View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF10186_low_7 (Length: 434)
Name: NF10186_low_7
Description: NF10186
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF10186_low_7 |
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Alignment Details
Target: chr7 (Bit Score: 354; Significance: 0; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 354; E-Value: 0
Query Start/End: Original strand, 18 - 395
Target Start/End: Complemental strand, 32134093 - 32133716
Alignment:
| Q |
18 |
caattctggtcaagagagaaaaccttgattgccagtcaaatattttacagtttcacacagtcggcatattcgtggtcgttggatcgagatagaacacttc |
117 |
Q |
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| T |
32134093 |
caattctggtcgagagagaaaaccttgattgccagtcaaatattttacagattcacacagtcggcatattcgtggtcattggatcgagatagaacacttc |
32133994 |
T |
|
| Q |
118 |
aaattttaatgcaaatttccacatttagtgttcggcaatgccttgaatagtattacctctggttgagggaatttcttggaaaagtgtttaatgactgatg |
217 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
32133993 |
aaattttaatgcaaatttccacatttagtgttcggcaatgccttgaatagtattacctctggttgagggaatttcttggaaaagtgtttaatgactgatg |
32133894 |
T |
|
| Q |
218 |
ggtaaataatgaattcgagcaaactaggctgcatcgttggtcactaggggaatgaggtagcattgacatgaaaatttggtttattttcttgtgattatag |
317 |
Q |
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||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| |
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| T |
32133893 |
ggtaaataatgaattcgagtaaactaggctgcatcgttggtcactaggggaatgaggtagcattgacatgaaaatttggtttattttcttgtgataatat |
32133794 |
T |
|
| Q |
318 |
attaataatgtatgattttgttctgaacttttacttttgttaataggcttttagttttactggaatgaatttttctca |
395 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
32133793 |
attaataatgtatgattttgttctgaacttttacttttgttaataggcttttagttttactggaatgaatttttctca |
32133716 |
T |
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