View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF10183_high_5 (Length: 247)
Name: NF10183_high_5
Description: NF10183
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF10183_high_5 |
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Alignment Details
Target: chr3 (Bit Score: 201; Significance: 1e-110; HSPs: 1)
Name: chr3
Description:
Target: chr3; HSP #1
Raw Score: 201; E-Value: 1e-110
Query Start/End: Original strand, 1 - 237
Target Start/End: Complemental strand, 25378387 - 25378151
Alignment:
| Q |
1 |
atggtttgtttgttttgtcctatgggtttggactttgcatgaaattatgcaacattttgttatgttagtgttattgttactttttctaaatttgatatct |
100 |
Q |
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| T |
25378387 |
atggtttgtttgttttgtcctatgggtttggactttgcatgaaattatgcaacattttgttattttagtgttattgttactttttttaaatttgatatct |
25378288 |
T |
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| Q |
101 |
ttcgcgtgcaattttgaataccaacatctctgattttgagacttaaatgaacagctaaatcttttacgtacaactttctcagattttgtgagaccgaaat |
200 |
Q |
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||||||||||| |||||||||| |||||||||||||||||||||||||||||| |||||||||||||||| || |||||| ||||||||||||||||||| |
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| T |
25378287 |
ttcgcgtgcaactttgaatacctacatctctgattttgagacttaaatgaacaactaaatcttttacgtataattttctcggattttgtgagaccgaaat |
25378188 |
T |
|
| Q |
201 |
ggttgttaaactttagttaagttagaattgacctatg |
237 |
Q |
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||||||||||||||||||||||||||||| ||||||| |
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| T |
25378187 |
ggttgttaaactttagttaagttagaattaacctatg |
25378151 |
T |
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