View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF10186_low_14 (Length: 340)
Name: NF10186_low_14
Description: NF10186
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF10186_low_14 |
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Alignment Details
Target: chr1 (Bit Score: 283; Significance: 1e-158; HSPs: 1)
Name: chr1
Description:
Target: chr1; HSP #1
Raw Score: 283; E-Value: 1e-158
Query Start/End: Original strand, 19 - 325
Target Start/End: Original strand, 5294974 - 5295280
Alignment:
| Q |
19 |
tgtctccgaaggtgtgggatccacacatagtcatcaacgtgatttcgatctgaatatcccggcttttccggagtttgctaataaggttggagaagatgaa |
118 |
Q |
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| T |
5294974 |
tgtctctgaaggtatgggatccacacatagtcatcaacgtgatttcgatctgaatatcccggcttttccggagtttgctaataaggttggagaagatgaa |
5295073 |
T |
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| Q |
119 |
gttgaaagtcctcatcctgttatgatgaagaagaaagctcgtgttttcgtggttcccaagattgaaattccgaattttcagtgatgaattatttgagatg |
218 |
Q |
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| T |
5295074 |
gttgaaagtcctcatcctgttatgatgaagaagaaagctcgtgttttcgtggtgcccaagattgaaattccgaattttcagtgatgaattatttgagatg |
5295173 |
T |
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| Q |
219 |
tagatttacttttagtgaaagattagtagacaagtttattttatttcttatttggaaaattttgaggattatatgattttgtataaaatttgggtttggg |
318 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||| |||||||| ||| |
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| T |
5295174 |
tagatttacttttagtgaaagattagtagacaagtttattttatttcttatttggaaaatttttaggattatatgattttgtataaagtttgggttgggg |
5295273 |
T |
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| Q |
319 |
gattcat |
325 |
Q |
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||||||| |
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| T |
5295274 |
gattcat |
5295280 |
T |
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