original strand, 32640567 - 32640630
Alignment:
Q  349 aagcaagagagagacgccacacttacccaaaaccttaaggaaataggtttatgggtcctcttac 412  Q
    ||||||||||||  |  ||| ||||||||||||||||||| ||| ||||||| |||||||||||    
T  32640567 aagcaagagagacgcaacactcttacccaaaaccttaaggcaatgggtttatcggtcctcttac 32640630  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #43
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 101 - 164
Target Start/End: Original strand, 40587991 - 40588054
Alignment:
Q  101 tcatattttaatttgttgtttgtaagaatgatatgttaggttcgttcctacacaagaatttctc 164  Q
    |||| |||||||||||| ||| ||| |||||||| |||  ||||||||||||| ||||||||||    
T  40587991 tcatgttttaatttgttatttataaaaatgatatattaaattcgttcctacaccagaatttctc 40588054  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #44
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 370 - 428
Target Start/End: Original strand, 1013927 - 1013985
Alignment:
Q  370 cttacccaaaaccttaaggaaataggtttatgggtcctcttacttatagggtattcaac 428  Q
    ||||| ||||||  ||||| ||| ||||||| |||||||||||||||||||| ||||||    
T  1013927 cttactcaaaactctaaggcaatgggtttattggtcctcttacttatagggtgttcaac 1013985  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #45
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 370 - 428
Target Start/End: Original strand, 18372050 - 18372108
Alignment:
Q  370 cttacccaaaaccttaaggaaataggtttatgggtcctcttacttatagggtattcaac 428  Q
    ||||||||||||||||| | |||  |||||||| |||||||||||||| ||| ||||||    
T  18372050 cttacccaaaaccttaaagcaatgagtttatggatcctcttacttataaggtgttcaac 18372108  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #46
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 374 - 428
Target Start/End: Original strand, 25561876 - 25561930
Alignment:
Q  374 cccaaaaccttaaggaaataggtttatgggtcctcttacttatagggtattcaac 428  Q
    ||||||||||||||  |||  ||||||||||||||||||||||| ||| ||||||    
T  25561876 cccaaaaccttaagacaatgagtttatgggtcctcttacttataaggtgttcaac 25561930  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #47
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 370 - 428
Target Start/End: Complemental strand, 40518684 - 40518626
Alignment:
Q  370 cttacccaaaaccttaaggaaataggtttatgggtcctcttacttatagggtattcaac 428  Q
    ||||||||||||||||||  | | |||||||||||||||||| ||||| ||| ||||||    
T  40518684 cttacccaaaaccttaagtcattgggtttatgggtcctcttatttataaggtgttcaac 40518626  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #48
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 358 - 417
Target Start/End: Original strand, 45121952 - 45122013
Alignment:
Q  358 agagacgccacact--tacccaaaaccttaaggaaataggtttatgggtcctcttacttata 417  Q
    ||||||||||||||  ||||||||| ||||||| |||  ||||||| |||||||||||||||    
T  45121952 agagacgccacactgttacccaaaatcttaaggcaatgagtttatgagtcctcttacttata 45122013  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #49
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 348 - 428
Target Start/End: Original strand, 1014279 - 1014359
Alignment:
Q  348 caagcaagagagagacgccacacttacccaaaaccttaaggaaataggtttatgggtcctcttacttatagggtattcaac 428  Q
    |||||| |||||| ||  ||| |||||||||||| |||||| ||   ||||| ||||||||||||||||| ||| ||||||    
T  1014279 caagcaggagagacaccacactcttacccaaaactttaaggtaacgagtttacgggtcctcttacttataaggtgttcaac 1014359  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #50
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 377 - 417
Target Start/End: Complemental strand, 5420746 - 5420706
Alignment:
Q  377 aaaaccttaaggaaataggtttatgggtcctcttacttata 417  Q
    |||||||||||| ||| |||||||| |||||||||||||||    
T  5420746 aaaaccttaaggcaatgggtttatgagtcctcttacttata 5420706  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #51
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 326 - 411
Target Start/End: Complemental strand, 6651636 - 6651555
Alignment:
Q  326 gaggttagaacaatcacacaagcaagcaagagagagacgccacacttacccaaaaccttaaggaaataggtttatgggtcctctta 411  Q
    ||||||||||||||| ||||||||||    ||||| ||  ||| ||||||||||||||||||| |||   ||||||||| ||||||    
T  6651636 gaggttagaacaatcgcacaagcaag----agagacaccacactcttacccaaaaccttaaggcaatgaatttatgggttctctta 6651555  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #52
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 373 - 417
Target Start/End: Complemental strand, 8794210 - 8794166
Alignment:
Q  373 acccaaaaccttaaggaaataggtttatgggtcctcttacttata 417  Q
    |||||||||||||||  | |||||||||| |||||||||||||||    
T  8794210 acccaaaaccttaagatattaggtttatgagtcctcttacttata 8794166  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #53
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 355 - 428
Target Start/End: Complemental strand, 9309474 - 9309399
Alignment:
Q  355 gagagagacgccacact--tacccaaaaccttaaggaaataggtttatgggtcctcttacttatagggtattcaac 428  Q
    ||||||||| |||||||  ||||| | ||||||||| |||  ||||| ||||||||||||||||| ||| ||||||    
T  9309474 gagagagacaccacactcttacccgacaccttaaggcaatgagtttaagggtcctcttacttataaggtgttcaac 9309399  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #54
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 356 - 417
Target Start/End: Complemental strand, 9609203 - 9609140
Alignment:
Q  356 agagagacgccacact--tacccaaaaccttaaggaaataggtttatgggtcctcttacttata 417  Q
    ||||||||||||||||  |||| ||||| ||||||  || |||||||||||| |||||||||||    
T  9609203 agagagacgccacactcttaccgaaaacattaaggcgatgggtttatgggtcatcttacttata 9609140  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 129; Significance: 1e-66; HSPs: 47)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 129; E-Value: 1e-66
Query Start/End: Original strand, 16 - 164
Target Start/End: Complemental strand, 7298783 - 7298635
Alignment:
Q  16 aaataatggttgagagagaggaagagcagttatttttcatttcttaaattatttcctaattattttaaaataaaacaatgacgtgtcatattttaatttg 115  Q
    ||||||||||||||| |||||| ||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||| ||||||||||    
T  7298783 aaataatggttgagaaagaggaggagcagttatttttcatttcttaaattattttctaattattttaaaataaaacaatgacgtgtcatgttttaatttg 7298684  T
Q  116 ttgtttgtaagaatgatatgttaggttcgttcctacacaagaatttctc 164  Q
    |||||||||| ||||||||||||||||||||||||||||||||||||||    
T  7298683 ttgtttgtaaaaatgatatgttaggttcgttcctacacaagaatttctc 7298635  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 125; E-Value: 3e-64
Query Start/End: Original strand, 16 - 164
Target Start/End: Original strand, 40521133 - 40521280
Alignment:
Q  16 aaataatggttgagagagaggaagagcagttatttttcatttcttaaattatttcctaattattttaaaataaaacaatgacgtgtcatattttaatttg 115  Q
    |||||||||||||||||||||| ||||||||||||| ||||| |||||||||||||||||||||||||||||||||||||| ||||||| ||||||||||    
T  40521133 aaataatggttgagagagaggaggagcagttatttt-catttattaaattatttcctaattattttaaaataaaacaatgatgtgtcatgttttaatttg 40521231  T
Q  116 ttgtttgtaagaatgatatgttaggttcgttcctacacaagaatttctc 164  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||    
T  40521232 ttgtttgtaagaatgatatgttaggttcgttcctacacaagaatttctc 40521280  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 101; E-Value: 6e-50
Query Start/End: Original strand, 18 - 138
Target Start/End: Original strand, 46568076 - 46568196
Alignment:
Q  18 ataatggttgagagagaggaagagcagttatttttcatttcttaaattatttcctaattattttaaaataaaacaatgacgtgtcatattttaatttgtt 117  Q
    |||||||||||||||||||| ||||||||||||||||||| ||||||||||||||||||||||| |||||||||||||| ||||||| ||||||||||||    
T  46568076 ataatggttgagagagaggaggagcagttatttttcatttattaaattatttcctaattatttttaaataaaacaatgatgtgtcatgttttaatttgtt 46568175  T
Q  118 gtttgtaagaatgatatgtta 138  Q
    |||||||||||||||||||||    
T  46568176 gtttgtaagaatgatatgtta 46568196  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 93 - 165
Target Start/End: Complemental strand, 40521086 - 40521015
Alignment:
Q  93 atgacgtgtcatattttaatttgttgtttgtaagaatgatatgttaggttcgttcctacacaagaatttctct 165  Q
    ||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||    
T  40521086 atgacgtgtcatattttaatttgttgtttgtaagaatgata-gttaggttcgttcctacacaagaatttctct 40521015  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 18 - 88
Target Start/End: Complemental strand, 16979562 - 16979492
Alignment:
Q  18 ataatggttgagagagaggaagagcagttatttttcatttcttaaattatttcctaattattttaaaataa 88  Q
    |||||||||||||||||||| ||||||||||||||||||||||||||||||||| ||||||||||||||||    
T  16979562 ataatggttgagagagaggaggagcagttatttttcatttcttaaattatttccaaattattttaaaataa 16979492  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 72 - 165
Target Start/End: Original strand, 19805586 - 19805679
Alignment:
Q  72 taattattttaaaataaaacaatgacgtgtcatattttaatttgttgtttgtaagaatgatatgttaggttcgttcctacacaagaatttctct 165  Q
    |||||||||||||| ||| ||| |||||||||| |||||||||||| ||| |||| |||||| |||| ||||||||||||||||||||||||||    
T  19805586 taattattttaaaagaaagcaacgacgtgtcatgttttaatttgttatttataaggatgataggttaagttcgttcctacacaagaatttctct 19805679  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 96 - 165
Target Start/End: Original strand, 7298833 - 7298901
Alignment:
Q  96 acgtgtcatattttaatttgttgtttgtaagaatgatatgttaggttcgttcctacacaagaatttctct 165  Q
    |||||| || |||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||    
T  7298833 acgtgttatgttttaatttgttgtttgtaagaatgata-gttaggttcgttcctacacaagaatttctct 7298901  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 87 - 164
Target Start/End: Original strand, 16979605 - 16979681
Alignment:
Q  87 aaaacaatgacgtgtcatattttaatttgttgtttgtaagaatgatatgttaggttcgttcctacacaagaatttctc 164  Q
    |||| ||||||||||||| |||||||||||| ||||||||||||||| ||||| ||||||||||||||||||||||||    
T  16979605 aaaaaaatgacgtgtcatgttttaatttgttatttgtaagaatgata-gttagattcgttcctacacaagaatttctc 16979681  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 87 - 164
Target Start/End: Original strand, 28948993 - 28949069
Alignment:
Q  87 aaaacaatgacgtgtcatattttaatttgttgtttgtaagaatgatatgttaggttcgttcctacacaagaatttctc 164  Q
    |||| ||||||||||||| ||||||||| |||||||||||||||||| ||||||||||||||||||||| ||||||||    
T  28948993 aaaaaaatgacgtgtcatgttttaatttattgtttgtaagaatgata-gttaggttcgttcctacacaaaaatttctc 28949069  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 92 - 161
Target Start/End: Complemental strand, 46568028 - 46567960
Alignment:
Q  92 aatgacgtgtcatattttaatttgttgtttgtaagaatgatatgttaggttcgttcctacacaagaattt 161  Q
    ||||||||||||| |||||||||||||||||||||||||||| |||| ||||||||||||||||||||||    
T  46568028 aatgacgtgtcatgttttaatttgttgtttgtaagaatgata-gttaagttcgttcctacacaagaattt 46567960  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 351 - 428
Target Start/End: Original strand, 23414 - 23491
Alignment:
Q  351 gcaagagagagacgccacacttacccaaaaccttaaggaaataggtttatgggtcctcttacttatagggtattcaac 428  Q
    |||||||||| ||  ||| ||||||||||||||||||| |||||||||||||||||||||||||||| ||| ||||||    
T  23414 gcaagagagacaccacactcttacccaaaaccttaaggcaataggtttatgggtcctcttacttataaggtgttcaac 23491  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 16 - 71
Target Start/End: Original strand, 47478473 - 47478528
Alignment:
Q  16 aaataatggttgagagagaggaagagcagttatttttcatttcttaaattatttcc 71  Q
    |||||||||||||||||||||| ||||| |||||||||||||||||||||||||||    
T  47478473 aaataatggttgagagagaggaggagcaattatttttcatttcttaaattatttcc 47478528  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 87 - 164
Target Start/End: Complemental strand, 19804874 - 19804797
Alignment:
Q  87 aaaacaatgacgtgtcatattttaatttgttgtttgtaagaatgatatgttaggttcgttcctacacaagaatttctc 164  Q
    ||||||| || ||||| | ||| ||||||||||||||||| || ||| ||||||||||||||||||||||||||||||    
T  19804874 aaaacaacgatgtgtcgtgtttcaatttgttgtttgtaaggataataggttaggttcgttcctacacaagaatttctc 19804797  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 356 - 417
Target Start/End: Original strand, 1085656 - 1085719
Alignment:
Q  356 agagagacgccacact--tacccaaaaccttaaggaaataggtttatgggtcctcttacttata 417  Q
    ||||||||||||||||  ||||||||||||||||| ||| ||||||||||||||||||||||||    
T  1085656 agagagacgccacactcttacccaaaaccttaaggcaatgggtttatgggtcctcttacttata 1085719  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 352 - 428
Target Start/End: Complemental strand, 16569316 - 16569240
Alignment:
Q  352 caagagagagacgccacacttacccaaaaccttaaggaaataggtttatgggtcctcttacttatagggtattcaac 428  Q
    ||||||||| ||  ||| |||||| |||||||||||| ||| |||||||||||||||||||||||| ||||||||||    
T  16569316 caagagagacaccgcactcttaccaaaaaccttaaggcaatgggtttatgggtcctcttacttataaggtattcaac 16569240  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 352 - 428
Target Start/End: Original strand, 16596346 - 16596422
Alignment:
Q  352 caagagagagacgccacacttacccaaaaccttaaggaaataggtttatgggtcctcttacttatagggtattcaac 428  Q
    ||||||||| ||  ||| |||||| |||||||||||| ||| |||||||||||||||||||||||| ||||||||||    
T  16596346 caagagagacaccgcactcttaccaaaaaccttaaggcaatgggtttatgggtcctcttacttataaggtattcaac 16596422  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 16 - 73
Target Start/End: Complemental strand, 28948950 - 28948891
Alignment:
Q  16 aaataatggtt--gagagagaggaagagcagttatttttcatttcttaaattatttccta 73  Q
    |||||||||||  ||||||||||| |||||||||||||||||||||||||||||||||||    
T  28948950 aaataatggttcagagagagaggaggagcagttatttttcatttcttaaattatttccta 28948891  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 370 - 428
Target Start/End: Complemental strand, 7517682 - 7517624
Alignment:
Q  370 cttacccaaaaccttaaggaaataggtttatgggtcctcttacttatagggtattcaac 428  Q
    ||||||||||||||||||| ||| |||||||||||||||||||||||| ||| ||||||    
T  7517682 cttacccaaaaccttaaggcaatgggtttatgggtcctcttacttataaggtgttcaac 7517624  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 370 - 428
Target Start/End: Original strand, 22566718 - 22566776
Alignment:
Q  370 cttacccaaaaccttaaggaaataggtttatgggtcctcttacttatagggtattcaac 428  Q
    ||||||||||||||||||| ||| |||||||||||||||||||||||| ||| ||||||    
T  22566718 cttacccaaaaccttaaggcaatgggtttatgggtcctcttacttataaggtgttcaac 22566776  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 356 - 428
Target Start/End: Original strand, 37533051 - 37533124
Alignment:
Q  356 agagagacgccacactt-acccaaaaccttaaggaaataggtttatgggtcctcttacttatagggtattcaac 428  Q
    |||||||| |||||||| |||||||||||||||| |||  ||||||||||||||||||||||| ||| ||||||    
T  37533051 agagagacaccacactttacccaaaaccttaaggcaatgagtttatgggtcctcttacttataaggtgttcaac 37533124  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 348 - 428
Target Start/End: Complemental strand, 11845315 - 11845235
Alignment:
Q  348 caagcaagagagagacgccacacttacccaaaaccttaaggaaataggtttatgggtcctcttacttatagggtattcaac 428  Q
    ||||||||||||| ||  ||| |||| |||||||||||||| ||| | |||||||||||||||||||||| ||| ||||||    
T  11845315 caagcaagagagacaccacactcttatccaaaaccttaaggcaatggatttatgggtcctcttacttataaggtgttcaac 11845235  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 348 - 428
Target Start/End: Original strand, 22567073 - 22567153
Alignment:
Q  348 caagcaagagagagacgccacacttacccaaaaccttaaggaaataggtttatgggtcctcttacttatagggtattcaac 428  Q
    ||||||||||||| ||  ||| |||||| |||||||||||| |||  ||||||||||||||||||||||| ||| ||||||    
T  22567073 caagcaagagagacaccacactcttaccaaaaaccttaaggcaatgagtttatgggtcctcttacttataaggtgttcaac 22567153  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 355 - 428
Target Start/End: Complemental strand, 30244389 - 30244314
Alignment:
Q  355 gagagagacgccacact--tacccaaaaccttaaggaaataggtttatgggtcctcttacttatagggtattcaac 428  Q
    ||||||||| |||||||  ||||||||||||||||| ||| |||||||| ||||||||||||||| ||| ||||||    
T  30244389 gagagagacaccacactcttacccaaaaccttaaggcaatgggtttatgagtcctcttacttataaggtcttcaac 30244314  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 348 - 428
Target Start/End: Original strand, 37533398 - 37533478
Alignment:
Q  348 caagcaagagagagacgccacacttacccaaaaccttaaggaaataggtttatgggtcctcttacttatagggtattcaac 428  Q
    ||||||| ||||| ||  ||| ||||||||||||||||||| ||| | |||||||||||||||||||||| ||| ||||||    
T  37533398 caagcaaaagagacaccacactcttacccaaaaccttaaggcaatggatttatgggtcctcttacttataaggtgttcaac 37533478  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 348 - 428
Target Start/End: Complemental strand, 45433365 - 45433285
Alignment:
Q  348 caagcaagagagagacgccacacttacccaaaaccttaaggaaataggtttatgggtcctcttacttatagggtattcaac 428  Q
    ||||||||||||| ||  ||| ||||||||||| ||||||| |||||||||||| || |||||||||||| ||| ||||||    
T  45433365 caagcaagagagacaccacactcttacccaaaatcttaaggcaataggtttatgagttctcttacttataaggtgttcaac 45433285  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 348 - 416
Target Start/End: Original strand, 118333 - 118403
Alignment:
Q  348 caagcaagagagagacgccacact--tacccaaaaccttaaggaaataggtttatgggtcctcttacttat 416  Q
    ||||||||||| ||||||||||||  |||||||||||||| || ||| ||||||||| |||||||||||||    
T  118333 caagcaagagatagacgccacactcttacccaaaaccttacggtaatgggtttatggatcctcttacttat 118403  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 370 - 428
Target Start/End: Complemental strand, 6054662 - 6054604
Alignment:
Q  370 cttacccaaaaccttaaggaaataggtttatgggtcctcttacttatagggtattcaac 428  Q
    ||||||||||||||||||| |||  ||||||||||||||||||||||| ||| ||||||    
T  6054662 cttacccaaaaccttaaggcaatgtgtttatgggtcctcttacttataaggtgttcaac 6054604  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 350 - 428
Target Start/End: Complemental strand, 29157687 - 29157609
Alignment:
Q  350 agcaagagagagacgccacacttacccaaaaccttaaggaaataggtttatgggtcctcttacttatagggtattcaac 428  Q
    ||||||||||| ||  ||| ||||||||||||||||||| ||| | |||||||||| ||||||||||| ||| ||||||    
T  29157687 agcaagagagacaccacactcttacccaaaaccttaaggcaatggatttatgggtcgtcttacttataaggtgttcaac 29157609  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 357 - 428
Target Start/End: Original strand, 36534825 - 36534898
Alignment:
Q  357 gagagacgccacact--tacccaaaaccttaaggaaataggtttatgggtcctcttacttatagggtattcaac 428  Q
    |||||||||||||||  ||||||||||||||||    |||||||||||||||||||||||||| ||| ||||||    
T  36534825 gagagacgccacactcttacccaaaaccttaagactttaggtttatgggtcctcttacttataaggtgttcaac 36534898  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 370 - 428
Target Start/End: Complemental strand, 45434738 - 45434680
Alignment:
Q  370 cttacccaaaaccttaaggaaataggtttatgggtcctcttacttatagggtattcaac 428  Q
    ||||||||||||||||||| | || ||||||||||||||||||||||| ||| ||||||    
T  45434738 cttacccaaaaccttaaggcagtaagtttatgggtcctcttacttataaggtgttcaac 45434680  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 371 - 428
Target Start/End: Original strand, 36939790 - 36939847
Alignment:
Q  371 ttacccaaaaccttaaggaaataggtttatgggtcctcttacttatagggtattcaac 428  Q
    |||||||||||||||||| ||| | |||||||||||||||||||||| ||| ||||||    
T  36939790 ttacccaaaaccttaaggcaatggatttatgggtcctcttacttataaggtgttcaac 36939847  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 355 - 428
Target Start/End: Complemental strand, 7554144 - 7554069
Alignment:
Q  355 gagagagacgccacact--tacccaaaaccttaaggaaataggtttatgggtcctcttacttatagggtattcaac 428  Q
    ||||||||| |||||||  |||||||||||||||||  || ||||||||| |||||||||||||| ||| ||||||    
T  7554144 gagagagacaccacactcttacccaaaaccttaaggctatgggtttatggatcctcttacttataaggtgttcaac 7554069  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 348 - 428
Target Start/End: Complemental strand, 19122855 - 19122775
Alignment:
Q  348 caagcaagagagagacgccacacttacccaaaaccttaaggaaataggtttatgggtcctcttacttatagggtattcaac 428  Q
    ||||||||| ||| ||  ||| ||||||||||||||||||| ||| | |||||| ||||||||||||||| ||| ||||||    
T  19122855 caagcaagatagacaccacactcttacccaaaaccttaaggcaatggatttatgagtcctcttacttataaggtgttcaac 19122775  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 352 - 428
Target Start/End: Complemental strand, 30245197 - 30245121
Alignment:
Q  352 caagagagagacgccacacttacccaaaaccttaaggaaataggtttatgggtcctcttacttatagggtattcaac 428  Q
    ||||||||| ||  ||| ||||||||||||||||||| |||  ||||||||||| ||||||||||| ||| ||||||    
T  30245197 caagagagacaccacactcttacccaaaaccttaaggcaatgagtttatgggtcgtcttacttataaggtgttcaac 30245121  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 352 - 428
Target Start/End: Complemental strand, 30253612 - 30253536
Alignment:
Q  352 caagagagagacgccacacttacccaaaaccttaaggaaataggtttatgggtcctcttacttatagggtattcaac 428  Q
    ||||||||| ||  ||| ||||||||||||||||||| |||  |||||||||| |||||||||||| ||| ||||||    
T  30253612 caagagagacaccacactcttacccaaaaccttaaggcaatgagtttatgggttctcttacttataaggtcttcaac 30253536  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 348 - 428
Target Start/End: Complemental strand, 45754839 - 45754759
Alignment:
Q  348 caagcaagagagagacgccacacttacccaaaaccttaaggaaataggtttatgggtcctcttacttatagggtattcaac 428  Q
    ||||||||||||| ||  ||| |||||||||||||||||||  || |||||||| ||| ||||||||||| ||| ||||||    
T  45754839 caagcaagagagacaccacactcttacccaaaaccttaaggctatgggtttatgagtcatcttacttataaggtgttcaac 45754759  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 370 - 428
Target Start/End: Complemental strand, 30032669 - 30032611
Alignment:
Q  370 cttacccaaaaccttaaggaaataggtttatgggtcctcttacttatagggtattcaac 428  Q
    |||||||||||||||||||  |||||||||||| | |||||||||||| ||| ||||||    
T  30032669 cttacccaaaaccttaaggctataggtttatggatactcttacttataaggtgttcaac 30032611  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 356 - 426
Target Start/End: Complemental strand, 24177553 - 24177481
Alignment:
Q  356 agagagacgccacact--tacccaaaaccttaaggaaataggtttatgggtcctcttacttatagggtattca 426  Q
    ||||||||||||||||  |||| ||||| |||||| ||| ||||||||||||| |||||||||| ||| ||||    
T  24177553 agagagacgccacactcttaccaaaaactttaaggcaatgggtttatgggtccgcttacttataaggtgttca 24177481  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 348 - 417
Target Start/End: Original strand, 40094808 - 40094877
Alignment:
Q  348 caagcaagagagagacgccacacttacccaaaaccttaaggaaataggtttatgggtcctcttacttata 417  Q
    |||||||||||||  |  ||| ||||||||||||||||||   || ||||||||||||||||||||||||    
T  40094808 caagcaagagagacgccacactcttacccaaaaccttaagacgatgggtttatgggtcctcttacttata 40094877  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 355 - 417
Target Start/End: Complemental strand, 47129214 - 47129150
Alignment:
Q  355 gagagagacgccacact--tacccaaaaccttaaggaaataggtttatgggtcctcttacttata 417  Q
    ||||||||| |||||||  ||||||||||||||| |  || ||||||||||||||||||||||||    
T  47129214 gagagagacaccacactcctacccaaaaccttaaagcgatgggtttatgggtcctcttacttata 47129150  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 355 - 428
Target Start/End: Original strand, 34218073 - 34218148
Alignment:
Q  355 gagagagacgccacact--tacccaaaaccttaaggaaataggtttatgggtcctcttacttatagggtattcaac 428  Q
    ||||||||| |||||||  ||||||||||||||||  ||| |||||||| ||||||| ||||||| ||| ||||||    
T  34218073 gagagagacaccacactcttacccaaaaccttaagacaatgggtttatgagtcctctcacttataaggtgttcaac 34218148  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 370 - 416
Target Start/End: Original strand, 1085304 - 1085350
Alignment:
Q  370 cttacccaaaaccttaaggaaataggtttatgggtcctcttacttat 416  Q
    ||||||||||||||||||| |||  |||||||||| |||||||||||    
T  1085304 cttacccaaaaccttaaggcaatgagtttatgggttctcttacttat 1085350  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 370 - 428
Target Start/End: Original strand, 8128497 - 8128555
Alignment:
Q  370 cttacccaaaaccttaaggaaataggtttatgggtcctcttacttatagggtattcaac 428  Q
    |||| ||||||||||||||  || ||||||||||||||||||| |||| ||| ||||||    
T  8128497 cttaaccaaaaccttaaggttatgggtttatgggtcctcttacatataaggtgttcaac 8128555  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 370 - 428
Target Start/End: Complemental strand, 14681612 - 14681554
Alignment:
Q  370 cttacccaaaaccttaaggaaataggtttatgggtcctcttacttatagggtattcaac 428  Q
    ||||||||||||||||||  ||| |||||||||| ||||||||||| | ||| ||||||    
T  14681612 cttacccaaaaccttaagacaatgggtttatgggccctcttacttacaaggtgttcaac 14681554  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 356 - 426
Target Start/End: Original strand, 28300293 - 28300366
Alignment:
Q  356 agagagacgccacact--tacccaaaaccttaaggaaataggtttat-gggtcctcttacttatagggtattca 426  Q
    ||||||||||||||||  ||||||||| ||||||| ||| ||||||| |||| |||||||||||| ||| ||||    
T  28300293 agagagacgccacactcttacccaaaatcttaaggcaatgggtttatggggttctcttacttataaggtgttca 28300366  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 371 - 417
Target Start/End: Original strand, 40230348 - 40230394
Alignment:
Q  371 ttacccaaaaccttaaggaaataggtttatgggtcctcttacttata 417  Q
    |||||||||||||||||   || ||||||||||||||||||||||||    
T  40230348 ttacccaaaaccttaagactatgggtttatgggtcctcttacttata 40230394  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #47
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 109 - 155
Target Start/End: Complemental strand, 47478415 - 47478370
Alignment:
Q  109 taatttgttgtttgtaagaatgatatgttaggttcgttcctacacaa 155  Q
    ||||||||||||||||||||||||| |||| ||||||| ||||||||    
T  47478415 taatttgttgtttgtaagaatgata-gttaagttcgtttctacacaa 47478370  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 129; Significance: 1e-66; HSPs: 37)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 129; E-Value: 1e-66
Query Start/End: Original strand, 16 - 164
Target Start/End: Complemental strand, 21389169 - 21389021
Alignment:
Q  16 aaataatggttgagagagaggaagagcagttatttttcatttcttaaattatttcctaattattttaaaataaaacaatgacgtgtcatattttaatttg 115  Q
    |||||||||||||||||||||| ||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||| ||||||||||    
T  21389169 aaataatggttgagagagaggaggagcatttatttttcatttcttaaattatttcctaattattttaaaataaaacaatgacgtatcatgttttaatttg 21389070  T
Q  116 ttgtttgtaagaatgatatgttaggttcgttcctacacaagaatttctc 164  Q
    ||||||||||||||||||||||||||||||||||||| |||||||||||    
T  21389069 ttgtttgtaagaatgatatgttaggttcgttcctacagaagaatttctc 21389021  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 116; E-Value: 7e-59
Query Start/End: Original strand, 16 - 163
Target Start/End: Original strand, 7789786 - 7789933
Alignment:
Q  16 aaataatggttgagagagaggaagagcagttatttttcatttcttaaattatttcctaattattttaaaataaaacaatgacgtgtcatattttaatttg 115  Q
    |||||||||||||||||||||| ||||| |||||||| ||||||||||||||||||||||||||||  || |||||||||||||||||| ||||||||||    
T  7789786 aaataatggttgagagagaggaggagcaattattttttatttcttaaattatttcctaattattttttaaaaaaacaatgacgtgtcatgttttaatttg 7789885  T
Q  116 ttgtttgtaagaatgatatgttaggttcgttcctacacaagaatttct 163  Q
    |||||||||||||||||||||||||||| |||||||||||||||||||    
T  7789886 ttgtttgtaagaatgatatgttaggttcattcctacacaagaatttct 7789933  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 76; E-Value: 5e-35
Query Start/End: Original strand, 72 - 163
Target Start/End: Original strand, 33022340 - 33022431
Alignment:
Q  72 taattattttaaaataaaacaatgacgtgtcatattttaatttgttgtttgtaagaatgatatgttaggttcgttcctacacaagaatttct 163  Q
    |||||||||||||| ||||||| |||||||||| ||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||    
T  33022340 taattattttaaaagaaaacaacgacgtgtcatgttttaatttgttgtttgtaaggatgatatgttaggttcgttcctacacaagaatttct 33022431  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 87 - 166
Target Start/End: Complemental strand, 33022241 - 33022162
Alignment:
Q  87 aaaacaatgacgtgtcatattttaatttgttgtttgtaagaatgatatgttaggttcgttcctacacaagaatttctcta 166  Q
    ||||||| |||||||||| ||||||||||||||||||||| |||||| ||||||||||||||||||||| ||||||||||    
T  33022241 aaaacaacgacgtgtcatgttttaatttgttgtttgtaaggatgataggttaggttcgttcctacacaataatttctcta 33022162  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 59; E-Value: 7e-25
Query Start/End: Original strand, 87 - 161
Target Start/End: Original strand, 21389209 - 21389282
Alignment:
Q  87 aaaacaatgacgtgtcatattttaatttgttgtttgtaagaatgatatgttaggttcgttcctacacaagaattt 161  Q
    |||| ||||||||||||| |||||||||||||||||||||||||||| |||||||||||||||||||||||||||    
T  21389209 aaaaaaatgacgtgtcatgttttaatttgttgtttgtaagaatgata-gttaggttcgttcctacacaagaattt 21389282  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 82 - 153
Target Start/End: Complemental strand, 7789748 - 7789678
Alignment:
Q  82 aaaataaaacaatgacgtgtcatattttaatttgttgtttgtaagaatgatatgttaggttcgttcctacac 153  Q
    |||| ||||||||||| |||||| |||||||||||||||||||||||||||| |||||||||||||||||||    
T  7789748 aaaaaaaaacaatgacatgtcatgttttaatttgttgtttgtaagaatgata-gttaggttcgttcctacac 7789678  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 348 - 428
Target Start/End: Complemental strand, 29518627 - 29518547
Alignment:
Q  348 caagcaagagagagacgccacacttacccaaaaccttaaggaaataggtttatgggtcctcttacttatagggtattcaac 428  Q
    ||||||||||||| ||  ||| ||||||||||||||||||| ||| |||||||||||||||||||||||| ||| ||||||    
T  29518627 caagcaagagagacaccacactcttacccaaaaccttaaggtaatgggtttatgggtcctcttacttataaggtgttcaac 29518547  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 348 - 428
Target Start/End: Complemental strand, 29519044 - 29518964
Alignment:
Q  348 caagcaagagagagacgccacacttacccaaaaccttaaggaaataggtttatgggtcctcttacttatagggtattcaac 428  Q
    ||||||||||||| ||  ||| ||||||||||||||||||| ||| |||||||||||||||||||||||| ||| ||||||    
T  29519044 caagcaagagagacaccacactcttacccaaaaccttaaggtaatgggtttatgggtcctcttacttataaggtgttcaac 29518964  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 348 - 428
Target Start/End: Complemental strand, 32741303 - 32741223
Alignment:
Q  348 caagcaagagagagacgccacacttacccaaaaccttaaggaaataggtttatgggtcctcttacttatagggtattcaac 428  Q
    ||||||||||||| ||  ||| ||||||||||||||||||| ||| |||||||||||||||||||||||| ||| ||||||    
T  32741303 caagcaagagagacaccacactcttacccaaaaccttaaggtaatgggtttatgggtcctcttacttataaggtgttcaac 32741223  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 356 - 428
Target Start/End: Complemental strand, 16455025 - 16454951
Alignment:
Q  356 agagagacgccacact--tacccaaaaccttaaggaaataggtttatgggtcctcttacttatagggtattcaac 428  Q
    ||||||||||||||||  ||||||||||||||||| |||||||||||||||||| ||||||||| ||| ||||||    
T  16455025 agagagacgccacactcttacccaaaaccttaaggcaataggtttatgggtcctattacttataaggtgttcaac 16454951  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 74 - 163
Target Start/End: Original strand, 28472535 - 28472624
Alignment:
Q  74 attattttaaaataaaacaatgacgtgtcatattttaatttgttgtttgtaagaatgatatgttaggttcgttcctacacaagaatttct 163  Q
    |||||||||||| |||| ||| |||||| ||  ||||||||||||||| ||| |||||||| ||||||||||||||||| || |||||||    
T  28472535 attattttaaaagaaaaaaataacgtgttatgatttaatttgttgtttataaaaatgatatattaggttcgttcctacataaaaatttct 28472624  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 348 - 428
Target Start/End: Complemental strand, 2377878 - 2377798
Alignment:
Q  348 caagcaagagagagacgccacacttacccaaaaccttaaggaaataggtttatgggtcctcttacttatagggtattcaac 428  Q
    ||||||||| ||| ||  ||| ||||||||||||||||||| ||| |||||||||||||||||||||||| ||| ||||||    
T  2377878 caagcaagaaagacaccacactcttacccaaaaccttaaggcaatgggtttatgggtcctcttacttataaggtgttcaac 2377798  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 348 - 428
Target Start/End: Complemental strand, 3409383 - 3409303
Alignment:
Q  348 caagcaagagagagacgccacacttacccaaaaccttaaggaaataggtttatgggtcctcttacttatagggtattcaac 428  Q
    ||||||||||||| ||  ||| ||||||||||||||||||| |||  ||||||||||||||||||||||| ||| ||||||    
T  3409383 caagcaagagagacaccacactcttacccaaaaccttaaggcaatgagtttatgggtcctcttacttataaggtgttcaac 3409303  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 348 - 428
Target Start/End: Complemental strand, 3415582 - 3415502
Alignment:
Q  348 caagcaagagagagacgccacacttacccaaaaccttaaggaaataggtttatgggtcctcttacttatagggtattcaac 428  Q
    ||||||||||||| ||  ||| |||||| |||||||||||| ||| |||||||||||||||||||||||| ||| ||||||    
T  3415582 caagcaagagagacaccacactcttaccaaaaaccttaaggcaatgggtttatgggtcctcttacttatatggtgttcaac 3415502  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 355 - 428
Target Start/End: Original strand, 10074030 - 10074105
Alignment:
Q  355 gagagagacgccacactt--acccaaaaccttaaggaaataggtttatgggtcctcttacttatagggtattcaac 428  Q
    ||||||||| ||||||||  |||||||||||||||| ||| |||||||||||||||||||||||| ||| ||||||    
T  10074030 gagagagacaccacacttttacccaaaaccttaaggcaatgggtttatgggtcctcttacttataaggtgttcaac 10074105  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 356 - 428
Target Start/End: Complemental strand, 1127478 - 1127404
Alignment:
Q  356 agagagacgccacact--tacccaaaaccttaaggaaataggtttatgggtcctcttacttatagggtattcaac 428  Q
    ||||||||||||||||  ||||||||||||||||| ||| |||||||| ||||||||||||||| ||| ||||||    
T  1127478 agagagacgccacactcttacccaaaaccttaaggtaatgggtttatgagtcctcttacttataaggtgttcaac 1127404  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 348 - 417
Target Start/End: Complemental strand, 16107802 - 16107733
Alignment:
Q  348 caagcaagagagagacgccacacttacccaaaaccttaaggaaataggtttatgggtcctcttacttata 417  Q
    ||||||||||||| ||  ||| ||||||||||||||||||| ||| |||||||| |||||||||||||||    
T  16107802 caagcaagagagacaccacactcttacccaaaaccttaaggcaatgggtttatgagtcctcttacttata 16107733  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 348 - 428
Target Start/End: Complemental strand, 2378250 - 2378170
Alignment:
Q  348 caagcaagagagagacgccacacttacccaaaaccttaaggaaataggtttatgggtcctcttacttatagggtattcaac 428  Q
    ||||||||||||| ||  ||  |||||| |||||||||||| ||| |||||||||||||||||||||||| ||| ||||||    
T  2378250 caagcaagagagacaccacattcttacctaaaaccttaaggtaatgggtttatgggtcctcttacttataaggtgttcaac 2378170  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 348 - 428
Target Start/End: Complemental strand, 3058350 - 3058270
Alignment:
Q  348 caagcaagagagagacgccacacttacccaaaaccttaaggaaataggtttatgggtcctcttacttatagggtattcaac 428  Q
    ||||||||||||| ||  ||| ||||||||||||||||||| ||| ||||||||| ||||| |||||||| ||| ||||||    
T  3058350 caagcaagagagacaccacactcttacccaaaaccttaaggcaatgggtttatggatcctcatacttataaggtgttcaac 3058270  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 355 - 428
Target Start/End: Original strand, 10074402 - 10074477
Alignment:
Q  355 gagagagacgccacact--tacccaaaaccttaaggaaataggtttatgggtcctcttacttatagggtattcaac 428  Q
    ||||||||| |||||||  ||||||||||||||||| |||  ||||||||||||||||||||||| ||| ||||||    
T  10074402 gagagagacaccacactcttacccaaaaccttaaggcaatgagtttatgggtcctcttacttataaggtgttcaac 10074477  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 356 - 428
Target Start/End: Complemental strand, 16454693 - 16454619
Alignment:
Q  356 agagagacgccacact--tacccaaaaccttaaggaaataggtttatgggtcctcttacttatagggtattcaac 428  Q
    ||||||||||||||||  || |||||| ||||||| ||| |||||||||||||||||||||||| ||| ||||||    
T  16454693 agagagacgccacactcttatccaaaatcttaaggcaatgggtttatgggtcctcttacttataaggtgttcaac 16454619  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 74 - 163
Target Start/End: Original strand, 29859723 - 29859813
Alignment:
Q  74 attattttaaaataaaacaa-tgacgtgtcatattttaatttgttgtttgtaagaatgatatgttaggttcgttcctacacaagaatttct 163  Q
    |||||||||||| |||| || | |||||| ||  ||||||||||||||| ||| |||||||| ||||||||||||||||| || |||||||    
T  29859723 attattttaaaagaaaaaaaataacgtgttatgatttaatttgttgtttataaaaatgatatattaggttcgttcctacataaaaatttct 29859813  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 370 - 428
Target Start/End: Original strand, 32460636 - 32460694
Alignment:
Q  370 cttacccaaaaccttaaggaaataggtttatgggtcctcttacttatagggtattcaac 428  Q
    ||||||||||||||||||| ||| |||||||| ||||||||||||||| ||| ||||||    
T  32460636 cttacccaaaaccttaaggcaatgggtttatgagtcctcttacttataaggtgttcaac 32460694  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 370 - 428
Target Start/End: Complemental strand, 35210306 - 35210248
Alignment:
Q  370 cttacccaaaaccttaaggaaataggtttatgggtcctcttacttatagggtattcaac 428  Q
    ||||||||||||||||||| ||| | |||||||||||||||||||||| ||| ||||||    
T  35210306 cttacccaaaaccttaaggcaatggttttatgggtcctcttacttataaggtgttcaac 35210248  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 348 - 417
Target Start/End: Original strand, 2578477 - 2578546
Alignment:
Q  348 caagcaagagagagacgccacacttacccaaaaccttaaggaaataggtttatgggtcctcttacttata 417  Q
    ||||||| ||||| ||  ||| |||||||||||||||||||  || ||||||||||||||||||||||||    
T  2578477 caagcaaaagagacaccacactcttacccaaaaccttaaggctatgggtttatgggtcctcttacttata 2578546  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 348 - 428
Target Start/End: Complemental strand, 2843679 - 2843598
Alignment:
Q  348 caagcaagagagagacgccacacttacccaaaaccttaaggaaataggtttat-gggtcctcttacttatagggtattcaac 428  Q
    ||||||||||||| ||  ||| ||||||||||||||||||| |||  |||||| ||||||||||||||||| ||| ||||||    
T  2843679 caagcaagagagataccacactcttacccaaaaccttaaggcaatgagtttatggggtcctcttacttataaggtgttcaac 2843598  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 348 - 428
Target Start/End: Original strand, 2578869 - 2578949
Alignment:
Q  348 caagcaagagagagacgccacacttacccaaaaccttaaggaaataggtttatgggtcctcttacttatagggtattcaac 428  Q
    ||||||| ||||| ||  ||| ||||||||||||||||||| |||  |||||||| |||||||| ||||| ||||||||||    
T  2578869 caagcaaaagagacaccacactcttacccaaaaccttaaggtaatgagtttatggatcctcttatttataaggtattcaac 2578949  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 348 - 428
Target Start/End: Original strand, 593741 - 593823
Alignment:
Q  348 caagcaagagagagacgccacact--tacccaaaaccttaaggaaataggtttatgggtcctcttacttatagggtattcaac 428  Q
    |||| ||||||||||  |||||||  ||||||||||||||||| | | |||||||| ||||||||||||||| ||| ||||||    
T  593741 caagtaagagagagataccacactattacccaaaaccttaaggcagtcggtttatgagtcctcttacttataaggtgttcaac 593823  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 326 - 423
Target Start/End: Original strand, 2579508 - 2579601
Alignment:
Q  326 gaggttagaacaatcacacaagcaagcaagagagagacgccacactt--acccaaaaccttaaggaaataggtttatgggtcctcttacttatagggtat 423  Q
    ||||||||||||| ||||||||||||      |||||| ||| ||||  |||||||||||||||| |||  ||||||||| ||||||||||||| |||||    
T  2579508 gaggttagaacaaccacacaagcaag------agagacaccatacttttacccaaaaccttaaggcaatgagtttatgggccctcttacttataaggtat 2579601  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 348 - 417
Target Start/End: Original strand, 2579906 - 2579975
Alignment:
Q  348 caagcaagagagagacgccacacttacccaaaaccttaaggaaataggtttatgggtcctcttacttata 417  Q
    ||||||||||||| ||  ||  |||||||||||||||||||   | ||||||||||||||||||||||||    
T  2579906 caagcaagagagacaccacattcttacccaaaaccttaaggctgtgggtttatgggtcctcttacttata 2579975  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 348 - 417
Target Start/End: Complemental strand, 3409784 - 3409715
Alignment:
Q  348 caagcaagagagagacgccacacttacccaaaaccttaaggaaataggtttatgggtcctcttacttata 417  Q
    ||||||||||||| ||  ||| |||||||||||  | |||| ||| ||||||||||||||||||||||||    
T  3409784 caagcaagagagacaccacactcttacccaaaaaataaaggcaatgggtttatgggtcctcttacttata 3409715  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 348 - 428
Target Start/End: Complemental strand, 1846872 - 1846792
Alignment:
Q  348 caagcaagagagagacgccacacttacccaaaaccttaaggaaataggtttatgggtcctcttacttatagggtattcaac 428  Q
    ||||||| ||||| ||  ||| |||| |||||||||||||| ||| | ||||||||| |||||||||||| ||| ||||||    
T  1846872 caagcaaaagagacaccacactcttatccaaaaccttaaggcaatggatttatgggtgctcttacttataaggtgttcaac 1846792  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #33
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 355 - 407
Target Start/End: Original strand, 12071730 - 12071784
Alignment:
Q  355 gagagagacgccacact--tacccaaaaccttaaggaaataggtttatgggtcct 407  Q
    |||||||||||||||||  |||||||||||||||||  ||||||||||| |||||    
T  12071730 gagagagacgccacactcttacccaaaaccttaaggtcataggtttatgagtcct 12071784  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #34
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 381 - 428
Target Start/End: Complemental strand, 16108154 - 16108107
Alignment:
Q  381 ccttaaggaaataggtttatgggtcctcttacttatagggtattcaac 428  Q
    |||||||| ||| |||||||||||||||||||||||| ||| ||||||    
T  16108154 ccttaaggcaatgggtttatgggtcctcttacttataaggtgttcaac 16108107  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #35
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 370 - 428
Target Start/End: Original strand, 14748394 - 14748452
Alignment:
Q  370 cttacccaaaaccttaaggaaataggtttatgggtcctcttacttatagggtattcaac 428  Q
    ||||||||||||||||| | |||  ||||||||||||||||| ||||| ||| ||||||    
T  14748394 cttacccaaaaccttaacgcaatgagtttatgggtcctcttatttataaggtgttcaac 14748452  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #36
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 348 - 417
Target Start/End: Complemental strand, 26544173 - 26544104
Alignment:
Q  348 caagcaagagagagacgccacacttacccaaaaccttaaggaaataggtttatgggtcctcttacttata 417  Q
    ||||||||||||| |   ||| ||||| |||||||||||||   | ||||||||||||||||||||||||    
T  26544173 caagcaagagagacatcacactcttactcaaaaccttaaggcggtgggtttatgggtcctcttacttata 26544104  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #37
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 355 - 428
Target Start/End: Original strand, 10073655 - 10073730
Alignment:
Q  355 gagagagacgccacact--tacccaaaaccttaaggaaataggtttatgggtcctcttacttatagggtattcaac 428  Q
    ||||||||| |||||||  ||||||||| ||||||  |||  |||||||| |||||||||||||| ||| ||||||    
T  10073655 gagagagacaccacactcttacccaaaatcttaagccaatgagtttatggatcctcttacttataaggtgttcaac 10073730  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 128; Significance: 5e-66; HSPs: 65)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 128; E-Value: 5e-66
Query Start/End: Original strand, 16 - 167
Target Start/End: Complemental strand, 23346567 - 23346416
Alignment:
Q  16 aaataatggttgagagagaggaagagcagttatttttcatttcttaaattatttcctaattattttaaaataaaacaatgacgtgtcatattttaatttg 115  Q
    ||||||||||||||||||||||  |||||||||||||||||||||||||||||||| |||||||||||||||||| ||||||||||||| |||||||||     
T  23346567 aaataatggttgagagagaggagtagcagttatttttcatttcttaaattatttccaaattattttaaaataaaaaaatgacgtgtcatgttttaattta 23346468  T
Q  116 ttgtttgtaagaatgatatgttaggttcgttcctacacaagaatttctctat 167  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  23346467 ttgtttgtaagaatgatatgttaggttcgttcctacacaagaatttctctat 23346416  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 125; E-Value: 3e-64
Query Start/End: Original strand, 16 - 164
Target Start/End: Complemental strand, 50893111 - 50892963
Alignment:
Q  16 aaataatggttgagagagaggaagagcagttatttttcatttcttaaattatttcctaattattttaaaataaaacaatgacgtgtcatattttaatttg 115  Q
    ||||||||||||||||||||||  ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||    
T  50893111 aaataatggttgagagagaggagaagcagttatttttcatttcttaaattatttcctaattattttaaaataaaacaatgacgtgtcatgttttaatttg 50893012  T
Q  116 ttgtttgtaagaatgatatgttaggttcgttcctacacaagaatttctc 164  Q
    ||||||||||||||||||||||| ||||||| |||||||| ||||||||    
T  50893011 ttgtttgtaagaatgatatgttaagttcgttgctacacaaaaatttctc 50892963  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 117; E-Value: 2e-59
Query Start/End: Original strand, 16 - 164
Target Start/End: Complemental strand, 41834022 - 41833874
Alignment:
Q  16 aaataatggttgagagagaggaagagcagttatttttcatttcttaaattatttcctaattattttaaaataaaacaatgacgtgtcatattttaatttg 115  Q
    |||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||| ||||||||||    
T  41834022 aaataatggttgagagagaggaggagcagttatttttcatttcttaaattatttcctaattattttaaaataaaataatgacgtgtcatgttttaatttg 41833923  T
Q  116 ttgtttgtaagaatgatatgttaggttcgttcctacacaagaatttctc 164  Q
    |||| |||||||||||||| |||| |||||| ||| |||||||||||||    
T  41833922 ttgtgtgtaagaatgatatattagattcgtttctatacaagaatttctc 41833874  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 109; E-Value: 1e-54
Query Start/End: Original strand, 16 - 163
Target Start/End: Original strand, 39669176 - 39669321
Alignment:
Q  16 aaataatggttgagagagaggaagagcagttatttttcatttcttaaattatttcctaattattttaaaataaaacaatgacgtgtcatattttaatttg 115  Q
    ||||||||||||||||||  || |||||||||||||||||||| ||||||||||||||||||||||||||||||||||| ||||||||| ||||||||||    
T  39669176 aaataatggttgagagag--gaggagcagttatttttcatttcctaaattatttcctaattattttaaaataaaacaataacgtgtcatgttttaatttg 39669273  T
Q  116 ttgtttgtaagaatgatatgttaggttcgttcctacacaagaatttct 163  Q
    || |||||||||||||||||||| ||||||| ||||||||||||||||    
T  39669274 ttctttgtaagaatgatatgttaagttcgtttctacacaagaatttct 39669321  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 93; E-Value: 4e-45
Query Start/End: Original strand, 16 - 164
Target Start/End: Original strand, 42180688 - 42180834
Alignment:
Q  16 aaataatggttgagagagaggaagagcagttatttttcatttcttaaattatttcctaattattttaaaataaaacaatgacgtgtcatattttaatttg 115  Q
    ||||||||||||||||| |||| ||||||||||||||||||||||||||||||| |||||||||||||||||||| ||||| ||||||| ||||| ||||    
T  42180688 aaataatggttgagagaaaggaggagcagttatttttcatttcttaaattattttctaattattttaaaataaaataatgatgtgtcatgttttagtttg 42180787  T
Q  116 ttgtttgtaagaatgatatgttaggttcgttcctacacaagaatttctc 164  Q
    ||||||||||||||||||| |||| |||||| | | |||||||||||||    
T  42180788 ttgtttgtaagaatgatat-ttagattcgtttc-atacaagaatttctc 42180834  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 91; E-Value: 6e-44
Query Start/End: Original strand, 16 - 164
Target Start/End: Original strand, 48871364 - 48871501
Alignment:
Q  16 aaataatggttgagagagaggaagagcagttatttttcatttcttaaattatttcctaattattttaaaataaaacaatgacgtgtcatattttaatttg 115  Q
    ||||||| |||||||||||||| |||||||||||||||||||||||||||           ||||||||||||||||||||||||  || ||||||||||    
T  48871364 aaataatagttgagagagaggaggagcagttatttttcatttcttaaatt-----------attttaaaataaaacaatgacgtgcaatgttttaatttg 48871452  T
Q  116 ttgtttgtaagaatgatatgttaggttcgttcctacacaagaatttctc 164  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||    
T  48871453 ttgtttgtaagaatgatatgttaggttcgttcctacacaagaatttctc 48871501  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 88; E-Value: 4e-42
Query Start/End: Original strand, 16 - 165
Target Start/End: Original strand, 28217646 - 28217784
Alignment:
Q  16 aaataatggttgagagagaggaagagcagttatttttcatttcttaaattatttcctaattattttaaaataaaacaatgacgtgtcatattttaatttg 115  Q
    |||||||||||||||||||||| ||||| |||||||||||||||||||||           |||||||||||||||||||| ||||||| |||| |||||    
T  28217646 aaataatggttgagagagaggaggagcaattatttttcatttcttaaatt-----------attttaaaataaaacaatgatgtgtcatgttttgatttg 28217734  T
Q  116 ttgtttgtaagaatgatatgttaggttcgttcctacacaagaatttctct 165  Q
    |||||||||||||||||||||||||||||||||||||||| |||||||||    
T  28217735 ttgtttgtaagaatgatatgttaggttcgttcctacacaataatttctct 28217784  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 16 - 100
Target Start/End: Original strand, 4157009 - 4157093
Alignment:
Q  16 aaataatggttgagagagaggaagagcagttatttttcatttcttaaattatttcctaattattttaaaataaaacaatgacgtg 100  Q
    |||||||||||||||||||||| ||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||    
T  4157009 aaataatggttgagagagaggaggagcagttatttttcatttcttaaattatttccaaattattttaaaataaaacaatgacgtg 4157093  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 54 - 163
Target Start/End: Complemental strand, 50905103 - 50904992
Alignment:
Q  54 atttcttaaattatttcctaattattttaaaataaaacaatgacgtgtcatattttaatttgttgtttgtaagaatg--atatgttaggttcgttcctac 151  Q
    |||||||||||||||||| ||| |||||||||||||||||||||||||||| |||||| ||||||||||||| ||||  |||| ||||||||||||||||    
T  50905103 atttcttaaattatttccaaataattttaaaataaaacaatgacgtgtcatgttttaacttgttgtttgtaaaaatgatatatattaggttcgttcctac 50905004  T
Q  152 acaagaatttct 163  Q
    ||||||||||||    
T  50905003 acaagaatttct 50904992  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 73; E-Value: 3e-33
Query Start/End: Original strand, 72 - 164
Target Start/End: Original strand, 26552164 - 26552256
Alignment:
Q  72 taattattttaaaataaaacaatgacgtgtcatattttaatttgttgtttgtaagaatgatatgttaggttcgttcctacacaagaatttctc 164  Q
    |||||||||||||| ||||||| |||||||||||||||||||||||||||||||| |||||| |||||||||| |||||||||||||||||||    
T  26552164 taattattttaaaagaaaacaacgacgtgtcatattttaatttgttgtttgtaaggatgataggttaggttcgatcctacacaagaatttctc 26552256  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 69; E-Value: 8e-31
Query Start/End: Original strand, 72 - 164
Target Start/End: Complemental strand, 10227804 - 10227712
Alignment:
Q  72 taattattttaaaataaaacaatgacgtgtcatattttaatttgttgtttgtaagaatgatatgttaggttcgttcctacacaagaatttctc 164  Q
    |||||||||||||| ||||||| |||||||||| ||||||||||||||||||||| ||| || ||||||||||||||||||||||||||||||    
T  10227804 taattattttaaaagaaaacaacgacgtgtcatgttttaatttgttgtttgtaaggatggtaggttaggttcgttcctacacaagaatttctc 10227712  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 16 - 137
Target Start/End: Complemental strand, 7062142 - 7062034
Alignment:
Q  16 aaataatggttgagagagaggaagagcagttatttttcatttcttaaattatttcctaattattttaaaataaaacaatgacgtgtcatattttaatttg 115  Q
    ||||||||||||||||||  || |||||||||||||||||||||||||||||||           |||||||||||||||||||||||| ||||||||||    
T  7062142 aaataatggttgagagag--gaggagcagttatttttcatttcttaaattattt-----------taaaataaaacaatgacgtgtcatgttttaatttg 7062056  T
Q  116 ttgtttgtaagaatgatatgtt 137  Q
    ||||||||||||||||||||||    
T  7062055 ttgtttgtaagaatgatatgtt 7062034  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 59; E-Value: 7e-25
Query Start/End: Original strand, 87 - 165
Target Start/End: Original strand, 7062184 - 7062261
Alignment:
Q  87 aaaacaatgacgtgtcatattttaatttgttgtttgtaagaatgatatgttaggttcgttcctacacaagaatttctct 165  Q
    |||| |||||||||||||||||||||||||||||||||| ||||||| ||||||||||||||||||||| |||||||||    
T  7062184 aaaaaaatgacgtgtcatattttaatttgttgtttgtaaaaatgata-gttaggttcgttcctacacaaaaatttctct 7062261  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 59; E-Value: 7e-25
Query Start/End: Original strand, 87 - 165
Target Start/End: Original strand, 10227899 - 10227977
Alignment:
Q  87 aaaacaatgacgtgtcatattttaatttgttgtttgtaagaatgatatgttaggttcgttcctacacaagaatttctct 165  Q
    |||| ||||| ||||||| ||||||||||||||||||||| |||||| |||||||||||||||||||||||||||||||    
T  10227899 aaaataatgatgtgtcatgttttaatttgttgtttgtaaggatgataggttaggttcgttcctacacaagaatttctct 10227977  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 87 - 160
Target Start/End: Complemental strand, 19059451 - 19059378
Alignment:
Q  87 aaaacaatgacgtgtcatattttaatttgttgtttgtaagaatgatatgttaggttcgttcctacacaagaatt 160  Q
    ||||||| |||||||||| ||||||||||||||||||||| |||||| ||||||||||||||||||||||||||    
T  19059451 aaaacaacgacgtgtcatgttttaatttgttgtttgtaaggatgataggttaggttcgttcctacacaagaatt 19059378  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 92 - 164
Target Start/End: Original strand, 48752586 - 48752657
Alignment:
Q  92 aatgacgtgtcatattttaatttgttgtttgtaagaatgatatgttaggttcgttcctacacaagaatttctc 164  Q
    ||||||||||||| |||||||||||||||||||||||||||| ||||||||||||| ||||||||||||||||    
T  48752586 aatgacgtgtcatgttttaatttgttgtttgtaagaatgata-gttaggttcgttcatacacaagaatttctc 48752657  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 72 - 155
Target Start/End: Original strand, 19059550 - 19059633
Alignment:
Q  72 taattattttaaaataaaacaatgacgtgtcatattttaatttgttgtttgtaagaatgatatgttaggttcgttcctacacaa 155  Q
    |||||||||||||| ||||||| || |||||||||||||||||||| ||| |||| |||||| |||||||||||||||||||||    
T  19059550 taattattttaaaagaaaacaacgatgtgtcatattttaatttgttctttataaggatgataggttaggttcgttcctacacaa 19059633  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 87 - 165
Target Start/End: Complemental strand, 28217606 - 28217529
Alignment:
Q  87 aaaacaatgacgtgtcatattttaatttgttgtttgtaagaatgatatgttaggttcgttcctacacaagaatttctct 165  Q
    |||| ||||||||||||| ||||||||||||||||||||||||||||  ||||||||||||||||||| ||||||||||    
T  28217606 aaaaaaatgacgtgtcatgttttaatttgttgtttgtaagaatgata-attaggttcgttcctacacaggaatttctct 28217529  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 87 - 164
Target Start/End: Complemental strand, 48871323 - 48871247
Alignment:
Q  87 aaaacaatgacgtgtcatattttaatttgttgtttgtaagaatgatatgttaggttcgttcctacacaagaatttctc 164  Q
    |||| ||||| ||||||| |||||||||||| ||||||||||||||| ||||||||||||||||||||||||||||||    
T  48871323 aaaaaaatgatgtgtcatgttttaatttgttatttgtaagaatgata-gttaggttcgttcctacacaagaatttctc 48871247  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 87 - 164
Target Start/End: Original strand, 50893150 - 50893226
Alignment:
Q  87 aaaacaatgacgtgtcatattttaatttgttgtttgtaagaatgatatgttaggttcgttcctacacaagaatttctc 164  Q
    |||| ||||| ||||||| |||||||||||||||||||| ||||||| ||||||||||||||||||||||||||||||    
T  50893150 aaaaaaatgatgtgtcatgttttaatttgttgtttgtaataatgata-gttaggttcgttcctacacaagaatttctc 50893226  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 87 - 162
Target Start/End: Complemental strand, 26552067 - 26551992
Alignment:
Q  87 aaaacaatgacgtgtcatattttaatttgttgtttgtaagaatgatatgttaggttcgttcctacacaagaatttc 162  Q
    ||||||| |||||| ||||||||||||| ||||||||||| |||||| ||||| ||||||||||||||||||||||    
T  26552067 aaaacaacgacgtgccatattttaattttttgtttgtaaggatgataggttagattcgttcctacacaagaatttc 26551992  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 93 - 164
Target Start/End: Complemental strand, 42180641 - 42180571
Alignment:
Q  93 atgacgtgtcatattttaatttgttgtttgtaagaatgatatgttaggttcgttcctacacaagaatttctc 164  Q
    |||||||||||| |||||||||||||||||||| |||| || ||||||||||||||||||||||||||||||    
T  42180641 atgacgtgtcatgttttaatttgttgtttgtaataatgcta-gttaggttcgttcctacacaagaatttctc 42180571  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 87 - 164
Target Start/End: Complemental strand, 4156968 - 4156892
Alignment:
Q  87 aaaacaatgacgtgtcatattttaatttgttgtttgtaagaatgatatgttaggttcgttcctacacaagaatttctc 164  Q
    |||| ||||||||||||| ||||||||| || ||||||||||||||| ||||||||| ||||||||||||||||||||    
T  4156968 aaaaaaatgacgtgtcatgttttaatttattatttgtaagaatgata-gttaggttccttcctacacaagaatttctc 4156892  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 93 - 164
Target Start/End: Original strand, 41834069 - 41834139
Alignment:
Q  93 atgacgtgtcatattttaatttgttgtttgtaagaatgatatgttaggttcgttcctacacaagaatttctc 164  Q
    |||||||||||| |||||||||||||||||||| |||| || |||| |||||||||||||||||||||||||    
T  41834069 atgacgtgtcatgttttaatttgttgtttgtaataatgcta-gttatgttcgttcctacacaagaatttctc 41834139  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 92 - 163
Target Start/End: Original strand, 50905104 - 50905175
Alignment:
Q  92 aatgacgtgtcatattttaatttgttgtttgtaagaatgatatgttaggttcgttcctacacaagaatttct 163  Q
    |||||||| |||| |||||||||||||||||||||||||||||||||| ||||||  ||||||| |||||||    
T  50905104 aatgacgtatcatgttttaatttgttgtttgtaagaatgatatgttagattcgtttttacacaaaaatttct 50905175  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 87 - 155
Target Start/End: Original strand, 23346608 - 23346675
Alignment:
Q  87 aaaacaatgacgtgtcatattttaatttgttgtttgtaagaatgatatgttaggttcgttcctacacaa 155  Q
    |||| |||||| |||||| ||||||||| |||||||||||||||||| |||||||||||||||||||||    
T  23346608 aaaaaaatgacatgtcatgttttaatttattgtttgtaagaatgata-gttaggttcgttcctacacaa 23346675  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 352 - 427
Target Start/End: Original strand, 66123 - 66200
Alignment:
Q  352 caagagagagacgccacact--tacccaaaaccttaaggaaataggtttatgggtcctcttacttatagggtattcaa 427  Q
    |||| ||||| |||||||||  |||||||||||||||||  ||||||||||||||||||||||||||| ||| |||||    
T  66123 caagtgagaggcgccacactcttacccaaaaccttaaggccataggtttatgggtcctcttacttataaggtgttcaa 66200  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 355 - 417
Target Start/End: Complemental strand, 17294696 - 17294632
Alignment:
Q  355 gagagagacgccacact--tacccaaaaccttaaggaaataggtttatgggtcctcttacttata 417  Q
    ||||||||| |||||||  ||||||||||||||||| ||| ||||||||||||||||||||||||    
T  17294696 gagagagacaccacactcttacccaaaaccttaaggcaatgggtttatgggtcctcttacttata 17294632  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 371 - 428
Target Start/End: Original strand, 44290882 - 44290939
Alignment:
Q  371 ttacccaaaaccttaaggaaataggtttatgggtcctcttacttatagggtattcaac 428  Q
    |||||||||||||||||| ||| |||||||||||||||||||||||| ||| ||||||    
T  44290882 ttacccaaaaccttaaggcaatgggtttatgggtcctcttacttataaggtgttcaac 44290939  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 352 - 417
Target Start/End: Original strand, 50052061 - 50052126
Alignment:
Q  352 caagagagagacgccacacttacccaaaaccttaaggaaataggtttatgggtcctcttacttata 417  Q
    ||||||||| ||  ||| |||||||||||| ||||| |||||||||||||||||||||||||||||    
T  50052061 caagagagacaccacactcttacccaaaactttaagaaaataggtttatgggtcctcttacttata 50052126  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 348 - 428
Target Start/End: Original strand, 26661932 - 26662012
Alignment:
Q  348 caagcaagagagagacgccacacttacccaaaaccttaaggaaataggtttatgggtcctcttacttatagggtattcaac 428  Q
    ||||||||||||| ||  ||| ||||||||||||||||||| ||| |||||||||||| ||| ||||||| ||| ||||||    
T  26661932 caagcaagagagacaccacactcttacccaaaaccttaaggcaatcggtttatgggtcttctcacttataaggtgttcaac 26662012  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 355 - 428
Target Start/End: Complemental strand, 34365044 - 34364969
Alignment:
Q  355 gagagagacgccacact--tacccaaaaccttaaggaaataggtttatgggtcctcttacttatagggtattcaac 428  Q
    ||||||||| |||||||  |||||||||||||||||  || |||||||||||||||||||||||| ||| ||||||    
T  34365044 gagagagacaccacactcttacccaaaaccttaaggctatgggtttatgggtcctcttacttataaggtgttcaac 34364969  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 356 - 428
Target Start/End: Complemental strand, 14318985 - 14318911
Alignment:
Q  356 agagagacgccacact--tacccaaaaccttaaggaaataggtttatgggtcctcttacttatagggtattcaac 428  Q
    |||||||| |||||||  ||||||||||||||||| ||||| |||||||||| ||||||||||| ||| ||||||    
T  14318985 agagagacaccacactcttacccaaaaccttaaggcaatagatttatgggtcttcttacttataaggtgttcaac 14318911  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 370 - 417
Target Start/End: Original strand, 44290514 - 44290561
Alignment:
Q  370 cttacccaaaaccttaaggaaataggtttatgggtcctcttacttata 417  Q
    ||||||||||||||||||| ||| ||||||||||||||||||||||||    
T  44290514 cttacccaaaaccttaaggcaatgggtttatgggtcctcttacttata 44290561  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 350 - 428
Target Start/End: Complemental strand, 3550842 - 3550764
Alignment:
Q  350 agcaagagagagacgccacacttacccaaaaccttaaggaaataggtttatgggtcctcttacttatagggtattcaac 428  Q
    ||||||||||| ||  ||| |||||||||||| |||||| ||| |||||||| ||||||||||||||| ||| ||||||    
T  3550842 agcaagagagacaccacactcttacccaaaactttaaggcaatgggtttatgagtcctcttacttataaggtgttcaac 3550764  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 370 - 428
Target Start/End: Original strand, 31767217 - 31767275
Alignment:
Q  370 cttacccaaaaccttaaggaaataggtttatgggtcctcttacttatagggtattcaac 428  Q
    ||||||||||||||||||| | |||||| ||||||||||||||||||| ||| ||||||    
T  31767217 cttacccaaaaccttaaggcattaggttaatgggtcctcttacttataaggtgttcaac 31767275  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 348 - 417
Target Start/End: Original strand, 38804389 - 38804458
Alignment:
Q  348 caagcaagagagagacgccacacttacccaaaaccttaaggaaataggtttatgggtcctcttacttata 417  Q
    ||||||||||||| ||  ||| |||||||||||||||||||  || ||||||||| ||||||||||||||    
T  38804389 caagcaagagagacactacactcttacccaaaaccttaaggttatgggtttatggatcctcttacttata 38804458  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 356 - 428
Target Start/End: Complemental strand, 41142491 - 41142416
Alignment:
Q  356 agagagacgccacact---tacccaaaaccttaaggaaataggtttatgggtcctcttacttatagggtattcaac 428  Q
    ||||||||||||||||   |||| |||||||||||| ||| |||||||||||||| ||||||||| ||| ||||||    
T  41142491 agagagacgccacactctttaccaaaaaccttaaggcaatgggtttatgggtccttttacttataaggtgttcaac 41142416  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 355 - 428
Target Start/End: Original strand, 22077534 - 22077609
Alignment:
Q  355 gagagagacgccacact--tacccaaaaccttaaggaaataggtttatgggtcctcttacttatagggtattcaac 428  Q
    |||||||||||||||||  |||||||||||||||||  |   ||||||||||||||||||||||| ||| ||||||    
T  22077534 gagagagacgccacactcttacccaaaaccttaaggctacgagtttatgggtcctcttacttataaggtgttcaac 22077609  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 355 - 428
Target Start/End: Original strand, 26661561 - 26661636
Alignment:
Q  355 gagagagacgccacact--tacccaaaaccttaaggaaataggtttatgggtcctcttacttatagggtattcaac 428  Q
    ||||||||| |||||||  ||||||||||||||||| |||  ||||||||||||||| ||||||| ||| ||||||    
T  26661561 gagagagacaccacactcttacccaaaaccttaaggcaatgagtttatgggtcctctcacttataaggtgttcaac 26661636  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 348 - 428
Target Start/End: Original strand, 32594750 - 32594830
Alignment:
Q  348 caagcaagagagagacgccacacttacccaaaaccttaaggaaataggtttatgggtcctcttacttatagggtattcaac 428  Q
    |||| |||||||| ||  ||| ||||||||||||||||||  |||  ||||||||||||||||||||||| ||| ||||||    
T  32594750 caagtaagagagacaccacactcttacccaaaaccttaagacaatgagtttatgggtcctcttacttataaggtgttcaac 32594830  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 348 - 428
Target Start/End: Complemental strand, 41157115 - 41157035
Alignment:
Q  348 caagcaagagagagacgccacacttacccaaaaccttaaggaaataggtttatgggtcctcttacttatagggtattcaac 428  Q
    ||||||| ||||| ||  ||| ||||||||||||||||| | |||  ||||||||||||||||||||||| ||| ||||||    
T  41157115 caagcaatagagacaccacactcttacccaaaaccttaaagcaatgagtttatgggtcctcttacttataaggtgttcaac 41157035  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 348 - 428
Target Start/End: Complemental strand, 41157499 - 41157419
Alignment:
Q  348 caagcaagagagagacgccacacttacccaaaaccttaaggaaataggtttatgggtcctcttacttatagggtattcaac 428  Q
    ||||||||| ||| ||  ||| ||||| |||||||| |||| ||| |||||||||||||||||||||||| ||| ||||||    
T  41157499 caagcaagacagacaccacactcttactcaaaacctaaaggcaatgggtttatgggtcctcttacttataaggtgttcaac 41157419  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 349 - 428
Target Start/End: Original strand, 5320000 - 5320079
Alignment:
Q  349 aagcaagagagagacgccacacttacccaaaaccttaaggaaataggtttatgggtcctcttacttatagggtattcaac 428  Q
    |||||||||||| ||  ||| |||||||||||||||||||  ||  ||||||||||||||| ||||||| ||| ||||||    
T  5320000 aagcaagagagacactacactcttacccaaaaccttaaggctatgagtttatgggtcctctcacttataaggtgttcaac 5320079  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 349 - 428
Target Start/End: Complemental strand, 41759606 - 41759527
Alignment:
Q  349 aagcaagagagagacgccacacttacccaaaaccttaaggaaataggtttatgggtcctcttacttatagggtattcaac 428  Q
    |||||||||||| ||  ||| ||||||||||||||||||| ||| | ||||||| || ||||||||||| ||| ||||||    
T  41759606 aagcaagagagacaccacactcttacccaaaaccttaaggcaatggatttatggatcatcttacttataaggtgttcaac 41759527  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 370 - 428
Target Start/End: Original strand, 66528 - 66586
Alignment:
Q  370 cttacccaaaaccttaaggaaataggtttatgggtcctcttacttatagggtattcaac 428  Q
    |||||||||||||||||||  ||| |||||||| |||||||||||||| ||| ||||||    
T  66528 cttacccaaaaccttaaggccatatgtttatggatcctcttacttataaggtgttcaac 66586  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 348 - 417
Target Start/End: Complemental strand, 9956033 - 9955963
Alignment:
Q  348 caagcaagagagagacgccacacttacccaaaaccttaaggaaataggttt-atgggtcctcttacttata 417  Q
    ||||||||||||| |   ||| ||||||||||||||||||| ||| ||||| |||||||||||||||||||    
T  9956033 caagcaagagagacatcacactcttacccaaaaccttaaggcaattggtttaatgggtcctcttacttata 9955963  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #48
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 370 - 428
Target Start/End: Complemental strand, 11977382 - 11977324
Alignment:
Q  370 cttacccaaaaccttaaggaaataggtttatgggtcctcttacttatagggtattcaac 428  Q
    ||||||||||||||||||| | |||||||||| || |||||||||||| ||| ||||||    
T  11977382 cttacccaaaaccttaaggcattaggtttatgagtgctcttacttataaggtgttcaac 11977324  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #49
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 370 - 428
Target Start/End: Original strand, 22077166 - 22077224
Alignment:
Q  370 cttacccaaaaccttaaggaaataggtttatgggtcctcttacttatagggtattcaac 428  Q
    |||| ||||||||||| || |||  ||||||||||||||||||||||| ||||||||||    
T  22077166 cttatccaaaaccttagggcaatgagtttatgggtcctcttacttataaggtattcaac 22077224  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #50
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 87 - 133
Target Start/End: Complemental strand, 39669133 - 39669087
Alignment:
Q  87 aaaacaatgacgtgtcatattttaatttgttgtttgtaagaatgata 133  Q
    |||| |||||||| |||||||||||||| ||||||||||||||||||    
T  39669133 aaaaaaatgacgtatcatattttaatttattgtttgtaagaatgata 39669087  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #51
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 355 - 417
Target Start/End: Original strand, 3875370 - 3875434
Alignment:
Q  355 gagagagacgccaca--cttacccaaaaccttaaggaaataggtttatgggtcctcttacttata 417  Q
    ||||||||| |||||  |||||| |||||||||||| ||| |||||||| |||||||||||||||    
T  3875370 gagagagactccacattcttacctaaaaccttaaggcaatgggtttatgagtcctcttacttata 3875434  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #52
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 351 - 428
Target Start/End: Complemental strand, 29798320 - 29798243
Alignment:
Q  351 gcaagagagagacgccacacttacccaaaaccttaaggaaataggtttatgggtcctcttacttatagggtattcaac 428  Q
    |||||||||| ||  ||| |||| |||| ||||||||| ||| |||||||| ||||||||||||||| ||| ||||||    
T  29798320 gcaagagagacaccacactcttatccaagaccttaaggcaatgggtttatgagtcctcttacttataaggtgttcaac 29798243  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #53
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 348 - 417
Target Start/End: Complemental strand, 37556235 - 37556167
Alignment:
Q  348 caagcaagagagagacgccacacttacccaaaaccttaaggaaataggtttatgggtcctcttacttata 417  Q
    ||||||||||||| ||  ||| |||||||||||||||||||  || ||||||| ||||||||||||||||    
T  37556235 caagcaagagagacaccacactcttacccaaaaccttaaggctatgggtttat-ggtcctcttacttata 37556167  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #54
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 348 - 428
Target Start/End: Original strand, 3537633 - 3537713
Alignment:
Q  348 caagcaagagagagacgccacacttacccaaaaccttaaggaaataggtttatgggtcctcttacttatagggtattcaac 428  Q
    |||||||||||||  |  ||| ||||||||||||||||||  ||| ||||||| |||||||||||| ||| ||| ||||||    
T  3537633 caagcaagagagacgccacactcttacccaaaaccttaagccaatgggtttataggtcctcttactcataaggtgttcaac 3537713  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #55
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 356 - 417
Target Start/End: Original strand, 5528794 - 5528857
Alignment:
Q  356 agagagacgccacac--ttacccaaaaccttaaggaaataggtttatgggtcctcttacttata 417  Q
    |||||||||||||||  ||||||||||||||||| ||||  ||||||| ||||||||| |||||    
T  5528794 agagagacgccacacatttacccaaaaccttaagaaaatgagtttatgagtcctcttatttata 5528857  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #56
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 352 - 428
Target Start/End: Original strand, 44043810 - 44043886
Alignment:
Q  352 caagagagagacgccacacttacccaaaaccttaaggaaataggtttatgggtcctcttacttatagggtattcaac 428  Q
    ||||||||| ||  ||| ||||||||||| ||||||  ||| |||||||||||| ||||||||||| ||| ||||||    
T  44043810 caagagagacaccacactcttacccaaaatcttaagacaatgggtttatgggtcatcttacttataaggtgttcaac 44043886  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #57
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 348 - 411
Target Start/End: Original strand, 32168732 - 32168795
Alignment:
Q  348 caagcaagagagagacgccacacttacccaaaaccttaaggaaataggtttatgggtcctctta 411  Q
    |||||||||||||  |  ||| |||||||||||||| |||| ||| ||||||||||||||||||    
T  32168732 caagcaagagagacgccacactcttacccaaaacctcaaggcaatgggtttatgggtcctctta 32168795  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #58
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 378 - 417
Target Start/End: Original strand, 41184489 - 41184528
Alignment:
Q  378 aaaccttaaggaaataggtttatgggtcctcttacttata 417  Q
    ||||||||||| ||| ||||||||||||||||||||||||    
T  41184489 aaaccttaaggcaatgggtttatgggtcctcttacttata 41184528  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #59
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 353 - 428
Target Start/End: Complemental strand, 5575225 - 5575148
Alignment:
Q  353 aagagagagacgccacact--tacccaaaaccttaaggaaataggtttatgggtcctcttacttatagggtattcaac 428  Q
    |||||||||||||||||||  || |||||||||||| |  || | ||||| |||||||||||||||| ||| ||||||    
T  5575225 aagagagagacgccacactcttatccaaaaccttaaagctatggatttataggtcctcttacttataaggtgttcaac 5575148  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #60
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 370 - 428
Target Start/End: Complemental strand, 34364609 - 34364551
Alignment:
Q  370 cttacccaaaaccttaaggaaataggtttatgggtcctcttacttatagggtattcaac 428  Q
    |||||||||||||||||||  || |||||| || |||||||||||||| ||| ||||||    
T  34364609 cttacccaaaaccttaaggctatgggtttacggatcctcttacttataaggtgttcaac 34364551  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #61
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 355 - 428
Target Start/End: Original strand, 24132027 - 24132099
Alignment:
Q  355 gagagagacgccacacttacccaaaaccttaaggaaataggtttatgggtcctcttacttatagggtattcaac 428  Q
    ||||||||| |||||||||||| ||||||||||| |||  |||||||| ||| |||| ||||| ||| ||||||    
T  24132027 gagagagacaccacacttaccc-aaaccttaaggcaatgagtttatggatccccttatttataaggtgttcaac 24132099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #62
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 348 - 417
Target Start/End: Complemental strand, 45839755 - 45839686
Alignment:
Q  348 caagcaagagagagacgccacacttacccaaaaccttaaggaaataggtttatgggtcctcttacttata 417  Q
    ||||||||||||| ||  ||  ||||||||||||||||||| | ||  |||||||||| |||||||||||    
T  45839755 caagcaagagagacaccacaatcttacccaaaaccttaaggcattacatttatgggtcttcttacttata 45839686  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #63
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 365 - 417
Target Start/End: Original strand, 30630689 - 30630741
Alignment:
Q  365 ccacacttacccaaaaccttaaggaaataggtttatgggtcctcttacttata 417  Q
    |||| |||||||||||| |||||| |||  |||||||||| ||||||||||||    
T  30630689 ccactcttacccaaaactttaaggcaatgtgtttatgggttctcttacttata 30630741  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #64
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 348 - 428
Target Start/End: Complemental strand, 40082530 - 40082451
Alignment:
Q  348 caagcaagagagagacgccacacttacccaaaaccttaaggaaataggtttatgggtcctcttacttatagggtattcaac 428  Q
    ||||||||||||| ||  ||| ||||||||||||||||||| |||   ||||| | |||||||||||||| ||| ||||||    
T  40082530 caagcaagagagataccacactcttacccaaaaccttaaggcaatgaatttat-gatcctcttacttataaggtgttcaac 40082451  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #65
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 348 - 428
Target Start/End: Original strand, 48588522 - 48588602
Alignment:
Q  348 caagcaagagagagacgccacacttacccaaaaccttaaggaaataggtttatgggtcctcttacttatagggtattcaac 428  Q
    |||| |||||||| ||  ||| ||||||||||||||||||| |||   |||| ||||| ||||||||||| ||| ||||||    
T  48588522 caagtaagagagacaccgcactcttacccaaaaccttaaggcaatgaatttacgggtcttcttacttataaggtgttcaac 48588602  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 126; Significance: 8e-65; HSPs: 62)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 126; E-Value: 8e-65
Query Start/End: Original strand, 16 - 169
Target Start/End: Original strand, 18936793 - 18936946
Alignment:
Q  16 aaataatggttgagagagaggaagagcagttatttttcatttcttaaattatttcctaattattttaaaataaaacaatgacgtgtcatattttaatttg 115  Q
    |||||||||| ||||||||||| ||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||| |||||||||     
T  18936793 aaataatggtcgagagagaggaggagcagttatttttcatttcttaaattatttccaaattattttaaaataaaacaatgacgtgtcatgttttaattta 18936892  T
Q  116 ttgtttgtaagaatgatatgttaggttcgttcctacacaagaatttctctataa 169  Q
    ||||||||||||||||||| ||||||||||||||| ||||||||||||||||||    
T  18936893 ttgtttgtaagaatgatatattaggttcgttcctagacaagaatttctctataa 18936946  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 122; E-Value: 2e-62
Query Start/End: Original strand, 16 - 165
Target Start/End: Original strand, 37177742 - 37177891
Alignment:
Q  16 aaataatggttgagagagaggaagagcagttatttttcatttcttaaattatttcctaattattttaaaataaaacaatgacgtgtcatattttaatttg 115  Q
    |||||||||||||||||||||| |||| |||||||||||||||||||||||||||| ||||||||||||||||||||||||||| |||| ||||||||||    
T  37177742 aaataatggttgagagagaggaggagctgttatttttcatttcttaaattatttccaaattattttaaaataaaacaatgacgtatcatgttttaatttg 37177841  T
Q  116 ttgtttgtaagaatgatatgttaggttcgttcctacacaagaatttctct 165  Q
    ||||||||||||||||||||||| ||||||||||| ||||||||||||||    
T  37177842 ttgtttgtaagaatgatatgttatgttcgttcctagacaagaatttctct 37177891  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 114; E-Value: 1e-57
Query Start/End: Original strand, 16 - 168
Target Start/End: Complemental strand, 11147167 - 11147010
Alignment:
Q  16 aaataatggttgagagagaggaagagcagttatttttcatttcttaaattatttcctaattattttaaaataaaacaatgac-----gtgtcatatttta 110  Q
    |||||||||||||||||||||| ||||| ||||||||| ||||||||||||||||| |||||||||||||||||||||||||     ||||||| |||||    
T  11147167 aaataatggttgagagagaggaggagcatttatttttcctttcttaaattatttccaaattattttaaaataaaacaatgacaagacgtgtcatgtttta 11147068  T
Q  111 atttgttgtttgtaagaatgatatgttaggttcgttcctacacaagaatttctctata 168  Q
    |||||||||||||||||||||||| |||||||||||||||||||||||||||||||||    
T  11147067 atttgttgtttgtaagaatgatatattaggttcgttcctacacaagaatttctctata 11147010  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 73; E-Value: 3e-33
Query Start/End: Original strand, 72 - 164
Target Start/End: Original strand, 3102712 - 3102804
Alignment:
Q  72 taattattttaaaataaaacaatgacgtgtcatattttaatttgttgtttgtaagaatgatatgttaggttcgttcctacacaagaatttctc 164  Q
    |||||||||||||| ||||||| |||||||||| ||||||||||||||||||||| |||||| ||||||||||||||||||||||||||||||    
T  3102712 taattattttaaaaaaaaacaacgacgtgtcatgttttaatttgttgtttgtaaggatgataggttaggttcgttcctacacaagaatttctc 3102804  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 73; E-Value: 3e-33
Query Start/End: Original strand, 72 - 164
Target Start/End: Original strand, 40534135 - 40534227
Alignment:
Q  72 taattattttaaaataaaacaatgacgtgtcatattttaatttgttgtttgtaagaatgatatgttaggttcgttcctacacaagaatttctc 164  Q
    |||||||||||||| ||||||| |||||||||| ||||||||||||||||||||| |||||| ||||||||||||||||||||||||||||||    
T  40534135 taattattttaaaagaaaacaacgacgtgtcatgttttaatttgttgtttgtaaggatgataggttaggttcgttcctacacaagaatttctc 40534227  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 71; E-Value: 5e-32
Query Start/End: Original strand, 79 - 165
Target Start/End: Original strand, 18381488 - 18381574
Alignment:
Q  79 tttaaaataaaacaatgacgtgtcatattttaatttgttgtttgtaagaatgatatgttaggttcgttcctacacaagaatttctct 165  Q
    |||||||||||||||||| ||||||| ||||||||||||| |||||||||||| |||||||||||||||||||||||||||||||||    
T  18381488 tttaaaataaaacaatgatgtgtcatgttttaatttgttgcttgtaagaatgaaatgttaggttcgttcctacacaagaatttctct 18381574  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 87 - 165
Target Start/End: Complemental strand, 40534040 - 40533962
Alignment:
Q  87 aaaacaatgacgtgtcatattttaatttgttgtttgtaagaatgatatgttaggttcgttcctacacaagaatttctct 165  Q
    ||||||| ||||| |||| |||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||    
T  40534040 aaaacaacgacgtatcatgttttaatttgttgtttgtaagaatgataggttaggttcgttcctacacaagaatttctct 40533962  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 61; E-Value: 5e-26
Query Start/End: Original strand, 93 - 165
Target Start/End: Original strand, 5121000 - 5121072
Alignment:
Q  93 atgacgtgtcatattttaatttgttgtttgtaagaatgatatgttaggttcgttcctacacaagaatttctct 165  Q
    |||| ||||||| ||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||    
T  5121000 atgatgtgtcatgttttaatttgttgtttgtaagaatgatatgttaggtttgttcctacacaagaatttctct 5121072  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 87 - 174
Target Start/End: Complemental strand, 3102617 - 3102530
Alignment:
Q  87 aaaacaatgacgtgtcatattttaatttgttgtttgtaagaatgatatgttaggttcgttcctacacaagaatttctctataacttat 174  Q
    ||||||| ||||| |||| ||||||||||||||||||||| |||||| ||||||||||||||||||||||||||||||| ||| ||||    
T  3102617 aaaacaacgacgtatcatgttttaatttgttgtttgtaaggatgataggttaggttcgttcctacacaagaatttctctttaatttat 3102530  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 87 - 168
Target Start/End: Complemental strand, 13690292 - 13690211
Alignment:
Q  87 aaaacaatgacgtgtcatattttaatttgttgtttgtaagaatgatatgttaggttcgttcctacacaagaatttctctata 168  Q
    ||||||| ||||| |||| ||||||||||||||||||||| |||||| ||||||||||||||||||||||||||||| ||||    
T  13690292 aaaacaacgacgtatcatgttttaatttgttgtttgtaaggatgataggttaggttcgttcctacacaagaatttctttata 13690211  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 87 - 164
Target Start/End: Complemental strand, 9231657 - 9231580
Alignment:
Q  87 aaaacaatgacgtgtcatattttaatttgttgtttgtaagaatgatatgttaggttcgttcctacacaagaatttctc 164  Q
    ||||||| |||||||||| ||||||||||||||||||||| ||| || | ||||||||||||||||||||||||||||    
T  9231657 aaaacaacgacgtgtcatgttttaatttgttgtttgtaaggatggtaggctaggttcgttcctacacaagaatttctc 9231580  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 87 - 165
Target Start/End: Complemental strand, 18936752 - 18936675
Alignment:
Q  87 aaaacaatgacgtgtcatattttaatttgttgtttgtaagaatgatatgttaggttcgttcctacacaagaatttctct 165  Q
    |||| |||||||| |||| |||||||||||||||||||||||||||| |||| |||||||| |||||||||||||||||    
T  18936752 aaaaaaatgacgtatcatgttttaatttgttgtttgtaagaatgata-gttatgttcgttcatacacaagaatttctct 18936675  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 72 - 145
Target Start/End: Original strand, 9231752 - 9231825
Alignment:
Q  72 taattattttaaaataaaacaatgacgtgtcatattttaatttgttgtttgtaagaatgatatgttaggttcgt 145  Q
    |||||||||||||| ||||||| |||||  ||| ||||||||||||||||||||| |||||| |||||||||||    
T  9231752 taattattttaaaagaaaacaacgacgtagcatgttttaatttgttgtttgtaaggatgataggttaggttcgt 9231825  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 348 - 417
Target Start/End: Original strand, 50630787 - 50630856
Alignment:
Q  348 caagcaagagagagacgccacacttacccaaaaccttaaggaaataggtttatgggtcctcttacttata 417  Q
    ||||||||||||| ||  ||| ||||||||||||||||||| ||| ||||||||||||||||||||||||    
T  50630787 caagcaagagagacaccacactcttacccaaaaccttaaggcaatgggtttatgggtcctcttacttata 50630856  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 355 - 428
Target Start/End: Original strand, 22027998 - 22028073
Alignment:
Q  355 gagagagacgccaca--cttacccaaaaccttaaggaaataggtttatgggtcctcttacttatagggtattcaac 428  Q
    ||||||||| |||||  ||||||||||||||||||| |||| ||||||||||||||||||||||| ||| ||||||    
T  22027998 gagagagacaccacattcttacccaaaaccttaaggcaatatgtttatgggtcctcttacttataaggtgttcaac 22028073  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 348 - 417
Target Start/End: Complemental strand, 31691278 - 31691207
Alignment:
Q  348 caagcaagagagagacgccacact--tacccaaaaccttaaggaaataggtttatgggtcctcttacttata 417  Q
    ||||||||||| ||||||||||||  ||||||||||||||||| |||  |||||||||||||||||||||||    
T  31691278 caagcaagagatagacgccacactcttacccaaaaccttaaggcaatgagtttatgggtcctcttacttata 31691207  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 348 - 428
Target Start/End: Complemental strand, 41370481 - 41370401
Alignment:
Q  348 caagcaagagagagacgccacacttacccaaaaccttaaggaaataggtttatgggtcctcttacttatagggtattcaac 428  Q
    ||||||||||||| ||  ||| |||||||||||| |||||| ||| |||||||||||||||||||||||| ||| ||||||    
T  41370481 caagcaagagagacactacactcttacccaaaactttaaggcaatgggtttatgggtcctcttacttataaggttttcaac 41370401  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 356 - 428
Target Start/End: Original strand, 4955355 - 4955429
Alignment:
Q  356 agagagacgccacact--tacccaaaaccttaaggaaataggtttatgggtcctcttacttatagggtattcaac 428  Q
    ||||||||||||||||  ||||||||||||||||| ||| |||||||| ||||||||||||||| ||| ||||||    
T  4955355 agagagacgccacactcttacccaaaaccttaaggcaatgggtttatgagtcctcttacttataaggtgttcaac 4955429  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 348 - 417
Target Start/End: Complemental strand, 25483460 - 25483391
Alignment:
Q  348 caagcaagagagagacgccacacttacccaaaaccttaaggaaataggtttatgggtcctcttacttata 417  Q
    ||||||||||||| ||  ||| ||||||||||||||||||| ||| ||||||||| ||||||||||||||    
T  25483460 caagcaagagagacaccacactcttacccaaaaccttaaggcaatgggtttatggatcctcttacttata 25483391  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 348 - 417
Target Start/End: Complemental strand, 36629361 - 36629292
Alignment:
Q  348 caagcaagagagagacgccacacttacccaaaaccttaaggaaataggtttatgggtcctcttacttata 417  Q
    ||||||||||||| ||  ||| ||||||||||||||||||| |||  |||||||||||||||||||||||    
T  36629361 caagcaagagagacaccacactcttacccaaaaccttaaggcaatgagtttatgggtcctcttacttata 36629292  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 370 - 426
Target Start/End: Complemental strand, 18879908 - 18879852
Alignment:
Q  370 cttacccaaaaccttaaggaaataggtttatgggtcctcttacttatagggtattca 426  Q
    ||||||||||||||||||||||||||||||| |||| ||||||||||| ||| ||||    
T  18879908 cttacccaaaaccttaaggaaataggtttataggtcatcttacttataaggtgttca 18879852  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 348 - 428
Target Start/End: Original strand, 18932781 - 18932861
Alignment:
Q  348 caagcaagagagagacgccacacttacccaaaaccttaaggaaataggtttatgggtcctcttacttatagggtattcaac 428  Q
    |||| |||||||| ||  ||| |||||| |||||||||||| ||| |||||||||||||||||| ||||| ||||||||||    
T  18932781 caagtaagagagacaccacactcttacctaaaaccttaaggcaatgggtttatgggtcctcttatttataaggtattcaac 18932861  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 348 - 428
Target Start/End: Complemental strand, 54109036 - 54108957
Alignment:
Q  348 caagcaagagagagacgccacacttacccaaaaccttaaggaaataggtttatgggtcctcttacttatagggtattcaac 428  Q
    ||||||||||||| ||  ||| |||||||||||| |||||| ||| |||||||||||||||||||||||| ||| ||||||    
T  54109036 caagcaagagagacaccacactcttacccaaaac-ttaaggcaatgggtttatgggtcctcttacttataaggtgttcaac 54108957  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 355 - 428
Target Start/End: Complemental strand, 54936315 - 54936240
Alignment:
Q  355 gagagagacgccacact--tacccaaaaccttaaggaaataggtttatgggtcctcttacttatagggtattcaac 428  Q
    ||||||||| |||||||  ||||||||||||||||| ||| |||||||||||||||||||||| | ||| ||||||    
T  54936315 gagagagacaccacactcttacccaaaaccttaaggcaatgggtttatgggtcctcttacttacaaggtgttcaac 54936240  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 348 - 428
Target Start/End: Original strand, 55933156 - 55933236
Alignment:
Q  348 caagcaagagagagacgccacacttacccaaaaccttaaggaaataggtttatgggtcctcttacttatagggtattcaac 428  Q
    |||| |||||||| ||  ||| |||||||||||| |||||| ||| |||||||||||||||||||||||| ||| ||||||    
T  55933156 caagtaagagagacaccacactcttacccaaaactttaaggcaatgggtttatgggtcctcttacttataaggtgttcaac 55933236  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 370 - 417
Target Start/End: Complemental strand, 3271889 - 3271842
Alignment:
Q  370 cttacccaaaaccttaaggaaataggtttatgggtcctcttacttata 417  Q
    ||||||||||||||||||| ||||||||||||||| ||||||||||||    
T  3271889 cttacccaaaaccttaaggcaataggtttatgggttctcttacttata 3271842  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 370 - 428
Target Start/End: Complemental strand, 2741173 - 2741115
Alignment:
Q  370 cttacccaaaaccttaaggaaataggtttatgggtcctcttacttatagggtattcaac 428  Q
    ||||||||||||||||||| ||| |  ||||||||||||||||||||| ||||||||||    
T  2741173 cttacccaaaaccttaaggcaatggagttatgggtcctcttacttataaggtattcaac 2741115  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 87 - 161
Target Start/End: Original strand, 11147212 - 11147285
Alignment:
Q  87 aaaacaatgacgtgtcatattttaatttgttgtttgtaagaatgatatgttaggttcgttcctacacaagaattt 161  Q
    |||| |||||| |||||||||||||||| |||||||||||||| ||| ||||| |||||| ||||| ||||||||    
T  11147212 aaaaaaatgacatgtcatattttaatttattgtttgtaagaataata-gttagattcgtttctacataagaattt 11147285  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 370 - 428
Target Start/End: Complemental strand, 49880262 - 49880204
Alignment:
Q  370 cttacccaaaaccttaaggaaataggtttatgggtcctcttacttatagggtattcaac 428  Q
    ||||||||||||||||||| | | |||||||||||||||||||||||| ||| ||||||    
T  49880262 cttacccaaaaccttaaggcagtgggtttatgggtcctcttacttataaggtgttcaac 49880204  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 348 - 417
Target Start/End: Original strand, 1731679 - 1731748
Alignment:
Q  348 caagcaagagagagacgccacacttacccaaaaccttaaggaaataggtttatgggtcctcttacttata 417  Q
    ||||||||||| | ||  ||| ||||||||||||||||||| ||| |||||||||||||||||| |||||    
T  1731679 caagcaagagaaacaccacactcttacccaaaaccttaaggcaattggtttatgggtcctcttatttata 1731748  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 348 - 417
Target Start/End: Complemental strand, 3340931 - 3340862
Alignment:
Q  348 caagcaagagagagacgccacacttacccaaaaccttaaggaaataggtttatgggtcctcttacttata 417  Q
    ||||||||| ||| ||  ||| ||||||||||||||||||| | | ||||||||||||||||||||||||    
T  3340931 caagcaagaaagacaccacactcttacccaaaaccttaaggcagtgggtttatgggtcctcttacttata 3340862  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 326 - 428
Target Start/End: Original strand, 16889550 - 16889648
Alignment:
Q  326 gaggttagaacaatcacacaagcaagcaagagagagacgccacacttacccaaaaccttaaggaaataggtttatgggtcctcttacttatagggtattc 425  Q
    |||||||||||||||||||||| |||    ||||| ||   || |||||||||||| |||||| | ||||||||||  |||||||||||||| |||||||    
T  16889550 gaggttagaacaatcacacaaggaag----agagacaccatactcttacccaaaactttaaggcagtaggtttatgaatcctcttacttataaggtattc 16889645  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 355 - 417
Target Start/End: Original strand, 22183301 - 22183365
Alignment:
Q  355 gagagagacgccacact--tacccaaaaccttaaggaaataggtttatgggtcctcttacttata 417  Q
    |||||||||||||||||  || |||||||||||||| ||| |||||||||||||| |||||||||    
T  22183301 gagagagacgccacactcttatccaaaaccttaaggcaatgggtttatgggtccttttacttata 22183365  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 348 - 417
Target Start/End: Complemental strand, 39404522 - 39404453
Alignment:
Q  348 caagcaagagagagacgccacacttacccaaaaccttaaggaaataggtttatgggtcctcttacttata 417  Q
    ||||||||||||| ||  ||  ||| |||||||||||||||  |||||||||||||||||||||||||||    
T  39404522 caagcaagagagacaccacattcttgcccaaaaccttaaggctataggtttatgggtcctcttacttata 39404453  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 348 - 417
Target Start/End: Complemental strand, 44620783 - 44620715
Alignment:
Q  348 caagcaagagagagacgccacacttacccaaaaccttaaggaaataggtttatgggtcctcttacttata 417  Q
    ||||||||||||| ||  ||| |||||||||||||||||||  || ||||||||||||||||||||||||    
T  44620783 caagcaagagagaaaccacactcttacccaaaaccttaaggttat-ggtttatgggtcctcttacttata 44620715  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 348 - 428
Target Start/End: Complemental strand, 45496929 - 45496849
Alignment:
Q  348 caagcaagagagagacgccacacttacccaaaaccttaaggaaataggtttatgggtcctcttacttatagggtattcaac 428  Q
    ||||||||||||| ||  ||| ||||||||||||||||||  |||  |||||| |||||||||||||||| ||| ||||||    
T  45496929 caagcaagagagacaccacactcttacccaaaaccttaagacaatgagtttataggtcctcttacttataaggtgttcaac 45496849  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 370 - 414
Target Start/End: Complemental strand, 49303008 - 49302964
Alignment:
Q  370 cttacccaaaaccttaaggaaataggtttatgggtcctcttactt 414  Q
    ||||||||||||||||||| ||| |||||||||||||||||||||    
T  49303008 cttacccaaaaccttaaggcaatgggtttatgggtcctcttactt 49302964  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 349 - 417
Target Start/End: Original strand, 54017628 - 54017696
Alignment:
Q  349 aagcaagagagagacgccacacttacccaaaaccttaaggaaataggtttatgggtcctcttacttata 417  Q
    |||||||||||| |   ||| |||||| |||||||||||| ||| ||||||||||||||||||||||||    
T  54017628 aagcaagagagacatcacactcttacctaaaaccttaaggcaatgggtttatgggtcctcttacttata 54017696  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 356 - 428
Target Start/End: Complemental strand, 43174625 - 43174551
Alignment:
Q  356 agagagacgccacact--tacccaaaaccttaaggaaataggtttatgggtcctcttacttatagggtattcaac 428  Q
    ||||||||||||||||  ||||||| || ||||||  ||||||||||| ||||||||||||||| ||| ||||||    
T  43174625 agagagacgccacactcttacccaacactttaaggtcataggtttatgtgtcctcttacttataaggtgttcaac 43174551  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 353 - 428
Target Start/End: Complemental strand, 52885009 - 52884931
Alignment:
Q  353 aagagagagacgccaca--cttaccc-aaaaccttaaggaaataggtttatgggtcctcttacttatagggtattcaac 428  Q
    ||||||||||| |||||  ||||||| |||||||||||| ||| ||||||||| |||||||||||||| ||| ||||||    
T  52885009 aagagagagacaccacattcttaccccaaaaccttaaggcaatgggtttatggatcctcttacttataaggtgttcaac 52884931  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 99 - 165
Target Start/End: Complemental strand, 37177688 - 37177623
Alignment:
Q  99 tgtcatattttaatttgttgtttgtaagaatgatatgttaggttcgttcctacacaagaatttctct 165  Q
    |||||||||||||||| ||||||||||||||||||  ||   |||||||||||| ||||||||||||    
T  37177688 tgtcatattttaatttattgtttgtaagaatgata-attgaattcgttcctacagaagaatttctct 37177623  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 348 - 428
Target Start/End: Original strand, 22028401 - 22028481
Alignment:
Q  348 caagcaagagagagacgccacacttacccaaaaccttaaggaaataggtttatgggtcctcttacttatagggtattcaac 428  Q
    ||||||||||||| ||  ||| |||||||||||| |||||  |||  ||||||||||||||||||| ||| ||| ||||||    
T  22028401 caagcaagagagacaccacactcttacccaaaacattaagacaatgagtttatgggtcctcttactaataaggtgttcaac 22028481  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 348 - 428
Target Start/End: Original strand, 39792892 - 39792972
Alignment:
Q  348 caagcaagagagagacgccacacttacccaaaaccttaaggaaataggtttatgggtcctcttacttatagggtattcaac 428  Q
    ||||||||||||| ||  ||| ||||||||||||||||||| |||  ||||| || ||||||| |||||| ||| ||||||    
T  39792892 caagcaagagagacaccacactcttacccaaaaccttaaggcaatgagtttacggttcctctttcttataaggtgttcaac 39792972  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 356 - 428
Target Start/End: Original strand, 6975494 - 6975568
Alignment:
Q  356 agagagacgccaca--cttacccaaaaccttaaggaaataggtttatgggtcctcttacttatagggtattcaac 428  Q
    ||||||||||||||  ||||||||||| ||||||  ||| | |||||| ||||||||||||||| | ||||||||    
T  6975494 agagagacgccacactcttacccaaaatcttaagataatggatttatgagtcctcttacttataagatattcaac 6975568  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 350 - 417
Target Start/End: Original strand, 23817715 - 23817782
Alignment:
Q  350 agcaagagagagacgccacacttacccaaaaccttaaggaaataggtttatgggtcctcttacttata 417  Q
    ||||||||||| ||  ||| ||||||||||||||||||| |||  |||||||  ||||||||||||||    
T  23817715 agcaagagagacaccacactcttacccaaaaccttaaggcaatgagtttatgaatcctcttacttata 23817782  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 356 - 428
Target Start/End: Original strand, 34646687 - 34646761
Alignment:
Q  356 agagagacgccacact--tacccaaaaccttaaggaaataggtttatgggtcctcttacttatagggtattcaac 428  Q
    |||||||| |||||||  ||||||||||||||||| |||  ||||||| ||||||||| ||||| ||| ||||||    
T  34646687 agagagacaccacactcttacccaaaaccttaaggcaatgagtttatgagtcctcttagttataaggtgttcaac 34646761  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 373 - 428
Target Start/End: Complemental strand, 36572118 - 36572063
Alignment:
Q  373 acccaaaaccttaaggaaataggtttatgggtcctcttacttatagggtattcaac 428  Q
    |||||||||||||||| ||| | |||||||||| ||||||||||| ||| ||||||    
T  36572118 acccaaaaccttaaggcaatggatttatgggtcttcttacttataaggtgttcaac 36572063  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 348 - 415
Target Start/End: Complemental strand, 50002550 - 50002483
Alignment:
Q  348 caagcaagagagagacgccacacttacccaaaaccttaaggaaataggtttatgggtcctcttactta 415  Q
    |||| |||||||| ||  ||| ||||||||||||||||||  ||| | ||||||||||||||||||||    
T  50002550 caagtaagagagacaccacactcttacccaaaaccttaagacaatggatttatgggtcctcttactta 50002483  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 370 - 428
Target Start/End: Complemental strand, 20825938 - 20825880
Alignment:
Q  370 cttacccaaaaccttaaggaaataggtttatgggtcctcttacttatagggtattcaac 428  Q
    |||||||||||||||||||  | |||||||||||| |||||| ||||| ||| ||||||    
T  20825938 cttacccaaaaccttaaggctaaaggtttatgggtgctcttatttataaggtgttcaac 20825880  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 370 - 428
Target Start/End: Complemental strand, 44620455 - 44620397
Alignment:
Q  370 cttacccaaaaccttaaggaaataggtttatgggtcctcttacttatagggtattcaac 428  Q
    ||||||||||||||||||| ||| ||||||||||  |||||| ||||| ||| ||||||    
T  44620455 cttacccaaaaccttaaggcaatgggtttatgggctctcttatttataaggtgttcaac 44620397  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 354 - 428
Target Start/End: Original strand, 54741216 - 54741290
Alignment:
Q  354 agagagagacgccacacttacccaaaaccttaaggaaataggtttatgggtcctcttacttatagggtattcaac 428  Q
    ||||||||||  ||| |||| |||||||||||||  |||  || |||||||||||||||||||| ||| ||||||    
T  54741216 agagagagactacactcttatccaaaaccttaagacaatctgtgtatgggtcctcttacttataaggtgttcaac 54741290  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #52
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 373 - 426
Target Start/End: Original strand, 2891879 - 2891932
Alignment:
Q  373 acccaaaaccttaaggaaataggtttatgggtcctcttacttatagggtattca 426  Q
    |||||||||||||||  | ||||||||||| ||||||||||||||  |||||||    
T  2891879 acccaaaaccttaagacattaggtttatggatcctcttacttataaagtattca 2891932  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #53
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 355 - 417
Target Start/End: Original strand, 3244488 - 3244552
Alignment:
Q  355 gagagagacgccaca--cttacccaaaaccttaaggaaataggtttatgggtcctcttacttata 417  Q
    |||||||||| ||||  |||||||||||| |||||  |||  |||||||||||||||||||||||    
T  3244488 gagagagacgacacattcttacccaaaactttaagacaatgagtttatgggtcctcttacttata 3244552  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #54
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 360 - 410
Target Start/End: Complemental strand, 19504810 - 19504758
Alignment:
Q  360 agacgccacact--tacccaaaaccttaaggaaataggtttatgggtcctctt 410  Q
    ||||||||||||  |||||||||| |||||| ||||| |||||||||||||||    
T  19504810 agacgccacactcttacccaaaactttaaggcaatagatttatgggtcctctt 19504758  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #55
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 355 - 417
Target Start/End: Complemental strand, 28034348 - 28034284
Alignment:
Q  355 gagagagacgccaca--cttacccaaaaccttaaggaaataggtttatgggtcctcttacttata 417  Q
    |||||||||||||||  |||||| |||||||||| | |||| |||||||||| |||| |||||||    
T  28034348 gagagagacgccacactcttacctaaaaccttaaagcaataagtttatgggttctctcacttata 28034284  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #56
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 348 - 417
Target Start/End: Complemental strand, 50459845 - 50459776
Alignment:
Q  348 caagcaagagagagacgccacacttacccaaaaccttaaggaaataggtttatgggtcctcttacttata 417  Q
    ||||||||||||| ||  | | |||||| |||||||||||  ||| |||||||| |||||||||||||||    
T  50459845 caagcaagagagacaccacgctcttacctaaaaccttaagataatgggtttatgagtcctcttacttata 50459776  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #57
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 348 - 428
Target Start/End: Complemental strand, 52884820 - 52884739
Alignment:
Q  348 caagcaagagagagacgccacacttaccc-aaaaccttaaggaaataggtttatgggtcctcttacttatagggtattcaac 428  Q
    ||||||||||||| ||  ||| ||||||| |||||||||||| ||| ||||||| | || ||||||||||| ||| ||||||    
T  52884820 caagcaagagagacaccacactcttaccccaaaaccttaaggcaatgggtttatcgatcatcttacttataaggtgttcaac 52884739  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #58
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 355 - 428
Target Start/End: Complemental strand, 2740819 - 2740744
Alignment:
Q  355 gagagagacgccacact--tacccaaaaccttaaggaaataggtttatgggtcctcttacttatagggtattcaac 428  Q
    |||||||||||||||||  |||  ||||||||||||   | ||||||| |||||||||||||||| ||| ||||||    
T  2740819 gagagagacgccacactcttacgtaaaaccttaaggctctgggtttataggtcctcttacttataaggtgttcaac 2740744  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #59
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 348 - 428
Target Start/End: Complemental strand, 10246043 - 10245964
Alignment:
Q  348 caagcaagagagagacgccacacttacccaaaaccttaaggaaataggtttatgggtcctcttacttatagggtattcaac 428  Q
    |||||||| |||| ||  ||| |||||||||||||||||||   | ||||||| |||||||||||||||| ||| ||||||    
T  10246043 caagcaagggagacaccacactcttacccaaaaccttaaggctttgggtttat-ggtcctcttacttataaggtgttcaac 10245964  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #60
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 355 - 416
Target Start/End: Original strand, 36608698 - 36608761
Alignment:
Q  355 gagagagacgccacact--tacccaaaaccttaaggaaataggtttatgggtcctcttacttat 416  Q
    ||||||||| |||||||  ||||||||||||||||  ||| | ||||||| |||||||||||||    
T  36608698 gagagagacaccacactcttacccaaaaccttaagacaatggatttatggatcctcttacttat 36608761  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #61
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 356 - 417
Target Start/End: Complemental strand, 39404136 - 39404073
Alignment:
Q  356 agagagacgccacact--tacccaaaaccttaaggaaataggtttatgggtcctcttacttata 417  Q
    ||||||||||||||||  ||||||||||||||| |  ||  ||||||| |||||||||||||||    
T  39404136 agagagacgccacactcttacccaaaaccttaatgctatgagtttatgagtcctcttacttata 39404073  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #62
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 348 - 428
Target Start/End: Complemental strand, 44621126 - 44621046
Alignment:
Q  348 caagcaagagagagacgccacacttacccaaaaccttaaggaaataggtttatgggtcctcttacttatagggtattcaac 428  Q
    ||||||||||| | ||  ||| ||||||||||||||||||  |||  ||||||| | ||||||||||||| ||| ||||||    
T  44621126 caagcaagagaaacaccacactcttacccaaaaccttaagacaatgagtttatgtgccctcttacttataaggtgttcaac 44621046  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 121; Significance: 7e-62; HSPs: 59)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 121; E-Value: 7e-62
Query Start/End: Original strand, 16 - 164
Target Start/End: Original strand, 38086083 - 38086231
Alignment:
Q  16 aaataatggttgagagagaggaagagcagttatttttcatttcttaaattatttcctaattattttaaaataaaacaatgacgtgtcatattttaatttg 115  Q
    |||||||||||||||||||||| ||||||||||||||||||||||||||||||||  ||||||||||||||||||||||||||| |||||||||||||||    
T  38086083 aaataatggttgagagagaggaggagcagttatttttcatttcttaaattatttcaaaattattttaaaataaaacaatgacgtatcatattttaatttg 38086182  T
Q  116 ttgtttgtaagaatgatatgttaggttcgttcctacacaagaatttctc 164  Q
    ||||||||||||||||||||||||||| || ||||||||| ||||||||    
T  38086183 ttgtttgtaagaatgatatgttaggtttgtccctacacaaaaatttctc 38086231  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 118; E-Value: 5e-60
Query Start/End: Original strand, 15 - 164
Target Start/End: Complemental strand, 31470735 - 31470587
Alignment:
Q  15 aaaataatggttgagagagaggaagagcagttatttttcatttcttaaattatttcctaattattttaaaataaaacaatgacgtgtcatattttaattt 114  Q
    |||| ||||||||||||||||||  |||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||    
T  31470735 aaaacaatggttgagagagaggagaagcaattatttttcatttcttaaattatttcctaattattttaaaataaaacaatgacgtgtcatgttttaattt 31470636  T
Q  115 gttgtttgtaagaatgatatgttaggttcgttcctacacaagaatttctc 164  Q
    ||||||||||| ||||||| ||||||||||||||||||||||||||||||    
T  31470635 gttgtttgtaaaaatgata-gttaggttcgttcctacacaagaatttctc 31470587  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 113; E-Value: 4e-57
Query Start/End: Original strand, 16 - 164
Target Start/End: Original strand, 3671939 - 3672087
Alignment:
Q  16 aaataatggttgagagagaggaagagcagttatttttcatttcttaaattatttcctaattattttaaaataaaacaatgacgtgtcatattttaatttg 115  Q
    |||||||||||||||||||||| ||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||| |||||||||||||    
T  3671939 aaataatggttgagagagaggaggagcagttatttttcatttcttaaattatttccaaattattttaaaataaaacaatgacgtgttatattttaatttg 3672038  T
Q  116 ttgtttgtaagaatgatatgttaggttcgttcctacacaagaatttctc 164  Q
    || ||||||| |||||||| |||| ||||||||| || |||||||||||    
T  3672039 ttatttgtaaaaatgatatattagattcgttcctccataagaatttctc 3672087  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 72 - 164
Target Start/End: Complemental strand, 42028670 - 42028578
Alignment:
Q  72 taattattttaaaataaaacaatgacgtgtcatattttaatttgttgtttgtaagaatgatatgttaggttcgttcctacacaagaatttctc 164  Q
    |||||||||||||| ||||||| |||||||||| |||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||    
T  42028670 taattattttaaaagaaaacaacgacgtgtcatgttttaatttgttgtttgtaagaatgataggttaggttcgttcctacacaagaatttctc 42028578  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 76; E-Value: 5e-35
Query Start/End: Original strand, 82 - 165
Target Start/End: Original strand, 15332844 - 15332927
Alignment:
Q  82 aaaataaaacaatgacgtgtcatattttaatttgttgtttgtaagaatgatatgttaggttcgttcctacacaagaatttctct 165  Q
    ||||||||||||||||||||||| ||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||    
T  15332844 aaaataaaacaatgacgtgtcatgttttaatttattgtttgtaagaatgatatgttaggttcgttcctacacaagaatttctct 15332927  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 71; E-Value: 5e-32
Query Start/End: Original strand, 72 - 166
Target Start/End: Original strand, 2059656 - 2059750
Alignment:
Q  72 taattattttaaaataaaacaatgacgtgtcatattttaatttgttgtttgtaagaatgatatgttaggttcgttcctacacaagaatttctcta 166  Q
    |||||||||||||| ||||||| |||||||||||||||||||||||||||||||| |||||| |||||||||||||| |||||| ||||||||||    
T  2059656 taattattttaaaagaaaacaacgacgtgtcatattttaatttgttgtttgtaaggatgataggttaggttcgttccaacacaataatttctcta 2059750  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 72 - 165
Target Start/End: Original strand, 13280007 - 13280100
Alignment:
Q  72 taattattttaaaataaaacaatgacgtgtcatattttaatttgttgtttgtaagaatgatatgttaggttcgttcctacacaagaatttctct 165  Q
    |||||||||||||| ||||||| ||||| |||| ||||||||||||||||||||| |||||| |||||||||||||||||||||||||||||||    
T  13280007 taattattttaaaagaaaacaacgacgtatcatgttttaatttgttgtttgtaaggatgataggttaggttcgttcctacacaagaatttctct 13280100  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 69; E-Value: 8e-31
Query Start/End: Original strand, 72 - 164
Target Start/End: Complemental strand, 16115138 - 16115046
Alignment:
Q  72 taattattttaaaataaaacaatgacgtgtcatattttaatttgttgtttgtaagaatgatatgttaggttcgttcctacacaagaatttctc 164  Q
    |||||||||||||| ||||||| |||||||||||||||||||||||||||||||| |||||| ||||||||||||| ||||||| ||||||||    
T  16115138 taattattttaaaagaaaacaacgacgtgtcatattttaatttgttgtttgtaaggatgataggttaggttcgttcttacacaaaaatttctc 16115046  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 66; E-Value: 5e-29
Query Start/End: Original strand, 72 - 165
Target Start/End: Original strand, 31860257 - 31860350
Alignment:
Q  72 taattattttaaaataaaacaatgacgtgtcatattttaatttgttgtttgtaagaatgatatgttaggttcgttcctacacaagaatttctct 165  Q
    |||||||||||||| ||||||| || ||||||| ||||||||||||||||||||| ||| || |||||||||||||||||||||||||||||||    
T  31860257 taattattttaaaagaaaacaacgatgtgtcatgttttaatttgttgtttgtaaggatggtaggttaggttcgttcctacacaagaatttctct 31860350  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 95 - 165
Target Start/End: Original strand, 36059282 - 36059352
Alignment:
Q  95 gacgtgtcatattttaatttgttgtttgtaagaatgatatgttaggttcgttcctacacaagaatttctct 165  Q
    |||||||||| ||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||    
T  36059282 gacgtgtcatgttttaatttgttgtttgtaaggatgatatgttaggttcgttcctacacaagaatttctct 36059352  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 87 - 164
Target Start/End: Original strand, 16115231 - 16115308
Alignment:
Q  87 aaaacaatgacgtgtcatattttaatttgttgtttgtaagaatgatatgttaggttcgttcctacacaagaatttctc 164  Q
    |||||||||| ||||||||||||| |||||||||||||||||||||| ||||||||||||||||||||| ||||||||    
T  16115231 aaaacaatgaagtgtcatattttagtttgttgtttgtaagaatgataggttaggttcgttcctacacaaaaatttctc 16115308  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 87 - 170
Target Start/End: Complemental strand, 31860156 - 31860073
Alignment:
Q  87 aaaacaatgacgtgtcatattttaatttgttgtttgtaagaatgatatgttaggttcgttcctacacaagaatttctctataac 170  Q
    |||| ||||||||||||| |||||||||||||||| |||| |||||| |||||||||||||||||||||||||||||| |||||    
T  31860156 aaaataatgacgtgtcatgttttaatttgttgtttataaggatgataggttaggttcgttcctacacaagaatttctcgataac 31860073  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 59; E-Value: 7e-25
Query Start/End: Original strand, 16 - 85
Target Start/End: Original strand, 15330516 - 15330586
Alignment:
Q  16 aaataatggttgagagagaggaagagcagtt-atttttcatttcttaaattatttcctaattattttaaaa 85  Q
    |||||||||||||||||||||| |||||||| |||||||||||||||||||||||||||||||||||||||    
T  15330516 aaataatggttgagagagaggaggagcagtttatttttcatttcttaaattatttcctaattattttaaaa 15330586  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 59; E-Value: 7e-25
Query Start/End: Original strand, 87 - 169
Target Start/End: Original strand, 42028765 - 42028847
Alignment:
Q  87 aaaacaatgacgtgtcatattttaatttgttgtttgtaagaatgatatgttaggttcgttcctacacaagaatttctctataa 169  Q
    ||||||| ||||| |||| ||||||||||||||||||||| |||||| |||||||||||||||||||||||||||||| ||||    
T  42028765 aaaacaacgacgtatcatgttttaatttgttgtttgtaaggatgataggttaggttcgttcctacacaagaatttctcaataa 42028847  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 87 - 164
Target Start/End: Complemental strand, 2059567 - 2059490
Alignment:
Q  87 aaaacaatgacgtgtcatattttaatttgttgtttgtaagaatgatatgttaggttcgttcctacacaagaatttctc 164  Q
    |||||||||| ||||||||||||| ||||||||||||||| |||||| ||||||||||||||||| ||||||||||||    
T  2059567 aaaacaatgaagtgtcatattttagtttgttgtttgtaaggatgataggttaggttcgttcctacccaagaatttctc 2059490  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 72 - 165
Target Start/End: Original strand, 7317807 - 7317900
Alignment:
Q  72 taattattttaaaataaaacaatgacgtgtcatattttaatttgttgtttgtaagaatgatatgttaggttcgttcctacacaagaatttctct 165  Q
    |||||||||||||| |||| ||  | ||||||| ||||||||| ||||||||||| |||||| |||||||||||||||||||||||||||||||    
T  7317807 taattattttaaaagaaaaaaacaatgtgtcatgttttaatttattgtttgtaaggatgataggttaggttcgttcctacacaagaatttctct 7317900  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 87 - 163
Target Start/End: Complemental strand, 3671897 - 3671822
Alignment:
Q  87 aaaacaatgacgtgtcatattttaatttgttgtttgtaagaatgatatgttaggttcgttcctacacaagaatttct 163  Q
    |||| ||||| ||||||| |||||||||||||||||||||||||||| |||||||||||||||||||||||||||||    
T  3671897 aaaaaaatgatgtgtcatgttttaatttgttgtttgtaagaatgata-gttaggttcgttcctacacaagaatttct 3671822  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 95 - 164
Target Start/End: Complemental strand, 38086035 - 38085967
Alignment:
Q  95 gacgtgtcatattttaatttgttgtttgtaagaatgatatgttaggttcgttcctacacaagaatttctc 164  Q
    |||||||||| |||||||||||||||||||||||||||| ||||| ||||||||||||||||||||||||    
T  38086035 gacgtgtcatgttttaatttgttgtttgtaagaatgata-gttagtttcgttcctacacaagaatttctc 38085967  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 87 - 164
Target Start/End: Original strand, 31470765 - 31470841
Alignment:
Q  87 aaaacaatgacgtgtcatattttaatttgttgtttgtaagaatgatatgttaggttcgttcctacacaagaatttctc 164  Q
    |||| ||||| |||||||  ||||||||||||||||||||||||||| ||||||||||||||||||||| ||||||||    
T  31470765 aaaaaaatgatgtgtcattatttaatttgttgtttgtaagaatgata-gttaggttcgttcctacacaaaaatttctc 31470841  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 348 - 428
Target Start/End: Original strand, 5542659 - 5542739
Alignment:
Q  348 caagcaagagagagacgccacacttacccaaaaccttaaggaaataggtttatgggtcctcttacttatagggtattcaac 428  Q
    ||||||||||||| ||  ||| |||||| |||||||||||| |||||||||||||||||||||||||||| ||| ||||||    
T  5542659 caagcaagagagacaccacactcttaccaaaaaccttaaggcaataggtttatgggtcctcttacttataaggtgttcaac 5542739  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 348 - 428
Target Start/End: Original strand, 36178639 - 36178719
Alignment:
Q  348 caagcaagagagagacgccacacttacccaaaaccttaaggaaataggtttatgggtcctcttacttatagggtattcaac 428  Q
    ||||||||||||| ||  ||| ||||||||||||||||||| ||| |||||||||||||||||||||||| ||| ||||||    
T  36178639 caagcaagagagacaccacactcttacccaaaaccttaaggcaatgggtttatgggtcctcttacttataaggtgttcaac 36178719  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 348 - 428
Target Start/End: Complemental strand, 37106312 - 37106232
Alignment:
Q  348 caagcaagagagagacgccacacttacccaaaaccttaaggaaataggtttatgggtcctcttacttatagggtattcaac 428  Q
    ||||||||||| | ||  ||| ||||||||||||||||||||||| |||||||||||||||||||||||| ||| ||||||    
T  37106312 caagcaagagaaacaccacactcttacccaaaaccttaaggaaatgggtttatgggtcctcttacttataaggtgttcaac 37106232  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 356 - 428
Target Start/End: Original strand, 14745707 - 14745781
Alignment:
Q  356 agagagacgccacact--tacccaaaaccttaaggaaataggtttatgggtcctcttacttatagggtattcaac 428  Q
    ||||||||||||||||  ||||||||||||||||| ||| |||||||||||||||||||||||| ||| ||||||    
T  14745707 agagagacgccacactcttacccaaaaccttaaggcaatgggtttatgggtcctcttacttataaggtgttcaac 14745781  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 356 - 428
Target Start/End: Complemental strand, 15880381 - 15880307
Alignment:
Q  356 agagagacgccacact--tacccaaaaccttaaggaaataggtttatgggtcctcttacttatagggtattcaac 428  Q
    ||||||||||||||||  ||||||||||||||||| ||| |||||||||||||||||||||||| ||| ||||||    
T  15880381 agagagacgccacactcttacccaaaaccttaaggcaatgggtttatgggtcctcttacttataaggtgttcaac 15880307  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 87 - 165
Target Start/End: Complemental strand, 7317712 - 7317634
Alignment:
Q  87 aaaacaatgacgtgtcatattttaatttgttgtttgtaagaatgatatgttaggttcgttcctacacaagaatttctct 165  Q
    ||||||| |||||||||| ||||| ||||||||| ||||| |||||| ||||||||||||||||||||| | |||||||    
T  7317712 aaaacaacgacgtgtcatgttttagtttgttgttagtaaggatgataggttaggttcgttcctacacaaaagtttctct 7317634  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 106 - 164
Target Start/End: Complemental strand, 13279898 - 13279840
Alignment:
Q  106 ttttaatttgttgtttgtaagaatgatatgttaggttcgttcctacacaagaatttctc 164  Q
    ||||||||||||||||||||| ||||||  |||||||||||||||||||||||||||||    
T  13279898 ttttaatttgttgtttgtaaggatgatagattaggttcgttcctacacaagaatttctc 13279840  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 107 - 169
Target Start/End: Complemental strand, 15330505 - 15330444
Alignment:
Q  107 tttaatttgttgtttgtaagaatgatatgttaggttcgttcctacacaagaatttctctataa 169  Q
    |||||||| |||||||||||||||||| |||||||||||||||||||||||||||||| ||||    
T  15330505 tttaatttattgtttgtaagaatgata-gttaggttcgttcctacacaagaatttctccataa 15330444  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 356 - 428
Target Start/End: Original strand, 36005920 - 36005994
Alignment:
Q  356 agagagacgccacactt--acccaaaaccttaaggaaataggtttatgggtcctcttacttatagggtattcaac 428  Q
    |||||||||||||||||  |||||||||||||||| |||  ||||||||||||||||||||||| ||| ||||||    
T  36005920 agagagacgccacacttttacccaaaaccttaaggcaatgagtttatgggtcctcttacttataaggtgttcaac 36005994  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 370 - 428
Target Start/End: Original strand, 38796676 - 38796734
Alignment:
Q  370 cttacccaaaaccttaaggaaataggtttatgggtcctcttacttatagggtattcaac 428  Q
    ||||||||||||||||||| | |||||||||||||||||||||||||| ||| ||||||    
T  38796676 cttacccaaaaccttaaggcattaggtttatgggtcctcttacttataaggtgttcaac 38796734  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 348 - 428
Target Start/End: Original strand, 5543032 - 5543112
Alignment:
Q  348 caagcaagagagagacgccacacttacccaaaaccttaaggaaataggtttatgggtcctcttacttatagggtattcaac 428  Q
    ||||||| ||||| ||  ||| ||||||||||| ||||||| ||||||||||||| |||||||||||||| ||| ||||||    
T  5543032 caagcaatagagacaccacactcttacccaaaatcttaaggcaataggtttatggatcctcttacttataaggtgttcaac 5543112  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 352 - 417
Target Start/End: Original strand, 28254273 - 28254340
Alignment:
Q  352 caagagagagacgccacact--tacccaaaaccttaaggaaataggtttatgggtcctcttacttata 417  Q
    |||||||||||| |||||||  ||||||||||||||||| |||  |||||||||||||||||||||||    
T  28254273 caagagagagacaccacactcttacccaaaaccttaaggcaatgagtttatgggtcctcttacttata 28254340  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 349 - 417
Target Start/End: Complemental strand, 33731771 - 33731703
Alignment:
Q  349 aagcaagagagagacgccacacttacccaaaaccttaaggaaataggtttatgggtcctcttacttata 417  Q
    |||||||||||| ||   || ||||||||||||||||||| ||||||||||||| ||||||||||||||    
T  33731771 aagcaagagagacaccatactcttacccaaaaccttaaggcaataggtttatggatcctcttacttata 33731703  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 356 - 428
Target Start/End: Original strand, 41283515 - 41283589
Alignment:
Q  356 agagagacgccacact--tacccaaaaccttaaggaaataggtttatgggtcctcttacttatagggtattcaac 428  Q
    ||||||||||||||||  |||| |||||||||||| |||  ||||||||||||||||||||||| ||| ||||||    
T  41283515 agagagacgccacactcttacctaaaaccttaaggcaatgagtttatgggtcctcttacttataaggtgttcaac 41283589  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 356 - 428
Target Start/End: Complemental strand, 42514767 - 42514693
Alignment:
Q  356 agagagacgccacact--tacccaaaaccttaaggaaataggtttatgggtcctcttacttatagggtattcaac 428  Q
    ||||||||||||||||  ||||||||| |||||||  || |||||||||||||||||||||||| ||| ||||||    
T  42514767 agagagacgccacactcttacccaaaatcttaaggcgatgggtttatgggtcctcttacttataaggtgttcaac 42514693  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 356 - 415
Target Start/End: Original strand, 14745334 - 14745395
Alignment:
Q  356 agagagacgccacact--tacccaaaaccttaaggaaataggtttatgggtcctcttactta 415  Q
    ||||||||||||||||  ||||||||||||||||| ||| ||||||||||||||| ||||||    
T  14745334 agagagacgccacactcttacccaaaaccttaaggcaatgggtttatgggtcctcatactta 14745395  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 356 - 410
Target Start/End: Complemental strand, 6421849 - 6421793
Alignment:
Q  356 agagagacgccacact--tacccaaaaccttaaggaaataggtttatgggtcctctt 410  Q
    |||||||| |||||||  ||||||||||||||||| |||||||||||||||||||||    
T  6421849 agagagacaccacactcttacccaaaaccttaaggcaataggtttatgggtcctctt 6421793  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 348 - 417
Target Start/End: Original strand, 15511529 - 15511598
Alignment:
Q  348 caagcaagagagagacgccacacttacccaaaaccttaaggaaataggtttatgggtcctcttacttata 417  Q
    ||||||||||||| ||  ||| ||||||||||| ||||||  ||| ||||||||||||||||||||||||    
T  15511529 caagcaagagagacaccacactcttacccaaaatcttaagacaatgggtttatgggtcctcttacttata 15511598  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 348 - 428
Target Start/End: Complemental strand, 6421509 - 6421429
Alignment:
Q  348 caagcaagagagagacgccacacttacccaaaaccttaaggaaataggtttatgggtcctcttacttatagggtattcaac 428  Q
    ||||||||||||| ||  ||| |||||||||||||| |||| |||  ||||||| ||||||||||||||| ||| ||||||    
T  6421509 caagcaagagagacaccacactcttacccaaaacctcaaggcaatgagtttatgagtcctcttacttataaggtgttcaac 6421429  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 349 - 428
Target Start/End: Complemental strand, 6713100 - 6713020
Alignment:
Q  349 aagcaagagagagacgccacacttacccaaaa-ccttaaggaaataggtttatgggtcctcttacttatagggtattcaac 428  Q
    |||||||||||| |   ||| ||||||||||| |||||| | |||||||||||||||||||||||||||| ||| ||||||    
T  6713100 aagcaagagagacatcacactcttacccaaaaaccttaaagcaataggtttatgggtcctcttacttataaggtgttcaac 6713020  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 348 - 428
Target Start/End: Complemental strand, 37106048 - 37105968
Alignment:
Q  348 caagcaagagagagacgccacacttacccaaaaccttaaggaaataggtttatgggtcctcttacttatagggtattcaac 428  Q
    ||||||||||||| ||  ||| ||||||||||| ||||||| |||  |||||||||||| |||||||||| ||| ||||||    
T  37106048 caagcaagagagacaccacactcttacccaaaatcttaaggcaatgagtttatgggtccccttacttataaggtgttcaac 37105968  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 355 - 428
Target Start/End: Complemental strand, 40733636 - 40733561
Alignment:
Q  355 gagagagacgccacact--tacccaaaaccttaaggaaataggtttatgggtcctcttacttatagggtattcaac 428  Q
    ||||||||| |||||||  |||||||||| ||||||   |||||||||||||||||||||||||| ||| ||||||    
T  40733636 gagagagacaccacactcttacccaaaactttaaggttgtaggtttatgggtcctcttacttataaggtgttcaac 40733561  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #42
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 370 - 417
Target Start/End: Original strand, 31259672 - 31259719
Alignment:
Q  370 cttacccaaaaccttaaggaaataggtttatgggtcctcttacttata 417  Q
    |||||||||||||||||||  ||||||||||||||| |||||||||||    
T  31259672 cttacccaaaaccttaaggtgataggtttatgggtcatcttacttata 31259719  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #43
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 356 - 428
Target Start/End: Original strand, 40679669 - 40679743
Alignment:
Q  356 agagagacgccacact--tacccaaaaccttaaggaaataggtttatgggtcctcttacttatagggtattcaac 428  Q
    ||||||||||||||||  ||||||||| |||||||  || ||||||||||| |||||||||||| ||| ||||||    
T  40679669 agagagacgccacactcttacccaaaatcttaaggcgatgggtttatgggttctcttacttataaggtgttcaac 40679743  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #44
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 370 - 428
Target Start/End: Complemental strand, 962700 - 962642
Alignment:
Q  370 cttacccaaaaccttaaggaaataggtttatgggtcctcttacttatagggtattcaac 428  Q
    ||||||||||||||||||  ||| |||||||||||||||| ||||||| ||| ||||||    
T  962700 cttacccaaaaccttaagacaatgggtttatgggtcctctcacttataaggtgttcaac 962642  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #45
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 348 - 417
Target Start/End: Complemental strand, 6422234 - 6422165
Alignment:
Q  348 caagcaagagagagacgccacacttacccaaaaccttaaggaaataggtttatgggtcctcttacttata 417  Q
    ||||||||||||| ||  ||| |||||| ||||||||||||  || |||||||||||||||||| |||||    
T  6422234 caagcaagagagacaccacactcttacctaaaaccttaaggctatgggtttatgggtcctcttaattata 6422165  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #46
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 348 - 428
Target Start/End: Original strand, 36178205 - 36178285
Alignment:
Q  348 caagcaagagagagacgccacacttacccaaaaccttaaggaaataggtttatgggtcctcttacttatagggtattcaac 428  Q
    ||||||||||||  ||  ||| ||||||||||| ||||||| ||| ||||||||||| | |||||||||| ||| ||||||    
T  36178205 caagcaagagaggcaccacactcttacccaaaatcttaaggcaatgggtttatgggttcccttacttataaggtgttcaac 36178285  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #47
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 356 - 428
Target Start/End: Original strand, 35580764 - 35580837
Alignment:
Q  356 agagagacgccacact--tacccaaaaccttaaggaaataggtttatgggtcctcttacttatagggtattcaac 428  Q
    ||||||||||| ||||  ||||||||||||||||| ||| ||||||| |||||||| ||||||| ||| ||||||    
T  35580764 agagagacgccgcactcttacccaaaaccttaaggcaatgggtttat-ggtcctctcacttataaggtgttcaac 35580837  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #48
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 370 - 417
Target Start/End: Original strand, 37632653 - 37632700
Alignment:
Q  370 cttacccaaaaccttaaggaaataggtttatgggtcctcttacttata 417  Q
    ||||||||||||||||| |  || ||||||||||||||||||||||||    
T  37632653 cttacccaaaaccttaaagttatgggtttatgggtcctcttacttata 37632700  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #49
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 326 - 428
Target Start/End: Original strand, 40163388 - 40163487
Alignment:
Q  326 gaggttagaacaatcacacaagcaagcaagagagagacgccacactt--acccaaaaccttaaggaaa-taggtttatgggtcctcttacttatagggta 422  Q
    ||||||||||||| ||||||||||||      |||||| ||||||||  |||||||||||||| || | |||||| ||||||| ||||||||||| |||     
T  40163388 gaggttagaacaaccacacaagcaag------agagacaccacacttttacccaaaaccttaaagacactaggttaatgggtcatcttacttataaggtg 40163481  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #50
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 370 - 428
Target Start/End: Original strand, 28531370 - 28531428
Alignment:
Q  370 cttacccaaaaccttaaggaaataggtttatgggtcctcttacttatagggtattcaac 428  Q
    ||||||||||| ||||||| |||  ||||||||| ||||||||||||| ||| ||||||    
T  28531370 cttacccaaaatcttaaggcaatgagtttatgggacctcttacttataaggtgttcaac 28531428  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #51
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 371 - 405
Target Start/End: Complemental strand, 30312890 - 30312856
Alignment:
Q  371 ttacccaaaaccttaaggaaataggtttatgggtc 405  Q
    ||||||||||||||||||||||| |||||||||||    
T  30312890 ttacccaaaaccttaaggaaataagtttatgggtc 30312856  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #52
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 358 - 417
Target Start/End: Complemental strand, 31385853 - 31385792
Alignment:
Q  358 agagacgccacactta--cccaaaaccttaaggaaataggtttatgggtcctcttacttata 417  Q
    |||||| |||||||||  ||||||||||||||| ||| |||||||||||||| | |||||||    
T  31385853 agagacaccacacttattcccaaaaccttaaggcaatgggtttatgggtcctttcacttata 31385792  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #53
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 135 - 165
Target Start/End: Complemental strand, 36059277 - 36059247
Alignment:
Q  135 gttaggttcgttcctacacaagaatttctct 165  Q
    |||||||||||||||||||||||||||||||    
T  36059277 gttaggttcgttcctacacaagaatttctct 36059247  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #54
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 356 - 410
Target Start/End: Complemental strand, 6421744 - 6421688
Alignment:
Q  356 agagagacgccacact--tacccaaaaccttaaggaaataggtttatgggtcctctt 410  Q
    |||||||| |||||||  ||||||||||||| ||  |||||||||||||||||||||    
T  6421744 agagagacaccacactcttacccaaaacctttagtcaataggtttatgggtcctctt 6421688  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #55
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 372 - 417
Target Start/End: Original strand, 25390326 - 25390371
Alignment:
Q  372 tacccaaaaccttaaggaaataggtttatgggtcctcttacttata 417  Q
    ||||||||||||||||  |||||||||||||||| ||||| |||||    
T  25390326 tacccaaaaccttaagacaataggtttatgggtcttcttagttata 25390371  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #56
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 355 - 417
Target Start/End: Complemental strand, 30313296 - 30313232
Alignment:
Q  355 gagagagacgccacact--tacccaaaaccttaaggaaataggtttatgggtcctcttacttata 417  Q
    |||||||||||||||||  ||||||||| ||||||| |||  |||| |||||||||| |||||||    
T  30313296 gagagagacgccacactcttacccaaaatcttaaggcaatgagtttttgggtcctctcacttata 30313232  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #57
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 370 - 411
Target Start/End: Original strand, 31468806 - 31468847
Alignment:
Q  370 cttacccaaaaccttaaggaaataggtttatgggtcctctta 411  Q
    ||||||||||||||||||| |||  |||||||||||||||||    
T  31468806 cttacccaaaaccttaaggcaatgagtttatgggtcctctta 31468847  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #58
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 357 - 414
Target Start/End: Complemental strand, 30323581 - 30323522
Alignment:
Q  357 gagagacgccacact--tacccaaaaccttaaggaaataggtttatgggtcctcttactt 414  Q
    |||||||||||||||  ||||||||||||||||| |||  |||||| |||||||| ||||    
T  30323581 gagagacgccacactcttacccaaaaccttaaggcaatgagtttataggtcctctcactt 30323522  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #59
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 355 - 408
Target Start/End: Original strand, 35580477 - 35580534
Alignment:
Q  355 gagagagacgccacact----tacccaaaaccttaaggaaataggtttatgggtcctc 408  Q
    |||||||||||||||||    ||||||||||||||||| |||  ||||||||||||||    
T  35580477 gagagagacgccacactctcttacccaaaaccttaaggcaatgagtttatgggtcctc 35580534  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0214 (Bit Score: 73; Significance: 3e-33; HSPs: 2)
Name: scaffold0214
Description:

Target: scaffold0214; HSP #1
Raw Score: 73; E-Value: 3e-33
Query Start/End: Original strand, 72 - 160
Target Start/End: Complemental strand, 11718 - 11630
Alignment:
Q  72 taattattttaaaataaaacaatgacgtgtcatattttaatttgttgtttgtaagaatgatatgttaggttcgttcctacacaagaatt 160  Q
    |||||||||||||| |||||||||| ||||||||||||||||||||||||||||| |||||| ||||||||||||||||||||||||||    
T  11718 taattattttaaaagaaaacaatgatgtgtcatattttaatttgttgtttgtaaggatgataggttaggttcgttcctacacaagaatt 11630  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0214; HSP #2
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 87 - 164
Target Start/End: Original strand, 11814 - 11891
Alignment:
Q  87 aaaacaatgacgtgtcatattttaatttgttgtttgtaagaatgatatgttaggttcgttcctacacaagaatttctc 164  Q
    ||||||| |||||||||| ||||||||||||||||||||| |||||| ||||||||||||||||||||||||||||||    
T  11814 aaaacaacgacgtgtcatgttttaatttgttgtttgtaaggatgataggttaggttcgttcctacacaagaatttctc 11891  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0140 (Bit Score: 70; Significance: 2e-31; HSPs: 3)
Name: scaffold0140
Description:

Target: scaffold0140; HSP #1
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 82 - 167
Target Start/End: Complemental strand, 15929 - 15844
Alignment:
Q  82 aaaataaaacaatgacgtgtcatattttaatttgttgtttgtaagaatgatatgttaggttcgttcctacacaagaatttctctat 167  Q
    |||| |||| ||| ||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  15929 aaaaaaaaataataacgtgtcatgttttaatttgttgtttgtaagaatgatatgttaggttcgttcctacacaagaatttctctat 15844  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0140; HSP #2
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 16 - 93
Target Start/End: Original strand, 15967 - 16044
Alignment:
Q  16 aaataatggttgagagagaggaagagcagttatttttcatttcttaaattatttcctaattattttaaaataaaacaa 93  Q
    ||||||||||||||||||||||  ||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  15967 aaataatggttgagagagaggagtagcagttatttttcatttcttaaattatttcctaattattttaaaataaaacaa 16044  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0140; HSP #3
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 133 - 162
Target Start/End: Original strand, 16045 - 16074
Alignment:
Q  133 atgttaggttcgttcctacacaagaatttc 162  Q
    ||||||||||||||||||||||||||||||    
T  16045 atgttaggttcgttcctacacaagaatttc 16074  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0135 (Bit Score: 54; Significance: 7e-22; HSPs: 2)
Name: scaffold0135
Description:

Target: scaffold0135; HSP #1
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 87 - 164
Target Start/End: Complemental strand, 37523 - 37446
Alignment:
Q  87 aaaacaatgacgtgtcatattttaatttgttgtttgtaagaatgatatgttaggttcgttcctacacaagaatttctc 164  Q
    ||||||| |||||||||| ||||||||||||||||||||| ||| || | ||||||||||||||||||||||||||||    
T  37523 aaaacaacgacgtgtcatgttttaatttgttgtttgtaaggatggtaggctaggttcgttcctacacaagaatttctc 37446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0135; HSP #2
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 72 - 145
Target Start/End: Original strand, 37618 - 37691
Alignment:
Q  72 taattattttaaaataaaacaatgacgtgtcatattttaatttgttgtttgtaagaatgatatgttaggttcgt 145  Q
    |||||||||||||| ||||||| |||||  ||| ||||||||||||||||||||| |||||| |||||||||||    
T  37618 taattattttaaaagaaaacaacgacgtagcatgttttaatttgttgtttgtaaggatgataggttaggttcgt 37691  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0702 (Bit Score: 45; Significance: 2e-16; HSPs: 1)
Name: scaffold0702
Description:

Target: scaffold0702; HSP #1
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 348 - 428
Target Start/End: Original strand, 548 - 628
Alignment:
Q  348 caagcaagagagagacgccacacttacccaaaaccttaaggaaataggtttatgggtcctcttacttatagggtattcaac 428  Q
    ||||||||| ||| ||  ||| ||||||||||||||||||| ||| |||||||||||||||||||||||| ||| ||||||    
T  548 caagcaagaaagacaccacactcttacccaaaaccttaaggcaatgggtttatgggtcctcttacttataaggtgttcaac 628  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0078 (Bit Score: 37; Significance: 0.00000000001; HSPs: 1)
Name: scaffold0078
Description:

Target: scaffold0078; HSP #1
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 352 - 428
Target Start/End: Complemental strand, 5477 - 5401
Alignment:
Q  352 caagagagagacgccacacttacccaaaaccttaaggaaataggtttatgggtcctcttacttatagggtattcaac 428  Q
    ||||||||| ||  ||| |||| |||||| ||||||| ||| |||||||||||||||||||||||| ||| ||||||    
T  5477 caagagagacaccacactcttatccaaaatcttaaggcaatgggtttatgggtcctcttacttataaggtgttcaac 5401  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0391 (Bit Score: 35; Significance: 0.0000000002; HSPs: 2)
Name: scaffold0391
Description:

Target: scaffold0391; HSP #1
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 354 - 417
Target Start/End: Original strand, 1729 - 1794
Alignment:
Q  354 agagagagacgccacact--tacccaaaaccttaaggaaataggtttatgggtcctcttacttata 417  Q
    |||||||||| |||||||  |||| |||||||||||| ||| |||||||||||||||| |||||||    
T  1729 agagagagacaccacactcttaccaaaaaccttaaggcaatgggtttatgggtcctctcacttata 1794  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0391; HSP #2
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 370 - 428
Target Start/End: Original strand, 1162 - 1220
Alignment:
Q  370 cttacccaaaaccttaaggaaataggtttatgggtcctcttacttatagggtattcaac 428  Q
    ||||||||||||||||||| ||| |||||||| ||||| || |||||| ||| ||||||    
T  1162 cttacccaaaaccttaaggcaatgggtttatgagtcctttttcttataaggtgttcaac 1220  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0734 (Bit Score: 31; Significance: 0.00000004; HSPs: 2)
Name: scaffold0734
Description:

Target: scaffold0734; HSP #1
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 382 - 428
Target Start/End: Complemental strand, 5867 - 5821
Alignment:
Q  382 cttaaggaaataggtttatgggtcctcttacttatagggtattcaac 428  Q
    ||||||| ||| |||||||||||||||||||||||| ||| ||||||    
T  5867 cttaaggcaatgggtttatgggtcctcttacttataaggtgttcaac 5821  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0734; HSP #2
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 348 - 428
Target Start/End: Complemental strand, 5521 - 5440
Alignment:
Q  348 caagcaagagagagacgccacacttacccaaaaccttaagga-aataggtttatgggtcctcttacttatagggtattcaac 428  Q
    ||||||||||||| ||  ||| ||||||||||| ||| | || |||| ||||||||| ||||||||||||| ||| ||||||    
T  5521 caagcaagagagacaccacactcttacccaaaaactttaagacaatatgtttatgggccctcttacttataaggtgttcaac 5440  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0027 (Bit Score: 29; Significance: 0.0000006; HSPs: 1)
Name: scaffold0027
Description:

Target: scaffold0027; HSP #1
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 371 - 427
Target Start/End: Complemental strand, 47461 - 47405
Alignment:
Q  371 ttacccaaaaccttaaggaaataggtttatgggtcctcttacttatagggtattcaa 427  Q
    ||||||||||| |||||| ||| ||||||||| | |||||||||||| ||| |||||    
T  47461 ttacccaaaactttaaggcaatgggtttatggattctcttacttataaggtgttcaa 47405  T

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