View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF10184_low_18 (Length: 246)
Name: NF10184_low_18
Description: NF10184
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF10184_low_18 |
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| [»] chr4 (1 HSPs) |
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Alignment Details
Target: chr4 (Bit Score: 231; Significance: 1e-128; HSPs: 1)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 231; E-Value: 1e-128
Query Start/End: Original strand, 16 - 246
Target Start/End: Complemental strand, 55016819 - 55016589
Alignment:
| Q |
16 |
aataccgcattttccaacacaatcaacaatttctctatacaacctctcttgaatctcttgatccatcactaaatgaagcaaagcccattcaatggccgtt |
115 |
Q |
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| T |
55016819 |
aataccgcattttccaacacaatcaacaatttctctatacaacctctcttgaatctcttgatccatcactaaatgaagcaaagcccattcaatggccgtt |
55016720 |
T |
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| Q |
116 |
gcgctcgtgtcagtaccagcactgataatctctgacacgagcgtaaccaattcctcgtctcccaatatccctctactaggcacttccaaaccaaacaatg |
215 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
55016719 |
gcgctcgtgtcagtaccagcactgataatctctgacacgagcgtaaccaattcctcgtctcccaatatccctctactaggcacttccaaaccaaacaatg |
55016620 |
T |
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| Q |
216 |
aatccacataagcagcaccaatggcactcac |
246 |
Q |
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| T |
55016619 |
aatccacataagcagcaccaatggcactcac |
55016589 |
T |
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