View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF10185_high_1 (Length: 525)
Name: NF10185_high_1
Description: NF10185
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF10185_high_1 |
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Alignment Details
Target: chr8 (Bit Score: 448; Significance: 0; HSPs: 1)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 448; E-Value: 0
Query Start/End: Original strand, 9 - 509
Target Start/End: Complemental strand, 15245493 - 15244983
Alignment:
| Q |
9 |
agcataggcatggctcactctaacacttaattattggttccaactagatgttgccatacccgcaaattcatgtgcttccataacctttagattttttact |
108 |
Q |
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| T |
15245493 |
agcataggcatggctcactctaacacttaattattggttccaactagatgttgccatacccgcaaattcatgtgcttccataacctttagattttttact |
15245394 |
T |
|
| Q |
109 |
acaggaggaactttgagatgataggtataaaaaatggttcttagatgacatgtatctgcaatatta----------gcatgtaagcattcctaaccgaag |
198 |
Q |
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| T |
15245393 |
acaggaggaactttgagatgataggtataaaaaatggttcttagatgacatgtatctgcaatattatcaacgcatagcatgtaagcattcctaaccgaag |
15245294 |
T |
|
| Q |
199 |
acccatagatgcaaaaatgggtcttcttagtgagagtagatggaagaagaaaaatgctcaaaacatagaacgggattgactgtaaaattgacttagtcat |
298 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
15245293 |
acccatagatgcaaaaatgggtcttcttagtgagagtagatggaagaagaaaaatgctcaaaacatagaacgggattgactgtaaaattgacttagtcat |
15245194 |
T |
|
| Q |
299 |
caccttccttcacaccttagatatacaattgttggtcaaagaattgatttttggccacactttgtgtttggtgaaattgaatgtttcctttttgcatctt |
398 |
Q |
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||||||||||||||||||||||||||||||||||||| ||||||||| ||||||||||||||||| |||||||||||||||||||||||||||||||||| |
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| T |
15245193 |
caccttccttcacaccttagatatacaattgttggtccaagaattgacttttggccacactttgtctttggtgaaattgaatgtttcctttttgcatctt |
15245094 |
T |
|
| Q |
399 |
cccaccatggacggtaaaccaaggtatttaacgatagccaaaattgcttgcacaactaaaatattagcgattgaattttgcatccgttgagggacatttt |
498 |
Q |
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| T |
15245093 |
cctaccatggacggtaagccaaggtatttaacgatagccaaaattgcttgcgcaactaaaatattagtgattgaattttgcatccgttgagggacatttt |
15244994 |
T |
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| Q |
499 |
gactttggaag |
509 |
Q |
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| T |
15244993 |
gactttggaag |
15244983 |
T |
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