View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF10186_low_39 (Length: 204)

Name: NF10186_low_39
Description: NF10186
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF10186_low_39
NF10186_low_39
[»] chr6 (27 HSPs)
chr6 (1-83)||(26595461-26595543)
chr6 (1-76)||(16199562-16199637)
chr6 (1-73)||(32316815-32316887)
chr6 (1-74)||(33430248-33430321)
chr6 (1-72)||(552905-552976)
chr6 (2-61)||(3853206-3853265)
chr6 (1-76)||(4820479-4820554)
chr6 (1-72)||(5694039-5694110)
chr6 (1-72)||(14818044-14818115)
chr6 (1-67)||(18737460-18737526)
chr6 (3-81)||(22079442-22079520)
chr6 (3-72)||(277105-277174)
chr6 (2-74)||(24900887-24900959)
chr6 (1-73)||(30457617-30457689)
chr6 (3-74)||(15974722-15974793)
chr6 (6-74)||(34047504-34047572)
chr6 (1-72)||(31077906-31077977)
chr6 (1-72)||(33603168-33603239)
chr6 (1-74)||(2241912-2241984)
chr6 (1-69)||(30423443-30423511)
chr6 (2-73)||(1156833-1156904)
chr6 (1-60)||(11014890-11014949)
chr6 (1-72)||(13689882-13689953)
chr6 (1-72)||(17551267-17551337)
chr6 (1-71)||(11612300-11612370)
chr6 (21-74)||(91793-91846)
chr6 (37-73)||(8098496-8098532)
[»] chr3 (64 HSPs)
chr3 (127-193)||(19224086-19224152)
chr3 (1-76)||(21217624-21217699)
chr3 (1-76)||(37056941-37057016)
chr3 (1-76)||(44383301-44383376)
chr3 (1-71)||(23592570-23592640)
chr3 (1-74)||(13348020-13348093)
chr3 (3-76)||(23600707-23600780)
chr3 (3-75)||(35376966-35377038)
chr3 (1-85)||(27541377-27541461)
chr3 (3-68)||(11630642-11630707)
chr3 (5-74)||(25641469-25641538)
chr3 (1-78)||(52326131-52326208)
chr3 (1-72)||(32924169-32924240)
chr3 (2-72)||(42889098-42889168)
chr3 (1-73)||(52939763-52939835)
chr3 (1-72)||(13735842-13735913)
chr3 (1-72)||(16969454-16969525)
chr3 (1-72)||(42356972-42357043)
chr3 (5-68)||(42997401-42997464)
chr3 (5-76)||(51982215-51982286)
chr3 (5-71)||(35201323-35201389)
chr3 (1-71)||(35597274-35597344)
chr3 (1-75)||(46624019-46624093)
chr3 (1-74)||(5114190-5114263)
chr3 (1-74)||(44856065-44856138)
chr3 (3-71)||(28539629-28539697)
chr3 (1-73)||(41309229-41309301)
chr3 (4-76)||(44463472-44463544)
chr3 (1-68)||(5244341-5244408)
chr3 (3-74)||(33939352-33939423)
chr3 (1-72)||(36670902-36670973)
chr3 (1-72)||(47472441-47472512)
chr3 (1-72)||(49086996-49087066)
chr3 (2-72)||(19149103-19149173)
chr3 (2-72)||(37503635-37503705)
chr3 (3-73)||(55151604-55151674)
chr3 (3-72)||(14226593-14226662)
chr3 (5-74)||(38926744-38926813)
chr3 (1-69)||(42358529-42358597)
chr3 (3-43)||(45711356-45711396)
chr3 (1-73)||(52254025-52254097)
chr3 (1-72)||(26014924-26014995)
chr3 (1-72)||(44413283-44413354)
chr3 (2-72)||(288839-288909)
chr3 (10-72)||(7934095-7934157)
chr3 (37-74)||(33791668-33791705)
chr3 (1-74)||(37302658-37302731)
chr3 (6-74)||(6178311-6178379)
chr3 (26-74)||(9753478-9753526)
chr3 (5-73)||(39630504-39630572)
chr3 (2-74)||(44445407-44445479)
chr3 (5-77)||(44813252-44813324)
chr3 (7-74)||(7668074-7668141)
chr3 (6-69)||(39629729-39629792)
chr3 (6-73)||(51305453-51305520)
chr3 (23-73)||(11075263-11075313)
chr3 (6-68)||(12762581-12762643)
chr3 (1-43)||(20547907-20547949)
chr3 (1-71)||(24256660-24256730)
chr3 (5-71)||(34627770-34627836)
chr3 (5-74)||(31157563-31157632)
chr3 (1-69)||(50988620-50988689)
chr3 (1-69)||(51091751-51091820)
chr3 (1-69)||(8847222-8847289)
[»] chr7 (36 HSPs)
chr7 (1-76)||(46022151-46022226)
chr7 (1-76)||(7701656-7701731)
chr7 (2-73)||(35072249-35072320)
chr7 (3-73)||(3614333-3614403)
chr7 (2-73)||(35098590-35098661)
chr7 (1-78)||(40417886-40417963)
chr7 (5-71)||(38944913-38944979)
chr7 (1-72)||(38956506-38956577)
chr7 (1-74)||(25192803-25192876)
chr7 (13-70)||(32803813-32803870)
chr7 (2-73)||(31445431-31445502)
chr7 (1-74)||(3937009-3937082)
chr7 (1-74)||(43942744-43942817)
chr7 (1-73)||(24614203-24614275)
chr7 (2-74)||(33578202-33578274)
chr7 (2-73)||(43025453-43025524)
chr7 (1-72)||(44895460-44895531)
chr7 (6-72)||(41989628-41989694)
chr7 (1-77)||(32529739-32529815)
chr7 (1-72)||(9428528-9428599)
chr7 (2-73)||(17002450-17002520)
chr7 (3-69)||(35207615-35207679)
chr7 (1-73)||(41189428-41189502)
chr7 (5-50)||(22925194-22925239)
chr7 (1-50)||(41863539-41863588)
chr7 (1-74)||(48062169-48062242)
chr7 (6-70)||(10700076-10700140)
chr7 (1-69)||(42553010-42553078)
chr7 (5-73)||(46095070-46095137)
chr7 (1-72)||(22918057-22918128)
chr7 (5-67)||(44649221-44649283)
chr7 (41-74)||(6522159-6522192)
chr7 (6-67)||(21822492-21822552)
chr7 (5-73)||(38347660-38347729)
chr7 (26-74)||(1284551-1284599)
chr7 (5-73)||(40112841-40112909)
[»] chr5 (32 HSPs)
chr5 (1-76)||(17626098-17626173)
chr5 (1-73)||(5168295-5168367)
chr5 (1-72)||(7287077-7287148)
chr5 (5-74)||(22972233-22972302)
chr5 (3-74)||(7552853-7552924)
chr5 (1-72)||(28306020-28306091)
chr5 (2-76)||(26791128-26791202)
chr5 (1-74)||(8687003-8687076)
chr5 (1-74)||(18258679-18258752)
chr5 (1-73)||(3565196-3565268)
chr5 (2-74)||(39591793-39591865)
chr5 (2-74)||(39592185-39592257)
chr5 (1-72)||(33037632-33037703)
chr5 (1-75)||(1671654-1671728)
chr5 (1-71)||(1764336-1764406)
chr5 (1-74)||(13309995-13310068)
chr5 (3-64)||(7076464-7076525)
chr5 (2-71)||(13168635-13168704)
chr5 (1-74)||(28467339-28467412)
chr5 (10-82)||(1274479-1274550)
chr5 (1-73)||(14051202-14051274)
chr5 (3-75)||(39054701-39054773)
chr5 (1-72)||(41321367-41321438)
chr5 (1-75)||(36739060-36739134)
chr5 (1-72)||(15479581-15479652)
chr5 (5-72)||(21156104-21156171)
chr5 (10-73)||(35634722-35634785)
chr5 (1-69)||(2972436-2972504)
chr5 (1-72)||(14923185-14923256)
chr5 (6-68)||(24405847-24405909)
chr5 (1-74)||(33655299-33655372)
chr5 (6-74)||(21353261-21353329)
[»] chr4 (57 HSPs)
chr4 (1-76)||(38382433-38382508)
chr4 (1-76)||(47181953-47182028)
chr4 (1-76)||(48402081-48402156)
chr4 (1-76)||(56363929-56364004)
chr4 (2-76)||(34616674-34616748)
chr4 (1-82)||(44539846-44539927)
chr4 (1-74)||(26732337-26732410)
chr4 (2-74)||(29175338-29175410)
chr4 (3-74)||(19473842-19473913)
chr4 (1-74)||(51986154-51986227)
chr4 (2-74)||(2575676-2575748)
chr4 (1-76)||(23369216-23369291)
chr4 (2-73)||(27050973-27051044)
chr4 (2-73)||(50721631-50721702)
chr4 (1-72)||(53801647-53801718)
chr4 (2-72)||(7632349-7632419)
chr4 (1-75)||(39478549-39478623)
chr4 (1-74)||(11068800-11068873)
chr4 (1-73)||(26724859-26724931)
chr4 (7-75)||(37297166-37297234)
chr4 (13-69)||(49449036-49449092)
chr4 (9-72)||(5233558-5233621)
chr4 (3-74)||(10250401-10250472)
chr4 (1-72)||(15175658-15175729)
chr4 (1-72)||(39440596-39440667)
chr4 (1-72)||(46213082-46213153)
chr4 (4-74)||(515531-515601)
chr4 (1-75)||(42853689-42853763)
chr4 (3-72)||(32130123-32130196)
chr4 (2-74)||(39195170-39195242)
chr4 (1-72)||(43175096-43175167)
chr4 (6-64)||(3316471-3316529)
chr4 (1-71)||(56474656-56474726)
chr4 (5-74)||(31641451-31641520)
chr4 (1-69)||(24575742-24575810)
chr4 (1-73)||(36178018-36178090)
chr4 (1-77)||(39654936-39655012)
chr4 (1-73)||(50831642-50831714)
chr4 (3-74)||(26492121-26492192)
chr4 (1-64)||(38134465-38134528)
chr4 (6-76)||(19232018-19232088)
chr4 (3-57)||(27354257-27354311)
chr4 (15-73)||(27965111-27965169)
chr4 (2-72)||(38376378-38376448)
chr4 (1-74)||(37997366-37997439)
chr4 (1-69)||(31995804-31995874)
chr4 (3-78)||(39606086-39606161)
chr4 (1-72)||(42491186-42491257)
chr4 (3-66)||(45083086-45083149)
chr4 (23-74)||(54974605-54974656)
chr4 (6-68)||(14603574-14603636)
chr4 (32-74)||(32866413-32866455)
chr4 (1-73)||(5622570-5622642)
chr4 (6-74)||(10473998-10474066)
chr4 (5-73)||(19174661-19174729)
chr4 (6-74)||(27371258-27371326)
chr4 (17-69)||(46283058-46283109)
[»] chr2 (54 HSPs)
chr2 (2-76)||(3097745-3097819)
chr2 (1-76)||(25270466-25270541)
chr2 (1-76)||(41056631-41056706)
chr2 (3-76)||(13333054-13333127)
chr2 (1-76)||(43487491-43487566)
chr2 (1-74)||(32477444-32477517)
chr2 (1-74)||(42421784-42421857)
chr2 (2-74)||(18254095-18254167)
chr2 (1-76)||(2076681-2076756)
chr2 (2-73)||(41195697-41195768)
chr2 (3-73)||(27490617-27490687)
chr2 (1-74)||(22888703-22888776)
chr2 (2-74)||(1352502-1352574)
chr2 (3-74)||(9647246-9647317)
chr2 (1-74)||(9194353-9194426)
chr2 (3-68)||(19642712-19642777)
chr2 (1-69)||(6049236-6049304)
chr2 (11-74)||(21611541-21611604)
chr2 (2-73)||(37737858-37737929)
chr2 (1-75)||(1248798-1248872)
chr2 (5-71)||(29349622-29349688)
chr2 (2-72)||(44654737-44654807)
chr2 (1-74)||(9760130-9760203)
chr2 (26-75)||(17767929-17767978)
chr2 (26-75)||(42340640-42340689)
chr2 (11-73)||(136049-136108)
chr2 (3-75)||(8848582-8848654)
chr2 (2-74)||(16973647-16973719)
chr2 (6-73)||(1907650-1907717)
chr2 (3-74)||(9990805-9990876)
chr2 (17-72)||(42434247-42434302)
chr2 (6-68)||(3412446-3412508)
chr2 (1-71)||(9207702-9207772)
chr2 (1-71)||(34944979-34945049)
chr2 (6-67)||(42430767-42430828)
chr2 (5-74)||(44050131-44050200)
chr2 (2-74)||(41042367-41042439)
chr2 (33-72)||(44219367-44219406)
chr2 (6-68)||(9521925-9521987)
chr2 (6-68)||(14255420-14255482)
chr2 (3-73)||(18846725-18846795)
chr2 (5-71)||(28494976-28495042)
chr2 (6-72)||(32701207-32701273)
chr2 (3-72)||(3838768-3838837)
chr2 (7-72)||(31415028-31415093)
chr2 (2-75)||(33273472-33273545)
chr2 (6-74)||(5054058-5054126)
chr2 (1-73)||(7663954-7664025)
chr2 (1-72)||(19633394-19633466)
chr2 (1-72)||(19830295-19830367)
chr2 (1-29)||(22416325-22416353)
chr2 (2-74)||(37037351-37037423)
chr2 (5-73)||(43076000-43076067)
chr2 (4-72)||(44977387-44977455)
[»] chr1 (54 HSPs)
chr1 (1-74)||(21401510-21401583)
chr1 (5-74)||(9566846-9566915)
chr1 (1-72)||(19947632-19947703)
chr1 (1-76)||(46907307-46907382)
chr1 (7-71)||(30570642-30570706)
chr1 (2-73)||(31827064-31827135)
chr1 (3-74)||(50149060-50149131)
chr1 (1-75)||(27464942-27465016)
chr1 (1-75)||(31088293-31088367)
chr1 (15-73)||(49647038-49647096)
chr1 (15-76)||(2269456-2269517)
chr1 (2-75)||(45121366-45121439)
chr1 (1-73)||(33100920-33100992)
chr1 (1-72)||(26469471-26469542)
chr1 (1-72)||(44519039-44519110)
chr1 (1-74)||(649881-649954)
chr1 (1-72)||(2571747-2571819)
chr1 (2-74)||(19055645-19055717)
chr1 (6-66)||(26020970-26021030)
chr1 (5-72)||(48103250-48103318)
chr1 (3-66)||(6809694-6809757)
chr1 (3-74)||(18434909-18434980)
chr1 (2-72)||(48470752-48470822)
chr1 (2-71)||(9988065-9988134)
chr1 (1-74)||(23645523-23645596)
chr1 (6-75)||(30467418-30467487)
chr1 (1-66)||(50932416-50932481)
chr1 (1-73)||(52576188-52576261)
chr1 (15-75)||(32915389-32915449)
chr1 (2-74)||(43775319-43775391)
chr1 (1-68)||(35369812-35369879)
chr1 (1-72)||(37619656-37619727)
chr1 (7-74)||(45640419-45640486)
chr1 (1-72)||(50726136-50726207)
chr1 (2-72)||(3981914-3981984)
chr1 (1-74)||(18512229-18512302)
chr1 (3-71)||(49065253-49065321)
chr1 (11-74)||(40328655-40328718)
chr1 (37-75)||(29359773-29359811)
chr1 (1-66)||(3851270-3851335)
chr1 (1-74)||(37274919-37274992)
chr1 (6-67)||(43367794-43367855)
chr1 (5-73)||(25672458-25672526)
chr1 (1-72)||(44914459-44914531)
chr1 (17-72)||(8350087-8350142)
chr1 (5-68)||(29706595-29706658)
chr1 (1-72)||(51571234-51571305)
chr1 (10-72)||(4466816-4466877)
chr1 (6-67)||(5486014-5486074)
chr1 (3-72)||(26207955-26208024)
chr1 (6-74)||(3672429-3672497)
chr1 (1-29)||(27533415-27533443)
chr1 (1-73)||(30735180-30735252)
chr1 (35-75)||(34974722-34974762)
[»] chr8 (31 HSPs)
chr8 (1-78)||(29025372-29025449)
chr8 (2-72)||(23754594-23754664)
chr8 (3-74)||(37133748-37133819)
chr8 (2-74)||(12898815-12898887)
chr8 (17-72)||(7598836-7598891)
chr8 (5-76)||(10839366-10839437)
chr8 (1-72)||(22719552-22719623)
chr8 (2-73)||(24479336-24479407)
chr8 (5-71)||(32133439-32133505)
chr8 (1-73)||(11253429-11253501)
chr8 (1-81)||(34639645-34639725)
chr8 (1-76)||(27325870-27325945)
chr8 (3-64)||(3381467-3381527)
chr8 (1-74)||(13106592-13106665)
chr8 (1-69)||(32501087-32501155)
chr8 (1-73)||(34186719-34186791)
chr8 (1-85)||(37449300-37449384)
chr8 (2-74)||(43397894-43397966)
chr8 (1-72)||(4054174-4054245)
chr8 (3-78)||(36660332-36660407)
chr8 (1-72)||(38958439-38958510)
chr8 (1-72)||(42768316-42768387)
chr8 (5-67)||(27854661-27854723)
chr8 (7-73)||(36969561-36969627)
chr8 (6-75)||(34796499-34796568)
chr8 (5-75)||(13244322-13244392)
chr8 (1-74)||(21526165-21526239)
chr8 (3-69)||(36816507-36816573)
chr8 (1-66)||(36251438-36251503)
chr8 (1-72)||(5740673-5740744)
chr8 (6-74)||(37754679-37754747)
[»] scaffold0199 (1 HSPs)
scaffold0199 (1-74)||(8780-8853)
[»] scaffold0056 (1 HSPs)
scaffold0056 (1-74)||(76505-76578)
[»] scaffold0087 (1 HSPs)
scaffold0087 (2-72)||(53249-53319)
[»] scaffold0519 (1 HSPs)
scaffold0519 (1-73)||(11894-11966)
[»] scaffold0184 (1 HSPs)
scaffold0184 (1-73)||(16676-16747)
[»] scaffold0078 (1 HSPs)
scaffold0078 (1-73)||(56097-56168)
[»] scaffold0098 (1 HSPs)
scaffold0098 (1-72)||(49407-49478)
[»] scaffold0005 (1 HSPs)
scaffold0005 (6-68)||(213742-213804)
[»] scaffold0148 (1 HSPs)
scaffold0148 (5-74)||(20787-20856)
[»] scaffold0019 (1 HSPs)
scaffold0019 (6-75)||(71473-71542)


Alignment Details
Target: chr6 (Bit Score: 75; Significance: 1e-34; HSPs: 27)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 1 - 83
Target Start/End: Original strand, 26595461 - 26595543
Alignment:
Q  1 cctcattttctttgtaaaattttggttgtttcaaaagttgtcatataaatgaatgttcaaataacacaactcttaatataatt 83  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||| ||||||||    
T  26595461 cctcattttctttgtaaaattttggttgtttcaaaagttgtcatataaatggatgttcaaataacacaactctttatataatt 26595543  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 64; E-Value: 3e-28
Query Start/End: Original strand, 1 - 76
Target Start/End: Original strand, 16199562 - 16199637
Alignment:
Q  1 cctcattttctttgtaaaattttggttgtttcaaaagttgtcatataaatgaatgttcaaataacacaactcttaa 76  Q
    ||||||||||||| ||||||||||||||| ||||||||||||||||||||| ||||||||||||||||||||||||    
T  16199562 cctcattttctttataaaattttggttgtctcaaaagttgtcatataaatggatgttcaaataacacaactcttaa 16199637  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 1 - 73
Target Start/End: Complemental strand, 32316887 - 32316815
Alignment:
Q  1 cctcattttctttgtaaaattttggttgtttcaaaagttgtcatataaatgaatgttcaaataacacaactct 73  Q
    |||||||||||||||||||||||||||||  |||||||||||| ||| ||| |||||||||||||||||||||    
T  32316887 cctcattttctttgtaaaattttggttgtcacaaaagttgtcacatatatggatgttcaaataacacaactct 32316815  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 50; E-Value: 8e-20
Query Start/End: Original strand, 1 - 74
Target Start/End: Complemental strand, 33430321 - 33430248
Alignment:
Q  1 cctcattttctttgtaaaattttggttgtttcaaaagttgtcatataaatgaatgttcaaataacacaactctt 74  Q
    |||||||| ||||||||||||||||||||  |||||||||||| ||| |||||||| |||||||||||||||||    
T  33430321 cctcatttcctttgtaaaattttggttgtcacaaaagttgtcacatatatgaatgtccaaataacacaactctt 33430248  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 1 - 72
Target Start/End: Original strand, 552905 - 552976
Alignment:
Q  1 cctcattttctttgtaaaattttggttgtttcaaaagttgtcatataaatgaatgttcaaataacacaactc 72  Q
    |||||||| ||||||||||||||||||||  |||||||||||| ||| ||| ||||||||||||||||||||    
T  552905 cctcatttcctttgtaaaattttggttgtcacaaaagttgtcacatatatggatgttcaaataacacaactc 552976  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 2 - 61
Target Start/End: Complemental strand, 3853265 - 3853206
Alignment:
Q  2 ctcattttctttgtaaaattttggttgtttcaaaagttgtcatataaatgaatgttcaaa 61  Q
    ||||||||||||||||||| || ||||| |||||||||||||||||||||||||||||||    
T  3853265 ctcattttctttgtaaaatctttgttgtctcaaaagttgtcatataaatgaatgttcaaa 3853206  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 1 - 76
Target Start/End: Original strand, 4820479 - 4820554
Alignment:
Q  1 cctcattttctttgtaaaattttggttgtttcaaaagttgtcatataaatgaatgttcaaataacacaactcttaa 76  Q
    |||||||||||||||||||||||| |||| ||||||||| |||| |||||   |||||||||||||||||||||||    
T  4820479 cctcattttctttgtaaaattttgattgtctcaaaagttatcatgtaaatagttgttcaaataacacaactcttaa 4820554  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 1 - 72
Target Start/End: Complemental strand, 5694110 - 5694039
Alignment:
Q  1 cctcattttctttgtaaaattttggttgtttcaaaagttgtcatataaatgaatgttcaaataacacaactc 72  Q
    |||||||| ||||||||||||| |||||| ||||||||||||| ||| ||||||||| ||||||||||||||    
T  5694110 cctcatttcctttgtaaaatttaggttgtctcaaaagttgtcacatacatgaatgtttaaataacacaactc 5694039  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 1 - 72
Target Start/End: Original strand, 14818044 - 14818115
Alignment:
Q  1 cctcattttctttgtaaaattttggttgtttcaaaagttgtcatataaatgaatgttcaaataacacaactc 72  Q
    |||||||| |||| |||||||||||||||  |||||||||||||||| || |||||||||||||||||||||    
T  14818044 cctcatttcctttctaaaattttggttgtcacaaaagttgtcatatatataaatgttcaaataacacaactc 14818115  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 1 - 67
Target Start/End: Complemental strand, 18737526 - 18737460
Alignment:
Q  1 cctcattttctttgtaaaattttggttgtttcaaaagttgtcatataaatgaatgttcaaataacac 67  Q
    |||||||||||||||||||||||||||||  |||||||||||| ||| ||| |||||||||||||||    
T  18737526 cctcattttctttgtaaaattttggttgtcacaaaagttgtcacatacatggatgttcaaataacac 18737460  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 3 - 81
Target Start/End: Complemental strand, 22079520 - 22079442
Alignment:
Q  3 tcattttctttgtaaaattttggttgtttcaaaagttgtcatataaatgaatgttcaaataacacaactcttaatataa 81  Q
    |||||||||||| ||||||||||||||  ||||||| ||||| |||||| |||||||||||||||||||| | ||||||    
T  22079520 tcattttctttgcaaaattttggttgtcacaaaagtggtcatctaaatggatgttcaaataacacaactcatcatataa 22079442  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 3 - 72
Target Start/End: Original strand, 277105 - 277174
Alignment:
Q  3 tcattttctttgtaaaattttggttgtttcaaaagttgtcatataaatgaatgttcaaataacacaactc 72  Q
    |||||||||||||||||||||||||||  ||||| ||||||| |||| ||||||| ||||||||||||||    
T  277105 tcattttctttgtaaaattttggttgtcacaaaaattgtcatctaaaggaatgtttaaataacacaactc 277174  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 45; E-Value: 8e-17
Query Start/End: Original strand, 2 - 74
Target Start/End: Original strand, 24900887 - 24900959
Alignment:
Q  2 ctcattttctttgtaaaattttggttgtttcaaaagttgtcatataaatgaatgttcaaataacacaactctt 74  Q
    ||||||||||||||||||||||  ||||| |||| |||||||||||||   ||||||||||||||||||||||    
T  24900887 ctcattttctttgtaaaattttaattgttgcaaatgttgtcatataaaatgatgttcaaataacacaactctt 24900959  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 45; E-Value: 8e-17
Query Start/End: Original strand, 1 - 73
Target Start/End: Original strand, 30457617 - 30457689
Alignment:
Q  1 cctcattttctttgtaaaattttggttgtttcaaaagttgtcatataaatgaatgttcaaataacacaactct 73  Q
    ||||||||||| ||| ||||||||||| | ||||||||||||||||||||| ||||| || ||||||||||||    
T  30457617 cctcattttctatgtgaaattttggttatctcaaaagttgtcatataaatggatgttgaattaacacaactct 30457689  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 3 - 74
Target Start/End: Original strand, 15974722 - 15974793
Alignment:
Q  3 tcattttctttgtaaaattttggttgtttcaaaagttgtcatataaatgaatgttcaaataacacaactctt 74  Q
    |||||| ||||||||||||||||||||  |||||||||| | ||| ||| ||||||||||||||||||||||    
T  15974722 tcatttcctttgtaaaattttggttgtcacaaaagttgttacatatatggatgttcaaataacacaactctt 15974793  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 6 - 74
Target Start/End: Original strand, 34047504 - 34047572
Alignment:
Q  6 ttttctttgtaaaattttggttgtttcaaaagttgtcatataaatgaatgttcaaataacacaactctt 74  Q
    ||||||||||||||||||||||||  |||||||||||| ||  ||| |||||||||||||| |||||||    
T  34047504 ttttctttgtaaaattttggttgtcacaaaagttgtcacatttatggatgttcaaataacaaaactctt 34047572  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 40; E-Value: 0.00000000000007
Query Start/End: Original strand, 1 - 72
Target Start/End: Original strand, 31077906 - 31077977
Alignment:
Q  1 cctcattttctttgtaaaattttggttgtttcaaaagttgtcatataaatgaatgttcaaataacacaactc 72  Q
    ||||| || ||||||||||||||||||||  |||||||||||| ||  |||||| |||||||||||||||||    
T  31077906 cctcacttcctttgtaaaattttggttgtcacaaaagttgtcacatgtatgaatattcaaataacacaactc 31077977  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 40; E-Value: 0.00000000000007
Query Start/End: Original strand, 1 - 72
Target Start/End: Complemental strand, 33603239 - 33603168
Alignment:
Q  1 cctcattttctttgtaaaattttggttgtttcaaaagttgtcatataaatgaatgttcaaataacacaactc 72  Q
    ||||||||||||||||||||||||    | | ||||||||||||||||||| ||||||||| ||||||||||    
T  33603239 cctcattttctttgtaaaattttgacaatcttaaaagttgtcatataaatggatgttcaaaaaacacaactc 33603168  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 1 - 74
Target Start/End: Complemental strand, 2241984 - 2241912
Alignment:
Q  1 cctcattttctttgtaaaattttggttgtttcaaaagttgtcatataaatgaatgttcaaataacacaactctt 74  Q
    ||||||||||||||||  |||||||||||  |||||||| |||| |||| ||| ||||||||||||||| ||||    
T  2241984 cctcattttctttgtattattttggttgtcacaaaagttatcatgtaaa-gaaagttcaaataacacaagtctt 2241912  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 69
Target Start/End: Complemental strand, 30423511 - 30423443
Alignment:
Q  1 cctcattttctttgtaaaattttggttgtttcaaaagttgtcatataaatgaatgttcaaataacacaa 69  Q
    ||||||||||||| ||||  |||| |||| ||||||||| ||| ||||||  |||||||||||||||||    
T  30423511 cctcattttctttataaagctttgattgtatcaaaagttatcacataaatagatgttcaaataacacaa 30423443  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 2 - 73
Target Start/End: Original strand, 1156833 - 1156904
Alignment:
Q  2 ctcattttctttgtaaaattttggttgtttcaaaagttgtcatataaatgaatgttcaaataacacaactct 73  Q
    ||||||| ||||  ||||||||| ||||  |||||||| ||| ||| ||| |||||||||||||||||||||    
T  1156833 ctcatttcctttacaaaattttgattgtcacaaaagttatcaaatatatggatgttcaaataacacaactct 1156904  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 1 - 60
Target Start/End: Complemental strand, 11014949 - 11014890
Alignment:
Q  1 cctcattttctttgtaaaattttggttgtttcaaaagttgtcatataaatgaatgttcaa 60  Q
    ||||||||||||  |||||||||| |||| ||||||||| ||||||||||  ||||||||    
T  11014949 cctcattttcttcataaaattttgattgtctcaaaagttatcatataaatagatgttcaa 11014890  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 1 - 72
Target Start/End: Complemental strand, 13689953 - 13689882
Alignment:
Q  1 cctcattttctttgtaaaattttggttgtttcaaaagttgtcatataaatgaatgttcaaataacacaactc 72  Q
    |||||||| |||| ||||||||| |||||   |||| |||||| ||| ||| ||||||||||||||||||||    
T  13689953 cctcatttcctttataaaattttagttgtcgtaaaaattgtcacatatatggatgttcaaataacacaactc 13689882  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 1 - 72
Target Start/End: Complemental strand, 17551337 - 17551267
Alignment:
Q  1 cctcattttctttgtaaaattttggttgtttcaaaagttgtcatataaatgaatgttcaaataacacaactc 72  Q
    ||||||||||||| |||| ||||||||||  |||| | ||||||| ||||  ||||||||||||||||||||    
T  17551337 cctcattttctttataaa-ttttggttgtcacaaatgctgtcataaaaatagatgttcaaataacacaactc 17551267  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 71
Target Start/End: Original strand, 11612300 - 11612370
Alignment:
Q  1 cctcattttctttgtaaaattttggttgtttcaaaagttgtcatataaatgaatgttcaaataacacaact 71  Q
    |||||||||||||||||||||||| || |  ||||| || ||| ||| || ||| ||||||||||||||||    
T  11612300 cctcattttctttgtaaaattttgattatcacaaaaattatcacatatataaatattcaaataacacaact 11612370  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 21 - 74
Target Start/End: Original strand, 91793 - 91846
Alignment:
Q  21 tttggttgtttcaaaagttgtcatataaatgaatgttcaaataacacaactctt 74  Q
    |||||||||  ||| |||||| || ||||| |||||||||||||||||||||||    
T  91793 tttggttgtcacaacagttgtaatctaaataaatgttcaaataacacaactctt 91846  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 37 - 73
Target Start/End: Complemental strand, 8098532 - 8098496
Alignment:
Q  37 gttgtcatataaatgaatgttcaaataacacaactct 73  Q
    ||||||| ||| |||||||||||||||||||||||||    
T  8098532 gttgtcacatatatgaatgttcaaataacacaactct 8098496  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 67; Significance: 6e-30; HSPs: 64)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 67; E-Value: 6e-30
Query Start/End: Original strand, 127 - 193
Target Start/End: Complemental strand, 19224152 - 19224086
Alignment:
Q  127 tcctttccaaaaatggaaccaaacacaaaaatatttaatactctttctctccatccccttctcttca 193  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  19224152 tcctttccaaaaatggaaccaaacacaaaaatatttaatactctttctctccatccccttctcttca 19224086  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 64; E-Value: 3e-28
Query Start/End: Original strand, 1 - 76
Target Start/End: Original strand, 21217624 - 21217699
Alignment:
Q  1 cctcattttctttgtaaaattttggttgtttcaaaagttgtcatataaatgaatgttcaaataacacaactcttaa 76  Q
    ||||||||||||| ||||||||||||||| ||||||||||||||||||||| ||||||||||||||||||||||||    
T  21217624 cctcattttctttataaaattttggttgtctcaaaagttgtcatataaatggatgttcaaataacacaactcttaa 21217699  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 64; E-Value: 3e-28
Query Start/End: Original strand, 1 - 76
Target Start/End: Complemental strand, 37057016 - 37056941
Alignment:
Q  1 cctcattttctttgtaaaattttggttgtttcaaaagttgtcatataaatgaatgttcaaataacacaactcttaa 76  Q
    |||||||||||||||||||| |||||||| ||||||||||||||||||||| ||||||||||||||||||||||||    
T  37057016 cctcattttctttgtaaaatattggttgtctcaaaagttgtcatataaatggatgttcaaataacacaactcttaa 37056941  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 60; E-Value: 9e-26
Query Start/End: Original strand, 1 - 76
Target Start/End: Original strand, 44383301 - 44383376
Alignment:
Q  1 cctcattttctttgtaaaattttggttgtttcaaaagttgtcatataaatgaatgttcaaataacacaactcttaa 76  Q
    ||||||||||||| |||||||||| |||| ||||||||||||||||||||| ||||||||||||||||||||||||    
T  44383301 cctcattttctttataaaattttgattgtctcaaaagttgtcatataaatggatgttcaaataacacaactcttaa 44383376  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 59; E-Value: 3e-25
Query Start/End: Original strand, 1 - 71
Target Start/End: Original strand, 23592570 - 23592640
Alignment:
Q  1 cctcattttctttgtaaaattttggttgtttcaaaagttgtcatataaatgaatgttcaaataacacaact 71  Q
    ||||||||||||| ||||||||||||||| ||||||||||||||||||||| |||||||||||||||||||    
T  23592570 cctcattttctttataaaattttggttgtctcaaaagttgtcatataaatggatgttcaaataacacaact 23592640  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 58; E-Value: 1e-24
Query Start/End: Original strand, 1 - 74
Target Start/End: Complemental strand, 13348093 - 13348020
Alignment:
Q  1 cctcattttctttgtaaaattttggttgtttcaaaagttgtcatataaatgaatgttcaaataacacaactctt 74  Q
    |||||||||||||||||||||||||||||  |||||||||||||||||||| |||||||||||||| |||||||    
T  13348093 cctcattttctttgtaaaattttggttgtcccaaaagttgtcatataaatggatgttcaaataacataactctt 13348020  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 58; E-Value: 1e-24
Query Start/End: Original strand, 3 - 76
Target Start/End: Original strand, 23600707 - 23600780
Alignment:
Q  3 tcattttctttgtaaaattttggttgtttcaaaagttgtcatataaatgaatgttcaaataacacaactcttaa 76  Q
    ||||||||||| ||||||||||||||| ||||||||||||||||||||| ||||||||||||||||||| ||||    
T  23600707 tcattttctttataaaattttggttgtctcaaaagttgtcatataaatggatgttcaaataacacaacttttaa 23600780  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 57; E-Value: 5e-24
Query Start/End: Original strand, 3 - 75
Target Start/End: Complemental strand, 35377038 - 35376966
Alignment:
Q  3 tcattttctttgtaaaattttggttgtttcaaaagttgtcatataaatgaatgttcaaataacacaactctta 75  Q
    |||||||||||||||||||||||||||  ||||||||||||| |||||| |||||||||||||||||||||||    
T  35377038 tcattttctttgtaaaattttggttgtcacaaaagttgtcatctaaatggatgttcaaataacacaactctta 35376966  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 1 - 85
Target Start/End: Complemental strand, 27541461 - 27541377
Alignment:
Q  1 cctcattttctttgtaaaattttggttgtttcaaaagttgtcatataaatgaatgttcaaataacacaactcttaatataattca 85  Q
    |||||||| ||||||||||||||||||||  |||||||||||| ||| ||| |||||||||||||||||||||| |||| |||||    
T  27541461 cctcatttcctttgtaaaattttggttgtcacaaaagttgtcacatatatggatgttcaaataacacaactctttatattattca 27541377  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 50; E-Value: 8e-20
Query Start/End: Original strand, 3 - 68
Target Start/End: Complemental strand, 11630707 - 11630642
Alignment:
Q  3 tcattttctttgtaaaattttggttgtttcaaaagttgtcatataaatgaatgttcaaataacaca 68  Q
    |||||||||||||||||||||  |||| |||||| |||||||||||||||||||||||||||||||    
T  11630707 tcattttctttgtaaaattttaattgtctcaaaaattgtcatataaatgaatgttcaaataacaca 11630642  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 50; E-Value: 8e-20
Query Start/End: Original strand, 5 - 74
Target Start/End: Complemental strand, 25641538 - 25641469
Alignment:
Q  5 attttctttgtaaaattttggttgtttcaaaagttgtcatataaatgaatgttcaaataacacaactctt 74  Q
    ||||||| ||||||| ||||||||| ||||||||||||||||||||| |||||||||||| |||||||||    
T  25641538 attttctatgtaaaactttggttgtctcaaaagttgtcatataaatggatgttcaaataatacaactctt 25641469  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 50; E-Value: 8e-20
Query Start/End: Original strand, 1 - 78
Target Start/End: Original strand, 52326131 - 52326208
Alignment:
Q  1 cctcattttctttgtaaaattttggttgtttcaaaagttgtcatataaatgaatgttcaaataacacaactcttaata 78  Q
    |||||||| ||||||||||||||| ||||   ||||||||||||||| ||| ||||||||||||||||||||||||||    
T  52326131 cctcatttcctttgtaaaattttgattgtcataaaagttgtcatatatatggatgttcaaataacacaactcttaata 52326208  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 1 - 72
Target Start/End: Complemental strand, 32924240 - 32924169
Alignment:
Q  1 cctcattttctttgtaaaattttggttgtttcaaaagttgtcatataaatgaatgttcaaataacacaactc 72  Q
    |||||||| ||||||||||||||||||||  |||||||||||| ||| ||| ||||||||||||||||||||    
T  32924240 cctcatttcctttgtaaaattttggttgtcacaaaagttgtcacatatatggatgttcaaataacacaactc 32924169  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 2 - 72
Target Start/End: Original strand, 42889098 - 42889168
Alignment:
Q  2 ctcattttctttgtaaaattttggttgtttcaaaagttgtcatataaatgaatgttcaaataacacaactc 72  Q
    |||||||||||||||||||||||||| | |||||||||||||| |||||  ||||| ||||||||||||||    
T  42889098 ctcattttctttgtaaaattttggttatatcaaaagttgtcatctaaatagatgtttaaataacacaactc 42889168  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 45; E-Value: 8e-17
Query Start/End: Original strand, 1 - 73
Target Start/End: Original strand, 52939763 - 52939835
Alignment:
Q  1 cctcattttctttgtaaaattttggttgtttcaaaagttgtcatataaatgaatgttcaaataacacaactct 73  Q
    |||||||| ||||||||||||||||||||  | |||||||||| ||| ||| |||||||||||||||||||||    
T  52939763 cctcatttcctttgtaaaattttggttgtcacgaaagttgtcacatatatggatgttcaaataacacaactct 52939835  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 1 - 72
Target Start/End: Original strand, 13735842 - 13735913
Alignment:
Q  1 cctcattttctttgtaaaattttggttgtttcaaaagttgtcatataaatgaatgttcaaataacacaactc 72  Q
    |||||||| ||||| ||||||||||||||  |||||||||||| ||| ||| ||||||||||||||||||||    
T  13735842 cctcatttcctttgcaaaattttggttgtcacaaaagttgtcacatatatggatgttcaaataacacaactc 13735913  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 1 - 72
Target Start/End: Complemental strand, 16969525 - 16969454
Alignment:
Q  1 cctcattttctttgtaaaattttggttgtttcaaaagttgtcatataaatgaatgttcaaataacacaactc 72  Q
    |||||||| |||||||||||||| |||||  |||||||||||| ||| ||| ||||||||||||||||||||    
T  16969525 cctcatttcctttgtaaaattttagttgtcacaaaagttgtcacatatatggatgttcaaataacacaactc 16969454  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 1 - 72
Target Start/End: Complemental strand, 42357043 - 42356972
Alignment:
Q  1 cctcattttctttgtaaaattttggttgtttcaaaagttgtcatataaatgaatgttcaaataacacaactc 72  Q
    |||||||| ||||||||||||||||||||  ||||| |||||| ||| ||| ||||||||||||||||||||    
T  42357043 cctcatttcctttgtaaaattttggttgtcacaaaaattgtcacatatatggatgttcaaataacacaactc 42356972  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 5 - 68
Target Start/End: Original strand, 42997401 - 42997464
Alignment:
Q  5 attttctttgtaaaattttggttgtttcaaaagttgtcatataaatgaatgttcaaataacaca 68  Q
    ||||||||| || |||||||||||| | ||||||||||||||||||||||||| ||||||||||    
T  42997401 attttctttatacaattttggttgtcttaaaagttgtcatataaatgaatgtttaaataacaca 42997464  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 5 - 76
Target Start/End: Original strand, 51982215 - 51982286
Alignment:
Q  5 attttctttgtaaaattttggttgtttcaaaagttgtcatataaatgaatgttcaaataacacaactcttaa 76  Q
    ||||||||| ||||||||| ||||| |||||| |||| ||||||||| || |||||||||||||||||||||    
T  51982215 attttctttataaaattttagttgtctcaaaaattgttatataaatggattttcaaataacacaactcttaa 51982286  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 5 - 71
Target Start/End: Complemental strand, 35201389 - 35201323
Alignment:
Q  5 attttctttgtaaaattttggttgtttcaaaagttgtcatataaatgaatgttcaaataacacaact 71  Q
    |||||||||||| ||||||  |||| |||||||||||||| |||||| |||||||||||||||||||    
T  35201389 attttctttgtataattttaattgtctcaaaagttgtcatttaaatggatgttcaaataacacaact 35201323  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 1 - 71
Target Start/End: Original strand, 35597274 - 35597344
Alignment:
Q  1 cctcattttctttgtaaaattttggttgtttcaaaagttgtcatataaatgaatgttcaaataacacaact 71  Q
    |||| ||| ||||||||||||||||||||  |||||||||||| ||| |||||| ||||||||||||||||    
T  35597274 cctcgtttcctttgtaaaattttggttgtcacaaaagttgtcacatatatgaatattcaaataacacaact 35597344  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 1 - 75
Target Start/End: Original strand, 46624019 - 46624093
Alignment:
Q  1 cctcattttctttgtaaaattttggttgtttcaaaagttgtcatataaatgaatgttcaaataacacaactctta 75  Q
    |||||||||||||||||||||||| ||||  |||||||| ||| ||  ||| |||||||||||||||||||||||    
T  46624019 cctcattttctttgtaaaattttgattgtcacaaaagttatcacatgtatggatgttcaaataacacaactctta 46624093  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 1 - 74
Target Start/End: Original strand, 5114190 - 5114263
Alignment:
Q  1 cctcattttctttgtaaaattttggttgtttcaaaagttgtcatataaatgaatgttcaaataacacaactctt 74  Q
    |||||||||||||||||||||||| ||||   |||| |||||| ||||||  ||||||||||||||||||||||    
T  5114190 cctcattttctttgtaaaattttgattgtcataaaaattgtcacataaatagatgttcaaataacacaactctt 5114263  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 1 - 74
Target Start/End: Original strand, 44856065 - 44856138
Alignment:
Q  1 cctcattttctttgtaaaattttggttgtttcaaaagttgtcatataaatgaatgttcaaataacacaactctt 74  Q
    |||||||| ||||||||||||||||||||   | ||||||||| ||| ||| ||||||||||||||||||||||    
T  44856065 cctcatttcctttgtaaaattttggttgtcatacaagttgtcacatatatggatgttcaaataacacaactctt 44856138  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 3 - 71
Target Start/End: Complemental strand, 28539697 - 28539629
Alignment:
Q  3 tcattttctttgtaaaattttggttgtttcaaaagttgtcatataaatgaatgttcaaataacacaact 71  Q
    |||||||||||| |||||||||||| |  |||||||| |||| |||||| |||||||||||||||||||    
T  28539697 tcattttctttgcaaaattttggttatcacaaaagttatcatctaaatggatgttcaaataacacaact 28539629  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 1 - 73
Target Start/End: Original strand, 41309229 - 41309301
Alignment:
Q  1 cctcattttctttgtaaaattttggttgtttcaaaagttgtcatataaatgaatgttcaaataacacaactct 73  Q
    |||||||||||||||||||||||| ||||  |||||||| ||  ||| ||| |||||||||||||||||||||    
T  41309229 cctcattttctttgtaaaattttgattgtcacaaaagttatcgcatatatggatgttcaaataacacaactct 41309301  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 4 - 76
Target Start/End: Original strand, 44463472 - 44463544
Alignment:
Q  4 cattttctttgtaaaattttggttgtttcaaaagttgtcatataaatgaatgttcaaataacacaactcttaa 76  Q
    ||||||||||||||||||||| || | ||||||||| |||||||| |  |||||||||||||||||| |||||    
T  44463472 cattttctttgtaaaattttgattatctcaaaagttatcatataatttgatgttcaaataacacaacacttaa 44463544  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 40; E-Value: 0.00000000000007
Query Start/End: Original strand, 1 - 68
Target Start/End: Original strand, 5244341 - 5244408
Alignment:
Q  1 cctcattttctttgtaaaattttggttgtttcaaaagttgtcatataaatgaatgttcaaataacaca 68  Q
    |||||||| ||||||||||||||||||||  ||||| |||||| ||| || |||||||||||||||||    
T  5244341 cctcatttcctttgtaaaattttggttgtcacaaaaattgtcacatatataaatgttcaaataacaca 5244408  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 40; E-Value: 0.00000000000007
Query Start/End: Original strand, 3 - 74
Target Start/End: Original strand, 33939352 - 33939423
Alignment:
Q  3 tcattttctttgtaaaattttggttgtttcaaaagttgtcatataaatgaatgttcaaataacacaactctt 74  Q
    |||||| ||||| | ||||||||||||  |||||||||||| ||| ||| ||||||||||||||||||||||    
T  33939352 tcatttcctttgaataattttggttgtcacaaaagttgtcacatatatggatgttcaaataacacaactctt 33939423  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 40; E-Value: 0.00000000000007
Query Start/End: Original strand, 1 - 72
Target Start/End: Complemental strand, 36670973 - 36670902
Alignment:
Q  1 cctcattttctttgtaaaattttggttgtttcaaaagttgtcatataaatgaatgttcaaataacacaactc 72  Q
    ||||||||  |||||||||||||||||||  |||||||| ||| ||| ||| ||||||||||||||||||||    
T  36670973 cctcatttcatttgtaaaattttggttgtcacaaaagttatcacatatatggatgttcaaataacacaactc 36670902  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 40; E-Value: 0.00000000000007
Query Start/End: Original strand, 1 - 72
Target Start/End: Original strand, 47472441 - 47472512
Alignment:
Q  1 cctcattttctttgtaaaattttggttgtttcaaaagttgtcatataaatgaatgttcaaataacacaactc 72  Q
    |||||||| ||||||||||||||||||||  |||||||||||| ||| ||  |||||||||||||| |||||    
T  47472441 cctcatttcctttgtaaaattttggttgtcacaaaagttgtcacatatatagatgttcaaataacataactc 47472512  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 40; E-Value: 0.00000000000007
Query Start/End: Original strand, 1 - 72
Target Start/End: Complemental strand, 49087066 - 49086996
Alignment:
Q  1 cctcattttctttgtaaaattttggttgtttcaaaagttgtcatataaatgaatgttcaaataacacaactc 72  Q
    |||||||||||||| ||||||||||||||||| |||||||||||| || | | | |||||||||||||||||    
T  49087066 cctcattttctttgaaaaattttggttgtttc-aaagttgtcataaaattaattattcaaataacacaactc 49086996  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 2 - 72
Target Start/End: Original strand, 19149103 - 19149173
Alignment:
Q  2 ctcattttctttgtaaaattttggttgtttcaaaagttgtcatataaatgaatgttcaaataacacaactc 72  Q
    ||||||| ||||||||||||||| ||||  ||||| |||||| ||| ||| ||||||||||||||||||||    
T  19149103 ctcatttcctttgtaaaattttgattgtcacaaaaattgtcacatatatggatgttcaaataacacaactc 19149173  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 2 - 72
Target Start/End: Complemental strand, 37503705 - 37503635
Alignment:
Q  2 ctcattttctttgtaaaattttggttgtttcaaaagttgtcatataaatgaatgttcaaataacacaactc 72  Q
    ||||||| ||||| ||||||||||||||  |||||||| ||| ||| || |||||||||||||||||||||    
T  37503705 ctcatttcctttgcaaaattttggttgtcacaaaagttatcacatatataaatgttcaaataacacaactc 37503635  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 3 - 73
Target Start/End: Complemental strand, 55151674 - 55151604
Alignment:
Q  3 tcattttctttgtaaaattttggttgtttcaaaagttgtcatataaatgaatgttcaaataacacaactct 73  Q
    |||||| ||||||||||||||  ||||  |||||||||||| ||| || ||||||||||||||||||||||    
T  55151674 tcatttcctttgtaaaattttaattgtaacaaaagttgtcacatatataaatgttcaaataacacaactct 55151604  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 3 - 72
Target Start/End: Complemental strand, 14226662 - 14226593
Alignment:
Q  3 tcattttctttgtaaaattttggttgtttcaaaagttgtcatataaatgaatgttcaaataacacaactc 72  Q
    |||||||||||||||||||||| |||| | |||| |||| | |||| ||| |||||||||||||||||||    
T  14226662 tcattttctttgtaaaattttgattgtcttaaaaattgttacataattgattgttcaaataacacaactc 14226593  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 5 - 74
Target Start/End: Original strand, 38926744 - 38926813
Alignment:
Q  5 attttctttgtaaaattttggttgtttcaaaagttgtcatataaatgaatgttcaaataacacaactctt 74  Q
    |||| ||||||||||||||||||||  | |||||||||| ||| ||  ||||||||||||||||||||||    
T  38926744 atttcctttgtaaaattttggttgtcacgaaagttgtcacatatatagatgttcaaataacacaactctt 38926813  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 1 - 69
Target Start/End: Complemental strand, 42358597 - 42358529
Alignment:
Q  1 cctcattttctttgtaaaattttggttgtttcaaaagttgtcatataaatgaatgttcaaataacacaa 69  Q
    |||||||| ||||| ||||||||| ||||  |||||||||||| ||| ||| |||||||||||||||||    
T  42358597 cctcatttcctttgcaaaattttgattgtcacaaaagttgtcacatatatggatgttcaaataacacaa 42358529  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 3 - 43
Target Start/End: Complemental strand, 45711396 - 45711356
Alignment:
Q  3 tcattttctttgtaaaattttggttgtttcaaaagttgtca 43  Q
    |||||||||||||||||||||||||||| ||||||||||||    
T  45711396 tcattttctttgtaaaattttggttgttacaaaagttgtca 45711356  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 1 - 73
Target Start/End: Complemental strand, 52254097 - 52254025
Alignment:
Q  1 cctcattttctttgtaaaattttggttgtttcaaaagttgtcatataaatgaatgttcaaataacacaactct 73  Q
    |||||||| |||||||||||||| |||||  ||||| |||||| ||| ||| |||||||||| ||||||||||    
T  52254097 cctcatttcctttgtaaaattttagttgtcacaaaaattgtcacatatatggatgttcaaatgacacaactct 52254025  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 72
Target Start/End: Original strand, 26014924 - 26014995
Alignment:
Q  1 cctcattttctttgtaaaattttggttgtttcaaaagttgtcatataaatgaatgttcaaataacacaactc 72  Q
    |||||||| ||||||||||||||||||||  |||||||||||| ||  ||  ||||| ||||||||||||||    
T  26014924 cctcatttcctttgtaaaattttggttgtcacaaaagttgtcacatgtatagatgtttaaataacacaactc 26014995  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 72
Target Start/End: Complemental strand, 44413354 - 44413283
Alignment:
Q  1 cctcattttctttgtaaaattttggttgtttcaaaagttgtcatataaatgaatgttcaaataacacaactc 72  Q
    |||||||| ||||||||||||||  ||||  |||||||||||| ||| ||  ||||||||||||||||||||    
T  44413354 cctcatttcctttgtaaaattttaattgtcacaaaagttgtcacatatatagatgttcaaataacacaactc 44413283  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 2 - 72
Target Start/End: Original strand, 288839 - 288909
Alignment:
Q  2 ctcattttctttgtaaaattttggttgtttcaaaagttgtcatataaatgaatgttcaaataacacaactc 72  Q
    |||||||  |||||||||||||| ||||| ||| |||||||| ||| ||| || |||||||||||||||||    
T  288839 ctcatttcttttgtaaaattttgattgttacaatagttgtcacatatatggattttcaaataacacaactc 288909  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 10 - 72
Target Start/End: Original strand, 7934095 - 7934157
Alignment:
Q  10 ctttgtaaaattttggttgtttcaaaagttgtcatataaatgaatgttcaaataacacaactc 72  Q
    |||||||||||||| |||||  ||||| |||||| ||| ||| ||||||||||||||||||||    
T  7934095 ctttgtaaaattttagttgtcacaaaaattgtcacatatatggatgttcaaataacacaactc 7934157  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 37 - 74
Target Start/End: Complemental strand, 33791705 - 33791668
Alignment:
Q  37 gttgtcatataaatgaatgttcaaataacacaactctt 74  Q
    ||||||||||||||| ||||||||||||||||||||||    
T  33791705 gttgtcatataaatggatgttcaaataacacaactctt 33791668  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 1 - 74
Target Start/End: Original strand, 37302658 - 37302731
Alignment:
Q  1 cctcattttctttgtaaaattttggttgtttcaaaagttgtcatataaatgaatgttcaaataacacaactctt 74  Q
    |||||||| ||||| ||||||||| ||||  |||||||||||| ||  ||| |||||||||||| |||||||||    
T  37302658 cctcatttcctttgcaaaattttgattgtcacaaaagttgtcaaatgtatggatgttcaaataagacaactctt 37302731  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 6 - 74
Target Start/End: Complemental strand, 6178379 - 6178311
Alignment:
Q  6 ttttctttgtaaaattttggttgtttcaaaagttgtcatataaatgaatgttcaaataacacaactctt 74  Q
    ||||||||  ||| || ||||||| || |||||||||||| |||||  |||||||||||||||||||||    
T  6178379 ttttctttacaaatttatggttgtatcgaaagttgtcataaaaatggttgttcaaataacacaactctt 6178311  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 26 - 74
Target Start/End: Original strand, 9753478 - 9753526
Alignment:
Q  26 ttgtttcaaaagttgtcatataaatgaatgttcaaataacacaactctt 74  Q
    |||| ||||||||||| ||| ||||||||||||||| ||||||||||||    
T  9753478 ttgtatcaaaagttgttatacaaatgaatgttcaaacaacacaactctt 9753526  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 5 - 73
Target Start/End: Complemental strand, 39630572 - 39630504
Alignment:
Q  5 attttctttgtaaaattttggttgtttcaaaagttgtcatataaatgaatgttcaaataacacaactct 73  Q
    |||||||||||||||||||| |||| | |||| || | ||||||||  |||||||||||||| ||||||    
T  39630572 attttctttgtaaaattttgattgtcttaaaaattattatataaatagatgttcaaataacaaaactct 39630504  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 2 - 74
Target Start/End: Original strand, 44445407 - 44445479
Alignment:
Q  2 ctcattttctttgtaaaattttggttgtttcaaaagttgtcatataaatgaatgttcaaataacacaactctt 74  Q
    |||||||||||| |||||||||||||||   ||||||||| | ||| ||  |||||||||||||| |||||||    
T  44445407 ctcattttctttataaaattttggttgtcataaaagttgttacatatatcgatgttcaaataacataactctt 44445479  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #52
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 5 - 77
Target Start/End: Original strand, 44813252 - 44813324
Alignment:
Q  5 attttctttgtaaaattttggttgtttcaaaagttgtcatataaatgaatgttcaaataacacaactcttaat 77  Q
    |||| ||||||||||||||| |||   |||||||||||| ||| ||  |||||||||| ||||||||||||||    
T  44813252 atttcctttgtaaaattttgattgccacaaaagttgtcacatatatagatgttcaaatcacacaactcttaat 44813324  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #53
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 7 - 74
Target Start/End: Complemental strand, 7668141 - 7668074
Alignment:
Q  7 tttctttgtaaaattttggttgtttcaaaagttgtcatataaatgaatgttcaaataacacaactctt 74  Q
    |||| ||| ||||||||||||||  |||||||||||| ||  ||| ||||||||||||||||| ||||    
T  7668141 tttccttgcaaaattttggttgtcacaaaagttgtcacatgtatggatgttcaaataacacaattctt 7668074  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #54
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 6 - 69
Target Start/End: Complemental strand, 39629792 - 39629729
Alignment:
Q  6 ttttctttgtaaaattttggttgtttcaaaagttgtcatataaatgaatgttcaaataacacaa 69  Q
    |||||||| ||||||||||||| |   ||||||||||| |||| ||| ||||||||||||||||    
T  39629792 ttttctttataaaattttggttatactaaaagttgtcacataattgattgttcaaataacacaa 39629729  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #55
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 6 - 73
Target Start/End: Complemental strand, 51305520 - 51305453
Alignment:
Q  6 ttttctttgtaaaattttggttgtttcaaaagttgtcatataaatgaatgttcaaataacacaactct 73  Q
    ||||||||||||| || ||| ||| | ||||||||||||| |||||| |||||||||| || ||||||    
T  51305520 ttttctttgtaaatttatggatgtataaaaagttgtcataaaaatgattgttcaaatatcataactct 51305453  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #56
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 23 - 73
Target Start/End: Complemental strand, 11075313 - 11075263
Alignment:
Q  23 tggttgtttcaaaagttgtcatataaatgaatgttcaaataacacaactct 73  Q
    ||||||| ||||||||||||||| |||||  ||||||||||||| ||||||    
T  11075313 tggttgtctcaaaagttgtcatacaaatggttgttcaaataacataactct 11075263  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #57
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 6 - 68
Target Start/End: Complemental strand, 12762643 - 12762581
Alignment:
Q  6 ttttctttgtaaaattttggttgtttcaaaagttgtcatataaatgaatgttcaaataacaca 68  Q
    ||||||||||||| || |||||||  || || ||||||| ||||||| |||||||||||||||    
T  12762643 ttttctttgtaaatttatggttgtcccataaattgtcatgtaaatgattgttcaaataacaca 12762581  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #58
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 43
Target Start/End: Complemental strand, 20547949 - 20547907
Alignment:
Q  1 cctcattttctttgtaaaattttggttgtttcaaaagttgtca 43  Q
    |||||||| ||||||||||||||||||||  ||||||||||||    
T  20547949 cctcatttcctttgtaaaattttggttgtcacaaaagttgtca 20547907  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #59
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 71
Target Start/End: Complemental strand, 24256730 - 24256660
Alignment:
Q  1 cctcattttctttgtaaaattttggttgtttcaaaagttgtcatataaatgaatgttcaaataacacaact 71  Q
    |||||||| ||||||||||||||  ||||  |||||||||||| ||| ||  || ||||||||||||||||    
T  24256730 cctcatttcctttgtaaaattttaattgtcacaaaagttgtcacatatatagattttcaaataacacaact 24256660  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #60
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 5 - 71
Target Start/End: Complemental strand, 34627836 - 34627770
Alignment:
Q  5 attttctttgtaaaattttggttgtttcaaaagttgtcatataaatgaatgttcaaataacacaact 71  Q
    |||||||||||||| || ||||||| | | ||||| ||||| |||| | ||||||||||||||||||    
T  34627836 attttctttgtaaatttatggttgtcttataagttatcataaaaataattgttcaaataacacaact 34627770  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #61
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 5 - 74
Target Start/End: Complemental strand, 31157632 - 31157563
Alignment:
Q  5 attttctttgtaaaattttggttgtttcaaaagttgtcatataaatgaatgttcaaataacacaactctt 74  Q
    |||| ||||||||||||||| | ||  || ||||| ||| ||| ||| ||||||||||||||||||||||    
T  31157632 atttcctttgtaaaattttgatagtcacagaagttatcacatatatggatgttcaaataacacaactctt 31157563  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #62
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 1 - 69
Target Start/End: Original strand, 50988620 - 50988689
Alignment:
Q  1 cctcattttctttgtaaaattttggttgtttcaaaa-gttgtcatataaatgaatgttcaaataacacaa 69  Q
    |||||||| ||| |||||||||| ||||||| |||| ||| ||||||| || |||||| |||||||||||    
T  50988620 cctcatttacttcgtaaaattttagttgttttaaaaagttatcatatatataaatgtttaaataacacaa 50988689  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #63
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 1 - 69
Target Start/End: Original strand, 51091751 - 51091820
Alignment:
Q  1 cctcattttctttgtaaaattttggttgtttcaaaa-gttgtcatataaatgaatgttcaaataacacaa 69  Q
    |||||||| ||| |||||||||| ||||||| |||| ||| ||||||| || |||||| |||||||||||    
T  51091751 cctcatttacttcgtaaaattttagttgttttaaaaagttatcatatatataaatgtttaaataacacaa 51091820  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #64
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 69
Target Start/End: Original strand, 8847222 - 8847289
Alignment:
Q  1 cctcattttctttgtaaaattttggttgtttcaaaagttgtcatataaatgaatgttcaaataacacaa 69  Q
    ||||||||| |||||||||||||| || |  |||||||||| | ||| ||| |||||||||||||||||    
T  8847222 cctcattttatttgtaaaattttgattatcacaaaagttgt-acatatatggatgttcaaataacacaa 8847289  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 64; Significance: 3e-28; HSPs: 36)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 64; E-Value: 3e-28
Query Start/End: Original strand, 1 - 76
Target Start/End: Complemental strand, 46022226 - 46022151
Alignment:
Q  1 cctcattttctttgtaaaattttggttgtttcaaaagttgtcatataaatgaatgttcaaataacacaactcttaa 76  Q
    ||||||||||||| ||||||||||||||| ||||||||||||||||||||| ||||||||||||||||||||||||    
T  46022226 cctcattttctttataaaattttggttgtctcaaaagttgtcatataaatggatgttcaaataacacaactcttaa 46022151  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 60; E-Value: 9e-26
Query Start/End: Original strand, 1 - 76
Target Start/End: Original strand, 7701656 - 7701731
Alignment:
Q  1 cctcattttctttgtaaaattttggttgtttcaaaagttgtcatataaatgaatgttcaaataacacaactcttaa 76  Q
    ||||||||||||| ||||| ||||||||| ||||||||||||||||||||| ||||||||||||||||||||||||    
T  7701656 cctcattttctttataaaactttggttgtctcaaaagttgtcatataaatggatgttcaaataacacaactcttaa 7701731  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 60; E-Value: 9e-26
Query Start/End: Original strand, 2 - 73
Target Start/End: Complemental strand, 35072320 - 35072249
Alignment:
Q  2 ctcattttctttgtaaaattttggttgtttcaaaagttgtcatataaatgaatgttcaaataacacaactct 73  Q
    |||||||||||| ||||||||||||||||||||||||||||||||||||| ||||||| |||||||||||||    
T  35072320 ctcattttctttataaaattttggttgtttcaaaagttgtcatataaatggatgttcagataacacaactct 35072249  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 59; E-Value: 3e-25
Query Start/End: Original strand, 3 - 73
Target Start/End: Complemental strand, 3614403 - 3614333
Alignment:
Q  3 tcattttctttgtaaaattttggttgtttcaaaagttgtcatataaatgaatgttcaaataacacaactct 73  Q
    ||||| ||||||||||||||||||||||||||||||||||||||||||| |||||||||||||| ||||||    
T  3614403 tcattgtctttgtaaaattttggttgtttcaaaagttgtcatataaatggatgttcaaataacataactct 3614333  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 2 - 73
Target Start/End: Complemental strand, 35098661 - 35098590
Alignment:
Q  2 ctcattttctttgtaaaattttggttgtttcaaaagttgtcatataaatgaatgttcaaataacacaactct 73  Q
    |||||||||| | ||||||||||||||||||||||||||||||||||||| || ||||||||||||||||||    
T  35098661 ctcattttctatataaaattttggttgtttcaaaagttgtcatataaatggatattcaaataacacaactct 35098590  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 54; E-Value: 3e-22
Query Start/End: Original strand, 1 - 78
Target Start/End: Original strand, 40417886 - 40417963
Alignment:
Q  1 cctcattttctttgtaaaattttggttgtttcaaaagttgtcatataaatgaatgttcaaataacacaactcttaata 78  Q
    ||||| ||||||||||||||||||||||| |||||||||||| |||||||  |||||||||||||||||||| |||||    
T  40417886 cctcactttctttgtaaaattttggttgtctcaaaagttgtcgtataaatagatgttcaaataacacaactcataata 40417963  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 5 - 71
Target Start/End: Original strand, 38944913 - 38944979
Alignment:
Q  5 attttctttgtaaaattttggttgtttcaaaagttgtcatataaatgaatgttcaaataacacaact 71  Q
    |||||||||||||||||||| |||| | ||||||||||||||||||||||||| |||||||||||||    
T  38944913 attttctttgtaaaattttgattgtcttaaaagttgtcatataaatgaatgtttaaataacacaact 38944979  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 1 - 72
Target Start/End: Complemental strand, 38956577 - 38956506
Alignment:
Q  1 cctcattttctttgtaaaattttggttgtttcaaaagttgtcatataaatgaatgttcaaataacacaactc 72  Q
    |||||||| ||||||||||||||||||||  |||||||||||| ||| ||| ||||||||||||||||||||    
T  38956577 cctcatttcctttgtaaaattttggttgtcacaaaagttgtcacatatatggatgttcaaataacacaactc 38956506  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 1 - 74
Target Start/End: Complemental strand, 25192876 - 25192803
Alignment:
Q  1 cctcattttctttgtaaaattttggttgtttcaaaagttgtcatataaatgaatgttcaaataacacaactctt 74  Q
    ||||||||||||||||||||||| |||||  |||||||||||| ||  |||||| |||||||||||||||||||    
T  25192876 cctcattttctttgtaaaattttagttgtcacaaaagttgtcacatgtatgaatattcaaataacacaactctt 25192803  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 13 - 70
Target Start/End: Original strand, 32803813 - 32803870
Alignment:
Q  13 tgtaaaattttggttgtttcaaaagttgtcatataaatgaatgttcaaataacacaac 70  Q
    |||||||||||  |||||||||||||||||||||||||| ||||||||||||||||||    
T  32803813 tgtaaaattttaattgtttcaaaagttgtcatataaatggatgttcaaataacacaac 32803870  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 2 - 73
Target Start/End: Original strand, 31445431 - 31445502
Alignment:
Q  2 ctcattttctttgtaaaattttggttgtttcaaaagttgtcatataaatgaatgttcaaataacacaactct 73  Q
    ||||||||||||||||||||||| ||||| ||||| || |||||||||   |||||||||||||||||||||    
T  31445431 ctcattttctttgtaaaattttgattgttgcaaaaattatcatataaaatgatgttcaaataacacaactct 31445502  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 1 - 74
Target Start/End: Complemental strand, 3937082 - 3937009
Alignment:
Q  1 cctcattttctttgtaaaattttggttgtttcaaaagttgtcatataaatgaatgttcaaataacacaactctt 74  Q
    |||||||| |||| |||||||||||||||  |||||||||||| ||  ||| ||||||||||||||||||||||    
T  3937082 cctcatttcctttataaaattttggttgtcacaaaagttgtcacatgtatggatgttcaaataacacaactctt 3937009  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 1 - 74
Target Start/End: Original strand, 43942744 - 43942817
Alignment:
Q  1 cctcattttctttgtaaaattttggttgtttcaaaagttgtcatataaatgaatgttcaaataacacaactctt 74  Q
    ||||||||||||||||||||||||||||   ||||| || ||| ||| ||| ||||||||||||||||||||||    
T  43942744 cctcattttctttgtaaaattttggttgccacaaaaattatcacatatatggatgttcaaataacacaactctt 43942817  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 1 - 73
Target Start/End: Complemental strand, 24614275 - 24614203
Alignment:
Q  1 cctcattttctttgtaaaattttggttgtttcaaaagttgtcatataaatgaatgttcaaataacacaactct 73  Q
    |||||||| ||||||||||||||| || |  |||||||| ||| ||| |||||||||||||||||||||||||    
T  24614275 cctcatttcctttgtaaaattttgattatcacaaaagttatcacatatatgaatgttcaaataacacaactct 24614203  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 2 - 74
Target Start/End: Complemental strand, 33578274 - 33578202
Alignment:
Q  2 ctcattttctttgtaaaattttggttgtttcaaaagttgtcatataaatgaatgttcaaataacacaactctt 74  Q
    |||||||||||||||||||||| |||||| |||| |||||||||||||   |  |||||||||||||||||||    
T  33578274 ctcattttctttgtaaaattttagttgttgcaaaggttgtcatataaaatgacattcaaataacacaactctt 33578202  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 40; E-Value: 0.00000000000007
Query Start/End: Original strand, 2 - 73
Target Start/End: Original strand, 43025453 - 43025524
Alignment:
Q  2 ctcattttctttgtaaaattttggttgtttcaaaagttgtcatataaatgaatgttcaaataacacaactct 73  Q
    ||||||| |||||||||||||| |||||| |||||||||||| ||| ||  |||||| ||||||||||||||    
T  43025453 ctcatttcctttgtaaaattttagttgttacaaaagttgtcacatatatagatgttcgaataacacaactct 43025524  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 40; E-Value: 0.00000000000007
Query Start/End: Original strand, 1 - 72
Target Start/End: Complemental strand, 44895531 - 44895460
Alignment:
Q  1 cctcattttctttgtaaaattttggttgtttcaaaagttgtcatataaatgaatgttcaaataacacaactc 72  Q
    |||||||| ||||||||||||||||||||  |||||||||| | ||| ||| |||||||||||||| |||||    
T  44895531 cctcatttcctttgtaaaattttggttgtcacaaaagttgttacatatatggatgttcaaataacataactc 44895460  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 6 - 72
Target Start/End: Complemental strand, 41989694 - 41989628
Alignment:
Q  6 ttttctttgtaaaattttggttgtttcaaaagttgtcatataaatgaatgttcaaataacacaactc 72  Q
    |||| |||||||||||||||||||  |||||||| ||| ||| ||| ||||||||||||||||||||    
T  41989694 ttttttttgtaaaattttggttgtcacaaaagttatcacatatatggatgttcaaataacacaactc 41989628  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 1 - 77
Target Start/End: Complemental strand, 32529815 - 32529739
Alignment:
Q  1 cctcattttctttgtaaaattttggttgtttcaaaagttgtcatataaatgaatgttcaaataacacaactcttaat 77  Q
    |||||||| ||||||||||||||| ||||  ||||| |||||| ||| ||| ||| ||||||||||||||| |||||    
T  32529815 cctcatttcctttgtaaaattttgattgtcacaaaaattgtcacatatatggatgctcaaataacacaacttttaat 32529739  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 72
Target Start/End: Original strand, 9428528 - 9428599
Alignment:
Q  1 cctcattttctttgtaaaattttggttgtttcaaaagttgtcatataaatgaatgttcaaataacacaactc 72  Q
    ||||||||||||| | |||||||| || | | ||| ||| |||||||||| |||||||||||||||||||||    
T  9428528 cctcattttctttattaaattttgattatctaaaatgttatcatataaataaatgttcaaataacacaactc 9428599  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 2 - 73
Target Start/End: Original strand, 17002450 - 17002520
Alignment:
Q  2 ctcattttctttgtaaaattttggttgtttcaaaagttgtcatataaatgaatgttcaaataacacaactct 73  Q
    |||||||||||| |||||||| ||||||| ||||  ||||||||||||   |||||||||||||||||||||    
T  17002450 ctcattttctttataaaattt-ggttgttgcaaagattgtcatataaaatgatgttcaaataacacaactct 17002520  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 3 - 69
Target Start/End: Original strand, 35207615 - 35207679
Alignment:
Q  3 tcattttctttgtaaaattttggttgtttcaaaagttgtcatataaatgaatgttcaaataacacaa 69  Q
    ||||||| ||||||||||||||||||| |||||  || || |||||||| |||||||||||||||||    
T  35207615 tcattttatttgtaaaattttggttgtctcaaa--ttatcctataaatggatgttcaaataacacaa 35207679  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 73
Target Start/End: Complemental strand, 41189502 - 41189428
Alignment:
Q  1 cctcattttctttgtaaaattttggttgtttcaaaagttgtca--tataaatgaatgttcaaataacacaactct 73  Q
    |||||||| ||||||||||||||| ||||   ||||||| |||  |||| |||||||||||||||||||||||||    
T  41189502 cctcatttcctttgtaaaattttgattgtcataaaagttatcacatatatatgaatgttcaaataacacaactct 41189428  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 5 - 50
Target Start/End: Complemental strand, 22925239 - 22925194
Alignment:
Q  5 attttctttgtaaaattttggttgtttcaaaagttgtcatataaat 50  Q
    |||||| ||||||||||||||||||||||||| |||| ||||||||    
T  22925239 attttccttgtaaaattttggttgtttcaaaaattgtgatataaat 22925194  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 1 - 50
Target Start/End: Complemental strand, 41863588 - 41863539
Alignment:
Q  1 cctcattttctttgtaaaattttggttgtttcaaaagttgtcatataaat 50  Q
    ||||||||| |||||||||||||| |||| | ||||||||||||||||||    
T  41863588 cctcattttatttgtaaaattttgattgtcttaaaagttgtcatataaat 41863539  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 1 - 74
Target Start/End: Original strand, 48062169 - 48062242
Alignment:
Q  1 cctcattttctttgtaaaattttggttgtttcaaaagttgtcatataaatgaatgttcaaataacacaactctt 74  Q
    ||||||||||||| |||||||||| |||| |||||| || |||   ||| | ||||||||||||||||||||||    
T  48062169 cctcattttctttataaaattttgattgtctcaaaaattatcactcaaacggatgttcaaataacacaactctt 48062242  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 6 - 70
Target Start/End: Complemental strand, 10700140 - 10700076
Alignment:
Q  6 ttttctttgtaaaattttggttgtttcaaaagttgtcatataaatgaatgttcaaataacacaac 70  Q
    |||||||| ||||||| |||||||  ||||||||||||   |||||| |||||||||||||||||    
T  10700140 ttttctttataaaattatggttgtcccaaaagttgtcaatcaaatgattgttcaaataacacaac 10700076  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 69
Target Start/End: Original strand, 42553010 - 42553078
Alignment:
Q  1 cctcattttctttgtaaaattttggttgtttcaaaagttgtcatataaatgaatgttcaaataacacaa 69  Q
    |||| |||||||||||||||| ||||| | ||||||||| |||  ||||||  ||||||||||||||||    
T  42553010 cctctttttctttgtaaaattatggttttctcaaaagttatcaattaaatggttgttcaaataacacaa 42553078  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 5 - 73
Target Start/End: Original strand, 46095070 - 46095137
Alignment:
Q  5 attttctttgtaaaattttggttgtttcaaaagttgtcatataaatgaatgttcaaataacacaactct 73  Q
    |||||||||||| | ||||| |||| ||||| ||||||||||||||  || ||||||||||||||||||    
T  46095070 attttctttgtata-ttttgattgtctcaaaggttgtcatataaatagatattcaaataacacaactct 46095137  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 1 - 72
Target Start/End: Complemental strand, 22918128 - 22918057
Alignment:
Q  1 cctcattttctttgtaaaattttggttgtttcaaaagttgtcatataaatgaatgttcaaataacacaactc 72  Q
    |||||||| ||||||||||||||| ||||  |||||||||||| ||  ||| ||| |||||||| |||||||    
T  22918128 cctcatttcctttgtaaaattttgattgtcgcaaaagttgtcacatgtatggatgctcaaataatacaactc 22918057  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 5 - 67
Target Start/End: Complemental strand, 44649283 - 44649221
Alignment:
Q  5 attttctttgtaaaattttggttgtttcaaaagttgtcatataaatgaatgttcaaataacac 67  Q
    ||||||||| ||||||||| ||||| ||||||||||||||  ||||  ||||| |||||||||    
T  44649283 attttctttataaaattttagttgtctcaaaagttgtcatgaaaatagatgtttaaataacac 44649221  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 41 - 74
Target Start/End: Complemental strand, 6522192 - 6522159
Alignment:
Q  41 tcatataaatgaatgttcaaataacacaactctt 74  Q
    |||||||||||| |||||||||||||||||||||    
T  6522192 tcatataaatgattgttcaaataacacaactctt 6522159  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 6 - 67
Target Start/End: Complemental strand, 21822552 - 21822492
Alignment:
Q  6 ttttctttgtaaaattttggttgtttcaaaagttgtcatataaatgaatgttcaaataacac 67  Q
    ||||||||||||| || ||||||||| |||||||||||  ||||||  ||||||||||||||    
T  21822552 ttttctttgtaaa-ttatggttgttttaaaagttgtcaactaaatggttgttcaaataacac 21822492  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 5 - 73
Target Start/End: Original strand, 38347660 - 38347729
Alignment:
Q  5 attttctttgtaaaattttggttgtttcaaaag-ttgtcatataaatgaatgttcaaataacacaactct 73  Q
    |||||||||||||||||||| || | ||||||  || | | ||||||| |||||||||||||||||||||    
T  38347660 attttctttgtaaaattttgattatctcaaaaaattattagataaatgtatgttcaaataacacaactct 38347729  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 26 - 74
Target Start/End: Original strand, 1284551 - 1284599
Alignment:
Q  26 ttgtttcaaaagttgtcatataaatgaatgttcaaataacacaactctt 74  Q
    |||| ||||||||| ||||| |||||  |||||||||||||||||||||    
T  1284551 ttgtatcaaaagttatcataaaaatggttgttcaaataacacaactctt 1284599  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 5 - 73
Target Start/End: Complemental strand, 40112909 - 40112841
Alignment:
Q  5 attttctttgtaaaattttggttgtttcaaaagttgtcatataaatgaatgttcaaataacacaactct 73  Q
    |||| ||||||||||||||| ||||   | ||||||| | ||| ||| |||||||||||||||||||||    
T  40112909 atttcctttgtaaaattttgattgtcagagaagttgttacatatatggatgttcaaataacacaactct 40112841  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 64; Significance: 3e-28; HSPs: 32)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 64; E-Value: 3e-28
Query Start/End: Original strand, 1 - 76
Target Start/End: Original strand, 17626098 - 17626173
Alignment:
Q  1 cctcattttctttgtaaaattttggttgtttcaaaagttgtcatataaatgaatgttcaaataacacaactcttaa 76  Q
    ||||||||||||| ||||||||||||||| ||||||||||||||||||||| ||||||||||||||||||||||||    
T  17626098 cctcattttctttataaaattttggttgtctcaaaagttgtcatataaatggatgttcaaataacacaactcttaa 17626173  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 57; E-Value: 5e-24
Query Start/End: Original strand, 1 - 73
Target Start/End: Original strand, 5168295 - 5168367
Alignment:
Q  1 cctcattttctttgtaaaattttggttgtttcaaaagttgtcatataaatgaatgttcaaataacacaactct 73  Q
    ||||||||||||||||||||||| |||||  |||||||||||||||| |||||||||||||||||||||||||    
T  5168295 cctcattttctttgtaaaattttagttgtcacaaaagttgtcatatatatgaatgttcaaataacacaactct 5168367  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 1 - 72
Target Start/End: Complemental strand, 7287148 - 7287077
Alignment:
Q  1 cctcattttctttgtaaaattttggttgtttcaaaagttgtcatataaatgaatgttcaaataacacaactc 72  Q
    |||||||||||||||||||||||||||||  |||||||||||| ||| ||||||||||||||||||||||||    
T  7287148 cctcattttctttgtaaaattttggttgtcacaaaagttgtcacatatatgaatgttcaaataacacaactc 7287077  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 54; E-Value: 3e-22
Query Start/End: Original strand, 5 - 74
Target Start/End: Original strand, 22972233 - 22972302
Alignment:
Q  5 attttctttgtaaaattttggttgtttcaaaagttgtcatataaatgaatgttcaaataacacaactctt 74  Q
    ||||||||||||||||||| ||||| ||||||||||| ||||||||| ||||||||||||||||||||||    
T  22972233 attttctttgtaaaattttagttgtctcaaaagttgttatataaatggatgttcaaataacacaactctt 22972302  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 52; E-Value: 5e-21
Query Start/End: Original strand, 3 - 74
Target Start/End: Complemental strand, 7552924 - 7552853
Alignment:
Q  3 tcattttctttgtaaaattttggttgtttcaaaagttgtcatataaatgaatgttcaaataacacaactctt 74  Q
    |||||||||||| ||||||||||||||  ||||||||||||| |||||| ||||||||||||||||||||||    
T  7552924 tcattttctttgcaaaattttggttgtcacaaaagttgtcatctaaatggatgttcaaataacacaactctt 7552853  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 52; E-Value: 5e-21
Query Start/End: Original strand, 1 - 72
Target Start/End: Complemental strand, 28306091 - 28306020
Alignment:
Q  1 cctcattttctttgtaaaattttggttgtttcaaaagttgtcatataaatgaatgttcaaataacacaactc 72  Q
    |||||||||||||||||||||||||||||  |||||||||||| ||| ||| ||||||||||||||||||||    
T  28306091 cctcattttctttgtaaaattttggttgtcacaaaagttgtcacatatatggatgttcaaataacacaactc 28306020  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 2 - 76
Target Start/End: Complemental strand, 26791202 - 26791128
Alignment:
Q  2 ctcattttctttgtaaaattttggttgtttcaaaagttgtcatataaatgaatgttcaaataacacaactcttaa 76  Q
    ||||||| ||||||||||||||||||||  |||||||||||| ||| ||| ||||||||||||||||||||||||    
T  26791202 ctcatttcctttgtaaaattttggttgtcacaaaagttgtcacatatatggatgttcaaataacacaactcttaa 26791128  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 50; E-Value: 8e-20
Query Start/End: Original strand, 1 - 74
Target Start/End: Original strand, 8687003 - 8687076
Alignment:
Q  1 cctcattttctttgtaaaattttggttgtttcaaaagttgtcatataaatgaatgttcaaataacacaactctt 74  Q
    |||||||||||||||||||||||| |||||  ||||||||||| ||| ||||||||||||||||||| ||||||    
T  8687003 cctcattttctttgtaaaattttgattgttataaaagttgtcacatatatgaatgttcaaataacactactctt 8687076  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 50; E-Value: 8e-20
Query Start/End: Original strand, 1 - 74
Target Start/End: Complemental strand, 18258752 - 18258679
Alignment:
Q  1 cctcattttctttgtaaaattttggttgtttcaaaagttgtcatataaatgaatgttcaaataacacaactctt 74  Q
    |||||||| ||||||||||||||||||||  |||||||||||| ||| ||| ||||||||||||||||||||||    
T  18258752 cctcatttcctttgtaaaattttggttgtcacaaaagttgtcacatatatggatgttcaaataacacaactctt 18258679  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 49; E-Value: 3e-19
Query Start/End: Original strand, 1 - 73
Target Start/End: Original strand, 3565196 - 3565268
Alignment:
Q  1 cctcattttctttgtaaaattttggttgtttcaaaagttgtcatataaatgaatgttcaaataacacaactct 73  Q
    ||||||||||||||||||||||||||||| |||||||||||||   || || |||||||||||||||||||||    
T  3565196 cctcattttctttgtaaaattttggttgtctcaaaagttgtcactcaagtggatgttcaaataacacaactct 3565268  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 49; E-Value: 3e-19
Query Start/End: Original strand, 2 - 74
Target Start/End: Original strand, 39591793 - 39591865
Alignment:
Q  2 ctcattttctttgtaaaattttggttgtttcaaaagttgtcatataaatgaatgttcaaataacacaactctt 74  Q
    |||||||||||||||||| |||||||||  |||| ||||||||||||||  ||||||||||||||||||||||    
T  39591793 ctcattttctttgtaaaactttggttgtcacaaaggttgtcatataaatagatgttcaaataacacaactctt 39591865  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 49; E-Value: 3e-19
Query Start/End: Original strand, 2 - 74
Target Start/End: Original strand, 39592185 - 39592257
Alignment:
Q  2 ctcattttctttgtaaaattttggttgtttcaaaagttgtcatataaatgaatgttcaaataacacaactctt 74  Q
    |||||||||||||||||| |||||||||  |||| ||||||||||||||  ||||||||||||||||||||||    
T  39592185 ctcattttctttgtaaaactttggttgtcacaaaggttgtcatataaatagatgttcaaataacacaactctt 39592257  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 1 - 72
Target Start/End: Original strand, 33037632 - 33037703
Alignment:
Q  1 cctcattttctttgtaaaattttggttgtttcaaaagttgtcatataaatgaatgttcaaataacacaactc 72  Q
    |||||||| ||||||||||||||||||||  |||||||||||| ||| ||| ||||||||||||||||||||    
T  33037632 cctcatttcctttgtaaaattttggttgtcacaaaagttgtcacatatatggatgttcaaataacacaactc 33037703  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 1 - 75
Target Start/End: Original strand, 1671654 - 1671728
Alignment:
Q  1 cctcattttctttgtaaaattttggttgtttcaaaagttgtcatataaatgaatgttcaaataacacaactctta 75  Q
    |||||||| ||||||||||||||| ||||  |||||||||||| ||| ||| |||||||||||||||||||||||    
T  1671654 cctcatttcctttgtaaaattttgattgtcacaaaagttgtcacatatatggatgttcaaataacacaactctta 1671728  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 1 - 71
Target Start/End: Original strand, 1764336 - 1764406
Alignment:
Q  1 cctcattttctttgtaaaattttggttgtttcaaaagttgtcatataaatgaatgttcaaataacacaact 71  Q
    |||||||| |||| |||||||||||||||  |||||||||||| ||| |||||||||||||||||||||||    
T  1764336 cctcatttcctttctaaaattttggttgtcacaaaagttgtcacatatatgaatgttcaaataacacaact 1764406  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 1 - 74
Target Start/End: Original strand, 13309995 - 13310068
Alignment:
Q  1 cctcattttctttgtaaaattttggttgtttcaaaagttgtcatataaatgaatgttcaaataacacaactctt 74  Q
    ||||||||||||||||||| |||| |||| |||||| ||||||| |||||| ||||||||||||||||| ||||    
T  13309995 cctcattttctttgtaaaaatttgattgtctcaaaaattgtcatctaaatggatgttcaaataacacaattctt 13310068  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 3 - 64
Target Start/End: Complemental strand, 7076525 - 7076464
Alignment:
Q  3 tcattttctttgtaaaattttggttgtttcaaaagttgtcatataaatgaatgttcaaataa 64  Q
    |||||| ||||||||||||||||||||  |||||||||||| ||| ||||||||||||||||    
T  7076525 tcatttcctttgtaaaattttggttgtcacaaaagttgtcacatatatgaatgttcaaataa 7076464  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 2 - 71
Target Start/End: Original strand, 13168635 - 13168704
Alignment:
Q  2 ctcattttctttgtaaaattttggttgtttcaaaagttgtcatataaatgaatgttcaaataacacaact 71  Q
    ||||||| ||||||||||||||| ||||  |||||||||||| ||| ||||||||| |||||||||||||    
T  13168635 ctcatttcctttgtaaaattttgattgtcacaaaagttgtcacatatatgaatgttgaaataacacaact 13168704  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 1 - 74
Target Start/End: Complemental strand, 28467412 - 28467339
Alignment:
Q  1 cctcattttctttgtaaaattttggttgtttcaaaagttgtcatataaatgaatgttcaaataacacaactctt 74  Q
    |||||||| |||| |||||||||||||||  ||||| |||||| ||| ||||||||||| ||||||||||||||    
T  28467412 cctcatttcctttataaaattttggttgtcacaaaaattgtcacatatatgaatgttcagataacacaactctt 28467339  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 10 - 82
Target Start/End: Original strand, 1274479 - 1274550
Alignment:
Q  10 ctttgtaaaattttggttgtttcaaaagttgtcatataaatgaatgttcaaataacacaactcttaatataat 82  Q
    |||||||||||||||||||  | ||||||||||| ||| ||| |||||||||||||||||||||||| |||||    
T  1274479 ctttgtaaaattttggttgcat-aaaagttgtcacatatatggatgttcaaataacacaactcttaaaataat 1274550  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 1 - 73
Target Start/End: Complemental strand, 14051274 - 14051202
Alignment:
Q  1 cctcattttctttgtaaaattttggttgtttcaaaagttgtcatataaatgaatgttcaaataacacaactct 73  Q
    |||||||||||||||||||||||||||||  |||||||| ||| ||| ||| |||||  ||||||||||||||    
T  14051274 cctcattttctttgtaaaattttggttgtcacaaaagttatcacatatatggatgtttgaataacacaactct 14051202  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 3 - 75
Target Start/End: Original strand, 39054701 - 39054773
Alignment:
Q  3 tcattttctttgtaaaattttggttgtttcaaaagttgtcatataaatgaatgttcaaataacacaactctta 75  Q
    |||||||||||| ||||||||| || |  ||||||||||||| |||||| |||||||||||||||||| ||||    
T  39054701 tcattttctttgcaaaattttgattatcacaaaagttgtcatctaaatggatgttcaaataacacaacgctta 39054773  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 40; E-Value: 0.00000000000007
Query Start/End: Original strand, 1 - 72
Target Start/End: Original strand, 41321367 - 41321438
Alignment:
Q  1 cctcattttctttgtaaaattttggttgtttcaaaagttgtcatataaatgaatgttcaaataacacaactc 72  Q
    |||||||| ||||||||||||||||||||  ||||| |||||| ||| ||| || |||||||||||||||||    
T  41321367 cctcatttcctttgtaaaattttggttgtcacaaaaattgtcacatatatggatattcaaataacacaactc 41321438  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 1 - 75
Target Start/End: Original strand, 36739060 - 36739134
Alignment:
Q  1 cctcattttctttgtaaaattttggttgtttcaaaagttgtcatataaatgaatgttcaaataacacaactctta 75  Q
    ||||||||  |||||||||||||||||||  ||||| || ||| ||| ||| |||||||||||||||||||||||    
T  36739060 cctcatttcttttgtaaaattttggttgtcacaaaaattatcacatatatggatgttcaaataacacaactctta 36739134  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 72
Target Start/End: Original strand, 15479581 - 15479652
Alignment:
Q  1 cctcattttctttgtaaaattttggttgtttcaaaagttgtcatataaatgaatgttcaaataacacaactc 72  Q
    ||||||||| |||||||||||||  ||||  |||||||||||| ||  ||| ||||||||||||||||||||    
T  15479581 cctcattttttttgtaaaattttaattgtcacaaaagttgtcacatttatggatgttcaaataacacaactc 15479652  T

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Target: chr5; HSP #26
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 5 - 72
Target Start/End: Original strand, 21156104 - 21156171
Alignment:
Q  5 attttctttgtaaaattttggttgtttcaaaagttgtcatataaatgaatgttcaaataacacaactc 72  Q
    |||||||||||||||||||| ||||| |||  ||| |||||||||   ||||||||||||||||||||    
T  21156104 attttctttgtaaaattttgtttgttgcaagggttatcatataaaatgatgttcaaataacacaactc 21156171  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 10 - 73
Target Start/End: Complemental strand, 35634785 - 35634722
Alignment:
Q  10 ctttgtaaaattttggttgtttcaaaagttgtcatataaatgaatgttcaaataacacaactct 73  Q
    |||||||||||||||||| |   ||||||||||| ||| ||| |||||||||||||||||||||    
T  35634785 ctttgtaaaattttggttatcataaaagttgtcacatatatggatgttcaaataacacaactct 35634722  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 69
Target Start/End: Original strand, 2972436 - 2972504
Alignment:
Q  1 cctcattttctttgtaaaattttggttgtttcaaaagttgtcatataaatgaatgttcaaataacacaa 69  Q
    |||||||| ||| || |||||||| ||||  |||||||||||| ||| || ||||||||||||||||||    
T  2972436 cctcatttccttcgtgaaattttgattgtcacaaaagttgtcacatatataaatgttcaaataacacaa 2972504  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 1 - 72
Target Start/End: Original strand, 14923185 - 14923256
Alignment:
Q  1 cctcattttctttgtaaaattttggttgtttcaaaagttgtcatataaatgaatgttcaaataacacaactc 72  Q
    ||||||||  ||||||||||||||||| |  | |||||||||| ||| ||  ||||||||||||||||||||    
T  14923185 cctcatttcttttgtaaaattttggttttcacgaaagttgtcacatatatcgatgttcaaataacacaactc 14923256  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 6 - 68
Target Start/End: Complemental strand, 24405909 - 24405847
Alignment:
Q  6 ttttctttgtaaaattttggttgtttcaaaagttgtcatataaatgaatgttcaaataacaca 68  Q
    ||||||||||||| || | ||||||||||||||||||| | ||||   |||||||||||||||    
T  24405909 ttttctttgtaaatttatagttgtttcaaaagttgtcaaacaaatagttgttcaaataacaca 24405847  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 1 - 74
Target Start/End: Complemental strand, 33655372 - 33655299
Alignment:
Q  1 cctcattttctttgtaaaattttggttgtttcaaaagttgtcatataaatgaatgttcaaataacacaactctt 74  Q
    ||||||||||||| |||| || |||||||  |||||||| ||||| ||||   | |||||||||||||||||||    
T  33655372 cctcattttctttataaatttatggttgtaccaaaagttatcataaaaatagttattcaaataacacaactctt 33655299  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 6 - 74
Target Start/End: Original strand, 21353261 - 21353329
Alignment:
Q  6 ttttctttgtaaaattttggttgtttcaaaagttgtcatataaatgaatgttcaaataacacaactctt 74  Q
    |||||||||||||||| |||||||  ||||||||||||   |||||  |||| ||||||| ||||||||    
T  21353261 ttttctttgtaaaattatggttgtcccaaaagttgtcaatcaaatggttgtttaaataactcaactctt 21353329  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 64; Significance: 3e-28; HSPs: 57)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 64; E-Value: 3e-28
Query Start/End: Original strand, 1 - 76
Target Start/End: Original strand, 38382433 - 38382508
Alignment:
Q  1 cctcattttctttgtaaaattttggttgtttcaaaagttgtcatataaatgaatgttcaaataacacaactcttaa 76  Q
    ||||||||||||| ||||||||||||||| ||||||||||||||||||||| ||||||||||||||||||||||||    
T  38382433 cctcattttctttataaaattttggttgtctcaaaagttgtcatataaatggatgttcaaataacacaactcttaa 38382508  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 64; E-Value: 3e-28
Query Start/End: Original strand, 1 - 76
Target Start/End: Original strand, 47181953 - 47182028
Alignment:
Q  1 cctcattttctttgtaaaattttggttgtttcaaaagttgtcatataaatgaatgttcaaataacacaactcttaa 76  Q
    ||||||||||||| ||||||||||||||| ||||||||||||||||||||| ||||||||||||||||||||||||    
T  47181953 cctcattttctttataaaattttggttgtctcaaaagttgtcatataaatggatgttcaaataacacaactcttaa 47182028  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 64; E-Value: 3e-28
Query Start/End: Original strand, 1 - 76
Target Start/End: Complemental strand, 48402156 - 48402081
Alignment:
Q  1 cctcattttctttgtaaaattttggttgtttcaaaagttgtcatataaatgaatgttcaaataacacaactcttaa 76  Q
    ||||||||||||| ||||||||||||||| ||||||||||||||||||||| ||||||||||||||||||||||||    
T  48402156 cctcattttctttataaaattttggttgtctcaaaagttgtcatataaatggatgttcaaataacacaactcttaa 48402081  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 60; E-Value: 9e-26
Query Start/End: Original strand, 1 - 76
Target Start/End: Complemental strand, 56364004 - 56363929
Alignment:
Q  1 cctcattttctttgtaaaattttggttgtttcaaaagttgtcatataaatgaatgttcaaataacacaactcttaa 76  Q
    ||||||||||||| ||||||||||||||| |||||||||||||| |||||| ||||||||||||||||||||||||    
T  56364004 cctcattttctttataaaattttggttgtctcaaaagttgtcatgtaaatggatgttcaaataacacaactcttaa 56363929  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 59; E-Value: 3e-25
Query Start/End: Original strand, 2 - 76
Target Start/End: Original strand, 34616674 - 34616748
Alignment:
Q  2 ctcattttctttgtaaaattttggttgtttcaaaagttgtcatataaatgaatgttcaaataacacaactcttaa 76  Q
    |||||||||||| ||||||||||||||| ||||||||||||||||||||  ||||||||||||||||||||||||    
T  34616674 ctcattttctttataaaattttggttgtctcaaaagttgtcatataaatagatgttcaaataacacaactcttaa 34616748  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 58; E-Value: 1e-24
Query Start/End: Original strand, 1 - 82
Target Start/End: Original strand, 44539846 - 44539927
Alignment:
Q  1 cctcattttctttgtaaaattttggttgtttcaaaagttgtcatataaatgaatgttcaaataacacaactcttaatataat 82  Q
    |||||||| ||||||||||||||||||||  |||||||||||| ||| ||||||||||||||||||||||||||||| ||||    
T  44539846 cctcatttcctttgtaaaattttggttgtcacaaaagttgtcacatatatgaatgttcaaataacacaactcttaatttaat 44539927  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 54; E-Value: 3e-22
Query Start/End: Original strand, 1 - 74
Target Start/End: Original strand, 26732337 - 26732410
Alignment:
Q  1 cctcattttctttgtaaaattttggttgtttcaaaagttgtcatataaatgaatgttcaaataacacaactctt 74  Q
    |||||||||||||||||||||||||||||  |||||||||||| ||| ||| ||||||||||||||||||||||    
T  26732337 cctcattttctttgtaaaattttggttgtcacaaaagttgtcacatatatggatgttcaaataacacaactctt 26732410  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 2 - 74
Target Start/End: Original strand, 29175338 - 29175410
Alignment:
Q  2 ctcattttctttgtaaaattttggttgtttcaaaagttgtcatataaatgaatgttcaaataacacaactctt 74  Q
    ||||||| ||||||||||||||||||||  |||||||||||| ||| ||||||||||||||||||||||||||    
T  29175338 ctcatttactttgtaaaattttggttgtcacaaaagttgtcacatatatgaatgttcaaataacacaactctt 29175410  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 52; E-Value: 5e-21
Query Start/End: Original strand, 3 - 74
Target Start/End: Complemental strand, 19473913 - 19473842
Alignment:
Q  3 tcattttctttgtaaaattttggttgtttcaaaagttgtcatataaatgaatgttcaaataacacaactctt 74  Q
    |||||||||||||||||||||| |||| ||||||||||||||||||||| || |||||||||||||| ||||    
T  19473913 tcattttctttgtaaaattttgattgtctcaaaagttgtcatataaatgcatcttcaaataacacaaatctt 19473842  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 50; E-Value: 8e-20
Query Start/End: Original strand, 1 - 74
Target Start/End: Original strand, 51986154 - 51986227
Alignment:
Q  1 cctcattttctttgtaaaattttggttgtttcaaaagttgtcatataaatgaatgttcaaataacacaactctt 74  Q
    |||||||| ||||||||||||||||||||  |||||||||||| ||| ||| ||||||||||||||||||||||    
T  51986154 cctcatttcctttgtaaaattttggttgtcacaaaagttgtcacatatatggatgttcaaataacacaactctt 51986227  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 49; E-Value: 3e-19
Query Start/End: Original strand, 2 - 74
Target Start/End: Complemental strand, 2575748 - 2575676
Alignment:
Q  2 ctcattttctttgtaaaattttggttgtttcaaaagttgtcatataaatgaatgttcaaataacacaactctt 74  Q
    |||||||||||||||||| ||| |||||  |||||||||||||||||||  ||||||||||||||||||||||    
T  2575748 ctcattttctttgtaaaactttagttgtcacaaaagttgtcatataaatagatgttcaaataacacaactctt 2575676  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 1 - 76
Target Start/End: Complemental strand, 23369291 - 23369216
Alignment:
Q  1 cctcattttctttgtaaaattttggttgtttcaaaagttgtcatataaatgaatgttcaaataacacaactcttaa 76  Q
    |||||||| |||||||| |||||||||||  |||||||||||| ||| ||| ||||||||||||||||||||||||    
T  23369291 cctcatttcctttgtaagattttggttgtcacaaaagttgtcacatatatggatgttcaaataacacaactcttaa 23369216  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 2 - 73
Target Start/End: Complemental strand, 27051044 - 27050973
Alignment:
Q  2 ctcattttctttgtaaaattttggttgtttcaaaagttgtcatataaatgaatgttcaaataacacaactct 73  Q
    ||||||||||||||||||||||||||||  |||||||||||| ||  |||||||||||||||||||| ||||    
T  27051044 ctcattttctttgtaaaattttggttgtcacaaaagttgtcacatttatgaatgttcaaataacacatctct 27050973  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 2 - 73
Target Start/End: Complemental strand, 50721702 - 50721631
Alignment:
Q  2 ctcattttctttgtaaaattttggttgtttcaaaagttgtcatataaatgaatgttcaaataacacaactct 73  Q
    |||||||||||||||||||||| |||||| |||| |||||||||||||   |||||||||||||||||||||    
T  50721702 ctcattttctttgtaaaattttagttgttgcaaaggttgtcatataaaatgatgttcaaataacacaactct 50721631  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 1 - 72
Target Start/End: Complemental strand, 53801718 - 53801647
Alignment:
Q  1 cctcattttctttgtaaaattttggttgtttcaaaagttgtcatataaatgaatgttcaaataacacaactc 72  Q
    |||||||| ||||||||||||||||||||  |||||||||||| ||| ||| ||||||||||||||||||||    
T  53801718 cctcatttcctttgtaaaattttggttgtcacaaaagttgtcacatatatggatgttcaaataacacaactc 53801647  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 2 - 72
Target Start/End: Complemental strand, 7632419 - 7632349
Alignment:
Q  2 ctcattttctttgtaaaattttggttgtttcaaaagttgtcatataaatgaatgttcaaataacacaactc 72  Q
    |||||||| |||||||||||||||||||| |||| |||||||||||||   ||||||||||||||||||||    
T  7632419 ctcattttatttgtaaaattttggttgttgcaaaggttgtcatataaaatgatgttcaaataacacaactc 7632349  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 1 - 75
Target Start/End: Original strand, 39478549 - 39478623
Alignment:
Q  1 cctcattttctttgtaaaattttggttgtttcaaaagttgtcatataaatgaatgttcaaataacacaactctta 75  Q
    |||||||||||||||||||||||||||||  |||||||||||||||| ||| ||||| ||  |||||||||||||    
T  39478549 cctcattttctttgtaaaattttggttgtcacaaaagttgtcatatatatggatgtttaataaacacaactctta 39478623  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 1 - 74
Target Start/End: Original strand, 11068800 - 11068873
Alignment:
Q  1 cctcattttctttgtaaaattttggttgtttcaaaagttgtcatataaatgaatgttcaaataacacaactctt 74  Q
    |||||||| |||||||||||||||||||   |||||||||||| ||| ||||||||||||||||||||| ||||    
T  11068800 cctcatttcctttgtaaaattttggttgccacaaaagttgtcacatatatgaatgttcaaataacacaattctt 11068873  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 45; E-Value: 8e-17
Query Start/End: Original strand, 1 - 73
Target Start/End: Complemental strand, 26724931 - 26724859
Alignment:
Q  1 cctcattttctttgtaaaattttggttgtttcaaaagttgtcatataaatgaatgttcaaataacacaactct 73  Q
    |||||||| |||||||||||||| |||||| |||||||| ||| ||| ||| |||||||||||||||||||||    
T  26724931 cctcatttcctttgtaaaattttagttgttacaaaagttatcacatatatggatgttcaaataacacaactct 26724859  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 45; E-Value: 8e-17
Query Start/End: Original strand, 7 - 75
Target Start/End: Original strand, 37297166 - 37297234
Alignment:
Q  7 tttctttgtaaaattttggttgtttcaaaagttgtcatataaatgaatgttcaaataacacaactctta 75  Q
    |||| ||||||||||||||||||  |||||||||||| ||| ||| |||||||||||||||||||||||    
T  37297166 tttccttgtaaaattttggttgtcacaaaagttgtcaaatatatggatgttcaaataacacaactctta 37297234  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 45; E-Value: 8e-17
Query Start/End: Original strand, 13 - 69
Target Start/End: Complemental strand, 49449092 - 49449036
Alignment:
Q  13 tgtaaaattttggttgtttcaaaagttgtcatataaatgaatgttcaaataacacaa 69  Q
    ||||||||||||||||| | ||||||||||||||||||||||||| |||||||||||    
T  49449092 tgtaaaattttggttgtcttaaaagttgtcatataaatgaatgtttaaataacacaa 49449036  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 9 - 72
Target Start/End: Complemental strand, 5233621 - 5233558
Alignment:
Q  9 tctttgtaaaattttggttgtttcaaaagttgtcatataaatgaatgttcaaataacacaactc 72  Q
    |||||||||||||||| |||||||||||||||| | ||||||  ||||||||||||||||||||    
T  5233621 tctttgtaaaattttgattgtttcaaaagttgttacataaatagatgttcaaataacacaactc 5233558  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 3 - 74
Target Start/End: Complemental strand, 10250472 - 10250401
Alignment:
Q  3 tcattttctttgtaaaattttggttgtttcaaaagttgtcatataaatgaatgttcaaataacacaactctt 74  Q
    |||||||||||||||||||||||||||  |||||||||||  ||| ||| ||||||||||||||||| ||||    
T  10250472 tcattttctttgtaaaattttggttgtcacaaaagttgtcgcatatatggatgttcaaataacacaattctt 10250401  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 1 - 72
Target Start/End: Original strand, 15175658 - 15175729
Alignment:
Q  1 cctcattttctttgtaaaattttggttgtttcaaaagttgtcatataaatgaatgttcaaataacacaactc 72  Q
    |||||||| ||||||||||||||||||||  |||||||||||| ||| ||| |||||||||||| |||||||    
T  15175658 cctcatttcctttgtaaaattttggttgtaacaaaagttgtcacatatatggatgttcaaataatacaactc 15175729  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 1 - 72
Target Start/End: Original strand, 39440596 - 39440667
Alignment:
Q  1 cctcattttctttgtaaaattttggttgtttcaaaagttgtcatataaatgaatgttcaaataacacaactc 72  Q
    |||||||| |||| |||||||||| ||||  |||||||||||| ||| ||||||||||||||||||||||||    
T  39440596 cctcatttcctttctaaaattttgattgtcacaaaagttgtcacatatatgaatgttcaaataacacaactc 39440667  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 1 - 72
Target Start/End: Original strand, 46213082 - 46213153
Alignment:
Q  1 cctcattttctttgtaaaattttggttgtttcaaaagttgtcatataaatgaatgttcaaataacacaactc 72  Q
    |||||||| ||||||||||||||||||||| |||||||| ||| ||| ||| || |||||||||||||||||    
T  46213082 cctcatttcctttgtaaaattttggttgttacaaaagttttcacatatatggattttcaaataacacaactc 46213153  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 4 - 74
Target Start/End: Complemental strand, 515601 - 515531
Alignment:
Q  4 cattttctttgtaaaattttggttgtttcaaaagttgtcatataaatgaatgttcaaataacacaactctt 74  Q
    |||||||||| |||| || || || |||||||||||||||||||||| ||| |||||||||||||||||||    
T  515601 cattttctttataaatttatgattatttcaaaagttgtcatataaataaatattcaaataacacaactctt 515531  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 1 - 75
Target Start/End: Original strand, 42853689 - 42853763
Alignment:
Q  1 cctcattttctttgtaaaattttggttgtttcaaaagttgtcatataaatgaatgttcaaataacacaactctta 75  Q
    ||||||||||||| |||||||||| |||| |||||| ||||||   ||||| |||||||||||||||||||||||    
T  42853689 cctcattttctttataaaattttgattgtctcaaaaattgtcactcaaatggatgttcaaataacacaactctta 42853763  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 3 - 72
Target Start/End: Complemental strand, 32130196 - 32130123
Alignment:
Q  3 tcattttctttgtaaaattttggttgtttcaaaagttgtcat----ataaatgaatgttcaaataacacaactc 72  Q
    |||||||||||||| ||||||||||||||||||||||| |||    |||||| |||||| ||||||||||||||    
T  32130196 tcattttctttgtataattttggttgtttcaaaagttgacatataaataaataaatgttgaaataacacaactc 32130123  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 2 - 74
Target Start/End: Original strand, 39195170 - 39195242
Alignment:
Q  2 ctcattttctttgtaaaattttggttgtttcaaaagttgtcatataaatgaatgttcaaataacacaactctt 74  Q
    |||||||||||||||||| |||| || |  |||| ||||||||||||||  ||||||||||||||||||||||    
T  39195170 ctcattttctttgtaaaactttgattatcacaaatgttgtcatataaatagatgttcaaataacacaactctt 39195242  T

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Target: chr4; HSP #31
Raw Score: 40; E-Value: 0.00000000000007
Query Start/End: Original strand, 1 - 72
Target Start/End: Original strand, 43175096 - 43175167
Alignment:
Q  1 cctcattttctttgtaaaattttggttgtttcaaaagttgtcatataaatgaatgttcaaataacacaactc 72  Q
    |||||||| ||||||||||||||| || |  |||||||||||| ||| ||| ||||||||||||||||||||    
T  43175096 cctcatttcctttgtaaaattttgattatcacaaaagttgtcacatatatggatgttcaaataacacaactc 43175167  T

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Target: chr4; HSP #32
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 6 - 64
Target Start/End: Original strand, 3316471 - 3316529
Alignment:
Q  6 ttttctttgtaaaattttggttgtttcaaaagttgtcatataaatgaatgttcaaataa 64  Q
    |||| |||||||||||||| |||| |||||||||||||| |||||| ||||||||||||    
T  3316471 ttttttttgtaaaattttgattgtctcaaaagttgtcatctaaatggatgttcaaataa 3316529  T

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Target: chr4; HSP #33
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 1 - 71
Target Start/End: Complemental strand, 56474726 - 56474656
Alignment:
Q  1 cctcattttctttgtaaaattttggttgtttcaaaagttgtcatataaatgaatgttcaaataacacaact 71  Q
    |||||||||||||||||| |||||||||| |||||| |||| || | |||  |||||||||||||||||||    
T  56474726 cctcattttctttgtaaagttttggttgtctcaaaaattgttatgtgaatagatgttcaaataacacaact 56474656  T

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Target: chr4; HSP #34
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 5 - 74
Target Start/End: Complemental strand, 31641520 - 31641451
Alignment:
Q  5 attttctttgtaaaattttggttgtttcaaaagttgtcatataaatgaatgttcaaataacacaactctt 74  Q
    |||| |||| |||||||||||||||  |||||||| |||  || ||||||||||||||||||||||||||    
T  31641520 atttcctttataaaattttggttgtcacaaaagttatcacgtatatgaatgttcaaataacacaactctt 31641451  T

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Target: chr4; HSP #35
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 1 - 69
Target Start/End: Complemental strand, 24575810 - 24575742
Alignment:
Q  1 cctcattttctttgtaaaattttggttgtttcaaaagttgtcatataaatgaatgttcaaataacacaa 69  Q
    |||||||| |||| |||||||||||||||  |||||||||||| ||| ||  |||||||||||||||||    
T  24575810 cctcatttcctttataaaattttggttgtcacaaaagttgtcacatatatagatgttcaaataacacaa 24575742  T

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Target: chr4; HSP #36
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 1 - 73
Target Start/End: Original strand, 36178018 - 36178090
Alignment:
Q  1 cctcattttctttgtaaaattttggttgtttcaaaagttgtcatataaatgaatgttcaaataacacaactct 73  Q
    |||||||| |||| ||||||||| |||||  |||||||| ||| ||| || ||||||||||||||||||||||    
T  36178018 cctcatttcctttataaaattttagttgtcacaaaagttatcacatatataaatgttcaaataacacaactct 36178090  T

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Target: chr4; HSP #37
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 1 - 77
Target Start/End: Original strand, 39654936 - 39655012
Alignment:
Q  1 cctcattttctttgtaaaattttggttgtttcaaaagttgtcatataaatgaatgttcaaataacacaactcttaat 77  Q
    |||||||||||||||||| || ||||||| | |||| || |||| |||||   ||||||||||||||||||||||||    
T  39654936 cctcattttctttgtaaatttatggttgtcttaaaaattatcatctaaatagttgttcaaataacacaactcttaat 39655012  T

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Target: chr4; HSP #38
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 1 - 73
Target Start/End: Complemental strand, 50831714 - 50831642
Alignment:
Q  1 cctcattttctttgtaaaattttggttgtttcaaaagttgtcatataaatgaatgttcaaataacacaactct 73  Q
    |||| |||||||||||||||| |||||||  ||||||||||||   |||||  ||||||||||||||||||||    
T  50831714 cctctttttctttgtaaaattatggttgtcccaaaagttgtcaatcaaatggttgttcaaataacacaactct 50831642  T

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Target: chr4; HSP #39
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 3 - 74
Target Start/End: Original strand, 26492121 - 26492192
Alignment:
Q  3 tcattttctttgtaaaattttggttgtttcaaaagttgtcatataaatgaatgttcaaataacacaactctt 74  Q
    |||||| ||||||||||||||| ||||  ||||| |||||| ||| ||  ||||||||||||||||||||||    
T  26492121 tcatttcctttgtaaaattttgattgtcacaaaaattgtcacatatatagatgttcaaataacacaactctt 26492192  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 64
Target Start/End: Original strand, 38134465 - 38134528
Alignment:
Q  1 cctcattttctttgtaaaattttggttgtttcaaaagttgtcatataaatgaatgttcaaataa 64  Q
    |||||||| |||||||||||||||||| |  |||||||||||| ||  ||||||||||||||||    
T  38134465 cctcatttcctttgtaaaattttggttatcacaaaagttgtcacatgtatgaatgttcaaataa 38134528  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 6 - 76
Target Start/End: Complemental strand, 19232088 - 19232018
Alignment:
Q  6 ttttctttgtaaaattttggttgtttcaaaagttgtcatataaatgaatgttcaaataacacaactcttaa 76  Q
    ||||||||| ||||||||||||||   |||| |||||| |||| ||  |||||||||||||||||||||||    
T  19232088 ttttctttgcaaaattttggttgtactaaaaattgtcacataattggttgttcaaataacacaactcttaa 19232018  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 3 - 57
Target Start/End: Complemental strand, 27354311 - 27354257
Alignment:
Q  3 tcattttctttgtaaaattttggttgtttcaaaagttgtcatataaatgaatgtt 57  Q
    ||||||| ||||||||||||||||||| | |||| |||||||||||||| |||||    
T  27354311 tcattttttttgtaaaattttggttgtcttaaaatttgtcatataaatggatgtt 27354257  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 15 - 73
Target Start/End: Original strand, 27965111 - 27965169
Alignment:
Q  15 taaaattttggttgtttcaaaagttgtcatataaatgaatgttcaaataacacaactct 73  Q
    |||||||||||||||  || ||||||||| ||| ||| |||||||||||||||||||||    
T  27965111 taaaattttggttgtcacagaagttgtcacatatatggatgttcaaataacacaactct 27965169  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 2 - 72
Target Start/End: Complemental strand, 38376448 - 38376378
Alignment:
Q  2 ctcattttctttgtaaaattttggttgtttcaaaagttgtcatataaatgaatgttcaaataacacaactc 72  Q
    ||||||||||||||||||||||| ||||  ||||| || ||| ||| ||  ||||||||||||||||||||    
T  38376448 ctcattttctttgtaaaattttgattgtcacaaaaattatcacatatatagatgttcaaataacacaactc 38376378  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 1 - 74
Target Start/End: Original strand, 37997366 - 37997439
Alignment:
Q  1 cctcattttctttgtaaaattttggttgtttcaaaagttgtcatataaatgaatgttcaaataacacaactctt 74  Q
    |||||||||||||||||||||||||||||  ||||| || ||| ||| ||  ||||||||||| |||| |||||    
T  37997366 cctcattttctttgtaaaattttggttgtaacaaaaattatcacatatatagatgttcaaatagcacagctctt 37997439  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 1 - 69
Target Start/End: Complemental strand, 31995874 - 31995804
Alignment:
Q  1 cctcattttctttgtaaaattttggttgtttcaaaagttgt--catataaatgaatgttcaaataacacaa 69  Q
    ||||||||||||| |||||||||  |||| |||||||||||   |||||||||  ||||||||||||||||    
T  31995874 cctcattttctttctaaaattttaattgtctcaaaagttgttatatataaatggttgttcaaataacacaa 31995804  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 3 - 78
Target Start/End: Original strand, 39606086 - 39606161
Alignment:
Q  3 tcattttctttgtaaaattttggttgtttcaaaagttgtcatataaatgaatgttcaaataacacaactcttaata 78  Q
    |||||| |||| ||||||||||||| |   ||||||||||| ||| || ||||||||||||| ||||||| |||||    
T  39606086 tcatttcctttataaaattttggttatcgtaaaagttgtcacatatataaatgttcaaataatacaactcataata 39606161  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 1 - 72
Target Start/End: Original strand, 42491186 - 42491257
Alignment:
Q  1 cctcattttctttgtaaaattttggttgtttcaaaagttgtcatataaatgaatgttcaaataacacaactc 72  Q
    |||| |||||||||| ||||| |||||||  ||||||||||||   |||||  |||||||||||||||||||    
T  42491186 cctctttttctttgtgaaattatggttgtcccaaaagttgtcaatcaaatggttgttcaaataacacaactc 42491257  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 3 - 66
Target Start/End: Original strand, 45083086 - 45083149
Alignment:
Q  3 tcattttctttgtaaaattttggttgtttcaaaagttgtcatataaatgaatgttcaaataaca 66  Q
    ||||||||||| |||||||||| ||||   ||||||||||| ||| ||| ||||||||||||||    
T  45083086 tcattttctttataaaattttgattgtaataaaagttgtcacatatatggatgttcaaataaca 45083149  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 23 - 74
Target Start/End: Original strand, 54974605 - 54974656
Alignment:
Q  23 tggttgtttcaaaagttgtcatataaatgaatgttcaaataacacaactctt 74  Q
    ||||||||  |||| ||||||||||||||| ||||||||||||||| |||||    
T  54974605 tggttgttctaaaaattgtcatataaatgattgttcaaataacacatctctt 54974656  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 6 - 68
Target Start/End: Original strand, 14603574 - 14603636
Alignment:
Q  6 ttttctttgtaaaattttggttgtttcaaaagttgtcatataaatgaatgttcaaataacaca 68  Q
    |||||||| |||| || ||||||| |||||| |||||||  |||||| |||||||||||||||    
T  14603574 ttttctttataaatttatggttgtctcaaaaattgtcatggaaatgattgttcaaataacaca 14603636  T

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Target: chr4; HSP #52
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 32 - 74
Target Start/End: Original strand, 32866413 - 32866455
Alignment:
Q  32 caaaagttgtcatataaatgaatgttcaaataacacaactctt 74  Q
    |||||||||||||  |||||| |||||||||||||||||||||    
T  32866413 caaaagttgtcattaaaatgattgttcaaataacacaactctt 32866455  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #53
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 73
Target Start/End: Original strand, 5622570 - 5622642
Alignment:
Q  1 cctcattttctttgtaaaattttggttgtttcaaaagttgtcatataaatgaatgttcaaataacacaactct 73  Q
    |||||||| |||||||||||||| ||| |  |||||||||| | ||| ||  || ||||||||||||||||||    
T  5622570 cctcatttcctttgtaaaattttagttatcacaaaagttgtgacatatatagatcttcaaataacacaactct 5622642  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #54
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 6 - 74
Target Start/End: Complemental strand, 10474066 - 10473998
Alignment:
Q  6 ttttctttgtaaaattttggttgtttcaaaagttgtcatataaatgaatgttcaaataacacaactctt 74  Q
    ||||||||||||| || |||||||   ||||||||| || ||||||| ||||||||| ||| |||||||    
T  10474066 ttttctttgtaaatttatggttgtcataaaagttgtaatctaaatgagtgttcaaattacaaaactctt 10473998  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #55
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 5 - 73
Target Start/End: Complemental strand, 19174729 - 19174661
Alignment:
Q  5 attttctttgtaaaattttggttgtttcaaaagttgtcatataaatgaatgttcaaataacacaactct 73  Q
    |||||||||||||| || || |||| ||||||||||||| | || ||  ||||||||||||||| ||||    
T  19174729 attttctttgtaaatttatgtttgtctcaaaagttgtcacacaattggttgttcaaataacacatctct 19174661  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #56
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 6 - 74
Target Start/End: Original strand, 27371258 - 27371326
Alignment:
Q  6 ttttctttgtaaaattttggttgtttcaaaagttgtcatataaatgaatgttcaaataacacaactctt 74  Q
    ||||||||||||| || ||||||| ||| ||||| ||| ||||||   ||||||||||||||| |||||    
T  27371258 ttttctttgtaaatttatggttgtctcataagttctcaaataaattgttgttcaaataacacacctctt 27371326  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #57
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 17 - 69
Target Start/End: Original strand, 46283058 - 46283109
Alignment:
Q  17 aaattttggttgtttcaaaagttgtcatataaatgaatgttcaaataacacaa 69  Q
    |||||||  |||| ||||||||||||||||||||| ||||| |||||||||||    
T  46283058 aaattttaattgtctcaaaagttgtcatataaatggatgtt-aaataacacaa 46283109  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 63; Significance: 1e-27; HSPs: 54)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 63; E-Value: 1e-27
Query Start/End: Original strand, 2 - 76
Target Start/End: Complemental strand, 3097819 - 3097745
Alignment:
Q  2 ctcattttctttgtaaaattttggttgtttcaaaagttgtcatataaatgaatgttcaaataacacaactcttaa 76  Q
    |||||||||||| ||||||||||||||| ||||||||||||||||||||| ||||||||||||||||||||||||    
T  3097819 ctcattttctttataaaattttggttgtctcaaaagttgtcatataaatggatgttcaaataacacaactcttaa 3097745  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 60; E-Value: 9e-26
Query Start/End: Original strand, 1 - 76
Target Start/End: Complemental strand, 25270541 - 25270466
Alignment:
Q  1 cctcattttctttgtaaaattttggttgtttcaaaagttgtcatataaatgaatgttcaaataacacaactcttaa 76  Q
    ||||||||||||| ||||||||||||||| || |||||||||||||||||| ||||||||||||||||||||||||    
T  25270541 cctcattttctttataaaattttggttgtctcgaaagttgtcatataaatggatgttcaaataacacaactcttaa 25270466  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 60; E-Value: 9e-26
Query Start/End: Original strand, 1 - 76
Target Start/End: Complemental strand, 41056706 - 41056631
Alignment:
Q  1 cctcattttctttgtaaaattttggttgtttcaaaagttgtcatataaatgaatgttcaaataacacaactcttaa 76  Q
    ||||||||||||| ||||||||||||||| ||||||||||||||||||||| ||||||||||||||||||| ||||    
T  41056706 cctcattttctttataaaattttggttgtctcaaaagttgtcatataaatggatgttcaaataacacaactattaa 41056631  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 58; E-Value: 1e-24
Query Start/End: Original strand, 3 - 76
Target Start/End: Complemental strand, 13333127 - 13333054
Alignment:
Q  3 tcattttctttgtaaaattttggttgtttcaaaagttgtcatataaatgaatgttcaaataacacaactcttaa 76  Q
    ||||||||||| ||||||||||||||| ||||||||||||||||||||  ||||||||||||||||||||||||    
T  13333127 tcattttctttataaaattttggttgtctcaaaagttgtcatataaatcgatgttcaaataacacaactcttaa 13333054  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 52; E-Value: 5e-21
Query Start/End: Original strand, 1 - 76
Target Start/End: Original strand, 43487491 - 43487566
Alignment:
Q  1 cctcattttctttgtaaaattttggttgtttcaaaagttgtcatataaatgaatgttcaaataacacaactcttaa 76  Q
    |||||||| ||||||||||||||||||||| ||||| |||||| ||| ||| ||||||||||||||||||||||||    
T  43487491 cctcatttcctttgtaaaattttggttgttacaaaaattgtcacatatatggatgttcaaataacacaactcttaa 43487566  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 50; E-Value: 8e-20
Query Start/End: Original strand, 1 - 74
Target Start/End: Original strand, 32477444 - 32477517
Alignment:
Q  1 cctcattttctttgtaaaattttggttgtttcaaaagttgtcatataaatgaatgttcaaataacacaactctt 74  Q
    |||||||| |||||| |||||||||||||  |||||||||||| ||| ||||||||||||||||||||||||||    
T  32477444 cctcatttcctttgtcaaattttggttgtcacaaaagttgtcacatatatgaatgttcaaataacacaactctt 32477517  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 50; E-Value: 8e-20
Query Start/End: Original strand, 1 - 74
Target Start/End: Complemental strand, 42421857 - 42421784
Alignment:
Q  1 cctcattttctttgtaaaattttggttgtttcaaaagttgtcatataaatgaatgttcaaataacacaactctt 74  Q
    |||||||| |||| |||||||||||||||  |||||||||||| ||| ||||||||||||||||||||||||||    
T  42421857 cctcatttcctttctaaaattttggttgtcacaaaagttgtcacatatatgaatgttcaaataacacaactctt 42421784  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 49; E-Value: 3e-19
Query Start/End: Original strand, 2 - 74
Target Start/End: Complemental strand, 18254167 - 18254095
Alignment:
Q  2 ctcattttctttgtaaaattttggttgtttcaaaagttgtcatataaatgaatgttcaaataacacaactctt 74  Q
    ||||||| ||||||||||||||||||||  |||||||||||| ||| ||| ||||||||||||||||||||||    
T  18254167 ctcatttcctttgtaaaattttggttgtcacaaaagttgtcacatatatggatgttcaaataacacaactctt 18254095  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 1 - 76
Target Start/End: Original strand, 2076681 - 2076756
Alignment:
Q  1 cctcattttctttgtaaaattttggttgtttcaaaagttgtcatataaatgaatgttcaaataacacaactcttaa 76  Q
    |||||||||||||||||||||||||||||  |||||||||||| ||  ||  ||||||||||||||||||||||||    
T  2076681 cctcattttctttgtaaaattttggttgtcacaaaagttgtcacatctattgatgttcaaataacacaactcttaa 2076756  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 2 - 73
Target Start/End: Original strand, 41195697 - 41195768
Alignment:
Q  2 ctcattttctttgtaaaattttggttgtttcaaaagttgtcatataaatgaatgttcaaataacacaactct 73  Q
    ||||||| ||||||||||||||||||||  |||||||||| | ||| |||||||||||||||||||||||||    
T  41195697 ctcatttcctttgtaaaattttggttgtcacaaaagttgttacatatatgaatgttcaaataacacaactct 41195768  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 3 - 73
Target Start/End: Complemental strand, 27490687 - 27490617
Alignment:
Q  3 tcattttctttgtaaaattttggttgtttcaaaagttgtcatataaatgaatgttcaaataacacaactct 73  Q
    |||||||||||||||||||||| ||||  |||||||||||||  ||||| |||||||||||||||||||||    
T  27490687 tcattttctttgtaaaattttgattgtcacaaaagttgtcatcaaaatggatgttcaaataacacaactct 27490617  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 1 - 74
Target Start/End: Complemental strand, 22888776 - 22888703
Alignment:
Q  1 cctcattttctttgtaaaattttggttgtttcaaaagttgtcatataaatgaatgttcaaataacacaactctt 74  Q
    |||||||| ||||||||||||||| ||||  |||||||||||| ||| ||| ||||||||||||||||||||||    
T  22888776 cctcatttcctttgtaaaattttgattgtcacaaaagttgtcacatatatggatgttcaaataacacaactctt 22888703  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 45; E-Value: 8e-17
Query Start/End: Original strand, 2 - 74
Target Start/End: Original strand, 1352502 - 1352574
Alignment:
Q  2 ctcattttctttgtaaaattttggttgtttcaaaagttgtcatataaatgaatgttcaaataacacaactctt 74  Q
    |||||||||||||||||||||| |||||| |||| ||||| |||||||   ||||||||||||||||||||||    
T  1352502 ctcattttctttgtaaaattttagttgttgcaaaggttgttatataaaatgatgttcaaataacacaactctt 1352574  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 3 - 74
Target Start/End: Original strand, 9647246 - 9647317
Alignment:
Q  3 tcattttctttgtaaaattttggttgtttcaaaagttgtcatataaatgaatgttcaaataacacaactctt 74  Q
    |||||| ||||||||||||||||||||  |||||||| ||  ||| ||||||||||||||||||||||||||    
T  9647246 tcatttcctttgtaaaattttggttgtcacaaaagttatcgcatatatgaatgttcaaataacacaactctt 9647317  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 1 - 74
Target Start/End: Original strand, 9194353 - 9194426
Alignment:
Q  1 cctcattttctttgtaaaattttggttgtttcaaaagttgtcatataaatgaatgttcaaataacacaactctt 74  Q
    ||||||||  |||||||||||||||||||  ||||| |||| | ||| ||||||||||||||||||||||||||    
T  9194353 cctcatttcttttgtaaaattttggttgtcacaaaaattgttacatatatgaatgttcaaataacacaactctt 9194426  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 3 - 68
Target Start/End: Original strand, 19642712 - 19642777
Alignment:
Q  3 tcattttctttgtaaaattttggttgtttcaaaagttgtcatataaatgaatgttcaaataacaca 68  Q
    |||||||||||| |||||| ||||||| ||||||||| ||||||||||| ||||| ||||||||||    
T  19642712 tcattttctttgcaaaattgtggttgtctcaaaagttctcatataaatggatgtttaaataacaca 19642777  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 1 - 69
Target Start/End: Complemental strand, 6049304 - 6049236
Alignment:
Q  1 cctcattttctttgtaaaattttggttgtttcaaaagttgtcatataaatgaatgttcaaataacacaa 69  Q
    |||||||| ||||||||||||||| ||||  |||||||||||| ||| ||| |||||||||||||||||    
T  6049304 cctcatttcctttgtaaaattttgattgtcacaaaagttgtcacatatatggatgttcaaataacacaa 6049236  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 40; E-Value: 0.00000000000007
Query Start/End: Original strand, 11 - 74
Target Start/End: Complemental strand, 21611604 - 21611541
Alignment:
Q  11 tttgtaaaattttggttgtttcaaaagttgtcatataaatgaatgttcaaataacacaactctt 74  Q
    |||||||||||||||||||   ||||||||||| ||| ||| ||||||||||||||||||||||    
T  21611604 tttgtaaaattttggttgtcataaaagttgtcacatatatggatgttcaaataacacaactctt 21611541  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 40; E-Value: 0.00000000000007
Query Start/End: Original strand, 2 - 73
Target Start/End: Complemental strand, 37737929 - 37737858
Alignment:
Q  2 ctcattttctttgtaaaattttggttgtttcaaaagttgtcatataaatgaatgttcaaataacacaactct 73  Q
    ||||||| ||||||||| ||||||||||  |||||||||||| ||| ||| | |||||||||||||||||||    
T  37737929 ctcatttcctttgtaaagttttggttgtcacaaaagttgtcacatatatggacgttcaaataacacaactct 37737858  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 1 - 75
Target Start/End: Original strand, 1248798 - 1248872
Alignment:
Q  1 cctcattttctttgtaaaattttggttgtttcaaaagttgtcatataaatgaatgttcaaataacacaactctta 75  Q
    |||||||| ||||||||||||||  || |  |||||||||||| ||| ||| |||||||||||||||||||||||    
T  1248798 cctcatttcctttgtaaaattttaattatcacaaaagttgtcacatatatggatgttcaaataacacaactctta 1248872  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 5 - 71
Target Start/End: Original strand, 29349622 - 29349688
Alignment:
Q  5 attttctttgtaaaattttggttgtttcaaaagttgtcatataaatgaatgttcaaataacacaact 71  Q
    |||||||||||||||||||| ||||  ||||||||||||| |||||| ||||| |||||||| ||||    
T  29349622 attttctttgtaaaattttgattgtcacaaaagttgtcatctaaatggatgttgaaataacataact 29349688  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 2 - 72
Target Start/End: Original strand, 44654737 - 44654807
Alignment:
Q  2 ctcattttctttgtaaaattttggttgtttcaaaagttgtcatataaatgaatgttcaaataacacaactc 72  Q
    |||||||||||| ||||||||| ||||| | ||||||| |||||||||| | | |||||||||||||||||    
T  44654737 ctcattttctttataaaattttagttgtcttaaaagttatcatataaattatttttcaaataacacaactc 44654807  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 1 - 74
Target Start/End: Original strand, 9760130 - 9760203
Alignment:
Q  1 cctcattttctttgtaaaattttggttgtttcaaaagttgtcatataaatgaatgttcaaataacacaactctt 74  Q
    |||||||| ||| | ||||||||||||||  |||||||||||| ||| ||  ||||||||||||||||||||||    
T  9760130 cctcatttccttggaaaaattttggttgtcacaaaagttgtcacatatatagatgttcaaataacacaactctt 9760203  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 26 - 75
Target Start/End: Complemental strand, 17767978 - 17767929
Alignment:
Q  26 ttgtttcaaaagttgtcatataaatgaatgttcaaataacacaactctta 75  Q
    |||| |||||||||||| || |||||||||||||||||||||||||||||    
T  17767978 ttgtctcaaaagttgtcgtaaaaatgaatgttcaaataacacaactctta 17767929  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 26 - 75
Target Start/End: Complemental strand, 42340689 - 42340640
Alignment:
Q  26 ttgtttcaaaagttgtcatataaatgaatgttcaaataacacaactctta 75  Q
    ||||||||||||||||| |||||||  |||||||||||||||||||||||    
T  42340689 ttgtttcaaaagttgtcctataaatagatgttcaaataacacaactctta 42340640  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 11 - 73
Target Start/End: Original strand, 136049 - 136108
Alignment:
Q  11 tttgtaaaattttggttgtttcaaaagttgtcatataaatgaatgttcaaataacacaactct 73  Q
    ||||||||||||| ||||| ||||||||   |||||||||| |||||||||||||||||||||    
T  136049 tttgtaaaattttagttgtctcaaaagt---catataaatggatgttcaaataacacaactct 136108  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 3 - 75
Target Start/End: Complemental strand, 8848654 - 8848582
Alignment:
Q  3 tcattttctttgtaaaattttggttgtttcaaaagttgtcatataaatgaatgttcaaataacacaactctta 75  Q
    |||||||||||| ||||||||| ||||  ||||| || |||| |||||  |||||||||||||||||||||||    
T  8848654 tcattttctttgcaaaattttgattgtcacaaaaattatcatctaaatagatgttcaaataacacaactctta 8848582  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 2 - 74
Target Start/End: Complemental strand, 16973719 - 16973647
Alignment:
Q  2 ctcattttctttgtaaaattttggttgtttcaaaagttgtcatataaatgaatgttcaaataacacaactctt 74  Q
    |||||||| ||||||||||||||||||| |||| |||||||  ||||||  ||||| |||||||| |||||||    
T  16973719 ctcattttatttgtaaaattttggttgtatcaatagttgtccaataaatagatgtttaaataacaaaactctt 16973647  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 6 - 73
Target Start/End: Complemental strand, 1907717 - 1907650
Alignment:
Q  6 ttttctttgtaaaattttggttgtttcaaaagttgtcatataaatgaatgttcaaataacacaactct 73  Q
    ||||||||||||| || |||||||   | |||||||||| ||||||| ||||||||||||||||||||    
T  1907717 ttttctttgtaaatttatggttgtcatacaagttgtcatctaaatgattgttcaaataacacaactct 1907650  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 3 - 74
Target Start/End: Original strand, 9990805 - 9990876
Alignment:
Q  3 tcattttctttgtaaaattttggttgtttcaaaagttgtcatataaatgaatgttcaaataacacaactctt 74  Q
    |||||| ||||||||||||||  ||||  |||||||| ||| ||| ||| ||||||||||||||||||||||    
T  9990805 tcatttcctttgtaaaattttaattgtcacaaaagttatcacatatatggatgttcaaataacacaactctt 9990876  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 17 - 72
Target Start/End: Original strand, 42434247 - 42434302
Alignment:
Q  17 aaattttggttgtttcaaaagttgtcatataaatgaatgttcaaataacacaactc 72  Q
    |||||||| | || ||||||||||||||||||||  ||||||||||||||||||||    
T  42434247 aaattttgatcgtctcaaaagttgtcatataaatagatgttcaaataacacaactc 42434302  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 6 - 68
Target Start/End: Complemental strand, 3412508 - 3412446
Alignment:
Q  6 ttttctttgtaaaattttggttgtttcaaaagttgtcatataaatgaatgttcaaataacaca 68  Q
    ||||||||||||| || ||||||||||||||||||||| ||||||   |||||||| ||||||    
T  3412508 ttttctttgtaaatttatggttgtttcaaaagttgtcacataaatagttgttcaaacaacaca 3412446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 1 - 71
Target Start/End: Original strand, 9207702 - 9207772
Alignment:
Q  1 cctcattttctttgtaaaattttggttgtttcaaaagttgtcatataaatgaatgttcaaataacacaact 71  Q
    |||||||| ||||||||||||||||||||  ||||| || ||| ||| ||  |||||||||||||||||||    
T  9207702 cctcatttcctttgtaaaattttggttgtcacaaaaattatcacatatatagatgttcaaataacacaact 9207772  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 1 - 71
Target Start/End: Complemental strand, 34945049 - 34944979
Alignment:
Q  1 cctcattttctttgtaaaattttggttgtttcaaaagttgtcatataaatgaatgttcaaataacacaact 71  Q
    ||||||||  |||||||||||||||||||  | |||||||||| ||| |||||| ||||| ||||||||||    
T  34945049 cctcatttcttttgtaaaattttggttgtcacgaaagttgtcacatatatgaatattcaattaacacaact 34944979  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 6 - 67
Target Start/End: Original strand, 42430767 - 42430828
Alignment:
Q  6 ttttctttgtaaaattttggttgtttcaaaagttgtcatataaatgaatgttcaaataacac 67  Q
    ||||||||||||| || |||||||| |||||||||||| | |||||  ||||||||||||||    
T  42430767 ttttctttgtaaacttatggttgttccaaaagttgtcacacaaatggttgttcaaataacac 42430828  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 5 - 74
Target Start/End: Original strand, 44050131 - 44050200
Alignment:
Q  5 attttctttgtaaaattttggttgtttcaaaagttgtcatataaatgaatgttcaaataacacaactctt 74  Q
    |||||||||||||| || ||||||| ||||||||||||  | |||||  ||||||||||||||| |||||    
T  44050131 attttctttgtaaatttatggttgtctcaaaagttgtcgcacaaatggttgttcaaataacacacctctt 44050200  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 2 - 74
Target Start/End: Original strand, 41042367 - 41042439
Alignment:
Q  2 ctcattttctttgtaaaattttggttgtttcaaaagttgtcatataaatgaatgttcaaataacacaactctt 74  Q
    ||||||| |||| |||||||||||||||   |||| |||||| ||| ||| |||||||||||||| |||||||    
T  41042367 ctcatttcctttataaaattttggttgtcataaaaattgtcacatatatggatgttcaaataacagaactctt 41042439  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 33 - 72
Target Start/End: Original strand, 44219367 - 44219406
Alignment:
Q  33 aaaagttgtcatataaatgaatgttcaaataacacaactc 72  Q
    ||||||||||||||||||| |||||||||| |||||||||    
T  44219367 aaaagttgtcatataaatggatgttcaaatgacacaactc 44219406  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 6 - 68
Target Start/End: Original strand, 9521925 - 9521987
Alignment:
Q  6 ttttctttgtaaaattttggttgtttcaaaagttgtcatataaatgaatgttcaaataacaca 68  Q
    ||||||||||||| || ||||||| ||||||||| ||| | |||| ||| |||||||||||||    
T  9521925 ttttctttgtaaatttatggttgtctcaaaagttatcacacaaataaatattcaaataacaca 9521987  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 6 - 68
Target Start/End: Original strand, 14255420 - 14255482
Alignment:
Q  6 ttttctttgtaaaattttggttgtttcaaaagttgtcatataaatgaatgttcaaataacaca 68  Q
    ||||||||||||| || |||||||  |||||||||||  |||||||  |||||||||||||||    
T  14255420 ttttctttgtaaatttatggttgtcccaaaagttgtcgcataaatggttgttcaaataacaca 14255482  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 3 - 73
Target Start/End: Original strand, 18846725 - 18846795
Alignment:
Q  3 tcattttctttgtaaaattttggttgtttcaaaagttgtcatataaatgaatgttcaaataacacaactct 73  Q
    ||||||| |||| ||||||||| ||||   |||| ||||||| |||||| |||||||||||||| ||||||    
T  18846725 tcattttttttgcaaaattttgattgtcataaaaattgtcatctaaatggatgttcaaataacataactct 18846795  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #42
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 5 - 71
Target Start/End: Original strand, 28494976 - 28495042
Alignment:
Q  5 attttctttgtaaaattttggttgtttcaaaagttgtcatataaatgaatgttcaaataacacaact 71  Q
    ||||||| |||||| || |||||||  |||||||||| || ||||||  ||||||||||||||||||    
T  28494976 attttctgtgtaaatttatggttgtcacaaaagttgtaatttaaatggttgttcaaataacacaact 28495042  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #43
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 6 - 72
Target Start/End: Original strand, 32701207 - 32701273
Alignment:
Q  6 ttttctttgtaaaattttggttgtttcaaaagttgtcatataaatgaatgttcaaataacacaactc 72  Q
    |||| |||||||| || ||||||   |||||||| |||||||||||  |||||||||||||||||||    
T  32701207 ttttttttgtaaacttatggttgccccaaaagttatcatataaatggttgttcaaataacacaactc 32701273  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #44
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 3 - 72
Target Start/End: Complemental strand, 3838837 - 3838768
Alignment:
Q  3 tcattttctttgtaaaattttggttgtttcaaaagttgtcatataaatgaatgttcaaataacacaactc 72  Q
    |||||| ||||||||||||||  || |  |||||||||||| ||| ||  ||||||||||||||||||||    
T  3838837 tcatttcctttgtaaaattttaattatcacaaaagttgtcacatatatagatgttcaaataacacaactc 3838768  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #45
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 7 - 72
Target Start/End: Original strand, 31415028 - 31415093
Alignment:
Q  7 tttctttgtaaaattttggttgtttcaaaagttgtcatataaatgaatgttcaaataacacaactc 72  Q
    ||||||| ||||||| ||||||| ||||||||| |||   |||||| ||||||||||| |||||||    
T  31415028 tttctttttaaaattatggttgtctcaaaagttatcaataaaatgattgttcaaataatacaactc 31415093  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #46
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 2 - 75
Target Start/End: Complemental strand, 33273545 - 33273472
Alignment:
Q  2 ctcattttctttgtaaaattttggttgtttcaaaagttgtcatataaatgaatgttcaaataacacaactctta 75  Q
    |||||||||||| ||||||||||||||||| |||| || || |||||||  |||  |||||| || ||||||||    
T  33273545 ctcattttctttataaaattttggttgtttaaaaaattatcgtataaatagatgagcaaatatcataactctta 33273472  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #47
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 6 - 74
Target Start/End: Complemental strand, 5054126 - 5054058
Alignment:
Q  6 ttttctttgtaaaattttggttgtttcaaaagttgtcatataaatgaatgttcaaataacacaactctt 74  Q
    |||| ||| |||| || ||||||| ||||||||||||||||||||   | || ||||||||||||||||    
T  5054126 ttttttttataaatttatggttgtctcaaaagttgtcatataaatagttttttaaataacacaactctt 5054058  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #48
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 73
Target Start/End: Complemental strand, 7664025 - 7663954
Alignment:
Q  1 cctcattttctttgtaaaattttggttgtttcaaaagttgtcatataaatgaatgttcaaataacacaactct 73  Q
    |||| ||||||||||||| || |||||||   |||| ||||||  ||||||| ||||||||||||||||||||    
T  7664025 cctctttttctttgtaaatttatggttgtcataaaa-ttgtcacctaaatgattgttcaaataacacaactct 7663954  T

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Target: chr2; HSP #49
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 72
Target Start/End: Original strand, 19633394 - 19633466
Alignment:
Q  1 cctcattttctttgtaaaattttggttgtttcaaaagttgtc-atataaatgaatgttcaaataacacaactc 72  Q
    |||||||| ||||||||||||||| ||||  |||||||| || | ||| || ||||||||||||| |||||||    
T  19633394 cctcatttcctttgtaaaattttgattgtcacaaaagttatcaacatatataaatgttcaaataatacaactc 19633466  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #50
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 72
Target Start/End: Original strand, 19830295 - 19830367
Alignment:
Q  1 cctcattttctttgtaaaattttggttgtttcaaaagttgtc-atataaatgaatgttcaaataacacaactc 72  Q
    |||||||| ||||||||||||||| ||||  |||||||| || | ||| || ||||||||||||| |||||||    
T  19830295 cctcatttcctttgtaaaattttgattgtcacaaaagttatcaacatatataaatgttcaaataatacaactc 19830367  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #51
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 29
Target Start/End: Original strand, 22416325 - 22416353
Alignment:
Q  1 cctcattttctttgtaaaattttggttgt 29  Q
    |||||||||||||||||||||||||||||    
T  22416325 cctcattttctttgtaaaattttggttgt 22416353  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #52
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 2 - 74
Target Start/End: Original strand, 37037351 - 37037423
Alignment:
Q  2 ctcattttctttgtaaaattttggttgtttcaaaagttgtcatataaatgaatgttcaaataacacaactctt 74  Q
    |||| |||||||||||  || |||||||  |||||||||| ||| || ||  |||||||||||||||||||||    
T  37037351 ctcactttctttgtaagtttatggttgtaccaaaagttgttataaaattggttgttcaaataacacaactctt 37037423  T

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Target: chr2; HSP #53
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 5 - 73
Target Start/End: Original strand, 43076000 - 43076067
Alignment:
Q  5 attttctttgtaaaattttggttgtttcaaaagttgtcatataaatgaatgttcaaataacacaactct 73  Q
    ||||| ||| ||||||||||||||| ||||| ||| ||||||||||   | ||||||||||||||||||    
T  43076000 attttttttataaaattttggttgtctcaaa-gttatcatataaattgttattcaaataacacaactct 43076067  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #54
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 4 - 72
Target Start/End: Complemental strand, 44977455 - 44977387
Alignment:
Q  4 cattttctttgtaaaattttggttgtttcaaaagttgtcatataaatgaatgttcaaataacacaactc 72  Q
    ||||||||||||||| || ||||||| ||| ||||| || |  |||||  |||||||||||||||||||    
T  44977455 cattttctttgtaaatttatggttgtctcataagttttcgttcaaatggttgttcaaataacacaactc 44977387  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 62; Significance: 5e-27; HSPs: 54)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 62; E-Value: 5e-27
Query Start/End: Original strand, 1 - 74
Target Start/End: Original strand, 21401510 - 21401583
Alignment:
Q  1 cctcattttctttgtaaaattttggttgtttcaaaagttgtcatataaatgaatgttcaaataacacaactctt 74  Q
    |||||||||||||||||||||||| |||||||||||||||||| ||||||| ||||||||||||||||||||||    
T  21401510 cctcattttctttgtaaaattttgattgtttcaaaagttgtcacataaatggatgttcaaataacacaactctt 21401583  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 58; E-Value: 1e-24
Query Start/End: Original strand, 5 - 74
Target Start/End: Complemental strand, 9566915 - 9566846
Alignment:
Q  5 attttctttgtaaaattttggttgtttcaaaagttgtcatataaatgaatgttcaaataacacaactctt 74  Q
    ||||||| ||||||||||||||||| |||||||||||||||||| |||||||||||||||||||||||||    
T  9566915 attttctatgtaaaattttggttgtctcaaaagttgtcatataattgaatgttcaaataacacaactctt 9566846  T

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Target: chr1; HSP #3
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 1 - 72
Target Start/End: Complemental strand, 19947703 - 19947632
Alignment:
Q  1 cctcattttctttgtaaaattttggttgtttcaaaagttgtcatataaatgaatgttcaaataacacaactc 72  Q
    |||| |||||||| ||||||||||||||| |||||||||||||||||||| |||||||||||||||||||||    
T  19947703 cctccttttctttataaaattttggttgtctcaaaagttgtcatataaataaatgttcaaataacacaactc 19947632  T

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Target: chr1; HSP #4
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 1 - 76
Target Start/End: Original strand, 46907307 - 46907382
Alignment:
Q  1 cctcattttctttgtaaaattttggttgtttcaaaagttgtcatataaatgaatgttcaaataacacaactcttaa 76  Q
    ||||||||||||| |||||||||| |||| |||||||||||| |||||||| ||||||||||||||||||||||||    
T  46907307 cctcattttctttataaaattttgattgtctcaaaagttgtcgtataaatggatgttcaaataacacaactcttaa 46907382  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 7 - 71
Target Start/End: Original strand, 30570642 - 30570706
Alignment:
Q  7 tttctttgtaaaattttggttgtttcaaaagttgtcatataaatgaatgttcaaataacacaact 71  Q
    |||||||||||||||||| ||||||||||| || |||||||||||||||||||||||||||||||    
T  30570642 tttctttgtaaaattttgattgtttcaaaaattatcatataaatgaatgttcaaataacacaact 30570706  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 52; E-Value: 5e-21
Query Start/End: Original strand, 2 - 73
Target Start/End: Original strand, 31827064 - 31827135
Alignment:
Q  2 ctcattttctttgtaaaattttggttgtttcaaaagttgtcatataaatgaatgttcaaataacacaactct 73  Q
    |||||||| ||||||||||||||||||| |||||||||||||| |||||  |||||||||||||||||||||    
T  31827064 ctcattttttttgtaaaattttggttgtatcaaaagttgtcatctaaatagatgttcaaataacacaactct 31827135  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 52; E-Value: 5e-21
Query Start/End: Original strand, 3 - 74
Target Start/End: Original strand, 50149060 - 50149131
Alignment:
Q  3 tcattttctttgtaaaattttggttgtttcaaaagttgtcatataaatgaatgttcaaataacacaactctt 74  Q
    |||||||||||||||||||||| ||||| ||||||||||||||||||   ||||||||||||||||||||||    
T  50149060 tcattttctttgtaaaattttgattgttgcaaaagttgtcatataaaatgatgttcaaataacacaactctt 50149131  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 1 - 75
Target Start/End: Complemental strand, 27465016 - 27464942
Alignment:
Q  1 cctcattttctttgtaaaattttggttgtttcaaaagttgtcatataaatgaatgttcaaataacacaactctta 75  Q
    |||||||| ||||||||||||||||||||  |||||||||||| ||| ||| |||||||||||||||||||||||    
T  27465016 cctcatttcctttgtaaaattttggttgtcacaaaagttgtcacatatatggatgttcaaataacacaactctta 27464942  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 1 - 75
Target Start/End: Original strand, 31088293 - 31088367
Alignment:
Q  1 cctcattttctttgtaaaattttggttgtttcaaaagttgtcatataaatgaatgttcaaataacacaactctta 75  Q
    ||||||||| |||||||||||||||||||  |||||||||||| ||| ||| |||||||||||||||||||||||    
T  31088293 cctcattttttttgtaaaattttggttgtcacaaaagttgtcacatatatggatgttcaaataacacaactctta 31088367  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 15 - 73
Target Start/End: Complemental strand, 49647096 - 49647038
Alignment:
Q  15 taaaattttggttgtttcaaaagttgtcatataaatgaatgttcaaataacacaactct 73  Q
    ||||||||| |||||||||||||||||||||||||||||||||||||||||| ||||||    
T  49647096 taaaattttagttgtttcaaaagttgtcatataaatgaatgttcaaataacataactct 49647038  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 50; E-Value: 8e-20
Query Start/End: Original strand, 15 - 76
Target Start/End: Complemental strand, 2269517 - 2269456
Alignment:
Q  15 taaaattttggttgtttcaaaagttgtcatataaatgaatgttcaaataacacaactcttaa 76  Q
    ||||||||||||||| |||||||||||||||||| ||||| |||||||||||||||||||||    
T  2269517 taaaattttggttgtatcaaaagttgtcatataattgaatattcaaataacacaactcttaa 2269456  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 50; E-Value: 8e-20
Query Start/End: Original strand, 2 - 75
Target Start/End: Complemental strand, 45121439 - 45121366
Alignment:
Q  2 ctcattttctttgtaaaattttggttgtttcaaaagttgtcatataaatgaatgttcaaataacacaactctta 75  Q
    ||||||| ||||||||||||||||||||  |||||||||||| ||| ||| |||||||||||||||||||||||    
T  45121439 ctcatttcctttgtaaaattttggttgtcacaaaagttgtcacatatatggatgttcaaataacacaactctta 45121366  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 49; E-Value: 3e-19
Query Start/End: Original strand, 1 - 73
Target Start/End: Original strand, 33100920 - 33100992
Alignment:
Q  1 cctcattttctttgtaaaattttggttgtttcaaaagttgtcatataaatgaatgttcaaataacacaactct 73  Q
    |||||||| |||| |||||||||||||||  |||||||||||| ||| |||||||||||||||||||||||||    
T  33100920 cctcatttcctttataaaattttggttgtcacaaaagttgtcacatatatgaatgttcaaataacacaactct 33100992  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 1 - 72
Target Start/End: Original strand, 26469471 - 26469542
Alignment:
Q  1 cctcattttctttgtaaaattttggttgtttcaaaagttgtcatataaatgaatgttcaaataacacaactc 72  Q
    |||||||| ||||||||||||||||||||  |||||||||||| ||| ||| ||||||||||||||||||||    
T  26469471 cctcatttcctttgtaaaattttggttgtcacaaaagttgtcacatatatggatgttcaaataacacaactc 26469542  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 1 - 72
Target Start/End: Complemental strand, 44519110 - 44519039
Alignment:
Q  1 cctcattttctttgtaaaattttggttgtttcaaaagttgtcatataaatgaatgttcaaataacacaactc 72  Q
    |||||||| |||||||||||||||||| |  |||||||||||| ||| ||||||||||||||||||||||||    
T  44519110 cctcatttcctttgtaaaattttggttatcacaaaagttgtcacatatatgaatgttcaaataacacaactc 44519039  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 1 - 74
Target Start/End: Original strand, 649881 - 649954
Alignment:
Q  1 cctcattttctttgtaaaattttggttgtttcaaaagttgtcatataaatgaatgttcaaataacacaactctt 74  Q
    |||||||| ||||||||||||||||||||  |||||||||||| |||  || ||||||||||||||||||||||    
T  649881 cctcatttcctttgtaaaattttggttgtcacaaaagttgtcacatatgtggatgttcaaataacacaactctt 649954  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 45; E-Value: 8e-17
Query Start/End: Original strand, 1 - 72
Target Start/End: Original strand, 2571747 - 2571819
Alignment:
Q  1 cctcattttctttgt-aaaattttggttgtttcaaaagttgtcatataaatgaatgttcaaataacacaactc 72  Q
    ||||||||||||||| ||||||||||||||  |||||||||||||||  ||| ||||||||||||||||||||    
T  2571747 cctcattttctttgttaaaattttggttgtcacaaaagttgtcatatgcatggatgttcaaataacacaactc 2571819  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 45; E-Value: 8e-17
Query Start/End: Original strand, 2 - 74
Target Start/End: Complemental strand, 19055717 - 19055645
Alignment:
Q  2 ctcattttctttgtaaaattttggttgtttcaaaagttgtcatataaatgaatgttcaaataacacaactctt 74  Q
    ||||||| |||||||||||||| |||||  |||||||||||| ||| ||| ||||||||||||||||||||||    
T  19055717 ctcatttcctttgtaaaattttagttgtcacaaaagttgtcacatatatggatgttcaaataacacaactctt 19055645  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 45; E-Value: 8e-17
Query Start/End: Original strand, 6 - 66
Target Start/End: Complemental strand, 26021030 - 26020970
Alignment:
Q  6 ttttctttgtaaaattttggttgtttcaaaagttgtcatataaatgaatgttcaaataaca 66  Q
    |||| |||||||||||||| |||| ||||||| ||||||||||||||||||||||||||||    
T  26021030 ttttttttgtaaaattttgattgtctcaaaagatgtcatataaatgaatgttcaaataaca 26020970  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 45; E-Value: 8e-17
Query Start/End: Original strand, 5 - 72
Target Start/End: Complemental strand, 48103318 - 48103250
Alignment:
Q  5 attttctttgtaaaattttggttgtttcaaaagttgtcatataaatgaatg-ttcaaataacacaactc 72  Q
    ||||||||||||||||||||||||| ||||||||||||||||||||  ||| |||||||| ||||||||    
T  48103318 attttctttgtaaaattttggttgtctcaaaagttgtcatataaatagatgtttcaaatatcacaactc 48103250  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 3 - 66
Target Start/End: Original strand, 6809694 - 6809757
Alignment:
Q  3 tcattttctttgtaaaattttggttgtttcaaaagttgtcatataaatgaatgttcaaataaca 66  Q
    ||||||||| | |||||||||||||||  |||||||||||||||||||| ||||||||||||||    
T  6809694 tcattttctatataaaattttggttgtcccaaaagttgtcatataaatggatgttcaaataaca 6809757  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 3 - 74
Target Start/End: Original strand, 18434909 - 18434980
Alignment:
Q  3 tcattttctttgtaaaattttggttgtttcaaaagttgtcatataaatgaatgttcaaataacacaactctt 74  Q
    |||||||||||| ||||||||||||||  ||||||||||||| |||||  || |||||||||||||||||||    
T  18434909 tcattttctttgcaaaattttggttgtcacaaaagttgtcatctaaatagattttcaaataacacaactctt 18434980  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 2 - 72
Target Start/End: Original strand, 48470752 - 48470822
Alignment:
Q  2 ctcattttctttgtaaaattttggttgtttcaaaagttgtcatataaatgaatgttcaaataacacaactc 72  Q
    ||||||| ||||||||||||||| ||||  |||||||||||| ||| ||| ||||||||||||||||||||    
T  48470752 ctcatttcctttgtaaaattttgattgtcacaaaagttgtcacatatatggatgttcaaataacacaactc 48470822  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 2 - 71
Target Start/End: Original strand, 9988065 - 9988134
Alignment:
Q  2 ctcattttctttgtaaaattttggttgtttcaaaagttgtcatataaatgaatgttcaaataacacaact 71  Q
    |||||||| |||||||||||||||||||| |||| ||||| |||||||   |||||||||||||||||||    
T  9988065 ctcattttatttgtaaaattttggttgttgcaaaggttgtaatataaaatgatgttcaaataacacaact 9988134  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 1 - 74
Target Start/End: Original strand, 23645523 - 23645596
Alignment:
Q  1 cctcattttctttgtaaaattttggttgtttcaaaagttgtcatataaatgaatgttcaaataacacaactctt 74  Q
    |||||||| ||||||||||||||||||||  |||||||||| | ||| ||| |||||||||||||| |||||||    
T  23645523 cctcatttcctttgtaaaattttggttgtcacaaaagttgttacatatatgtatgttcaaataacataactctt 23645596  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 6 - 75
Target Start/End: Complemental strand, 30467487 - 30467418
Alignment:
Q  6 ttttctttgtaaaattttggttgtttcaaaagttgtcatataaatgaatgttcaaataacacaactctta 75  Q
    |||||||||||||| ||| |||||  ||||||||||||||||| |  |||||||||||||||||||||||    
T  30467487 ttttctttgtaaaactttagttgtcacaaaagttgtcatataattagatgttcaaataacacaactctta 30467418  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 1 - 66
Target Start/End: Original strand, 50932416 - 50932481
Alignment:
Q  1 cctcattttctttgtaaaattttggttgtttcaaaagttgtcatataaatgaatgttcaaataaca 66  Q
    |||||||| ||||||||||||||||||||  |||||||||||| ||| ||| ||||||||||||||    
T  50932416 cctcatttcctttgtaaaattttggttgtaacaaaagttgtcacatatatggatgttcaaataaca 50932481  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 1 - 73
Target Start/End: Complemental strand, 52576261 - 52576188
Alignment:
Q  1 cctcattttctttgtaaaattttggttgtttcaaaagttgtcatataaatgaa-tgttcaaataacacaactct 73  Q
    |||||||| ||||||||||||||||||||  ||||||||||||  || ||||| ||||||||||||||||||||    
T  52576261 cctcatttcctttgtaaaattttggttgtcacaaaagttgtcacctatatgaattgttcaaataacacaactct 52576188  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 15 - 75
Target Start/End: Original strand, 32915389 - 32915449
Alignment:
Q  15 taaaattttggttgtttcaaaagttgtcatataaatgaatgttcaaataacacaactctta 75  Q
    ||||||||||||||||||||||||| | ||||||||| |||||||||||| ||| ||||||    
T  32915389 taaaattttggttgtttcaaaagttattatataaatggatgttcaaataaaacacctctta 32915449  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 2 - 74
Target Start/End: Original strand, 43775319 - 43775391
Alignment:
Q  2 ctcattttctttgtaaaattttggttgtttcaaaagttgtcatataaatgaatgttcaaataacacaactctt 74  Q
    ||||||||||||||||||||||| ||||   ||||||||||| ||| |||||| |||||||||||||| ||||    
T  43775319 ctcattttctttgtaaaattttgattgtcataaaagttgtcacatatatgaatattcaaataacacaagtctt 43775391  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 40; E-Value: 0.00000000000007
Query Start/End: Original strand, 1 - 68
Target Start/End: Original strand, 35369812 - 35369879
Alignment:
Q  1 cctcattttctttgtaaaattttggttgtttcaaaagttgtcatataaatgaatgttcaaataacaca 68  Q
    |||||||| |||| |||||||||||||||  |||||||||||| ||| ||| ||||||||||||||||    
T  35369812 cctcatttcctttataaaattttggttgtcacaaaagttgtcacatatatggatgttcaaataacaca 35369879  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 40; E-Value: 0.00000000000007
Query Start/End: Original strand, 1 - 72
Target Start/End: Original strand, 37619656 - 37619727
Alignment:
Q  1 cctcattttctttgtaaaattttggttgtttcaaaagttgtcatataaatgaatgttcaaataacacaactc 72  Q
    |||||||| ||||||||||||||||||||   ||||||||||| ||| ||| |||||||||||||| |||||    
T  37619656 cctcatttcctttgtaaaattttggttgtaataaaagttgtcacatatatggatgttcaaataacataactc 37619727  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 40; E-Value: 0.00000000000007
Query Start/End: Original strand, 7 - 74
Target Start/End: Original strand, 45640419 - 45640486
Alignment:
Q  7 tttctttgtaaaattttggttgtttcaaaagttgtcatataaatgaatgttcaaataacacaactctt 74  Q
    ||||||||||||||||||||||   |||||||||||| ||| ||  ||||||||||||||||||||||    
T  45640419 tttctttgtaaaattttggttgcaacaaaagttgtcacatatatagatgttcaaataacacaactctt 45640486  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 40; E-Value: 0.00000000000007
Query Start/End: Original strand, 1 - 72
Target Start/End: Complemental strand, 50726207 - 50726136
Alignment:
Q  1 cctcattttctttgtaaaattttggttgtttcaaaagttgtcatataaatgaatgttcaaataacacaactc 72  Q
    |||||||||||||| ||||||||||||||  ||||| || ||| ||| ||| ||||||||||||||||||||    
T  50726207 cctcattttctttgcaaaattttggttgtcacaaaaattatcacatatatggatgttcaaataacacaactc 50726136  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 2 - 72
Target Start/End: Complemental strand, 3981984 - 3981914
Alignment:
Q  2 ctcattttctttgtaaaattttggttgtttcaaaagttgtcatataaatgaatgttcaaataacacaactc 72  Q
    ||||||||||||||||||||||| ||||  |||| ||||||| ||  ||| ||||||||||||||||||||    
T  3981984 ctcattttctttgtaaaattttgattgtcacaaatgttgtcacatttatggatgttcaaataacacaactc 3981914  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 1 - 74
Target Start/End: Complemental strand, 18512302 - 18512229
Alignment:
Q  1 cctcattttctttgtaaaattttggttgtttcaaaagttgtcatataaatgaatgttcaaataacacaactctt 74  Q
    ||||||||||||| ||||||||| ||||| | |||| || ||||||||||  ||||| ||||||||||||||||    
T  18512302 cctcattttctttataaaattttagttgtcttaaaaattatcatataaattgatgttgaaataacacaactctt 18512229  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 3 - 71
Target Start/End: Complemental strand, 49065321 - 49065253
Alignment:
Q  3 tcattttctttgtaaaattttggttgtttcaaaagttgtcatataaatgaatgttcaaataacacaact 71  Q
    ||||||||||||||||||||||||| | |  ||| |||||||||||||  || ||||||||||||||||    
T  49065321 tcattttctttgtaaaattttggttatctttaaaattgtcatataaatagatattcaaataacacaact 49065253  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 11 - 74
Target Start/End: Complemental strand, 40328718 - 40328655
Alignment:
Q  11 tttgtaaaattttggttgtttcaaaagttgtcatataaatgaatgttcaaataacacaactctt 74  Q
    ||||||||||||||||| | ||||||||| |||| |||||  |||||||||||||| |||||||    
T  40328718 tttgtaaaattttggttatatcaaaagttatcatctaaatagatgttcaaataacataactctt 40328655  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 37 - 75
Target Start/End: Original strand, 29359773 - 29359811
Alignment:
Q  37 gttgtcatataaatgaatgttcaaataacacaactctta 75  Q
    ||||||||||| |||||||||||||||||||||||||||    
T  29359773 gttgtcatatatatgaatgttcaaataacacaactctta 29359811  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 1 - 66
Target Start/End: Original strand, 3851270 - 3851335
Alignment:
Q  1 cctcattttctttgtaaaattttggttgtttcaaaagttgtcatataaatgaatgttcaaataaca 66  Q
    |||||||| |||| |||||||||||||||   ||||||||||| ||| ||| ||||||||||||||    
T  3851270 cctcatttcctttataaaattttggttgtcataaaagttgtcacatatatggatgttcaaataaca 3851335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 1 - 74
Target Start/End: Complemental strand, 37274992 - 37274919
Alignment:
Q  1 cctcattttctttgtaaaattttggttgtttcaaaagttgtcatataaatgaatgttcaaataacacaactctt 74  Q
    |||||||| ||||| ||||||||| ||||  |||||||||||| ||  | | ||||||||||||||||||||||    
T  37274992 cctcatttcctttgcaaaattttgattgtcacaaaagttgtcacatgtaaggatgttcaaataacacaactctt 37274919  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 6 - 67
Target Start/End: Complemental strand, 43367855 - 43367794
Alignment:
Q  6 ttttctttgtaaaattttggttgtttcaaaagttgtcatataaatgaatgttcaaataacac 67  Q
    ||||||||||||| || ||||||||  ||||||||||| | |||||| ||||||||||||||    
T  43367855 ttttctttgtaaatttatggttgttctaaaagttgtcacacaaatgattgttcaaataacac 43367794  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 5 - 73
Target Start/End: Original strand, 25672458 - 25672526
Alignment:
Q  5 attttctttgtaaaattttggttgtttcaaaagttgtcatataaatgaatgttcaaataacacaactct 73  Q
    |||||||||||||||||||| || | ||||||||| ||||||||||   |||||| |||| ||||||||    
T  25672458 attttctttgtaaaattttgattatatcaaaagttatcatataaatagttgttcagataatacaactct 25672526  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 72
Target Start/End: Complemental strand, 44914531 - 44914459
Alignment:
Q  1 cctcattttctttgtaaaattttggttgtttcaaaag-ttgtcatataaatgaatgttcaaataacacaactc 72  Q
    |||||||| ||||||||||||||| ||||  |||||  |||||| ||| ||| ||||||||||||||||||||    
T  44914531 cctcatttcctttgtaaaattttgattgtcgcaaaaaattgtcacatatatggatgttcaaataacacaactc 44914459  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 17 - 72
Target Start/End: Complemental strand, 8350142 - 8350087
Alignment:
Q  17 aaattttggttgtttcaaaagttgtcatataaatgaatgttcaaataacacaactc 72  Q
    |||||||||||||  | |||||||||| ||| ||| ||||||||||||||||||||    
T  8350142 aaattttggttgtcacgaaagttgtcacatatatggatgttcaaataacacaactc 8350087  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 5 - 68
Target Start/End: Complemental strand, 29706658 - 29706595
Alignment:
Q  5 attttctttgtaaaattttggttgtttcaaaagttgtcatataaatgaatgttcaaataacaca 68  Q
    |||||||||||||| || ||||| | | ||||||||||| | |||||| |||||||||||||||    
T  29706658 attttctttgtaaatttatggttatcttaaaagttgtcacagaaatgattgttcaaataacaca 29706595  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 1 - 72
Target Start/End: Complemental strand, 51571305 - 51571234
Alignment:
Q  1 cctcattttctttgtaaaattttggttgtttcaaaagttgtcatataaatgaatgttcaaataacacaactc 72  Q
    |||| |||||||||||||||| |||||||  ||||| ||||||   |||||  |||||||||||||||||||    
T  51571305 cctctttttctttgtaaaattatggttgtcccaaaaattgtcaatcaaatggttgttcaaataacacaactc 51571234  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #48
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 10 - 72
Target Start/End: Original strand, 4466816 - 4466877
Alignment:
Q  10 ctttgtaaaattttggttgtttcaaaagttgtcatataaatgaatgttcaaataacacaactc 72  Q
    |||||||||||| |||||||| ||||| |||||||  |||||  |||||||||||||||||||    
T  4466816 ctttgtaaaattatggttgttccaaaaattgtcat-caaatggttgttcaaataacacaactc 4466877  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #49
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 6 - 67
Target Start/End: Original strand, 5486014 - 5486074
Alignment:
Q  6 ttttctttgtaaaattttggttgtttcaaaagttgtcatataaatgaatgttcaaataacac 67  Q
    ||||||||||||| || ||||||||| | |||||||||  ||||||| ||||||||||||||    
T  5486014 ttttctttgtaaa-ttatggttgttttataagttgtcaagtaaatgattgttcaaataacac 5486074  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #50
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 3 - 72
Target Start/End: Original strand, 26207955 - 26208024
Alignment:
Q  3 tcattttctttgtaaaattttggttgtttcaaaagttgtcatataaatgaatgttcaaataacacaactc 72  Q
    |||||||||||| ||||||||| || |  |||||||| | || |||||  ||||||||||||||||||||    
T  26207955 tcattttctttgcaaaattttgattatcacaaaagttataatctaaatagatgttcaaataacacaactc 26208024  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #51
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 6 - 74
Target Start/End: Original strand, 3672429 - 3672497
Alignment:
Q  6 ttttctttgtaaaattttggttgtttcaaaagttgtcatataaatgaatgttcaaataacacaactctt 74  Q
    |||| |||| ||||||||||||||   ||||||||||| |||| ||  |||| ||||||||||||||||    
T  3672429 ttttttttgcaaaattttggttgtactaaaagttgtcacataattggttgtttaaataacacaactctt 3672497  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #52
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 29
Target Start/End: Complemental strand, 27533443 - 27533415
Alignment:
Q  1 cctcattttctttgtaaaattttggttgt 29  Q
    |||||||||||||||||||||||||||||    
T  27533443 cctcattttctttgtaaaattttggttgt 27533415  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #53
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 73
Target Start/End: Complemental strand, 30735252 - 30735180
Alignment:
Q  1 cctcattttctttgtaaaattttggttgtttcaaaagttgtcatataaatgaatgttcaaataacacaactct 73  Q
    |||||||| |||| |||||||||| ||||  ||||| || ||| ||| ||| || ||||||||||||||||||    
T  30735252 cctcatttactttataaaattttgattgtcacaaaaattatcacatacatggatattcaaataacacaactct 30735180  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #54
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 35 - 75
Target Start/End: Complemental strand, 34974762 - 34974722
Alignment:
Q  35 aagttgtcatataaatgaatgttcaaataacacaactctta 75  Q
    ||||||||| |||||||| ||||||||||||||| ||||||    
T  34974762 aagttgtcacataaatgattgttcaaataacacacctctta 34974722  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 58; Significance: 1e-24; HSPs: 31)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 58; E-Value: 1e-24
Query Start/End: Original strand, 1 - 78
Target Start/End: Original strand, 29025372 - 29025449
Alignment:
Q  1 cctcattttctttgtaaaattttggttgtttcaaaagttgtcatataaatgaatgttcaaataacacaactcttaata 78  Q
    |||||||||||||||||||||||||||||  |||||||||||||||||||| ||||| ||||||||||||||| ||||    
T  29025372 cctcattttctttgtaaaattttggttgtcccaaaagttgtcatataaatggatgtttaaataacacaactctaaata 29025449  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 55; E-Value: 8e-23
Query Start/End: Original strand, 2 - 72
Target Start/End: Complemental strand, 23754664 - 23754594
Alignment:
Q  2 ctcattttctttgtaaaattttggttgtttcaaaagttgtcatataaatgaatgttcaaataacacaactc 72  Q
    ||||||||||||||||||||||||||||| |||| |||||||||||||  |||||||||||||||||||||    
T  23754664 ctcattttctttgtaaaattttggttgttgcaaaggttgtcatataaaataatgttcaaataacacaactc 23754594  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 52; E-Value: 5e-21
Query Start/End: Original strand, 3 - 74
Target Start/End: Complemental strand, 37133819 - 37133748
Alignment:
Q  3 tcattttctttgtaaaattttggttgtttcaaaagttgtcatataaatgaatgttcaaataacacaactctt 74  Q
    |||||||||||||||||||||||||||  ||||||||||||| |||||| ||||| ||||||||||||||||    
T  37133819 tcattttctttgtaaaattttggttgtcacaaaagttgtcatctaaatggatgttaaaataacacaactctt 37133748  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 45; E-Value: 8e-17
Query Start/End: Original strand, 2 - 74
Target Start/End: Complemental strand, 12898887 - 12898815
Alignment:
Q  2 ctcattttctttgtaaaattttggttgtttcaaaagttgtcatataaatgaatgttcaaataacacaactctt 74  Q
    ||||||| ||||||||||||||||||||  |||||||||||| ||| ||| |||||||||||||| |||||||    
T  12898887 ctcatttcctttgtaaaattttggttgtcacaaaagttgtcacatatatggatgttcaaataacataactctt 12898815  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 17 - 72
Target Start/End: Original strand, 7598836 - 7598891
Alignment:
Q  17 aaattttggttgtttcaaaagttgtcatataaatgaatgttcaaataacacaactc 72  Q
    ||||||||||||| ||||||||| |||||||| |||||||||||||||||||||||    
T  7598836 aaattttggttgtctcaaaagttttcatataattgaatgttcaaataacacaactc 7598891  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 5 - 76
Target Start/End: Complemental strand, 10839437 - 10839366
Alignment:
Q  5 attttctttgtaaaattttggttgtttcaaaagttgtcatataaatgaatgttcaaataacacaactcttaa 76  Q
    ||||||||||||||||||| ||||| |||||| || ||||| ||||| ||||||||||||||| ||||||||    
T  10839437 attttctttgtaaaattttagttgtctcaaaaattatcataaaaatggatgttcaaataacactactcttaa 10839366  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 1 - 72
Target Start/End: Original strand, 22719552 - 22719623
Alignment:
Q  1 cctcattttctttgtaaaattttggttgtttcaaaagttgtcatataaatgaatgttcaaataacacaactc 72  Q
    ||||||||||||||||||||||||||| |  |||||||||||| ||| |||  |||||||||||||||||||    
T  22719552 cctcattttctttgtaaaattttggttatcacaaaagttgtcacatatatggctgttcaaataacacaactc 22719623  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 2 - 73
Target Start/End: Original strand, 24479336 - 24479407
Alignment:
Q  2 ctcattttctttgtaaaattttggttgtttcaaaagttgtcatataaatgaatgttcaaataacacaactct 73  Q
    ||||||| |||||||||||||| |||||  |||||||| ||||||| ||||||| |||||||||||||||||    
T  24479336 ctcatttcctttgtaaaattttagttgtcacaaaagttatcatatatatgaatgctcaaataacacaactct 24479407  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 5 - 71
Target Start/End: Original strand, 32133439 - 32133505
Alignment:
Q  5 attttctttgtaaaattttggttgtttcaaaagttgtcatataaatgaatgttcaaataacacaact 71  Q
    ||||| ||||||||||||||||| | |||||| || ||||||||||| |||||||||||||||||||    
T  32133439 attttatttgtaaaattttggttatctcaaaatttatcatataaatggatgttcaaataacacaact 32133505  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 1 - 73
Target Start/End: Complemental strand, 11253501 - 11253429
Alignment:
Q  1 cctcattttctttgtaaaattttggttgtttcaaaagttgtcatataaatgaatgttcaaataacacaactct 73  Q
    |||||||||||||||||||||||||| ||  |||||||||||||||  ||  |||||||||||| ||||||||    
T  11253501 cctcattttctttgtaaaattttggtcgtcacaaaagttgtcatatttatagatgttcaaataatacaactct 11253429  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 1 - 81
Target Start/End: Original strand, 34639645 - 34639725
Alignment:
Q  1 cctcattttctttgtaaaattttggttgtttcaaaagttgtcatataaatgaatgttcaaataacacaactcttaatataa 81  Q
    ||||||||| |||||||||||||| || | |||||| || |||| |||||| |||||||||||||| |||||| |||||||    
T  34639645 cctcattttatttgtaaaattttgattctctcaaaaattatcatgtaaatggatgttcaaataacataactctaaatataa 34639725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 40; E-Value: 0.00000000000007
Query Start/End: Original strand, 1 - 76
Target Start/End: Original strand, 27325870 - 27325945
Alignment:
Q  1 cctcattttctttgtaaaattttggttgtttcaaaagttgtcatataaatgaatgttcaaataacacaactcttaa 76  Q
    |||||||| ||||||||||||||| || |  | |||||||||| ||| ||| ||||||||||||||||||||||||    
T  27325870 cctcatttcctttgtaaaattttgattatcacgaaagttgtcacatatatggatgttcaaataacacaactcttaa 27325945  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 3 - 64
Target Start/End: Complemental strand, 3381527 - 3381467
Alignment:
Q  3 tcattttctttgtaaaattttggttgtttcaaaagttgtcatataaatgaatgttcaaataa 64  Q
    |||||||||||||||||||| |||||| |||| |||||||||||||||| |||||| |||||    
T  3381527 tcattttctttgtaaaattt-ggttgtatcaagagttgtcatataaatggatgttctaataa 3381467  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 1 - 74
Target Start/End: Original strand, 13106592 - 13106665
Alignment:
Q  1 cctcattttctttgtaaaattttggttgtttcaaaagttgtcatataaatgaatgttcaaataacacaactctt 74  Q
    |||| ||||||||||||| || ||||||||  |||||||||||  ||||||  |||||||||||||||||||||    
T  13106592 cctctttttctttgtaaatttatggttgttataaaagttgtcacctaaatggttgttcaaataacacaactctt 13106665  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 1 - 69
Target Start/End: Complemental strand, 32501155 - 32501087
Alignment:
Q  1 cctcattttctttgtaaaattttggttgtttcaaaagttgtcatataaatgaatgttcaaataacacaa 69  Q
    |||||||| ||||||||||||||||||||  ||||| || ||| ||| ||| |||||||||||||||||    
T  32501155 cctcatttcctttgtaaaattttggttgtcacaaaaattctcacatatatggatgttcaaataacacaa 32501087  T

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Target: chr8; HSP #16
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 1 - 73
Target Start/End: Original strand, 34186719 - 34186791
Alignment:
Q  1 cctcattttctttgtaaaattttggttgtttcaaaagttgtcatataaatgaatgttcaaataacacaactct 73  Q
    |||||||| ||||| ||||||||| ||||  |||||||||||| ||  ||| |||||||||||||||||||||    
T  34186719 cctcatttcctttgcaaaattttgattgtcacaaaagttgtcacatgtatggatgttcaaataacacaactct 34186791  T

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Target: chr8; HSP #17
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 1 - 85
Target Start/End: Complemental strand, 37449384 - 37449300
Alignment:
Q  1 cctcattttctttgtaaaattttggttgtttcaaaagttgtcatataaatgaatgttcaaataacacaactcttaatataattca 85  Q
    |||||||| ||||||||||||||| || |  |||||||| ||| ||| ||| || |||||||||||||||||||  |||||||||    
T  37449384 cctcatttcctttgtaaaattttgattatcacaaaagttatcacatatatggatattcaaataacacaactctttttataattca 37449300  T

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Target: chr8; HSP #18
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 2 - 74
Target Start/End: Original strand, 43397894 - 43397966
Alignment:
Q  2 ctcattttctttgtaaaattttggttgtttcaaaagttgtcatataaatgaatgttcaaataacacaactctt 74  Q
    ||||||||||||||||||||||||||||  |||||| ||||| ||  ||| |||||||| ||||||| |||||    
T  43397894 ctcattttctttgtaaaattttggttgtcacaaaagctgtcacatgtatggatgttcaattaacacatctctt 43397966  T

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Target: chr8; HSP #19
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 72
Target Start/End: Complemental strand, 4054245 - 4054174
Alignment:
Q  1 cctcattttctttgtaaaattttggttgtttcaaaagttgtcatataaatgaatgttcaaataacacaactc 72  Q
    ||||||||  |||||||| ||||| ||||  |||||||||||| ||| || |||||||||||||||||||||    
T  4054245 cctcatttcatttgtaaagttttgattgtcacaaaagttgtcacatatataaatgttcaaataacacaactc 4054174  T

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Target: chr8; HSP #20
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 3 - 78
Target Start/End: Complemental strand, 36660407 - 36660332
Alignment:
Q  3 tcattttctttgtaaaattttggttgtttcaaaagttgtcatataaatgaatgttcaaataacacaactcttaata 78  Q
    ||||||||||| |||||||||| ||||  |||||||| ||| ||  ||| ||||||||||||||||||| ||||||    
T  36660407 tcattttctttataaaattttgattgtcacaaaagttatcacatttatggatgttcaaataacacaactattaata 36660332  T

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Target: chr8; HSP #21
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 72
Target Start/End: Complemental strand, 38958510 - 38958439
Alignment:
Q  1 cctcattttctttgtaaaattttggttgtttcaaaagttgtcatataaatgaatgttcaaataacacaactc 72  Q
    |||||||||||||||||| |  |||||||| ||||| |||||||  |||||| |||||||||||||| ||||    
T  38958510 cctcattttctttgtaaattgatggttgttccaaaaattgtcattaaaatgattgttcaaataacacgactc 38958439  T

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Target: chr8; HSP #22
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 72
Target Start/End: Original strand, 42768316 - 42768387
Alignment:
Q  1 cctcattttctttgtaaaattttggttgtttcaaaagttgtcatataaatgaatgttcaaataacacaactc 72  Q
    |||||||| |||||||||||||| |||||  ||||| || ||| ||| ||| ||||||||||||||||||||    
T  42768316 cctcatttcctttgtaaaattttagttgtcacaaaaattatcacatatatggatgttcaaataacacaactc 42768387  T

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Target: chr8; HSP #23
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 5 - 67
Target Start/End: Complemental strand, 27854723 - 27854661
Alignment:
Q  5 attttctttgtaaaattttggttgtttcaaaagttgtcatataaatgaatgttcaaataacac 67  Q
    |||||||||||||||||||  |||| | ||||||| ||||  |||||||||||||||||||||    
T  27854723 attttctttgtaaaattttaattgtcttaaaagttatcatgaaaatgaatgttcaaataacac 27854661  T

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Target: chr8; HSP #24
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 7 - 73
Target Start/End: Complemental strand, 36969627 - 36969561
Alignment:
Q  7 tttctttgtaaaattttggttgtttcaaaagttgtcatataaatgaatgttcaaataacacaactct 73  Q
    ||||||||||||| | |||||||  || ||||||||| | ||||| |||||||||||||||||||||    
T  36969627 tttctttgtaaaaatatggttgtcgcataagttgtcaaacaaatggatgttcaaataacacaactct 36969561  T

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Target: chr8; HSP #25
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 6 - 75
Target Start/End: Original strand, 34796499 - 34796568
Alignment:
Q  6 ttttctttgtaaaattttggttgtttcaaaagttgtcatataaatgaatgttcaaataacacaactctta 75  Q
    ||||| || ||||||||||||||| | |||||||||||||||| ||  ||||||||||| | ||||||||    
T  34796499 ttttcgttataaaattttggttgtcttaaaagttgtcatataattggttgttcaaataatataactctta 34796568  T

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Target: chr8; HSP #26
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 5 - 75
Target Start/End: Original strand, 13244322 - 13244392
Alignment:
Q  5 attttctttgtaaaattttggttgtttcaaaagttgtcatataaatgaatgttcaaataacacaactctta 75  Q
    ||||||||| ||||||||||| | |||   |||||||| || |||||| |||| |||||||||||||||||    
T  13244322 attttctttataaaattttggatatttttgaagttgtcgtaaaaatgattgttaaaataacacaactctta 13244392  T

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Target: chr8; HSP #27
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 74
Target Start/End: Complemental strand, 21526239 - 21526165
Alignment:
Q  1 cctcattttctttgtaaaattttggttgtttcaaaagttgtcatat-aaatgaatgttcaaataacacaactctt 74  Q
    |||| |||||||||| ||||| |||||||  |||||||||||| || |||||  |||| ||||||||||||||||    
T  21526239 cctctttttctttgtgaaattatggttgtcccaaaagttgtcaaatcaaatggttgtttaaataacacaactctt 21526165  T

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Target: chr8; HSP #28
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 3 - 69
Target Start/End: Complemental strand, 36816573 - 36816507
Alignment:
Q  3 tcattttctttgtaaaattttggttgtttcaaaagttgtcatataaatgaatgttcaaataacacaa 69  Q
    |||||||||||| ||||||||| || |  |||||||||||| ||| ||  |||||||||||||||||    
T  36816573 tcattttctttgcaaaattttgattatcacaaaagttgtcacatatatagatgttcaaataacacaa 36816507  T

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Target: chr8; HSP #29
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 1 - 66
Target Start/End: Original strand, 36251438 - 36251503
Alignment:
Q  1 cctcattttctttgtaaaattttggttgtttcaaaagttgtcatataaatgaatgttcaaataaca 66  Q
    |||||||| ||||||||||||||| ||||  | |||||| ||| ||| ||| ||||||||||||||    
T  36251438 cctcatttcctttgtaaaattttgattgtcacgaaagttatcacatatatggatgttcaaataaca 36251503  T

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Target: chr8; HSP #30
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 72
Target Start/End: Complemental strand, 5740744 - 5740673
Alignment:
Q  1 cctcattttctttgtaaaattttggttgtttcaaaagttgtc-atataaatgaatgttcaaataacacaactc 72  Q
    |||| |||||||||||||||| |||||||   |||||||||| ||| |||||  |||||||||||||||||||    
T  5740744 cctctttttctttgtaaaattatggttgtcctaaaagttgtctata-aaatggctgttcaaataacacaactc 5740673  T

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Target: chr8; HSP #31
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 6 - 74
Target Start/End: Original strand, 37754679 - 37754747
Alignment:
Q  6 ttttctttgtaaaattttggttgtttcaaaagttgtcatataaatgaatgttcaaataacacaactctt 74  Q
    ||||||||||||| ||   |||||| |||||||||||||| |||||  |||| |||||||||| |||||    
T  37754679 ttttctttgtaaatttaaagttgttccaaaagttgtcatacaaatggttgtttaaataacacacctctt 37754747  T

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Target: scaffold0199 (Bit Score: 46; Significance: 2e-17; HSPs: 1)
Name: scaffold0199
Description:

Target: scaffold0199; HSP #1
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 1 - 74
Target Start/End: Original strand, 8780 - 8853
Alignment:
Q  1 cctcattttctttgtaaaattttggttgtttcaaaagttgtcatataaatgaatgttcaaataacacaactctt 74  Q
    |||||||| ||||||||||||||||||||   ||||||||||| ||| ||| ||||||||||||||||||||||    
T  8780 cctcatttcctttgtaaaattttggttgtcataaaagttgtcagatatatggatgttcaaataacacaactctt 8853  T

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Target: scaffold0056 (Bit Score: 46; Significance: 2e-17; HSPs: 1)
Name: scaffold0056
Description:

Target: scaffold0056; HSP #1
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 1 - 74
Target Start/End: Complemental strand, 76578 - 76505
Alignment:
Q  1 cctcattttctttgtaaaattttggttgtttcaaaagttgtcatataaatgaatgttcaaataacacaactctt 74  Q
    |||||||| ||||||||||||||||||||  |||||||||||| ||| ||| ||||| ||||||||||||||||    
T  76578 cctcatttcctttgtaaaattttggttgtcacaaaagttgtcacatatatggatgttaaaataacacaactctt 76505  T

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Target: scaffold0087 (Bit Score: 43; Significance: 0.000000000000001; HSPs: 1)
Name: scaffold0087
Description:

Target: scaffold0087; HSP #1
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 2 - 72
Target Start/End: Complemental strand, 53319 - 53249
Alignment:
Q  2 ctcattttctttgtaaaattttggttgtttcaaaagttgtcatataaatgaatgttcaaataacacaactc 72  Q
    |||||||||||| |||| |||||||||| | |||| || |||||||||| |||||||||||||||||||||    
T  53319 ctcattttctttataaatttttggttgtctaaaaacttatcatataaataaatgttcaaataacacaactc 53249  T

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Target: scaffold0519 (Bit Score: 41; Significance: 0.00000000000002; HSPs: 1)
Name: scaffold0519
Description:

Target: scaffold0519; HSP #1
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 1 - 73
Target Start/End: Original strand, 11894 - 11966
Alignment:
Q  1 cctcattttctttgtaaaattttggttgtttcaaaagttgtcatataaatgaatgttcaaataacacaactct 73  Q
    |||||||||||||||||||||||||| ||  |||||||||||||||  ||  |||||||||||| ||||||||    
T  11894 cctcattttctttgtaaaattttggtcgtcacaaaagttgtcatatttatagatgttcaaataatacaactct 11966  T

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Target: scaffold0184 (Bit Score: 41; Significance: 0.00000000000002; HSPs: 1)
Name: scaffold0184
Description:

Target: scaffold0184; HSP #1
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 1 - 73
Target Start/End: Complemental strand, 16747 - 16676
Alignment:
Q  1 cctcattttctttgtaaaattttggttgtttcaaaagttgtcatataaatgaatgttcaaataacacaactct 73  Q
    |||||||||||||||||| | ||| |||| | ||||||||||||||||||| |||||||||||||| ||||||    
T  16747 cctcattttctttgtaaa-tgttgattgtcttaaaagttgtcatataaatggatgttcaaataacagaactct 16676  T

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Target: scaffold0078 (Bit Score: 41; Significance: 0.00000000000002; HSPs: 1)
Name: scaffold0078
Description:

Target: scaffold0078; HSP #1
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 1 - 73
Target Start/End: Original strand, 56097 - 56168
Alignment:
Q  1 cctcattttctttgtaaaattttggttgtttcaaaagttgtcatataaatgaatgttcaaataacacaactct 73  Q
    |||||||||||||||||| | ||| |||| | ||||||||||||||||||| |||||||||||||| ||||||    
T  56097 cctcattttctttgtaaa-tgttgattgtcttaaaagttgtcatataaatggatgttcaaataacagaactct 56168  T

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Target: scaffold0098 (Bit Score: 40; Significance: 0.00000000000007; HSPs: 1)
Name: scaffold0098
Description:

Target: scaffold0098; HSP #1
Raw Score: 40; E-Value: 0.00000000000007
Query Start/End: Original strand, 1 - 72
Target Start/End: Original strand, 49407 - 49478
Alignment:
Q  1 cctcattttctttgtaaaattttggttgtttcaaaagttgtcatataaatgaatgttcaaataacacaactc 72  Q
    |||||||| |||||||||||||||||| |  |||||||||||| ||| ||| |||||||||||||| |||||    
T  49407 cctcatttcctttgtaaaattttggttatcacaaaagttgtcacatatatggatgttcaaataacataactc 49478  T

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Target: scaffold0005 (Bit Score: 31; Significance: 0.00000002; HSPs: 1)
Name: scaffold0005
Description:

Target: scaffold0005; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 6 - 68
Target Start/End: Complemental strand, 213804 - 213742
Alignment:
Q  6 ttttctttgtaaaattttggttgtttcaaaagttgtcatataaatgaatgttcaaataacaca 68  Q
    |||||||| |||| || ||||||| |||||| |||||||  |||||| |||||||||||||||    
T  213804 ttttctttataaatttatggttgtctcaaaaattgtcatggaaatgattgttcaaataacaca 213742  T

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Target: scaffold0148 (Bit Score: 30; Significance: 0.00000007; HSPs: 1)
Name: scaffold0148
Description:

Target: scaffold0148; HSP #1
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 5 - 74
Target Start/End: Complemental strand, 20856 - 20787
Alignment:
Q  5 attttctttgtaaaattttggttgtttcaaaagttgtcatataaatgaatgttcaaataacacaactctt 74  Q
    |||||| ||| ||||||||| || |  ||||| || |||| |||||| ||||||||||||||||||||||    
T  20856 attttccttgcaaaattttgattatcacaaaaattatcatttaaatggatgttcaaataacacaactctt 20787  T

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Target: scaffold0019 (Bit Score: 30; Significance: 0.00000007; HSPs: 1)
Name: scaffold0019
Description:

Target: scaffold0019; HSP #1
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 6 - 75
Target Start/End: Complemental strand, 71542 - 71473
Alignment:
Q  6 ttttctttgtaaaattttggttgtttcaaaagttgtcatataaatgaatgttcaaataacacaactctta 75  Q
    |||||||||||||||| |  || | ||||||||| ||| | |||| | ||||||||||||||||||||||    
T  71542 ttttctttgtaaaattataattttatcaaaagttatcaaacaaataattgttcaaataacacaactctta 71473  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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