View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

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 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF10183_low_3 (Length: 360)

Name: NF10183_low_3
Description: NF10183
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF10183_low_3
NF10183_low_3
[»] chr7 (1 HSPs)
chr7 (19-317)||(1374770-1375068)


Alignment Details
Target: chr7 (Bit Score: 295; Significance: 1e-166; HSPs: 1)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 295; E-Value: 1e-166
Query Start/End: Original strand, 19 - 317
Target Start/End: Original strand, 1374770 - 1375068
Alignment:
Q  19 tacatcgcatccaattcttccctctatgaacgaacaaaacacatcgaaattgaccgtcttgttagggaaaaggcctcaatcgaagttgtttcatctactg 118  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  1374770 tacatcgcatccaattcttccctctatgaacgaacaaaacacatcgaaattgaccgtcttgttagggaaaaggcctcaatcgaagttgtttcatctactg 1374869  T
Q  119 cttattttcatagttgatcatttcccaagctgaaaatgctaaatgatcatatacaagattgtgactgcacaagtcccatctttttccggacacttaatga 218  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||    
T  1374870 cttattttcatagttgatcatttcccaagctgaaaatgctaaatgatcatatacaagattgtgactgcacaagtcccatctttttcgggacacttaatga 1374969  T
Q  219 tttcttttaccattttttaatcctataataaagtttgcatggtaaaggttaggggcacaaacagattaaacagtcttggtttgattttatataaaataa 317  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  1374970 tttcttttaccattttttaatcctataataaagtttgcatggtaaaggttaggggcacaaacagattaaacagtcttggtttgattttatataaaataa 1375068  T

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