View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF10186_low_34 (Length: 236)
Name: NF10186_low_34
Description: NF10186
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF10186_low_34 |
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Alignment Details
Target: chr1 (Bit Score: 205; Significance: 1e-112; HSPs: 1)
Name: chr1
Description:
Target: chr1; HSP #1
Raw Score: 205; E-Value: 1e-112
Query Start/End: Original strand, 14 - 218
Target Start/End: Original strand, 8659942 - 8660146
Alignment:
| Q |
14 |
gcagagaaaaatggaagagactaagcaacttgctgtaaaaaactcctctaaattcaaggctcaagctgccaaggccagaaaacagaggtagtgaccgatt |
113 |
Q |
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| T |
8659942 |
gcagagaaaaatggaagagactaagcaacttgctgtaaaaaactcctctaaattcaaggctcaagctgccaaggccagaaaacagaggtagtgaccgatt |
8660041 |
T |
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| Q |
114 |
tcaatcattctcattgctgctgcatcaatgaattgtgctcattcattccttaaactttttcagcttttggtacggacaaggtcggcctcgttggcttggt |
213 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
8660042 |
tcaatcattctcattgctgctgcatcaatgaattgtgctcattcattccttaaactttttcagcttttggtacggacaaggtcggcctcgttggcttggt |
8660141 |
T |
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| Q |
214 |
cctat |
218 |
Q |
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||||| |
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| T |
8660142 |
cctat |
8660146 |
T |
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