View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF10186_high_23 (Length: 238)
Name: NF10186_high_23
Description: NF10186
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF10186_high_23 |
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Alignment Details
Target: chr1 (Bit Score: 211; Significance: 1e-116; HSPs: 1)
Name: chr1
Description:
Target: chr1; HSP #1
Raw Score: 211; E-Value: 1e-116
Query Start/End: Original strand, 1 - 223
Target Start/End: Original strand, 40114563 - 40114785
Alignment:
| Q |
1 |
ctgatgctagactccctttttcagacaactcaagaactagatacattcctccatccactccatagccaaccagcttagcagtattcggatggtttacatg |
100 |
Q |
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|||| |||||||||||||||||||| || ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
40114563 |
ctgaagctagactccctttttcagataattcaagaactagatacattcctccatccactccatagccaaccagcttagcagtattcggatggtttacatg |
40114662 |
T |
|
| Q |
101 |
cgccattacaccaagttcggataaaaagtctcctataatttcatcaggagttcctcttgttaaccgtttgattgctactaatcgatgattaggcaaacaa |
200 |
Q |
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|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
40114663 |
cgccattacaccaagttcggataaaaagtctcctataatttcatcaggagttcctcttgttaaccgtttgattgctactaatcgatgattaggcaaacaa |
40114762 |
T |
|
| Q |
201 |
cctttgtacacttcagcataacc |
223 |
Q |
| |
|
||||||||||||||||||||||| |
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|
| T |
40114763 |
cctttgtacacttcagcataacc |
40114785 |
T |
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