View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF10184_low_21 (Length: 240)
Name: NF10184_low_21
Description: NF10184
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF10184_low_21 |
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Alignment Details
Target: chr2 (Bit Score: 223; Significance: 1e-123; HSPs: 1)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 223; E-Value: 1e-123
Query Start/End: Original strand, 12 - 238
Target Start/End: Complemental strand, 33521748 - 33521522
Alignment:
| Q |
12 |
agtatgatcttttcacatagaatgctcttacaactttcataagtaaaagtcttaatcattgatattaatggaaagctgatgactagattacattacaatt |
111 |
Q |
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| T |
33521748 |
agtatgatcttttcacatagaatgctcttacaactttcataagtaaaagtcttaatcattgatattaatggaaagctaatgactagattacattacaatt |
33521649 |
T |
|
| Q |
112 |
gacaaacaaaggaaatcattaccaacctttccacattacccaaatgaaagcaaatcaaatgacactgaaccttccactacagacaagcttttctccacct |
211 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
33521648 |
gacaaacaaaggaaatcattaccaacctttccacattacccaaatgaaagcaaatcaaatgacactgaaccttccactacagacaagcttttctccacct |
33521549 |
T |
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| Q |
212 |
aaatttccaatgccaaacctacctatg |
238 |
Q |
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||||||||||||||||||||||||||| |
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| T |
33521548 |
aaatttccaatgccaaacctacctatg |
33521522 |
T |
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