View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF10185_low_30 (Length: 239)
Name: NF10185_low_30
Description: NF10185
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF10185_low_30 |
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Alignment Details
Target: chr2 (Bit Score: 192; Significance: 1e-104; HSPs: 1)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 192; E-Value: 1e-104
Query Start/End: Original strand, 1 - 224
Target Start/End: Complemental strand, 20526922 - 20526700
Alignment:
| Q |
1 |
ctgggtcattttgttttgtgattttatcaaatgggttgctcttagattttgactaaatatgtttaaagtttggaaagttgaaaccttgatctggaggatt |
100 |
Q |
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| T |
20526922 |
ctgggtcattttgttttgtgattttaacaaatgggttgctcttagattt-gactaaatatgtttaaagtttggaaagttgaaaccttgatctggaggatt |
20526824 |
T |
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| Q |
101 |
ctccaattttggtttaagaattctccaaatttgtgggaatcatgtttggtctcttagatctggagaaattgttattatgttgttggtgtttttccatgtt |
200 |
Q |
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||||||||||||||||||| |||||||| ||||| ||||| |||||||||||||||||||||||||||||||||||||||||||||||||||| |||||| |
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| T |
20526823 |
ctccaattttggtttaagatttctccaattttgtaggaattatgtttggtctcttagatctggagaaattgttattatgttgttggtgttttttcatgtt |
20526724 |
T |
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| Q |
201 |
gataattgttgtatggaacttatt |
224 |
Q |
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|||||||||||||||||||||||| |
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| T |
20526723 |
gataattgttgtatggaacttatt |
20526700 |
T |
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