View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF10186_low_24 (Length: 250)
Name: NF10186_low_24
Description: NF10186
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF10186_low_24 |
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Alignment Details
Target: chr8 (Bit Score: 156; Significance: 5e-83; HSPs: 1)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 156; E-Value: 5e-83
Query Start/End: Original strand, 1 - 238
Target Start/End: Original strand, 9408846 - 9409073
Alignment:
| Q |
1 |
tgtttatcgtactatttttctgtgcatgcagttttctttttcaattcattaatataccaaatataccaaagggta-taccttttcgttaagttctaaatc |
99 |
Q |
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| T |
9408846 |
tgtttatcgtactatttttctgtgcatgaagttttctttttcaattcattaatataccaaa---------gggtaataccttttcgttaagttctaaatc |
9408936 |
T |
|
| Q |
100 |
taaaggatattactcnnnnnnnnatcataaagacaaagcatattacattacatgaaaataatcgaaacctatggtaatggaatattaagaacatattagg |
199 |
Q |
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| T |
9408937 |
taaaggatattactcttttttttatcata--gacaaagcatattacattacatgaaaataatcgaaacctatggtaatggaatattaagaacatattagg |
9409034 |
T |
|
| Q |
200 |
ttatcataaaaaatatacatcaaatgcagtttcttccta |
238 |
Q |
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||||||| ||||||||||||||||||||||||||||||| |
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| T |
9409035 |
ttatcattaaaaatatacatcaaatgcagtttcttccta |
9409073 |
T |
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