View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF10186_low_8 (Length: 426)

Name: NF10186_low_8
Description: NF10186
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF10186_low_8
NF10186_low_8
[»] scaffold0347 (2 HSPs)
scaffold0347 (155-327)||(13607-13779)
scaffold0347 (159-299)||(14551-14691)
[»] chr7 (57 HSPs)
chr7 (157-327)||(38643550-38643720)
chr7 (14-156)||(6361802-6361944)
chr7 (155-289)||(38644628-38644762)
chr7 (157-297)||(4227132-4227272)
chr7 (157-293)||(12643100-12643236)
chr7 (158-293)||(12644097-12644232)
chr7 (157-299)||(45915766-45915908)
chr7 (157-293)||(4226125-4226261)
chr7 (157-293)||(45914526-45914660)
chr7 (157-289)||(47558030-47558162)
chr7 (157-257)||(7158231-7158331)
chr7 (157-257)||(12930772-12930872)
chr7 (157-293)||(27479987-27480123)
chr7 (157-257)||(12929287-12929387)
chr7 (157-234)||(37284109-37284186)
chr7 (164-293)||(22661364-22661493)
chr7 (157-234)||(37289333-37289410)
chr7 (248-298)||(24388910-24388960)
chr7 (248-301)||(3914229-3914282)
chr7 (248-293)||(17102111-17102156)
chr7 (248-293)||(27396887-27396932)
chr7 (248-293)||(27991830-27991875)
chr7 (248-301)||(28469292-28469345)
chr7 (248-293)||(30948421-30948466)
chr7 (248-301)||(32053427-32053480)
chr7 (248-293)||(32680856-32680901)
chr7 (248-301)||(40379860-40379913)
chr7 (248-301)||(42731510-42731563)
chr7 (157-273)||(27480731-27480847)
chr7 (164-234)||(31695637-31695707)
chr7 (248-301)||(10935885-10935938)
chr7 (248-293)||(32298997-32299042)
chr7 (248-293)||(34928911-34928956)
chr7 (248-293)||(39686795-39686840)
chr7 (248-301)||(45010689-45010742)
chr7 (248-293)||(45010896-45010941)
chr7 (243-295)||(13311323-13311375)
chr7 (248-292)||(22871570-22871614)
chr7 (215-295)||(47559026-47559106)
chr7 (234-293)||(17886782-17886841)
chr7 (178-257)||(27558136-27558215)
chr7 (248-289)||(2640474-2640515)
chr7 (248-293)||(6253562-6253607)
chr7 (248-289)||(6571104-6571145)
chr7 (172-257)||(7159213-7159297)
chr7 (248-293)||(19204580-19204625)
chr7 (248-289)||(23181290-23181331)
chr7 (248-299)||(5457193-5457244)
chr7 (254-301)||(37656949-37656996)
chr7 (164-234)||(40022552-40022621)
chr7 (171-224)||(12929461-12929514)
chr7 (248-293)||(15714584-15714629)
chr7 (236-293)||(32688510-32688567)
chr7 (248-301)||(42019881-42019934)
chr7 (248-293)||(43124444-43124489)
chr7 (243-295)||(11400259-11400311)
chr7 (164-232)||(31694478-31694546)
[»] chr1 (72 HSPs)
chr1 (164-327)||(25064940-25065103)
chr1 (164-299)||(25065916-25066051)
chr1 (157-293)||(13295135-13295271)
chr1 (156-293)||(46282070-46282207)
chr1 (164-297)||(46282753-46282886)
chr1 (158-257)||(2829539-2829645)
chr1 (164-257)||(6344262-6344355)
chr1 (248-301)||(24009825-24009878)
chr1 (164-257)||(32619391-32619484)
chr1 (157-257)||(2828193-2828293)
chr1 (157-293)||(49093041-49093177)
chr1 (155-234)||(51935222-51935301)
chr1 (233-299)||(34850351-34850417)
chr1 (164-269)||(6345625-6345730)
chr1 (248-301)||(6367653-6367706)
chr1 (171-244)||(32622369-32622442)
chr1 (248-301)||(32917351-32917404)
chr1 (233-298)||(34849087-34849152)
chr1 (248-301)||(40210654-40210707)
chr1 (157-229)||(13295608-13295680)
chr1 (243-294)||(10304009-10304060)
chr1 (219-301)||(13914351-13914433)
chr1 (247-293)||(31514578-31514624)
chr1 (247-301)||(37578476-37578530)
chr1 (248-293)||(183483-183528)
chr1 (248-301)||(4960631-4960684)
chr1 (248-301)||(17662134-17662187)
chr1 (248-293)||(24905428-24905473)
chr1 (248-293)||(25647975-25648020)
chr1 (248-293)||(28011454-28011499)
chr1 (248-293)||(33442855-33442900)
chr1 (248-293)||(42248564-42248609)
chr1 (164-273)||(50062932-50063041)
chr1 (240-292)||(16970828-16970880)
chr1 (243-294)||(10304146-10304197)
chr1 (219-301)||(19017913-19017995)
chr1 (243-301)||(21444680-21444738)
chr1 (243-301)||(22103790-22103848)
chr1 (164-234)||(32238706-32238776)
chr1 (243-301)||(42267389-42267447)
chr1 (195-293)||(49093777-49093875)
chr1 (219-293)||(52134130-52134204)
chr1 (248-289)||(1103552-1103593)
chr1 (248-301)||(1841550-1841603)
chr1 (248-293)||(4716729-4716774)
chr1 (220-301)||(13245913-13245994)
chr1 (248-289)||(14879062-14879103)
chr1 (248-293)||(26024514-26024559)
chr1 (248-301)||(30711418-30711471)
chr1 (248-301)||(34464733-34464786)
chr1 (248-301)||(41098824-41098877)
chr1 (248-301)||(43758913-43758966)
chr1 (248-293)||(47999384-47999429)
chr1 (248-292)||(19515910-19515954)
chr1 (248-292)||(36694541-36694585)
chr1 (248-292)||(36710642-36710686)
chr1 (248-292)||(40772598-40772642)
chr1 (186-257)||(10019657-10019728)
chr1 (250-292)||(23209620-23209662)
chr1 (243-301)||(27999135-27999193)
chr1 (248-290)||(35152434-35152476)
chr1 (164-234)||(52563658-52563728)
chr1 (157-237)||(28534817-28534896)
chr1 (251-299)||(48691242-48691290)
chr1 (178-257)||(33347700-33347779)
chr1 (178-257)||(49002897-49002976)
chr1 (155-257)||(2953748-2953850)
chr1 (248-301)||(44523420-44523473)
chr1 (248-289)||(46163121-46163162)
chr1 (248-301)||(48779208-48779261)
chr1 (200-293)||(50062246-50062339)
chr1 (178-226)||(49003190-49003238)
[»] chr2 (50 HSPs)
chr2 (155-297)||(25624393-25624535)
chr2 (156-293)||(25623287-25623424)
chr2 (157-257)||(24387351-24387451)
chr2 (157-258)||(24388255-24388356)
chr2 (157-234)||(20101770-20101847)
chr2 (157-293)||(29957817-29957953)
chr2 (155-293)||(20983225-20983363)
chr2 (248-301)||(15848179-15848232)
chr2 (157-234)||(20103167-20103244)
chr2 (248-301)||(37895631-37895684)
chr2 (157-257)||(20982524-20982624)
chr2 (155-293)||(29958511-29958649)
chr2 (248-293)||(6657969-6658014)
chr2 (248-293)||(14900744-14900789)
chr2 (248-293)||(16099146-16099191)
chr2 (164-257)||(19620793-19620886)
chr2 (248-293)||(33739794-33739839)
chr2 (248-301)||(36382252-36382305)
chr2 (248-301)||(39423606-39423659)
chr2 (248-293)||(39498401-39498446)
chr2 (248-301)||(44714045-44714098)
chr2 (248-292)||(11163316-11163360)
chr2 (243-301)||(11689627-11689685)
chr2 (248-301)||(2318249-2318302)
chr2 (248-301)||(10712814-10712867)
chr2 (248-293)||(13995934-13995979)
chr2 (248-293)||(33062311-33062356)
chr2 (248-301)||(34447904-34447956)
chr2 (248-301)||(36479809-36479862)
chr2 (248-301)||(36755184-36755237)
chr2 (248-293)||(41248820-41248865)
chr2 (243-294)||(17266484-17266535)
chr2 (164-230)||(7983837-7983903)
chr2 (243-301)||(10840562-10840620)
chr2 (243-301)||(11721374-11721432)
chr2 (164-234)||(33882895-33882965)
chr2 (164-230)||(43236511-43236577)
chr2 (248-289)||(1696005-1696046)
chr2 (180-257)||(28599450-28599527)
chr2 (233-301)||(3653364-3653432)
chr2 (248-292)||(45556203-45556247)
chr2 (250-293)||(6846877-6846920)
chr2 (248-289)||(6573137-6573178)
chr2 (248-301)||(6577561-6577614)
chr2 (180-257)||(9694026-9694103)
chr2 (248-301)||(22051278-22051330)
chr2 (248-293)||(25892485-25892530)
chr2 (265-297)||(3122664-3122696)
chr2 (178-230)||(7981068-7981120)
chr2 (157-257)||(43681856-43681956)
[»] chr5 (74 HSPs)
chr5 (157-293)||(22870426-22870562)
chr5 (164-293)||(22869612-22869741)
chr5 (157-293)||(20856932-20857068)
chr5 (164-297)||(36476772-36476905)
chr5 (164-293)||(36477340-36477469)
chr5 (157-257)||(14744730-14744830)
chr5 (157-293)||(20857511-20857647)
chr5 (157-238)||(31107931-31108012)
chr5 (157-234)||(8654107-8654184)
chr5 (157-293)||(20072833-20072969)
chr5 (157-257)||(21978971-21979071)
chr5 (155-293)||(20072119-20072257)
chr5 (155-293)||(39181760-39181898)
chr5 (248-301)||(35512239-35512292)
chr5 (164-310)||(16532900-16533046)
chr5 (248-301)||(5024302-5024355)
chr5 (164-257)||(21978017-21978110)
chr5 (164-257)||(31108338-31108430)
chr5 (248-301)||(32242333-32242386)
chr5 (248-301)||(38442159-38442212)
chr5 (157-273)||(39181057-39181173)
chr5 (156-310)||(16533572-16533726)
chr5 (248-294)||(38475290-38475336)
chr5 (248-293)||(297275-297320)
chr5 (248-293)||(3529134-3529179)
chr5 (248-301)||(5993980-5994033)
chr5 (248-293)||(6758126-6758171)
chr5 (243-300)||(14848992-14849049)
chr5 (248-293)||(41930607-41930652)
chr5 (248-292)||(28269681-28269725)
chr5 (248-292)||(28771131-28771175)
chr5 (248-292)||(31482664-31482708)
chr5 (248-290)||(14194718-14194760)
chr5 (248-298)||(24547412-24547462)
chr5 (248-293)||(1506058-1506103)
chr5 (248-289)||(8322495-8322536)
chr5 (164-241)||(8673774-8673851)
chr5 (248-301)||(11047528-11047581)
chr5 (248-301)||(13362512-13362565)
chr5 (248-301)||(13962955-13963008)
chr5 (248-301)||(19892592-19892645)
chr5 (248-301)||(20840624-20840677)
chr5 (248-293)||(27587239-27587284)
chr5 (248-289)||(29646658-29646699)
chr5 (248-289)||(35920480-35920521)
chr5 (248-289)||(39453391-39453432)
chr5 (248-292)||(6150545-6150589)
chr5 (243-298)||(15644999-15645054)
chr5 (178-257)||(21260886-21260965)
chr5 (171-234)||(21972104-21972166)
chr5 (243-301)||(12904840-12904898)
chr5 (248-294)||(16083068-16083114)
chr5 (195-257)||(39402148-39402210)
chr5 (248-301)||(186510-186563)
chr5 (248-293)||(11761840-11761885)
chr5 (248-301)||(16157139-16157192)
chr5 (248-301)||(17202490-17202543)
chr5 (248-301)||(18247175-18247228)
chr5 (248-301)||(20814419-20814472)
chr5 (248-292)||(18670290-18670334)
chr5 (186-257)||(8323085-8323156)
chr5 (178-257)||(14745469-14745548)
chr5 (158-257)||(18934714-18934813)
chr5 (158-257)||(25253087-25253186)
chr5 (158-257)||(25316877-25316976)
chr5 (247-301)||(14194513-14194567)
chr5 (171-224)||(12990912-12990965)
chr5 (171-224)||(13064533-13064586)
chr5 (248-301)||(40150098-40150151)
chr5 (243-287)||(14848825-14848869)
chr5 (157-257)||(25253370-25253470)
chr5 (157-257)||(25317161-25317261)
chr5 (261-301)||(27937303-27937343)
chr5 (157-257)||(32052508-32052608)
[»] chr4 (67 HSPs)
chr4 (157-293)||(23455653-23455789)
chr4 (157-293)||(23454954-23455090)
chr4 (164-293)||(38982560-38982689)
chr4 (157-257)||(53477080-53477180)
chr4 (155-248)||(54591587-54591680)
chr4 (157-293)||(56556582-56556718)
chr4 (158-293)||(56557289-56557424)
chr4 (155-293)||(38813552-38813690)
chr4 (157-232)||(13336863-13336938)
chr4 (219-293)||(4982987-4983061)
chr4 (219-301)||(14801798-14801880)
chr4 (164-234)||(54590150-54590220)
chr4 (248-301)||(34765664-34765717)
chr4 (157-293)||(38814291-38814427)
chr4 (157-293)||(52816387-52816523)
chr4 (247-301)||(16605692-16605746)
chr4 (247-301)||(24349764-24349818)
chr4 (248-294)||(44967329-44967375)
chr4 (255-301)||(53129790-53129836)
chr4 (248-293)||(9145027-9145072)
chr4 (248-293)||(13058128-13058173)
chr4 (248-293)||(23613400-23613445)
chr4 (248-293)||(27934623-27934668)
chr4 (248-301)||(35028282-35028335)
chr4 (248-293)||(36009105-36009150)
chr4 (248-293)||(42738292-42738337)
chr4 (248-293)||(43155788-43155833)
chr4 (248-293)||(49879468-49879513)
chr4 (243-300)||(52298112-52298169)
chr4 (248-301)||(53701903-53701956)
chr4 (164-232)||(22882352-22882420)
chr4 (164-232)||(22934016-22934084)
chr4 (157-293)||(52815663-52815799)
chr4 (157-257)||(55013089-55013188)
chr4 (251-301)||(17356206-17356256)
chr4 (237-299)||(48528552-48528614)
chr4 (248-293)||(5369038-5369083)
chr4 (248-293)||(9400780-9400825)
chr4 (248-301)||(15507957-15508010)
chr4 (248-293)||(18831440-18831485)
chr4 (248-293)||(22566890-22566935)
chr4 (248-293)||(24711202-24711247)
chr4 (248-293)||(32950233-32950278)
chr4 (248-293)||(33247534-33247579)
chr4 (248-293)||(34837335-34837380)
chr4 (248-301)||(37976437-37976490)
chr4 (248-289)||(50418933-50418974)
chr4 (248-301)||(52909344-52909397)
chr4 (243-299)||(48529862-48529918)
chr4 (164-227)||(9254413-9254476)
chr4 (248-291)||(37248327-37248370)
chr4 (243-298)||(41583518-41583573)
chr4 (247-301)||(10781768-10781822)
chr4 (248-294)||(16005929-16005975)
chr4 (248-293)||(38012261-38012306)
chr4 (248-292)||(35508533-35508577)
chr4 (248-288)||(54086992-54087032)
chr4 (243-298)||(40387553-40387608)
chr4 (171-226)||(50246173-50246228)
chr4 (243-301)||(7280390-7280448)
chr4 (247-301)||(14802019-14802073)
chr4 (171-224)||(22249940-22249993)
chr4 (248-301)||(24411449-24411502)
chr4 (248-289)||(51692644-51692685)
chr4 (248-293)||(55867406-55867451)
chr4 (237-293)||(8439516-8439572)
chr4 (249-301)||(54435381-54435433)
[»] chr3 (58 HSPs)
chr3 (157-293)||(32717069-32717205)
chr3 (164-310)||(29192042-29192188)
chr3 (157-289)||(29192961-29193093)
chr3 (157-293)||(2943913-2944049)
chr3 (164-293)||(37249206-37249335)
chr3 (193-293)||(32716285-32716385)
chr3 (164-293)||(37249762-37249890)
chr3 (157-257)||(22736690-22736790)
chr3 (155-293)||(45279248-45279386)
chr3 (164-257)||(44481953-44482046)
chr3 (157-293)||(48189063-48189199)
chr3 (248-301)||(23458263-23458316)
chr3 (157-293)||(2944630-2944766)
chr3 (183-293)||(1756576-1756686)
chr3 (155-273)||(11026616-11026734)
chr3 (219-301)||(33689663-33689745)
chr3 (171-293)||(48188392-48188514)
chr3 (164-293)||(45278551-45278680)
chr3 (157-257)||(1757304-1757404)
chr3 (243-301)||(41988048-41988106)
chr3 (248-298)||(51994173-51994223)
chr3 (248-293)||(2796270-2796315)
chr3 (248-293)||(8041707-8041752)
chr3 (248-293)||(10770752-10770797)
chr3 (248-301)||(26463882-26463935)
chr3 (248-301)||(33156278-33156331)
chr3 (248-293)||(36314559-36314604)
chr3 (248-301)||(40758235-40758288)
chr3 (248-293)||(48322638-48322683)
chr3 (248-293)||(54466514-54466559)
chr3 (171-234)||(44476063-44476126)
chr3 (171-273)||(43105818-43105920)
chr3 (248-289)||(9294254-9294295)
chr3 (248-293)||(19741184-19741229)
chr3 (248-292)||(46474906-46474950)
chr3 (247-301)||(9367831-9367885)
chr3 (171-257)||(21255815-21255901)
chr3 (243-301)||(30380932-30380990)
chr3 (243-301)||(39399376-39399434)
chr3 (248-294)||(40033747-40033793)
chr3 (243-301)||(54317915-54317973)
chr3 (195-292)||(11025975-11026072)
chr3 (248-289)||(43384374-43384415)
chr3 (248-293)||(55052540-55052585)
chr3 (157-257)||(1741387-1741487)
chr3 (243-301)||(4521765-4521824)
chr3 (243-298)||(44654790-44654845)
chr3 (243-301)||(20704611-20704669)
chr3 (243-288)||(20704516-20704561)
chr3 (171-224)||(21300340-21300393)
chr3 (248-289)||(40506083-40506124)
chr3 (233-293)||(42854511-42854569)
chr3 (183-244)||(43105259-43105320)
chr3 (186-259)||(46670537-46670610)
chr3 (178-259)||(55036690-55036771)
chr3 (233-293)||(21185987-21186047)
chr3 (201-257)||(22735403-22735459)
chr3 (237-301)||(23458059-23458123)
[»] chr8 (66 HSPs)
chr8 (158-257)||(1231527-1231626)
chr8 (157-293)||(34213764-34213900)
chr8 (169-257)||(7393145-7393233)
chr8 (157-257)||(25288076-25288176)
chr8 (157-257)||(38598964-38599064)
chr8 (157-234)||(33497639-33497716)
chr8 (157-257)||(1232799-1232897)
chr8 (157-293)||(34665770-34665906)
chr8 (157-297)||(34214488-34214629)
chr8 (155-257)||(24377179-24377281)
chr8 (248-301)||(16388810-16388863)
chr8 (248-301)||(36928567-36928620)
chr8 (249-301)||(31608797-31608849)
chr8 (164-234)||(24379019-24379089)
chr8 (171-241)||(33497030-33497100)
chr8 (248-294)||(38862709-38862755)
chr8 (248-293)||(1425314-1425359)
chr8 (248-293)||(3041717-3041762)
chr8 (164-257)||(4970132-4970225)
chr8 (248-301)||(13186151-13186204)
chr8 (248-293)||(23663806-23663851)
chr8 (248-301)||(35756673-35756726)
chr8 (248-301)||(36186351-36186404)
chr8 (248-293)||(36325325-36325370)
chr8 (248-293)||(38845560-38845605)
chr8 (248-301)||(39071767-39071820)
chr8 (248-293)||(40775911-40775956)
chr8 (248-293)||(44407118-44407163)
chr8 (157-228)||(4463455-4463526)
chr8 (247-294)||(12199210-12199257)
chr8 (247-294)||(12443638-12443685)
chr8 (164-234)||(29574749-29574819)
chr8 (183-293)||(34666505-34666614)
chr8 (248-293)||(2266583-2266628)
chr8 (248-301)||(4405944-4405997)
chr8 (248-293)||(8316880-8316925)
chr8 (248-293)||(22915650-22915695)
chr8 (248-289)||(23698540-23698581)
chr8 (248-292)||(35449871-35449915)
chr8 (248-291)||(12273147-12273190)
chr8 (199-257)||(7392250-7392308)
chr8 (154-224)||(27436560-27436630)
chr8 (243-301)||(31873183-31873241)
chr8 (248-294)||(38955794-38955840)
chr8 (248-297)||(2534786-2534835)
chr8 (248-293)||(11674786-11674830)
chr8 (248-301)||(40318248-40318301)
chr8 (233-293)||(8747556-8747616)
chr8 (249-301)||(22890278-22890330)
chr8 (243-301)||(11291195-11291253)
chr8 (243-301)||(24085860-24085918)
chr8 (164-230)||(36574824-36574890)
chr8 (171-224)||(547642-547695)
chr8 (248-297)||(2535838-2535887)
chr8 (248-285)||(4994957-4994994)
chr8 (180-257)||(9632351-9632428)
chr8 (155-224)||(27437552-27437621)
chr8 (248-297)||(34177258-34177307)
chr8 (171-224)||(36623560-36623613)
chr8 (171-224)||(37342989-37343042)
chr8 (171-224)||(43866835-43866888)
chr8 (220-300)||(9499883-9499962)
chr8 (178-226)||(26740033-26740081)
chr8 (164-232)||(29575910-29575978)
chr8 (247-299)||(30712003-30712055)
chr8 (247-299)||(30719780-30719832)
[»] scaffold0009 (2 HSPs)
scaffold0009 (157-257)||(261001-261101)
scaffold0009 (157-259)||(262439-262541)
[»] chr6 (35 HSPs)
chr6 (157-297)||(4117507-4117647)
chr6 (157-292)||(14656480-14656615)
chr6 (157-295)||(4116799-4116937)
chr6 (157-257)||(17784385-17784485)
chr6 (157-257)||(33401126-33401226)
chr6 (164-234)||(8427388-8427458)
chr6 (155-293)||(33399964-33400102)
chr6 (171-273)||(1661414-1661516)
chr6 (157-293)||(14657173-14657309)
chr6 (248-301)||(12080727-12080780)
chr6 (248-301)||(21627997-21628050)
chr6 (248-293)||(28000646-28000691)
chr6 (248-293)||(30337540-30337585)
chr6 (248-301)||(30803952-30804005)
chr6 (248-301)||(33517625-33517678)
chr6 (243-301)||(1215150-1215208)
chr6 (219-301)||(30725821-30725903)
chr6 (219-301)||(33647025-33647107)
chr6 (248-293)||(363091-363136)
chr6 (248-301)||(3059348-3059401)
chr6 (248-293)||(14196876-14196921)
chr6 (248-293)||(17734455-17734500)
chr6 (233-299)||(26463255-26463321)
chr6 (243-301)||(33648749-33648807)
chr6 (154-226)||(738012-738084)
chr6 (154-254)||(8427197-8427297)
chr6 (157-257)||(15819774-15819874)
chr6 (233-301)||(24210607-24210675)
chr6 (158-257)||(3299843-3299942)
chr6 (154-224)||(3299749-3299819)
chr6 (178-224)||(19296441-19296487)
chr6 (248-293)||(25486189-25486232)
chr6 (248-301)||(11392929-11392982)
chr6 (157-257)||(5064335-5064435)
chr6 (178-226)||(9607631-9607679)
[»] scaffold1493 (1 HSPs)
scaffold1493 (157-257)||(593-693)
[»] scaffold0182 (2 HSPs)
scaffold0182 (157-238)||(14396-14477)
scaffold0182 (157-234)||(13134-13211)
[»] scaffold0018 (1 HSPs)
scaffold0018 (156-257)||(73108-73209)
[»] scaffold0005 (2 HSPs)
scaffold0005 (219-301)||(37847-37929)
scaffold0005 (247-301)||(37654-37708)
[»] scaffold0031 (1 HSPs)
scaffold0031 (248-301)||(69056-69109)
[»] scaffold0020 (1 HSPs)
scaffold0020 (247-293)||(139762-139808)
[»] scaffold0559 (1 HSPs)
scaffold0559 (248-293)||(1324-1369)
[»] scaffold0024 (1 HSPs)
scaffold0024 (248-293)||(141855-141900)
[»] scaffold0007 (1 HSPs)
scaffold0007 (248-293)||(1860-1905)
[»] scaffold0205 (1 HSPs)
scaffold0205 (248-293)||(21230-21275)
[»] scaffold0295 (1 HSPs)
scaffold0295 (248-292)||(2234-2278)
[»] scaffold0279 (1 HSPs)
scaffold0279 (178-257)||(10874-10953)
[»] scaffold0008 (1 HSPs)
scaffold0008 (248-299)||(239837-239888)


Alignment Details
Target: scaffold0347 (Bit Score: 133; Significance: 5e-69; HSPs: 2)
Name: scaffold0347
Description:

Target: scaffold0347; HSP #1
Raw Score: 133; E-Value: 5e-69
Query Start/End: Original strand, 155 - 327
Target Start/End: Original strand, 13607 - 13779
Alignment:
Q  155 ttggcttacatatgcatttcattcctgcaattataggtcatttgatttttcatccatgagcttactaatcctcccattttacccttgtaaaaattaatca 254  Q
    |||||||| ||||||||||||| |||||||||||||| ||||||||||||||||| |||||||||||||||| ||||||| ||| | |||||||||||||    
T  13607 ttggcttaaatatgcatttcatccctgcaattataggccatttgatttttcatccctgagcttactaatccttccattttgcccctataaaaattaatca 13706  T
Q  255 tttaagatttcgtccctctccccacttaatcactgccacatcactaagtcagcaaattaggggttgtgttgac 327  Q
    |||||||||||||||||||||||||||||||||| |||| |||||||||||||||||||||||||||||||||    
T  13707 tttaagatttcgtccctctccccacttaatcactaccacgtcactaagtcagcaaattaggggttgtgttgac 13779  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0347; HSP #2
Raw Score: 113; E-Value: 4e-57
Query Start/End: Original strand, 159 - 299
Target Start/End: Complemental strand, 14691 - 14551
Alignment:
Q  159 cttacatatgcatttcattcctgcaattataggtcatttgatttttcatccatgagcttactaatcctcccattttacccttgtaaaaattaatcattta 258  Q
    |||| ||||||||||||||||| |||||||||| ||||||||||||||||| |||||||||||||||||||||||| ||| | |||||||||||||||||    
T  14691 cttaaatatgcatttcattccttcaattataggccatttgatttttcatccctgagcttactaatcctcccattttgcccctataaaaattaatcattta 14592  T
Q  259 agatttcgtccctctccccacttaatcactgccacatcact 299  Q
    |||||||||||||||||||||||||||||||||||||||||    
T  14591 agatttcgtccctctccccacttaatcactgccacatcact 14551  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 123; Significance: 5e-63; HSPs: 57)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 123; E-Value: 5e-63
Query Start/End: Original strand, 157 - 327
Target Start/End: Original strand, 38643550 - 38643720
Alignment:
Q  157 ggcttacatatgcatttcattcctgcaattataggtcatttgatttttcatccatgagcttactaatcctcccattttacccttgtaaaaattaatcatt 256  Q
    |||||| ||||||||||||| |||||||||||||| ||||||||||||||||| ||| |||||||||||||||||||| | | |||||||||||||||||    
T  38643550 ggcttaaatatgcatttcatccctgcaattataggccatttgatttttcatccttgaccttactaatcctcccattttgctcctgtaaaaattaatcatt 38643649  T
Q  257 taagatttcgtccctctccccacttaatcactgccacatcactaagtcagcaaattaggggttgtgttgac 327  Q
    |||||||||||||||||||||||||||| |||| ||| ||||||| |||||||||||||||||||||||||    
T  38643650 taagatttcgtccctctccccacttaattactgtcacgtcactaattcagcaaattaggggttgtgttgac 38643720  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 115; E-Value: 3e-58
Query Start/End: Original strand, 14 - 156
Target Start/End: Original strand, 6361802 - 6361944
Alignment:
Q  14 cagagacaatttcctatatttgccgcgcattctgcaacatattgagtgatctaaaattgtagccacgatttccttcaataatttacatggaatcttgaga 113  Q
    ||||||||||||||||||||||||||||||| ||| ||||||||||||||||||||||||||||||  ||||||||||||||||||||||||||||||||    
T  6361802 cagagacaatttcctatatttgccgcgcattgtgctacatattgagtgatctaaaattgtagccacagtttccttcaataatttacatggaatcttgaga 6361901  T
Q  114 agttttggtttaaccaatcgaaagtagctttatgttgtgaatt 156  Q
      ||| |||||||||||||||||||||||||||||||||||||    
T  6361902 cctttgggtttaaccaatcgaaagtagctttatgttgtgaatt 6361944  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 95; E-Value: 2e-46
Query Start/End: Original strand, 155 - 289
Target Start/End: Complemental strand, 38644762 - 38644628
Alignment:
Q  155 ttggcttacatatgcatttcattcctgcaattataggtcatttgatttttcatccatgagcttactaatcctcccattttacccttgtaaaaattaatca 254  Q
    |||||||| ||||||||||||||| ||||||||||||||||||||||||| |||| | |||||| ||||||| |||||||  ||||||||||||||||||    
T  38644762 ttggcttaaatatgcatttcattcttgcaattataggtcatttgattttttatccctaagcttattaatccttccattttgaccttgtaaaaattaatca 38644663  T
Q  255 tttaagatttcgtccctctccccacttaatcactg 289  Q
    ||||||||||| |||||||||||||||||||||||    
T  38644662 tttaagatttcatccctctccccacttaatcactg 38644628  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 157 - 297
Target Start/End: Complemental strand, 4227272 - 4227132
Alignment:
Q  157 ggcttacatatgcatttcattcctgcaattataggtcatttgatttttcatccatgagcttactaatcctcccattttacccttgtaaaaattaatcatt 256  Q
    |||||| ||||||||||||| |||| ||||||||| ||||||||||||||||| ||||||||||||||||||||||||  || |||||||||||| ||||    
T  4227272 ggcttaaatatgcatttcatccctgtaattataggccatttgatttttcatccttgagcttactaatcctcccattttgtccctgtaaaaattaaccatt 4227173  T
Q  257 taagatttcgtccctctccccacttaatcactgccacatca 297  Q
    ||| |||||||||||||  ||  ||||||||||||||||||    
T  4227172 taaaatttcgtccctctttccggttaatcactgccacatca 4227132  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 157 - 293
Target Start/End: Original strand, 12643100 - 12643236
Alignment:
Q  157 ggcttacatatgcatttcattcctgcaattataggtcatttgatttttcatccatgagcttactaatcctcccattttacccttgtaaaaattaatcatt 256  Q
    |||||| ||||||||||||| |||| ||||||||| ||||||||||||||||  |||||||||||||||||||||||||||| || ||||||||| ||||    
T  12643100 ggcttaaatatgcatttcatccctgtaattataggccatttgatttttcatctctgagcttactaatcctcccattttacccctgcaaaaattaaccatt 12643199  T
Q  257 taagatttcgtccctctccccacttaatcactgccac 293  Q
    ||| ||||||||||||| |||  ||||||||||||||    
T  12643200 taaaatttcgtccctcttcccgattaatcactgccac 12643236  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 84; E-Value: 9e-40
Query Start/End: Original strand, 158 - 293
Target Start/End: Complemental strand, 12644232 - 12644097
Alignment:
Q  158 gcttacatatgcatttcattcctgcaattataggtcatttgatttttcatccatgagcttactaatcctcccattttacccttgtaaaaattaatcattt 257  Q
    ||||| ||||||||||||| |||  ||||| ||| ||||||||||||||||| |||||||||||||||||||||||||| | ||||||||||||||||||    
T  12644232 gcttaaatatgcatttcatccctataattacaggccatttgatttttcatccctgagcttactaatcctcccattttactcctgtaaaaattaatcattt 12644133  T
Q  258 aagatttcgtccctctccccacttaatcactgccac 293  Q
    || ||||||||||||| |||  ||||||||||||||    
T  12644132 aaaatttcgtccctcttcccggttaatcactgccac 12644097  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 83; E-Value: 4e-39
Query Start/End: Original strand, 157 - 299
Target Start/End: Complemental strand, 45915908 - 45915766
Alignment:
Q  157 ggcttacatatgcatttcattcctgcaattataggtcatttgatttttcatccatgagcttactaatcctcccattttacccttgtaaaaattaatcatt 256  Q
    |||||| ||||||||||||| |||| ||||||||| ||||||||||||||||| | |||||||||||||||| ||||||||| |||||||||||||||||    
T  45915908 ggcttaaatatgcatttcatccctgtaattataggccatttgatttttcatccctaagcttactaatcctcctattttacccctgtaaaaattaatcatt 45915809  T
Q  257 taagatttcgtccctctccccacttaatcactgccacatcact 299  Q
    ||| ||| |||||||||  ||  |||||||||||||| |||||    
T  45915808 taaaattccgtccctctttccgattaatcactgccacgtcact 45915766  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 81; E-Value: 5e-38
Query Start/End: Original strand, 157 - 293
Target Start/End: Original strand, 4226125 - 4226261
Alignment:
Q  157 ggcttacatatgcatttcattcctgcaattataggtcatttgatttttcatccatgagcttactaatcctcccattttacccttgtaaaaattaatcatt 256  Q
    |||||| ||||||||||||| |||| ||||||||| ||||||||| |||| ||||||||||||||||||| ||||||| ||| |||||||||||||||||    
T  4226125 ggcttaaatatgcatttcatccctgtaattataggccatttgattcttcaaccatgagcttactaatccttccattttgcccctgtaaaaattaatcatt 4226224  T
Q  257 taagatttcgtccctctccccacttaatcactgccac 293  Q
    ||| ||||||||| ||| |||  ||||||||||||||    
T  4226225 taaaatttcgtccttcttcccggttaatcactgccac 4226261  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 69; E-Value: 8e-31
Query Start/End: Original strand, 157 - 293
Target Start/End: Original strand, 45914526 - 45914660
Alignment:
Q  157 ggcttacatatgcatttcattcctgcaattataggtcatttgatttttcatccatgagcttactaatcctcccattttacccttgtaaaaattaatcatt 256  Q
    |||||| |||||||||||||  ||| ||||||||| ||||||||||||||||| | ||||||||||| ||| |||||| ||| |||||||||||||||||    
T  45914526 ggcttaaatatgcatttcatctctgtaattataggccatttgatttttcatccctaagcttactaat-ctctcattttgccc-tgtaaaaattaatcatt 45914623  T
Q  257 taagatttcgtccctctccccacttaatcactgccac 293  Q
    ||| ||||||||||||| |||  ||||||||||||||    
T  45914624 taaaatttcgtccctcttcccgattaatcactgccac 45914660  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 69; E-Value: 8e-31
Query Start/End: Original strand, 157 - 289
Target Start/End: Original strand, 47558030 - 47558162
Alignment:
Q  157 ggcttacatatgcatttcattcctgcaattataggtcatttgatttttcatccatgagcttactaatcctcccattttacccttgtaaaaattaatcatt 256  Q
    |||||| |||||||||||||  ||  |||||||||  |||||||||||||||| |||| ||||||||||||||||||| ||| |||||||||||| ||||    
T  47558030 ggcttaaatatgcatttcatctctttaattataggctatttgatttttcatccctgagtttactaatcctcccattttgcccctgtaaaaattaaccatt 47558129  T
Q  257 taagatttcgtccctctccccacttaatcactg 289  Q
    ||| ||||||||||||| |||  ||||||||||    
T  47558130 taaaatttcgtccctcttcccgattaatcactg 47558162  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 157 - 257
Target Start/End: Original strand, 7158231 - 7158331
Alignment:
Q  157 ggcttacatatgcatttcattcctgcaattataggtcatttgatttttcatccatgagcttactaatcctcccattttacccttgtaaaaattaatcatt 256  Q
    |||||| ||||||||||||| ||| |||||||||| ||||||||||||||||||||| |||||||||||| ||||||| ||| |||||| ||||||||||    
T  7158231 ggcttaaatatgcatttcatccctacaattataggccatttgatttttcatccatgaacttactaatccttccattttgcccctgtaaatattaatcatt 7158330  T
Q  257 t 257  Q
    |    
T  7158331 t 7158331  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 157 - 257
Target Start/End: Original strand, 12930772 - 12930872
Alignment:
Q  157 ggcttacatatgcatttcattcctgcaattataggtcatttgatttttcatccatgagcttactaatcctcccattttacccttgtaaaaattaatcatt 256  Q
    |||||| ||||||||||||| |||||||||||||||||||||||||||||||| ||| |||||||||||| ||||||| ||| || ||| ||||||||||    
T  12930772 ggcttaaatatgcatttcatccctgcaattataggtcatttgatttttcatccctgaacttactaatccttccattttgcccctgcaaatattaatcatt 12930871  T
Q  257 t 257  Q
    |    
T  12930872 t 12930872  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 61; E-Value: 5e-26
Query Start/End: Original strand, 157 - 293
Target Start/End: Original strand, 27479987 - 27480123
Alignment:
Q  157 ggcttacatatgcatttcattcctgcaattataggtcatttgatttttcatccatgagcttactaatcctcccattttacccttgtaaaaattaatcatt 256  Q
    |||||| |||||| |||||| |||||||||||||| |  |||||||||||||| |||||||||||||||||| ||||| ||| |||||  | ||||||||    
T  27479987 ggcttaaatatgcttttcatccctgcaattataggccgcttgatttttcatccctgagcttactaatcctcctattttgcccctgtaattactaatcatt 27480086  T
Q  257 taagatttcgtccctctccccacttaatcactgccac 293  Q
    | | | ||||||||||| ||||  |||||||||||||    
T  27480087 tgaaagttcgtccctcttcccagataatcactgccac 27480123  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 157 - 257
Target Start/End: Original strand, 12929287 - 12929387
Alignment:
Q  157 ggcttacatatgcatttcattcctgcaattataggtcatttgatttttcatccatgagcttactaatcctcccattttacccttgtaaaaattaatcatt 256  Q
    |||||| ||||||||||||| ||||||| ||||||  |||||||||||||||| ||| |||||||||||||||||||| ||| || ||| ||||||||||    
T  12929287 ggcttaaatatgcatttcatccctgcaaatataggctatttgatttttcatccctgaacttactaatcctcccattttgcccctgcaaatattaatcatt 12929386  T
Q  257 t 257  Q
    |    
T  12929387 t 12929387  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 157 - 234
Target Start/End: Original strand, 37284109 - 37284186
Alignment:
Q  157 ggcttacatatgcatttcattcctgcaattataggtcatttgatttttcatccatgagcttactaatcctcccatttt 234  Q
    |||||| |||||| |||||| |||| ||||||||| ||||||||||||||||| ||||||||||||||||||||||||    
T  37284109 ggcttaaatatgcttttcatccctgtaattataggccatttgatttttcatccctgagcttactaatcctcccatttt 37284186  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 164 - 293
Target Start/End: Original strand, 22661364 - 22661493
Alignment:
Q  164 atatgcatttcattcctgcaattataggtcatttgatttttcatccatgagcttactaatcctcccattttacccttgtaaaaattaatcatttaagatt 263  Q
    |||||| |||||| |||| ||||||||| | ||||||||||||||| ||| |||||||||||| ||||||| ||| |||||  | ||||||||| | | |    
T  22661364 atatgcttttcatccctgtaattataggccgtttgatttttcatccttgaacttactaatccttccattttgcccctgtaattactaatcatttgaaagt 22661463  T
Q  264 tcgtccctctccccacttaatcactgccac 293  Q
    |||||||||| |||   |||||||||||||    
T  22661464 tcgtccctcttcccggataatcactgccac 22661493  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 157 - 234
Target Start/End: Complemental strand, 37289410 - 37289333
Alignment:
Q  157 ggcttacatatgcatttcattcctgcaattataggtcatttgatttttcatccatgagcttactaatcctcccatttt 234  Q
    |||||| |||||| |||||| |||| ||||||||| |||||| |||||||||| ||||||||||||||||||||||||    
T  37289410 ggcttaaatatgcttttcatccctgtaattataggccatttggtttttcatccctgagcttactaatcctcccatttt 37289333  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 248 - 298
Target Start/End: Original strand, 24388910 - 24388960
Alignment:
Q  248 ttaatcatttaagatttcgtccctctccccacttaatcactgccacatcac 298  Q
    ||||||| |||| ||||||||||||||||||||||||||||||||||||||    
T  24388910 ttaatcacttaaaatttcgtccctctccccacttaatcactgccacatcac 24388960  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 248 - 301
Target Start/End: Original strand, 3914229 - 3914282
Alignment:
Q  248 ttaatcatttaagatttcgtccctctccccacttaatcactgccacatcactaa 301  Q
    |||||||||||| ||||||||||||| || ||||||||||||||||||||||||    
T  3914229 ttaatcatttaaaatttcgtccctcttccaacttaatcactgccacatcactaa 3914282  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 248 - 293
Target Start/End: Original strand, 17102111 - 17102156
Alignment:
Q  248 ttaatcatttaagatttcgtccctctccccacttaatcactgccac 293  Q
    |||||||||||| |||||||||||||||||||||||||||||||||    
T  17102111 ttaatcatttaaaatttcgtccctctccccacttaatcactgccac 17102156  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 248 - 293
Target Start/End: Complemental strand, 27396932 - 27396887
Alignment:
Q  248 ttaatcatttaagatttcgtccctctccccacttaatcactgccac 293  Q
    |||||||||||| |||||||||||||||||||||||||||||||||    
T  27396932 ttaatcatttaaaatttcgtccctctccccacttaatcactgccac 27396887  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 248 - 293
Target Start/End: Original strand, 27991830 - 27991875
Alignment:
Q  248 ttaatcatttaagatttcgtccctctccccacttaatcactgccac 293  Q
    |||||||||||| |||||||||||||||||||||||||||||||||    
T  27991830 ttaatcatttaaaatttcgtccctctccccacttaatcactgccac 27991875  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 248 - 301
Target Start/End: Complemental strand, 28469345 - 28469292
Alignment:
Q  248 ttaatcatttaagatttcgtccctctccccacttaatcactgccacatcactaa 301  Q
    |||||||||||| |||||||||||||||||||||||||||| |||| |||||||    
T  28469345 ttaatcatttaaaatttcgtccctctccccacttaatcactaccacgtcactaa 28469292  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 248 - 293
Target Start/End: Complemental strand, 30948466 - 30948421
Alignment:
Q  248 ttaatcatttaagatttcgtccctctccccacttaatcactgccac 293  Q
    |||||||||||| |||||||||||||||||||||||||||||||||    
T  30948466 ttaatcatttaaaatttcgtccctctccccacttaatcactgccac 30948421  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 248 - 301
Target Start/End: Complemental strand, 32053480 - 32053427
Alignment:
Q  248 ttaatcatttaagatttcgtccctctccccacttaatcactgccacatcactaa 301  Q
    |||||||||||| ||||||||||||||||||||||||||||| ||| |||||||    
T  32053480 ttaatcatttaaaatttcgtccctctccccacttaatcactgtcacgtcactaa 32053427  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 248 - 293
Target Start/End: Complemental strand, 32680901 - 32680856
Alignment:
Q  248 ttaatcatttaagatttcgtccctctccccacttaatcactgccac 293  Q
    |||||||||||| |||||||||||||||||||||||||||||||||    
T  32680901 ttaatcatttaaaatttcgtccctctccccacttaatcactgccac 32680856  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 248 - 301
Target Start/End: Original strand, 40379860 - 40379913
Alignment:
Q  248 ttaatcatttaagatttcgtccctctccccacttaatcactgccacatcactaa 301  Q
    |||||||||||| |||||||||||||||||||||||||| |||||| |||||||    
T  40379860 ttaatcatttaaaatttcgtccctctccccacttaatcaatgccacgtcactaa 40379913  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 248 - 301
Target Start/End: Original strand, 42731510 - 42731563
Alignment:
Q  248 ttaatcatttaagatttcgtccctctccccacttaatcactgccacatcactaa 301  Q
    |||||||||||| ||||||||||||||||||||||||||||||||  |||||||    
T  42731510 ttaatcatttaaaatttcgtccctctccccacttaatcactgccatgtcactaa 42731563  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 157 - 273
Target Start/End: Complemental strand, 27480847 - 27480731
Alignment:
Q  157 ggcttacatatgcatttcattcctgcaattataggtcatttgatttttcatccatgagcttactaatcctcccattttacccttgtaaaaattaatcatt 256  Q
    |||||| |||||  |||||| |||| ||||||||| | ||||||||||||||| |||  ||||||||||| ||||||| ||| |||||  | ||||||||    
T  27480847 ggcttaaatatgtttttcatccctgtaattataggccgtttgatttttcatccttgattttactaatccttccattttgcccctgtaattactaatcatt 27480748  T
Q  257 taagatttcgtccctct 273  Q
    | | | |||||||||||    
T  27480747 tgaaagttcgtccctct 27480731  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 164 - 234
Target Start/End: Complemental strand, 31695707 - 31695637
Alignment:
Q  164 atatgcatttcattcctgcaattataggtcatttgatttttcatccatgagcttactaatcctcccatttt 234  Q
    ||||||||||||| ||||||| ||||||||||||||  |||||||| | | |||||||||||| |||||||    
T  31695707 atatgcatttcatccctgcaaatataggtcatttgaaatttcatccctaaacttactaatccttccatttt 31695637  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 248 - 301
Target Start/End: Original strand, 10935885 - 10935938
Alignment:
Q  248 ttaatcatttaagatttcgtccctctccccacttaatcactgccacatcactaa 301  Q
    |||||||||||| |||||||||||||| |||||||||||||||||  |||||||    
T  10935885 ttaatcatttaaaatttcgtccctctctccacttaatcactgccatgtcactaa 10935938  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 248 - 293
Target Start/End: Complemental strand, 32299042 - 32298997
Alignment:
Q  248 ttaatcatttaagatttcgtccctctccccacttaatcactgccac 293  Q
    ||||||||| || |||||||||||||||||||||||||||||||||    
T  32299042 ttaatcattgaaaatttcgtccctctccccacttaatcactgccac 32298997  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 248 - 293
Target Start/End: Complemental strand, 34928956 - 34928911
Alignment:
Q  248 ttaatcatttaagatttcgtccctctccccacttaatcactgccac 293  Q
    |||||| ||||| |||||||||||||||||||||||||||||||||    
T  34928956 ttaatcgtttaaaatttcgtccctctccccacttaatcactgccac 34928911  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 248 - 293
Target Start/End: Complemental strand, 39686840 - 39686795
Alignment:
Q  248 ttaatcatttaagatttcgtccctctccccacttaatcactgccac 293  Q
    |||||| ||||| |||||||||||||||||||||||||||||||||    
T  39686840 ttaatcgtttaaaatttcgtccctctccccacttaatcactgccac 39686795  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 248 - 301
Target Start/End: Original strand, 45010689 - 45010742
Alignment:
Q  248 ttaatcatttaagatttcgtccctctccccacttaatcactgccacatcactaa 301  Q
    |||||||||||| ||||||||| ||||||||||||||||||||||  |||||||    
T  45010689 ttaatcatttaaaatttcgtccatctccccacttaatcactgccaagtcactaa 45010742  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 248 - 293
Target Start/End: Complemental strand, 45010941 - 45010896
Alignment:
Q  248 ttaatcatttaagatttcgtccctctccccacttaatcactgccac 293  Q
    |||||||||||| |||||||| ||||||||||||||||||||||||    
T  45010941 ttaatcatttaaaatttcgtctctctccccacttaatcactgccac 45010896  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 243 - 295
Target Start/End: Complemental strand, 13311375 - 13311323
Alignment:
Q  243 aaaaattaatcatttaagatttcgtccctctccccacttaatcactgccacat 295  Q
    |||| ||||| |||||| |||||||||||||||| ||||||||||||||||||    
T  13311375 aaaatttaataatttaaaatttcgtccctctcccgacttaatcactgccacat 13311323  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 248 - 292
Target Start/End: Complemental strand, 22871614 - 22871570
Alignment:
Q  248 ttaatcatttaagatttcgtccctctccccacttaatcactgcca 292  Q
    |||||||||||| ||||| ||||||||||||||||||||||||||    
T  22871614 ttaatcatttaaaatttcttccctctccccacttaatcactgcca 22871570  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 215 - 295
Target Start/End: Complemental strand, 47559106 - 47559026
Alignment:
Q  215 cttactaatcctcccattttacccttgtaaaaattaatcatttaagatttcgtccctctccccacttaatcactgccacat 295  Q
    ||||||||||||||||||||  || |||||||||||| ||||||| |||| || ||||||| |  ||||||||| ||||||    
T  47559106 cttactaatcctcccattttctccctgtaaaaattaaccatttaaaattttgttcctctcctcggttaatcacttccacat 47559026  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 234 - 293
Target Start/End: Complemental strand, 17886841 - 17886782
Alignment:
Q  234 tacccttgtaaaaattaatcatttaagatttcgtccctctccccacttaatcactgccac 293  Q
    |||||||| ||| ||||||||||||| |||||||||||   |||||||||||||||||||    
T  17886841 tacccttgcaaatattaatcatttaaaatttcgtcccttgacccacttaatcactgccac 17886782  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 178 - 257
Target Start/End: Complemental strand, 27558215 - 27558136
Alignment:
Q  178 cctgcaattataggtcatttgatttttcatccatgagcttactaatcctcccattttacccttgtaaaaattaatcattt 257  Q
    ||||||| |||||||||||||| ||||| |||| ||  ||||||||||| ||||||| || ||| ||| |||||||||||    
T  27558215 cctgcaaatataggtcatttgaattttcgtccacgaagttactaatccttccattttgccattgcaaatattaatcattt 27558136  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 248 - 289
Target Start/End: Complemental strand, 2640515 - 2640474
Alignment:
Q  248 ttaatcatttaagatttcgtccctctccccacttaatcactg 289  Q
    |||||||||||| |||||||| ||||||||||||||||||||    
T  2640515 ttaatcatttaaaatttcgtctctctccccacttaatcactg 2640474  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 248 - 293
Target Start/End: Original strand, 6253562 - 6253607
Alignment:
Q  248 ttaatcatttaagatttcgtccctctccccacttaatcactgccac 293  Q
    |||||||||||| |||||||||||||| ||||||||||| ||||||    
T  6253562 ttaatcatttaaaatttcgtccctctctccacttaatcaatgccac 6253607  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 248 - 289
Target Start/End: Original strand, 6571104 - 6571145
Alignment:
Q  248 ttaatcatttaagatttcgtccctctccccacttaatcactg 289  Q
    |||||||||||| |||| ||||||||||||||||||||||||    
T  6571104 ttaatcatttaaaattttgtccctctccccacttaatcactg 6571145  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 172 - 257
Target Start/End: Complemental strand, 7159297 - 7159213
Alignment:
Q  172 ttcattcctgcaattataggtcatttgatttttcatccatgagcttactaatcctcccattttacccttgtaaaaattaatcattt 257  Q
    ||||| ||||||| ||||| |||||||| ||||| | | |||  ||||||||||||||||||||||| || ||| |||||||||||    
T  7159297 ttcatccctgcaaatatagatcatttgaattttcgttcctgaagttactaatcctcccattttaccc-tgcaaatattaatcattt 7159213  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 248 - 293
Target Start/End: Original strand, 19204580 - 19204625
Alignment:
Q  248 ttaatcatttaagatttcgtccctctccccacttaatcactgccac 293  Q
    |||||||||||| |||| ||||||||||||||||||||| ||||||    
T  19204580 ttaatcatttaaaattttgtccctctccccacttaatcattgccac 19204625  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #47
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 248 - 289
Target Start/End: Complemental strand, 23181331 - 23181290
Alignment:
Q  248 ttaatcatttaagatttcgtccctctccccacttaatcactg 289  Q
    |||||||||||| |||||||||||||| ||||||||||||||    
T  23181331 ttaatcatttaaaatttcgtccctctctccacttaatcactg 23181290  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #48
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 248 - 299
Target Start/End: Complemental strand, 5457244 - 5457193
Alignment:
Q  248 ttaatcatttaagatttcgtccctctccccacttaatcactgccacatcact 299  Q
    |||||||||||| ||||||||||||  |||| |||||||||||||| |||||    
T  5457244 ttaatcatttaaaatttcgtccctcatcccagttaatcactgccacgtcact 5457193  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #49
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 254 - 301
Target Start/End: Original strand, 37656949 - 37656996
Alignment:
Q  254 atttaagatttcgtccctctccccacttaatcactgccacatcactaa 301  Q
    |||||| ||||||||||||||||||||||||||| | ||| |||||||    
T  37656949 atttaaaatttcgtccctctccccacttaatcaccggcacgtcactaa 37656996  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #50
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 164 - 234
Target Start/End: Complemental strand, 40022621 - 40022552
Alignment:
Q  164 atatgcatttcattcctgcaattataggtcatttgatttttcatccatgagcttactaatcctcccatttt 234  Q
    ||||| ||||||| ||||||| ||||| ||||||||  |||||||| ||| |||||||||||| |||||||    
T  40022621 atatgtatttcatccctgcaaatatag-tcatttgaaatttcatccctgatcttactaatccttccatttt 40022552  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #51
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 171 - 224
Target Start/End: Original strand, 12929461 - 12929514
Alignment:
Q  171 tttcattcctgcaattataggtcatttgatttttcatccatgagcttactaatc 224  Q
    |||||| ||||||| |||||||||||||| ||||| |||||||  |||||||||    
T  12929461 tttcatccctgcaaatataggtcatttgaattttcgtccatgaagttactaatc 12929514  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #52
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 248 - 293
Target Start/End: Complemental strand, 15714629 - 15714584
Alignment:
Q  248 ttaatcatttaagatttcgtccctctccccacttaatcactgccac 293  Q
    ||||||| |||| ||||||| |||||||| ||||||||||||||||    
T  15714629 ttaatcacttaacatttcgttcctctccctacttaatcactgccac 15714584  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #53
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 236 - 293
Target Start/End: Complemental strand, 32688567 - 32688510
Alignment:
Q  236 cccttgtaaaaattaatcatttaagatttcgtccctctccccacttaatcactgccac 293  Q
    |||||| ||| ||||||||||||| |||||||||||   |||||||||| ||||||||    
T  32688567 cccttgcaaatattaatcatttaaaatttcgtcccttgacccacttaataactgccac 32688510  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #54
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 248 - 301
Target Start/End: Complemental strand, 42019934 - 42019881
Alignment:
Q  248 ttaatcatttaagatttcgtccctctccccacttaatcactgccacatcactaa 301  Q
    ||||| |||||| |||||||| |||||| ||||||||||||||||  |||||||    
T  42019934 ttaattatttaaaatttcgtctctctcctcacttaatcactgccatgtcactaa 42019881  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #55
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 248 - 293
Target Start/End: Complemental strand, 43124489 - 43124444
Alignment:
Q  248 ttaatcatttaagatttcgtccctctccccacttaatcactgccac 293  Q
    |||||||||||| ||||||||||| | |||| ||||||||||||||    
T  43124489 ttaatcatttaaaatttcgtccctattcccagttaatcactgccac 43124444  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #56
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 243 - 295
Target Start/End: Complemental strand, 11400311 - 11400259
Alignment:
Q  243 aaaaattaatcatttaagatttcgtccctctccccacttaatcactgccacat 295  Q
    |||| |||||||||||| ||||  || ||||||||||||||||||| ||||||    
T  11400311 aaaatttaatcatttaaaatttattctctctccccacttaatcacttccacat 11400259  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #57
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 164 - 232
Target Start/End: Original strand, 31694478 - 31694546
Alignment:
Q  164 atatgcatttcattcctgcaattataggtcatttgatttttcatccatgagcttactaatcctcccatt 232  Q
    ||||||||||||| ||||||| |||||  |||||||  |||||||| | |  |||||||||||||||||    
T  31694478 atatgcatttcatccctgcaaatatagtccatttgaaatttcatccctaaatttactaatcctcccatt 31694546  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 112; Significance: 2e-56; HSPs: 72)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 112; E-Value: 2e-56
Query Start/End: Original strand, 164 - 327
Target Start/End: Original strand, 25064940 - 25065103
Alignment:
Q  164 atatgcatttcattcctgcaattataggtcatttgatttttcatccatgagcttactaatcctcccattttacccttgtaaaaattaatcatttaagatt 263  Q
    ||||||||||||| ||||||||||||||| |||||||||||||||| ||| |||||||||||||||||| |  || | ||||||||||||||||||||||    
T  25064940 atatgcatttcatccctgcaattataggtaatttgatttttcatccctgatcttactaatcctcccattctgtccctataaaaattaatcatttaagatt 25065039  T
Q  264 tcgtccctctccccacttaatcactgccacatcactaagtcagcaaattaggggttgtgttgac 327  Q
    |||||||||||| ||||| ||||||||||| ||||||||||||||||||||||| |||||||||    
T  25065040 tcgtccctctcctcacttgatcactgccacgtcactaagtcagcaaattagggggtgtgttgac 25065103  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 96; E-Value: 6e-47
Query Start/End: Original strand, 164 - 299
Target Start/End: Complemental strand, 25066051 - 25065916
Alignment:
Q  164 atatgcatttcattcctgcaattataggtcatttgatttttcatccatgagcttactaatcctcccattttacccttgtaaaaattaatcatttaagatt 263  Q
    ||||||||||||| |||  ||||||| | ||||||||||||||||| |||||||||||||||| ||||||||||| ||||||||||||||||||||||||    
T  25066051 atatgcatttcatccctataattataagccatttgatttttcatccctgagcttactaatccttccattttacccctgtaaaaattaatcatttaagatt 25065952  T
Q  264 tcgtccctctccccacttaatcactgccacatcact 299  Q
    ||||||||||| |||||||||||||||||| |||||    
T  25065951 tcgtccctctctccacttaatcactgccacctcact 25065916  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 157 - 293
Target Start/End: Original strand, 13295135 - 13295271
Alignment:
Q  157 ggcttacatatgcatttcattcctgcaattataggtcatttgatttttcatccatgagcttactaatcctcccattttacccttgtaaaaattaatcatt 256  Q
    |||||| ||||||||||||  |||| |||||||||||||||||||||||| || |||||||||||||||| ||||||| |||||||||||||||||||||    
T  13295135 ggcttaaatatgcatttcacccctgtaattataggtcatttgatttttcacccctgagcttactaatccttccattttgcccttgtaaaaattaatcatt 13295234  T
Q  257 taagatttcgtccctctccccacttaatcactgccac 293  Q
    ||| || |||||||||| |||  ||||||||||||||    
T  13295235 taaaatgtcgtccctcttcccggttaatcactgccac 13295271  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 156 - 293
Target Start/End: Original strand, 46282070 - 46282207
Alignment:
Q  156 tggcttacatatgcatttcattcctgcaattataggtcatttgatttttcatccatgagcttactaatcctcccattttacccttgtaaaaattaatcat 255  Q
    ||||||| |||||  |||||| |||| ||||||||||| ||||||||||||||| ||| |||||||||||| ||||||| ||| |||||  | |||||||    
T  46282070 tggcttaaatatgtttttcatccctgtaattataggtcgtttgatttttcatccctgaacttactaatccttccattttgcccctgtaattactaatcat 46282169  T
Q  256 ttaagatttcgtccctctccccacttaatcactgccac 293  Q
    || | | ||||||||||| |||   |||||||||||||    
T  46282170 ttgaaagttcgtccctcttcccggataatcactgccac 46282207  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 164 - 297
Target Start/End: Complemental strand, 46282886 - 46282753
Alignment:
Q  164 atatgcatttcattcctgcaattataggtcatttgatttttcatccatgagcttactaatcctcccattttacccttgtaaaaattaatcatttaagatt 263  Q
    |||||| |||||| |||| ||||||||| | ||||||||||||||| ||| |||||||||||| ||||||| ||| |||||  | ||||||||| | | |    
T  46282886 atatgcttttcatccctgtaattataggccgtttgatttttcatccctgaacttactaatccttccattttgcccctgtaattactaatcatttgaaagt 46282787  T
Q  264 tcgtccctctccccacttaatcactgccacatca 297  Q
    |||||||||| |||   |||||||||||||||||    
T  46282786 tcgtccctcttcccggataatcactgccacatca 46282753  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 158 - 257
Target Start/End: Complemental strand, 2829645 - 2829539
Alignment:
Q  158 gcttacatatgcatttcattcctgcaattataggtcatttgat-------ttttcatccatgagcttactaatcctcccattttacccttgtaaaaatta 250  Q
    ||||| ||||||||||||| ||| |||||||||||||||||||       ||||||||| |||||||||||||||||||||||||||| || ||| ||||    
T  2829645 gcttaaatatgcatttcatccctacaattataggtcatttgatatttgatttttcatccttgagcttactaatcctcccattttacccctgcaaatatta 2829546  T
Q  251 atcattt 257  Q
    |||||||    
T  2829545 atcattt 2829539  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 164 - 257
Target Start/End: Original strand, 6344262 - 6344355
Alignment:
Q  164 atatgcatttcattcctgcaattataggtcatttgatttttcatccatgagcttactaatcctcccattttacccttgtaaaaattaatcattt 257  Q
    ||||||||||||| |||| |||||  ||||||||||  |||||||||||| |||||||||||||||||||| |||||| ||| ||||| |||||    
T  6344262 atatgcatttcatccctgtaattaggggtcatttgaaatttcatccatgaacttactaatcctcccattttgcccttgcaaatattaaacattt 6344355  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 248 - 301
Target Start/End: Complemental strand, 24009878 - 24009825
Alignment:
Q  248 ttaatcatttaagatttcgtccctctccccacttaatcactgccacatcactaa 301  Q
    |||||||||||| |||||||||||||||||||||||||||||||||||||||||    
T  24009878 ttaatcatttaaaatttcgtccctctccccacttaatcactgccacatcactaa 24009825  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 164 - 257
Target Start/End: Original strand, 32619391 - 32619484
Alignment:
Q  164 atatgcatttcattcctgcaattataggtcatttgatttttcatccatgagcttactaatcctcccattttacccttgtaaaaattaatcattt 257  Q
    |||||| |||||| |||| |||||| || ||||||||||||||||| |||||||||||||||||||||||| ||| |||||  | |||||||||    
T  32619391 atatgcttttcatccctgtaattatgggccatttgatttttcatccctgagcttactaatcctcccattttgcccctgtaattactaatcattt 32619484  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 157 - 257
Target Start/End: Original strand, 2828193 - 2828293
Alignment:
Q  157 ggcttacatatgcatttcattcctgcaattataggtcatttgatttttcatccatgagcttactaatcctcccattttacccttgtaaaaattaatcatt 256  Q
    |||||| ||||||||||||| | ||||||||||| |||||||||||||||||||| | |||||||||||| | ||||| ||  || ||| ||||||||||    
T  2828193 ggcttaaatatgcatttcatccttgcaattatagatcatttgatttttcatccataaacttactaatccttctattttgcctctgcaaatattaatcatt 2828292  T
Q  257 t 257  Q
    |    
T  2828293 t 2828293  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 157 - 293
Target Start/End: Original strand, 49093041 - 49093177
Alignment:
Q  157 ggcttacatatgcatttcattcctgcaattataggtcatttgatttttcatccatgagcttactaatcctcccattttacccttgtaaaaattaatcatt 256  Q
    |||||| | |||| |||||| |||| ||||||||| | ||||||||||||||| ||| |||||||||||| ||||||| ||| |||||  | ||||||||    
T  49093041 ggcttaaacatgcttttcatccctgtaattataggccgtttgatttttcatccctgaacttactaatccttccattttgcccatgtaattactaatcatt 49093140  T
Q  257 taagatttcgtccctctccccacttaatcactgccac 293  Q
    | | | ||||||||||| |||   |||||||||||||    
T  49093141 tgaaagttcgtccctcttcccggataatcactgccac 49093177  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 155 - 234
Target Start/End: Complemental strand, 51935301 - 51935222
Alignment:
Q  155 ttggcttacatatgcatttcattcctgcaattataggtcatttgatttttcatccatgagcttactaatcctcccatttt 234  Q
    |||||||| |||||| |||||| | || ||||||| ||||||||||||||||||| ||||||| ||||||||||||||||    
T  51935301 ttggcttaaatatgcttttcatccatgtaattatatgtcatttgatttttcatccctgagctttctaatcctcccatttt 51935222  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 233 - 299
Target Start/End: Complemental strand, 34850417 - 34850351
Alignment:
Q  233 ttacccttgtaaaaattaatcatttaagatttcgtccctctccccacttaatcactgccacatcact 299  Q
    ||||||||| |||| |||||||||||| ||||| ||||||||||||||||||||||||||| |||||    
T  34850417 ttacccttgcaaaatttaatcatttaaaatttcatccctctccccacttaatcactgccacgtcact 34850351  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 164 - 269
Target Start/End: Complemental strand, 6345730 - 6345625
Alignment:
Q  164 atatgcatttcattcctgcaattataggtcatttgatttttcatccatgagcttactaatcctcccattttacccttgtaaaaattaatcatttaagatt 263  Q
    ||||||||||||| ||||||||||  ||||||||||  |||||||| ||| |||||||||||| ||||||| ||| || ||| ||||| ||||||| |||    
T  6345730 atatgcatttcatccctgcaattaggggtcatttgaaatttcatccctgaacttactaatccttccattttgcccctgcaaatattaagcatttaaaatt 6345631  T
Q  264 tcgtcc 269  Q
    | ||||    
T  6345630 tagtcc 6345625  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 248 - 301
Target Start/End: Original strand, 6367653 - 6367706
Alignment:
Q  248 ttaatcatttaagatttcgtccctctccccacttaatcactgccacatcactaa 301  Q
    |||||||||||| ||||||||||||||||||||||||||||||||| |||||||    
T  6367653 ttaatcatttaaaatttcgtccctctccccacttaatcactgccacgtcactaa 6367706  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 171 - 244
Target Start/End: Complemental strand, 32622442 - 32622369
Alignment:
Q  171 tttcattcctgcaattataggtcatttgatttttcatccatgagcttactaatcctcccattttacccttgtaa 244  Q
    |||||| |||| |||||| || ||||||||||||||||| |||||||||||||||||||||||| ||| |||||    
T  32622442 tttcatccctgtaattatgggccatttgatttttcatccctgagcttactaatcctcccattttgcccctgtaa 32622369  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 248 - 301
Target Start/End: Original strand, 32917351 - 32917404
Alignment:
Q  248 ttaatcatttaagatttcgtccctctccccacttaatcactgccacatcactaa 301  Q
    |||||||||||| |||||||| ||||||||||||||||||||||||||||||||    
T  32917351 ttaatcatttaaaatttcgtctctctccccacttaatcactgccacatcactaa 32917404  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 233 - 298
Target Start/End: Original strand, 34849087 - 34849152
Alignment:
Q  233 ttacccttgtaaaaattaatcatttaagatttcgtccctctccccacttaatcactgccacatcac 298  Q
    ||||||||| |||| |||||||||||| ||||||||||||||||| ||||||||||||||| ||||    
T  34849087 ttacccttgcaaaatttaatcatttaaaatttcgtccctctcccctcttaatcactgccacgtcac 34849152  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 248 - 301
Target Start/End: Complemental strand, 40210707 - 40210654
Alignment:
Q  248 ttaatcatttaagatttcgtccctctccccacttaatcactgccacatcactaa 301  Q
    |||||||||||| ||||||||||||||||||||||||||||||||| |||||||    
T  40210707 ttaatcatttaaaatttcgtccctctccccacttaatcactgccacgtcactaa 40210654  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 157 - 229
Target Start/End: Complemental strand, 13295680 - 13295608
Alignment:
Q  157 ggcttacatatgcatttcattcctgcaattataggtcatttgatttttcatccatgagcttactaatcctccc 229  Q
    |||||| ||||||||||||| |||| ||||||||| ||||||||||||||||  |||||||||||| ||||||    
T  13295680 ggcttaaatatgcatttcatccctgtaattataggccatttgatttttcatctctgagcttactaaccctccc 13295608  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 243 - 294
Target Start/End: Original strand, 10304009 - 10304060
Alignment:
Q  243 aaaaattaatcatttaagatttcgtccctctccccacttaatcactgccaca 294  Q
    |||| |||||||||||| ||||||||||||||||||||||||||||||||||    
T  10304009 aaaatttaatcatttaaaatttcgtccctctccccacttaatcactgccaca 10304060  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 219 - 301
Target Start/End: Complemental strand, 13914433 - 13914351
Alignment:
Q  219 ctaatcctcccattttacccttgtaaaaattaatcatttaagatttcgtccctctccccacttaatcactgccacatcactaa 301  Q
    ||||||||  || ||||||||||||    |||||||||||| |||||||||||||||||||| |||||||||||| |||||||    
T  13914433 ctaatcctggcaatttacccttgtattgtttaatcatttaaaatttcgtccctctccccactaaatcactgccacgtcactaa 13914351  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 247 - 293
Target Start/End: Complemental strand, 31514624 - 31514578
Alignment:
Q  247 attaatcatttaagatttcgtccctctccccacttaatcactgccac 293  Q
    ||||||||||||| |||||||||||||||||||||||||||||||||    
T  31514624 attaatcatttaaaatttcgtccctctccccacttaatcactgccac 31514578  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 247 - 301
Target Start/End: Complemental strand, 37578530 - 37578476
Alignment:
Q  247 attaatcatttaagatttcgtccctctccccacttaatcactgccacatcactaa 301  Q
    ||||||||||||| |||||||| |||||||||||||||||||||||| |||||||    
T  37578530 attaatcatttaaaatttcgtcactctccccacttaatcactgccacgtcactaa 37578476  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 248 - 293
Target Start/End: Complemental strand, 183528 - 183483
Alignment:
Q  248 ttaatcatttaagatttcgtccctctccccacttaatcactgccac 293  Q
    |||||||||||| |||||||||||||||||||||||||||||||||    
T  183528 ttaatcatttaaaatttcgtccctctccccacttaatcactgccac 183483  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 248 - 301
Target Start/End: Original strand, 4960631 - 4960684
Alignment:
Q  248 ttaatcatttaagatttcgtccctctccccacttaatcactgccacatcactaa 301  Q
    |||||||||||| ||||||||||||| ||||||||||||||||||| |||||||    
T  4960631 ttaatcatttaaaatttcgtccctcttcccacttaatcactgccacgtcactaa 4960684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 248 - 301
Target Start/End: Complemental strand, 17662187 - 17662134
Alignment:
Q  248 ttaatcatttaagatttcgtccctctccccacttaatcactgccacatcactaa 301  Q
    |||||||||||| ||||||||||||| ||||||||||||||||||| |||||||    
T  17662187 ttaatcatttaaaatttcgtccctcttcccacttaatcactgccacgtcactaa 17662134  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 248 - 293
Target Start/End: Complemental strand, 24905473 - 24905428
Alignment:
Q  248 ttaatcatttaagatttcgtccctctccccacttaatcactgccac 293  Q
    |||||||||||| |||||||||||||||||||||||||||||||||    
T  24905473 ttaatcatttaaaatttcgtccctctccccacttaatcactgccac 24905428  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 248 - 293
Target Start/End: Original strand, 25647975 - 25648020
Alignment:
Q  248 ttaatcatttaagatttcgtccctctccccacttaatcactgccac 293  Q
    |||||||||||| |||||||||||||||||||||||||||||||||    
T  25647975 ttaatcatttaaaatttcgtccctctccccacttaatcactgccac 25648020  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 248 - 293
Target Start/End: Original strand, 28011454 - 28011499
Alignment:
Q  248 ttaatcatttaagatttcgtccctctccccacttaatcactgccac 293  Q
    |||||||||||| |||||||||||||||||||||||||||||||||    
T  28011454 ttaatcatttaaaatttcgtccctctccccacttaatcactgccac 28011499  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 248 - 293
Target Start/End: Complemental strand, 33442900 - 33442855
Alignment:
Q  248 ttaatcatttaagatttcgtccctctccccacttaatcactgccac 293  Q
    |||||||||||| |||||||||||||||||||||||||||||||||    
T  33442900 ttaatcatttaaaatttcgtccctctccccacttaatcactgccac 33442855  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 248 - 293
Target Start/End: Original strand, 42248564 - 42248609
Alignment:
Q  248 ttaatcatttaagatttcgtccctctccccacttaatcactgccac 293  Q
    |||||||||||| |||||||||||||||||||||||||||||||||    
T  42248564 ttaatcatttaaaatttcgtccctctccccacttaatcactgccac 42248609  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 164 - 273
Target Start/End: Complemental strand, 50063041 - 50062932
Alignment:
Q  164 atatgcatttcattcctgcaattataggtcatttgatttttcatccatgagcttactaatcctcccattttacccttgtaaaaattaatcatttaagatt 263  Q
    |||||| |||||| |||| ||||||||| | ||||||||||||||| ||| |||||||||||| ||||||| ||  |||||  | ||||||||| | | |    
T  50063041 atatgcttttcatccctgtaattataggccgtttgatttttcatccctgaacttactaatccttccattttgcctctgtaattactaatcatttgaaagt 50062942  T
Q  264 tcgtccctct 273  Q
    ||||||||||    
T  50062941 tcgtccctct 50062932  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 240 - 292
Target Start/End: Complemental strand, 16970880 - 16970828
Alignment:
Q  240 tgtaaaaattaatcatttaagatttcgtccctctccccacttaatcactgcca 292  Q
    ||||||| |||||||||||| |||||||||||||||||||||||||| |||||    
T  16970880 tgtaaaatttaatcatttaaaatttcgtccctctccccacttaatcattgcca 16970828  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 243 - 294
Target Start/End: Complemental strand, 10304197 - 10304146
Alignment:
Q  243 aaaaattaatcatttaagatttcgtccctctccccacttaatcactgccaca 294  Q
    |||| |||||||||||| |||||||| |||||||||||||||||||||||||    
T  10304197 aaaatttaatcatttaaaatttcgtctctctccccacttaatcactgccaca 10304146  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 219 - 301
Target Start/End: Complemental strand, 19017995 - 19017913
Alignment:
Q  219 ctaatcctcccattttacccttgtaaaaattaatcatttaagatttcgtccctctccccacttaatcactgccacatcactaa 301  Q
    ||||||||  || |||||||||| |  | |||||||||||| |||| |||||||| ||||||||||||||||| |||||||||    
T  19017995 ctaatcctggcaatttacccttgcattatttaatcatttaaaattttgtccctcttcccacttaatcactgccgcatcactaa 19017913  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 243 - 301
Target Start/End: Original strand, 21444680 - 21444738
Alignment:
Q  243 aaaaattaatcatttaagatttcgtccctctccccacttaatcactgccacatcactaa 301  Q
    |||| ||||||| |||| ||||||||| ||||||||||||||||||||||| |||||||    
T  21444680 aaaatttaatcacttaaaatttcgtccatctccccacttaatcactgccacgtcactaa 21444738  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 243 - 301
Target Start/End: Complemental strand, 22103848 - 22103790
Alignment:
Q  243 aaaaattaatcatttaagatttcgtccctctccccacttaatcactgccacatcactaa 301  Q
    |||| ||||||| |||| |||||||||||||| |||||||||||||||||| |||||||    
T  22103848 aaaatttaatcacttaaaatttcgtccctctctccacttaatcactgccacgtcactaa 22103790  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 164 - 234
Target Start/End: Original strand, 32238706 - 32238776
Alignment:
Q  164 atatgcatttcattcctgcaattataggtcatttgatttttcatccatgagcttactaatcctcccatttt 234  Q
    ||||||||||||| ||||||| ||||||  ||||||  |||||||| ||| ||||||||||||||||||||    
T  32238706 atatgcatttcatccctgcaaatataggctatttgaaatttcatccctgaacttactaatcctcccatttt 32238776  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 243 - 301
Target Start/End: Original strand, 42267389 - 42267447
Alignment:
Q  243 aaaaattaatcatttaagatttcgtccctctccccacttaatcactgccacatcactaa 301  Q
    |||| |||||||||||| |||||||| ||||||||||||||||||| |||| |||||||    
T  42267389 aaaatttaatcatttaatatttcgtctctctccccacttaatcactaccacgtcactaa 42267447  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 195 - 293
Target Start/End: Complemental strand, 49093875 - 49093777
Alignment:
Q  195 tttgatttttcatccatgagcttactaatcctcccattttacccttgtaaaaattaatcatttaagatttcgtccctctccccacttaatcactgccac 293  Q
    ||||||||||||||| ||| |||||||||||| ||||||| ||| |||||  | ||||||||| | | ||||||||||| |||   |||||||||||||    
T  49093875 tttgatttttcatccctgaacttactaatccttccattttgcccctgtaattactaatcatttgaaagttcgtccctcttcccggataatcactgccac 49093777  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 219 - 293
Target Start/End: Original strand, 52134130 - 52134204
Alignment:
Q  219 ctaatcctcccattttacccttgtaaaaattaatcatttaagatttcgtccctctccccacttaatcactgccac 293  Q
    ||||||||  ||||||| || |||||   |||||| ||||| |||||||||||||||||||||||||||||||||    
T  52134130 ctaatcctggcattttaaccctgtaattgttaatcgtttaaaatttcgtccctctccccacttaatcactgccac 52134204  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 248 - 289
Target Start/End: Original strand, 1103552 - 1103593
Alignment:
Q  248 ttaatcatttaagatttcgtccctctccccacttaatcactg 289  Q
    |||||||||||| |||||||||||||||||||||||||||||    
T  1103552 ttaatcatttaaaatttcgtccctctccccacttaatcactg 1103593  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 248 - 301
Target Start/End: Original strand, 1841550 - 1841603
Alignment:
Q  248 ttaatcatttaagatttcgtccctctccccacttaatcactgccacatcactaa 301  Q
    |||||||||||| |||||||| |||||||||||||||||||||||  |||||||    
T  1841550 ttaatcatttaaaatttcgtcactctccccacttaatcactgccatgtcactaa 1841603  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 248 - 293
Target Start/End: Complemental strand, 4716774 - 4716729
Alignment:
Q  248 ttaatcatttaagatttcgtccctctccccacttaatcactgccac 293  Q
    |||||||||||| |||||||| ||||||||||||||||||||||||    
T  4716774 ttaatcatttaaaatttcgtctctctccccacttaatcactgccac 4716729  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 220 - 301
Target Start/End: Original strand, 13245913 - 13245994
Alignment:
Q  220 taatcctcccattttacccttgtaaaaattaatcatttaagatttcgtccctctccccacttaatcactgccacatcactaa 301  Q
    |||||||  |||||||||||   |||| ||||||| |||| |||| |||||||||||||||||||||||| ||| |||||||    
T  13245913 taatcctggcattttaccctgccaaaatttaatcacttaaaattttgtccctctccccacttaatcactgtcacgtcactaa 13245994  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 248 - 289
Target Start/End: Original strand, 14879062 - 14879103
Alignment:
Q  248 ttaatcatttaagatttcgtccctctccccacttaatcactg 289  Q
    |||||||||||| |||||||||||||||||||||||||||||    
T  14879062 ttaatcatttaaaatttcgtccctctccccacttaatcactg 14879103  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #48
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 248 - 293
Target Start/End: Original strand, 26024514 - 26024559
Alignment:
Q  248 ttaatcatttaagatttcgtccctctccccacttaatcactgccac 293  Q
    |||||||||||| | |||||||||||||||||||||||||||||||    
T  26024514 ttaatcatttaaaagttcgtccctctccccacttaatcactgccac 26024559  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #49
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 248 - 301
Target Start/End: Original strand, 30711418 - 30711471
Alignment:
Q  248 ttaatcatttaagatttcgtccctctccccacttaatcactgccacatcactaa 301  Q
    |||||||||||| |||||||||||| |||||||||||||||||||  |||||||    
T  30711418 ttaatcatttaaaatttcgtccctcgccccacttaatcactgccatgtcactaa 30711471  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #50
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 248 - 301
Target Start/End: Complemental strand, 34464786 - 34464733
Alignment:
Q  248 ttaatcatttaagatttcgtccctctccccacttaatcactgccacatcactaa 301  Q
    |||||||||||| |||| |||||||||||||||||||||||||||  |||||||    
T  34464786 ttaatcatttaaaattttgtccctctccccacttaatcactgccatgtcactaa 34464733  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #51
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 248 - 301
Target Start/End: Original strand, 41098824 - 41098877
Alignment:
Q  248 ttaatcatttaagatttcgtccctctccccacttaatcactgccacatcactaa 301  Q
    |||||||||||| |||| ||||| ||||||||||||||||| ||||||||||||    
T  41098824 ttaatcatttaaaattttgtccccctccccacttaatcactaccacatcactaa 41098877  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #52
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 248 - 301
Target Start/End: Original strand, 43758913 - 43758966
Alignment:
Q  248 ttaatcatttaagatttcgtccctctccccacttaatcactgccacatcactaa 301  Q
    |||||||||||| |||||||||||||| |||||||||||||||||  |||||||    
T  43758913 ttaatcatttaaaatttcgtccctctctccacttaatcactgccatgtcactaa 43758966  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #53
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 248 - 293
Target Start/End: Complemental strand, 47999429 - 47999384
Alignment:
Q  248 ttaatcatttaagatttcgtccctctccccacttaatcactgccac 293  Q
    |||||||||||| || ||||||||||||||||||||||||||||||    
T  47999429 ttaatcatttaaaatatcgtccctctccccacttaatcactgccac 47999384  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #54
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 248 - 292
Target Start/End: Original strand, 19515910 - 19515954
Alignment:
Q  248 ttaatcatttaagatttcgtccctctccccacttaatcactgcca 292  Q
    ||||| |||||| ||||||||||||||||||||||||||||||||    
T  19515910 ttaattatttaaaatttcgtccctctccccacttaatcactgcca 19515954  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #55
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 248 - 292
Target Start/End: Complemental strand, 36694585 - 36694541
Alignment:
Q  248 ttaatcatttaagatttcgtccctctccccacttaatcactgcca 292  Q
    |||||||||||| |||||||| |||||||||||||||||||||||    
T  36694585 ttaatcatttaaaatttcgtctctctccccacttaatcactgcca 36694541  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #56
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 248 - 292
Target Start/End: Complemental strand, 36710686 - 36710642
Alignment:
Q  248 ttaatcatttaagatttcgtccctctccccacttaatcactgcca 292  Q
    |||||||||||| |||||||| |||||||||||||||||||||||    
T  36710686 ttaatcatttaaaatttcgtctctctccccacttaatcactgcca 36710642  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #57
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 248 - 292
Target Start/End: Original strand, 40772598 - 40772642
Alignment:
Q  248 ttaatcatttaagatttcgtccctctccccacttaatcactgcca 292  Q
    |||||||||||| ||||||||||||||||||||||||||| ||||    
T  40772598 ttaatcatttaaaatttcgtccctctccccacttaatcaccgcca 40772642  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #58
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 186 - 257
Target Start/End: Complemental strand, 10019728 - 10019657
Alignment:
Q  186 tataggtcatttgatttttcatccatgagcttactaatcctcccattttacccttgtaaaaattaatcattt 257  Q
    |||||||||||||| ||||||||| |||  ||||||||||| ||||||| || ||| ||| |||||||||||    
T  10019728 tataggtcatttgaattttcatccctgaagttactaatccttccattttgccattgcaaatattaatcattt 10019657  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #59
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 250 - 292
Target Start/End: Complemental strand, 23209662 - 23209620
Alignment:
Q  250 aatcatttaagatttcgtccctctccccacttaatcactgcca 292  Q
    |||||||||  ||||||||||||||||||||||||||||||||    
T  23209662 aatcatttacaatttcgtccctctccccacttaatcactgcca 23209620  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #60
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 243 - 301
Target Start/End: Complemental strand, 27999193 - 27999135
Alignment:
Q  243 aaaaattaatcatttaagatttcgtccctctccccacttaatcactgccacatcactaa 301  Q
    |||| |||||||||| | |||||||| |||| ||||||||||||||||||| |||||||    
T  27999193 aaaatttaatcattttaaatttcgtctctcttcccacttaatcactgccacctcactaa 27999135  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #61
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 248 - 290
Target Start/End: Original strand, 35152434 - 35152476
Alignment:
Q  248 ttaatcatttaagatttcgtccctctccccacttaatcactgc 290  Q
    |||||||||||| |||| |||||||||||||||||||||||||    
T  35152434 ttaatcatttaaaattttgtccctctccccacttaatcactgc 35152476  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #62
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 164 - 234
Target Start/End: Original strand, 52563658 - 52563728
Alignment:
Q  164 atatgcatttcattcctgcaattataggtcatttgatttttcatccatgagcttactaatcctcccatttt 234  Q
    ||||||||||||| ||||||| ||||||  |||||   |||||||| |||| |||||||||||||||||||    
T  52563658 atatgcatttcatccctgcaaatatagggtatttggaatttcatccttgaggttactaatcctcccatttt 52563728  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #63
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 157 - 237
Target Start/End: Complemental strand, 28534896 - 28534817
Alignment:
Q  157 ggcttacatatgcatttcattcctgcaattataggtcatttgatttttcatccatgagcttactaatcctcccattttacc 237  Q
    |||||| ||||||||||| ||| || || |||||| |||||||  |||||||| ||| |||||||||||| ||||||||||    
T  28534896 ggcttaaatatgcatttcgttc-tgtaaatatagggcatttgaaatttcatccctgaacttactaatccttccattttacc 28534817  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #64
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 251 - 299
Target Start/End: Original strand, 48691242 - 48691290
Alignment:
Q  251 atcatttaagatttcgtccctctccccacttaatcactgccacatcact 299  Q
    ||||||||| |||| ||| |||||||||||||||||||||||| |||||    
T  48691242 atcatttaaaattttgtcactctccccacttaatcactgccacgtcact 48691290  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #65
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 178 - 257
Target Start/End: Complemental strand, 33347779 - 33347700
Alignment:
Q  178 cctgcaattataggtcatttgatttttcatccatgagcttactaatcctcccattttacccttgtaaaaattaatcattt 257  Q
    ||||||| |||||||||||||| ||||| ||| |||  ||||||||||| ||| | | |||||| ||| |||||||||||    
T  33347779 cctgcaaatataggtcatttgaattttcgtccttgaagttactaatccttccaatctgcccttgcaaatattaatcattt 33347700  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #66
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 178 - 257
Target Start/End: Original strand, 49002897 - 49002976
Alignment:
Q  178 cctgcaattataggtcatttgatttttcatccatgagcttactaatcctcccattttacccttgtaaaaattaatcattt 257  Q
    ||||||| |||||||||||||| ||||| |||||||  ||||||||||| ||| | | ||| || ||| |||||||||||    
T  49002897 cctgcaaatataggtcatttgaattttcgtccatgaagttactaatccttccaatctgcccctgcaaatattaatcattt 49002976  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #67
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 155 - 257
Target Start/End: Complemental strand, 2953850 - 2953748
Alignment:
Q  155 ttggcttacatatgcatttcattcctgcaattataggtcatttgatttttcatccatgagcttactaatcctcccattttacccttgtaaaaattaatca 254  Q
    |||||||| |||||  |||| | ||||||| |||||||||||||| ||||| ||| |||  ||||||||||| ||| | | ||| || ||| ||||||||    
T  2953850 ttggcttaaatatgtctttcgtccctgcaaatataggtcatttgaattttcgtccctgaagttactaatccttccaatctgcccctgcaaatattaatca 2953751  T
Q  255 ttt 257  Q
    |||    
T  2953750 ttt 2953748  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #68
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 248 - 301
Target Start/End: Complemental strand, 44523473 - 44523420
Alignment:
Q  248 ttaatcatttaagatttcgtccctctccccacttaatcactgccacatcactaa 301  Q
    |||||||||||| ||||| |||||| |  ||||||||||||||||| |||||||    
T  44523473 ttaatcatttaaaatttcatccctcccttcacttaatcactgccacgtcactaa 44523420  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #69
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 248 - 289
Target Start/End: Original strand, 46163121 - 46163162
Alignment:
Q  248 ttaatcatttaagatttcgtccctctccccacttaatcactg 289  Q
    |||||||||||| |||||||| ||||||||||||||| ||||    
T  46163121 ttaatcatttaaaatttcgtctctctccccacttaattactg 46163162  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #70
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 248 - 301
Target Start/End: Original strand, 48779208 - 48779261
Alignment:
Q  248 ttaatcatttaagatttcgtccctctccccacttaatcactgccacatcactaa 301  Q
    |||||||||||| ||| | | ||||||||||||||||||||||||  |||||||    
T  48779208 ttaatcatttaaaattcctttcctctccccacttaatcactgccatgtcactaa 48779261  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #71
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 200 - 293
Target Start/End: Original strand, 50062246 - 50062339
Alignment:
Q  200 tttttcatccatgagcttactaatcctcccattttacccttgtaaaaattaatcatttaagatttcgtccctctccccacttaatcactgccac 293  Q
    |||||||||| ||| |||||||||||| ||||||| | | |||||  | ||||||||| | | ||||||||||| |||   |||||||||||||    
T  50062246 tttttcatccctgaacttactaatccttccattttgctcctgtaattactaatcatttgaaagttcgtccctcttcccggataatcactgccac 50062339  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #72
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 178 - 226
Target Start/End: Complemental strand, 49003238 - 49003190
Alignment:
Q  178 cctgcaattataggtcatttgatttttcatccatgagcttactaatcct 226  Q
    ||||||| |||||||||||||| ||||| |||||||  |||||||||||    
T  49003238 cctgcaaatataggtcatttgaattttcgtccatgaagttactaatcct 49003190  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 103; Significance: 4e-51; HSPs: 50)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 103; E-Value: 4e-51
Query Start/End: Original strand, 155 - 297
Target Start/End: Complemental strand, 25624535 - 25624393
Alignment:
Q  155 ttggcttacatatgcatttcattcctgcaattataggtcatttgatttttcatccatgagcttactaatcctcccattttacccttgtaaaaattaatca 254  Q
    |||||||| ||||||||||||| |||| ||||||||||||||||||||||||||| |||||||||||||||||||||||| ||| |||||||||||||||    
T  25624535 ttggcttaaatatgcatttcatccctgtaattataggtcatttgatttttcatccctgagcttactaatcctcccatttttcccctgtaaaaattaatca 25624436  T
Q  255 tttaagatttcgtccctctccccacttaatcactgccacatca 297  Q
    ||||| ||||||||||||| |||  ||||||||||||||||||    
T  25624435 tttaaaatttcgtccctctacccggttaatcactgccacatca 25624393  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 90; E-Value: 2e-43
Query Start/End: Original strand, 156 - 293
Target Start/End: Original strand, 25623287 - 25623424
Alignment:
Q  156 tggcttacatatgcatttcattcctgcaattataggtcatttgatttttcatccatgagcttactaatcctcccattttacccttgtaaaaattaatcat 255  Q
    ||||||| ||||||||||||| |||  ||||||||| ||||||||||||||||| |||||||||||||||||||||||| ||| ||||||||||||||||    
T  25623287 tggcttaaatatgcatttcatccctataattataggccatttgatttttcatccctgagcttactaatcctcccattttgcccctgtaaaaattaatcat 25623386  T
Q  256 ttaagatttcgtccctctccccacttaatcactgccac 293  Q
    |||| ||||||||||||| |||  ||||||||||||||    
T  25623387 ttaaaatttcgtccctctacccggttaatcactgccac 25623424  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 69; E-Value: 8e-31
Query Start/End: Original strand, 157 - 257
Target Start/End: Original strand, 24387351 - 24387451
Alignment:
Q  157 ggcttacatatgcatttcattcctgcaattataggtcatttgatttttcatccatgagcttactaatcctcccattttacccttgtaaaaattaatcatt 256  Q
    |||||| ||||||||||||| |||||||||||||| ||||| ||||||||||| ||||||||||||||||||||||||  || |||||||||||||||||    
T  24387351 ggcttaaatatgcatttcatccctgcaattataggccatttaatttttcatccctgagcttactaatcctcccattttgtccatgtaaaaattaatcatt 24387450  T
Q  257 t 257  Q
    |    
T  24387451 t 24387451  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 66; E-Value: 5e-29
Query Start/End: Original strand, 157 - 258
Target Start/End: Complemental strand, 24388356 - 24388255
Alignment:
Q  157 ggcttacatatgcatttcattcctgcaattataggtcatttgatttttcatccatgagcttactaatcctcccattttacccttgtaaaaattaatcatt 256  Q
    |||||| ||||||||||||| |||||||||||| |  |||||||||||||||| |||||||||||||||| ||||||| || ||||||||||||||||||    
T  24388356 ggcttaaatatgcatttcatccctgcaattataagcaatttgatttttcatccctgagcttactaatccttccattttgccattgtaaaaattaatcatt 24388257  T
Q  257 ta 258  Q
    ||    
T  24388256 ta 24388255  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 157 - 234
Target Start/End: Original strand, 20101770 - 20101847
Alignment:
Q  157 ggcttacatatgcatttcattcctgcaattataggtcatttgatttttcatccatgagcttactaatcctcccatttt 234  Q
    |||||| |||||| |||||| |||| ||||||||| ||||||||||||||||| ||||||||||||||||||||||||    
T  20101770 ggcttaaatatgcttttcatccctgtaattataggccatttgatttttcatccctgagcttactaatcctcccatttt 20101847  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 157 - 293
Target Start/End: Original strand, 29957817 - 29957953
Alignment:
Q  157 ggcttacatatgcatttcattcctgcaattataggtcatttgatttttcatccatgagcttactaatcctcccattttacccttgtaaaaattaatcatt 256  Q
    |||||| |||||| |||||| |||| ||||||||| | ||||||||||||||| ||| |||||||||||| ||||||| ||| |||||  | ||||||||    
T  29957817 ggcttaaatatgcttttcatccctgtaattataggccgtttgatttttcatccctgaacttactaatccttccattttgcccctgtaattactaatcatt 29957916  T
Q  257 taagatttcgtccctctccccacttaatcactgccac 293  Q
    | | | ||||||||||| |||  ||||||| ||||||    
T  29957917 tgaaagttcgtccctcttcccggttaatcattgccac 29957953  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 155 - 293
Target Start/End: Complemental strand, 20983363 - 20983225
Alignment:
Q  155 ttggcttacatatgcatttcattcctgcaattataggtcatttgatttttcatccatgagcttactaatcctcccattttacccttgtaaaaattaatca 254  Q
    |||||||| |||||| |||||| |||| ||||||||  | ||||||||||||||| ||| |||||||||||| ||||||| ||| |||||  | ||||||    
T  20983363 ttggcttaaatatgcttttcatccctgtaattatagaccgtttgatttttcatccctgaacttactaatccttccattttgcccctgtaattactaatca 20983264  T
Q  255 tttaagatttcgtccctctccccacttaatcactgccac 293  Q
    ||| | | ||||||||||| |||   |||||||||||||    
T  20983263 tttgaaagttcgtccctcttcccggataatcactgccac 20983225  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 248 - 301
Target Start/End: Original strand, 15848179 - 15848232
Alignment:
Q  248 ttaatcatttaagatttcgtccctctccccacttaatcactgccacatcactaa 301  Q
    |||||||||||| ||||||||||||||||||||||||||||||||| |||||||    
T  15848179 ttaatcatttaaaatttcgtccctctccccacttaatcactgccacgtcactaa 15848232  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 157 - 234
Target Start/End: Complemental strand, 20103244 - 20103167
Alignment:
Q  157 ggcttacatatgcatttcattcctgcaattataggtcatttgatttttcatccatgagcttactaatcctcccatttt 234  Q
    |||||| |||||| ||| || |||| ||||||||| |||| |||||||||||| ||||||||||||||||||||||||    
T  20103244 ggcttaaatatgctttttatccctgtaattataggccattagatttttcatccctgagcttactaatcctcccatttt 20103167  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 248 - 301
Target Start/End: Complemental strand, 37895684 - 37895631
Alignment:
Q  248 ttaatcatttaagatttcgtccctctccccacttaatcactgccacatcactaa 301  Q
    |||||||||||| ||||||||||||||||||||||||||||||||| |||||||    
T  37895684 ttaatcatttaaaatttcgtccctctccccacttaatcactgccacgtcactaa 37895631  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 157 - 257
Target Start/End: Original strand, 20982524 - 20982624
Alignment:
Q  157 ggcttacatatgcatttcattcctgcaattataggtcatttgatttttcatccatgagcttactaatcctcccattttacccttgtaaaaattaatcatt 256  Q
    |||||| |||||| |||||| |||| ||||||||| | ||||||||||||||| ||| |||||||||||| ||||||| ||| |||||  | ||||||||    
T  20982524 ggcttaaatatgcttttcatccctgtaattataggccgtttgatttttcatccctgaacttactaatccttccattttgcccctgtaattactaatcatt 20982623  T
Q  257 t 257  Q
    |    
T  20982624 t 20982624  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 155 - 293
Target Start/End: Complemental strand, 29958649 - 29958511
Alignment:
Q  155 ttggcttacatatgcatttcattcctgcaattataggtcatttgatttttcatccatgagcttactaatcctcccattttacccttgtaaaaattaatca 254  Q
    |||||||| |||||  |||||| |||| |||||||||   ||||||||||||||| ||| |||||||||||| ||||||| ||| | |||  | ||||||    
T  29958649 ttggcttaaatatgtttttcatccctgtaattataggctgtttgatttttcatccctgaacttactaatccttccattttgcccctataattactaatca 29958550  T
Q  255 tttaagatttcgtccctctccccacttaatcactgccac 293  Q
    ||| | | |||||| |||| |||  ||||||||||||||    
T  29958549 tttgaaagttcgtctctcttcccggttaatcactgccac 29958511  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 248 - 293
Target Start/End: Original strand, 6657969 - 6658014
Alignment:
Q  248 ttaatcatttaagatttcgtccctctccccacttaatcactgccac 293  Q
    |||||||||||| |||||||||||||||||||||||||||||||||    
T  6657969 ttaatcatttaaaatttcgtccctctccccacttaatcactgccac 6658014  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 248 - 293
Target Start/End: Complemental strand, 14900789 - 14900744
Alignment:
Q  248 ttaatcatttaagatttcgtccctctccccacttaatcactgccac 293  Q
    |||||||||||| |||||||||||||||||||||||||||||||||    
T  14900789 ttaatcatttaaaatttcgtccctctccccacttaatcactgccac 14900744  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 248 - 293
Target Start/End: Original strand, 16099146 - 16099191
Alignment:
Q  248 ttaatcatttaagatttcgtccctctccccacttaatcactgccac 293  Q
    |||||||||||| |||||||||||||||||||||||||||||||||    
T  16099146 ttaatcatttaaaatttcgtccctctccccacttaatcactgccac 16099191  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 164 - 257
Target Start/End: Complemental strand, 19620886 - 19620793
Alignment:
Q  164 atatgcatttcattcctgcaattataggtcatttgatttttcatccatgagcttactaatcctcccattttacccttgtaaaaattaatcattt 257  Q
    ||||||||||| | ||| ||| ||||||||||||||  |||||||| ||| |||||||||||| ||||||| ||| || ||| |||||||||||    
T  19620886 atatgcatttcgtccctacaaatataggtcatttgaaatttcatccctgaacttactaatccttccattttgcccctgcaaatattaatcattt 19620793  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 248 - 293
Target Start/End: Original strand, 33739794 - 33739839
Alignment:
Q  248 ttaatcatttaagatttcgtccctctccccacttaatcactgccac 293  Q
    |||||||||||| |||||||||||||||||||||||||||||||||    
T  33739794 ttaatcatttaaaatttcgtccctctccccacttaatcactgccac 33739839  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 248 - 301
Target Start/End: Original strand, 36382252 - 36382305
Alignment:
Q  248 ttaatcatttaagatttcgtccctctccccacttaatcactgccacatcactaa 301  Q
    |||||||||||| ||||| ||||||||||||||||||||||||||| |||||||    
T  36382252 ttaatcatttaaaatttcatccctctccccacttaatcactgccacgtcactaa 36382305  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 248 - 301
Target Start/End: Original strand, 39423606 - 39423659
Alignment:
Q  248 ttaatcatttaagatttcgtccctctccccacttaatcactgccacatcactaa 301  Q
    |||||||||||| ||||||||||||||||||||||||||||||||  |||||||    
T  39423606 ttaatcatttaaaatttcgtccctctccccacttaatcactgccatgtcactaa 39423659  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 248 - 293
Target Start/End: Original strand, 39498401 - 39498446
Alignment:
Q  248 ttaatcatttaagatttcgtccctctccccacttaatcactgccac 293  Q
    |||||||||||| |||||||||||||||||||||||||||||||||    
T  39498401 ttaatcatttaaaatttcgtccctctccccacttaatcactgccac 39498446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 248 - 301
Target Start/End: Complemental strand, 44714098 - 44714045
Alignment:
Q  248 ttaatcatttaagatttcgtccctctccccacttaatcactgccacatcactaa 301  Q
    |||||||||||| ||||||||||||||||||||||||||||||||  |||||||    
T  44714098 ttaatcatttaaaatttcgtccctctccccacttaatcactgccatgtcactaa 44714045  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 248 - 292
Target Start/End: Complemental strand, 11163360 - 11163316
Alignment:
Q  248 ttaatcatttaagatttcgtccctctccccacttaatcactgcca 292  Q
    |||||||||||| ||||||||||||||||||||||||||||||||    
T  11163360 ttaatcatttaaaatttcgtccctctccccacttaatcactgcca 11163316  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 243 - 301
Target Start/End: Original strand, 11689627 - 11689685
Alignment:
Q  243 aaaaattaatcatttaagatttcgtccctctccccacttaatcactgccacatcactaa 301  Q
    |||| ||||||| |||| ||||||||| ||||||||||||||||||||||| |||||||    
T  11689627 aaaatttaatcacttaaaatttcgtccatctccccacttaatcactgccacgtcactaa 11689685  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 248 - 301
Target Start/End: Original strand, 2318249 - 2318302
Alignment:
Q  248 ttaatcatttaagatttcgtccctctccccacttaatcactgccacatcactaa 301  Q
    |||||||||||| |||||||||||||||||||||||| | |||||| |||||||    
T  2318249 ttaatcatttaaaatttcgtccctctccccacttaattaatgccacgtcactaa 2318302  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 248 - 301
Target Start/End: Original strand, 10712814 - 10712867
Alignment:
Q  248 ttaatcatttaagatttcgtccctctccccacttaatcactgccacatcactaa 301  Q
    |||||||||||| ||||| |||||||||||||||||||||| |||| |||||||    
T  10712814 ttaatcatttaaaatttcatccctctccccacttaatcactaccacgtcactaa 10712867  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 248 - 293
Target Start/End: Complemental strand, 13995979 - 13995934
Alignment:
Q  248 ttaatcatttaagatttcgtccctctccccacttaatcactgccac 293  Q
    |||||| ||||| |||||||||||||||||||||||||||||||||    
T  13995979 ttaatcgtttaaaatttcgtccctctccccacttaatcactgccac 13995934  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 248 - 293
Target Start/End: Complemental strand, 33062356 - 33062311
Alignment:
Q  248 ttaatcatttaagatttcgtccctctccccacttaatcactgccac 293  Q
    |||||||||||  |||||||||||||||||||||||||||||||||    
T  33062356 ttaatcatttataatttcgtccctctccccacttaatcactgccac 33062311  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 248 - 301
Target Start/End: Original strand, 34447904 - 34447956
Alignment:
Q  248 ttaatcatttaagatttcgtccctctccccacttaatcactgccacatcactaa 301  Q
    ||||| |||||| |||||||| ||||||||||||||||||||||||||||||||    
T  34447904 ttaataatttaa-atttcgtctctctccccacttaatcactgccacatcactaa 34447956  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 248 - 301
Target Start/End: Original strand, 36479809 - 36479862
Alignment:
Q  248 ttaatcatttaagatttcgtccctctccccacttaatcactgccacatcactaa 301  Q
    |||||||||||| ||||||||| ||||||||||||||||||||||  |||||||    
T  36479809 ttaatcatttaaaatttcgtccatctccccacttaatcactgccatgtcactaa 36479862  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 248 - 301
Target Start/End: Original strand, 36755184 - 36755237
Alignment:
Q  248 ttaatcatttaagatttcgtccctctccccacttaatcactgccacatcactaa 301  Q
    |||||||||||| |||||||| |||||||||||||||||||| ||| |||||||    
T  36755184 ttaatcatttaaaatttcgtctctctccccacttaatcactgtcacgtcactaa 36755237  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 248 - 293
Target Start/End: Complemental strand, 41248865 - 41248820
Alignment:
Q  248 ttaatcatttaagatttcgtccctctccccacttaatcactgccac 293  Q
    |||||| ||||| |||||||||||||||||||||||||||||||||    
T  41248865 ttaatcgtttaaaatttcgtccctctccccacttaatcactgccac 41248820  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 243 - 294
Target Start/End: Original strand, 17266484 - 17266535
Alignment:
Q  243 aaaaattaatcatttaagatttcgtccctctccccacttaatcactgccaca 294  Q
    |||| |||||||||||| |||| |||||||||||||||||||||||| ||||    
T  17266484 aaaatttaatcatttaaaatttggtccctctccccacttaatcactgtcaca 17266535  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 164 - 230
Target Start/End: Complemental strand, 7983903 - 7983837
Alignment:
Q  164 atatgcatttcattcctgcaattataggtcatttgatttttcatccatgagcttactaatcctccca 230  Q
    |||||||||||||  | |||| ||||||||||||||  ||||||| |||| ||||||||||||||||    
T  7983903 atatgcatttcatctcagcaaatataggtcatttgaaatttcatctatgaacttactaatcctccca 7983837  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 243 - 301
Target Start/End: Original strand, 10840562 - 10840620
Alignment:
Q  243 aaaaattaatcatttaagatttcgtccctctccccacttaatcactgccacatcactaa 301  Q
    |||| ||||||||||||  |||||||||||| ||||||||||||||| ||| |||||||    
T  10840562 aaaatttaatcatttaaactttcgtccctcttcccacttaatcactgtcacgtcactaa 10840620  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 243 - 301
Target Start/End: Complemental strand, 11721432 - 11721374
Alignment:
Q  243 aaaaattaatcatttaagatttcgtccctctccccacttaatcactgccacatcactaa 301  Q
    |||| ||||||| |||| |||||||| |||||||||||||||||||| ||| |||||||    
T  11721432 aaaatttaatcacttaaaatttcgtctctctccccacttaatcactgtcacgtcactaa 11721374  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 164 - 234
Target Start/End: Complemental strand, 33882965 - 33882895
Alignment:
Q  164 atatgcatttcattcctgcaattataggtcatttgatttttcatccatgagcttactaatcctcccatttt 234  Q
    ||||||||||||| ||||||| |||| | |||||||  ||||||  ||||| |||||||||||||||||||    
T  33882965 atatgcatttcatccctgcaaatataaggcatttgaaatttcatatatgaggttactaatcctcccatttt 33882895  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 164 - 230
Target Start/End: Original strand, 43236511 - 43236577
Alignment:
Q  164 atatgcatttcattcctgcaattataggtcatttgatttttcatccatgagcttactaatcctccca 230  Q
    |||||||||| || ||||||| |||||| |||||||  |||||||| ||| ||||||||||||||||    
T  43236511 atatgcattttatccctgcaaatataggccatttgaaatttcatccctgaacttactaatcctccca 43236577  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 248 - 289
Target Start/End: Complemental strand, 1696046 - 1696005
Alignment:
Q  248 ttaatcatttaagatttcgtccctctccccacttaatcactg 289  Q
    |||||| ||||| |||||||||||||||||||||||||||||    
T  1696046 ttaatcgtttaaaatttcgtccctctccccacttaatcactg 1696005  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 180 - 257
Target Start/End: Original strand, 28599450 - 28599527
Alignment:
Q  180 tgcaattataggtcatttgatttttcatccatgagcttactaatcctcccattttacccttgtaaaaattaatcattt 257  Q
    ||||| ||||| |||||||| ||||| |||||||  ||||||||||| ||||||| || ||| ||| |||||||||||    
T  28599450 tgcaaatatagatcatttgaattttcgtccatgaagttactaatccttccattttgccattgcaaatattaatcattt 28599527  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 233 - 301
Target Start/End: Complemental strand, 3653432 - 3653364
Alignment:
Q  233 ttacccttgtaaaaattaatcatttaagatttcgtccctctccccacttaatcactgccacatcactaa 301  Q
    ||||||||| |||  |||||||||||| ||||||||||||| || | ||||||||| |||| |||||||    
T  3653432 ttacccttgcaaagtttaatcatttaaaatttcgtccctcttccaagttaatcactaccacgtcactaa 3653364  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 248 - 292
Target Start/End: Original strand, 45556203 - 45556247
Alignment:
Q  248 ttaatcatttaagatttcgtccctctccccacttaatcactgcca 292  Q
    |||||||||||| |||| ||||||||||| |||||||||||||||    
T  45556203 ttaatcatttaaaattttgtccctctccctacttaatcactgcca 45556247  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #42
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 250 - 293
Target Start/End: Original strand, 6846877 - 6846920
Alignment:
Q  250 aatcatttaagatttcgtccctctccccacttaatcactgccac 293  Q
    |||||||||| ||||||||||||| |||||||||| ||||||||    
T  6846877 aatcatttaaaatttcgtccctcttcccacttaattactgccac 6846920  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #43
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 248 - 289
Target Start/End: Original strand, 6573137 - 6573178
Alignment:
Q  248 ttaatcatttaagatttcgtccctctccccacttaatcactg 289  Q
    |||||||||||| | ||||||||||||||| |||||||||||    
T  6573137 ttaatcatttaaaaattcgtccctctccccccttaatcactg 6573178  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #44
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 248 - 301
Target Start/End: Complemental strand, 6577614 - 6577561
Alignment:
Q  248 ttaatcatttaagatttcgtccctctccccacttaatcactgccacatcactaa 301  Q
    ||||| |||||| | | ||||||||| ||||||||||||||||||| |||||||    
T  6577614 ttaattatttaaaaatccgtccctcttcccacttaatcactgccacgtcactaa 6577561  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #45
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 180 - 257
Target Start/End: Complemental strand, 9694103 - 9694026
Alignment:
Q  180 tgcaattataggtcatttgatttttcatccatgagcttactaatcctcccattttacccttgtaaaaattaatcattt 257  Q
    ||||| |||||||||||||| ||||| ||| |||  ||||||||||| |||||||  | ||| ||| |||||||||||    
T  9694103 tgcaaatataggtcatttgaattttcgtccctgaagttactaatccttccattttgtcattgcaaatattaatcattt 9694026  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #46
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 248 - 301
Target Start/End: Complemental strand, 22051330 - 22051278
Alignment:
Q  248 ttaatcatttaagatttcgtccctctccccacttaatcactgccacatcactaa 301  Q
    |||||||||||| |||||||| |||| ||||| |||||||||||| ||||||||    
T  22051330 ttaatcatttaaaatttcgtctctct-cccacctaatcactgccatatcactaa 22051278  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #47
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 248 - 293
Target Start/End: Original strand, 25892485 - 25892530
Alignment:
Q  248 ttaatcatttaagatttcgtccctctccccacttaatcactgccac 293  Q
    |||||||||||| | |||||||||||||||||||||| ||| ||||    
T  25892485 ttaatcatttaaaaattcgtccctctccccacttaattactaccac 25892530  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #48
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 265 - 297
Target Start/End: Original strand, 3122664 - 3122696
Alignment:
Q  265 cgtccctctccccacttaatcactgccacatca 297  Q
    ||||||| |||||||||||||||||||||||||    
T  3122664 cgtccctatccccacttaatcactgccacatca 3122696  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #49
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 178 - 230
Target Start/End: Original strand, 7981068 - 7981120
Alignment:
Q  178 cctgcaattataggtcatttgatttttcatccatgagcttactaatcctccca 230  Q
    ||||||| ||||||||||||||  ||||||||  || ||||||||||||||||    
T  7981068 cctgcaactataggtcatttgaaatttcatccccgaacttactaatcctccca 7981120  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #50
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 157 - 257
Target Start/End: Original strand, 43681856 - 43681956
Alignment:
Q  157 ggcttacatatgcatttcattcctgcaattataggtcatttgatttttcatccatgagcttactaatcctcccattttacccttgtaaaaattaatcatt 256  Q
    |||||| |||||  |||| | ||||||| |||| ||||||||| ||||| ||||| |  ||||||||| | ||||||| || ||| ||| ||||||||||    
T  43681856 ggcttaaatatgtctttcgtccctgcaaatatatgtcatttgaattttcgtccataaagttactaatcattccattttgccattgcaaatattaatcatt 43681955  T
Q  257 t 257  Q
    |    
T  43681956 t 43681956  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 89; Significance: 9e-43; HSPs: 74)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 89; E-Value: 9e-43
Query Start/End: Original strand, 157 - 293
Target Start/End: Complemental strand, 22870562 - 22870426
Alignment:
Q  157 ggcttacatatgcatttcattcctgcaattataggtcatttgatttttcatccatgagcttactaatcctcccattttacccttgtaaaaattaatcatt 256  Q
    |||||| ||||||||||||| |||| ||||||||| ||||||||||||||||| |||||||||||||||||||||||| ||| |||||||||||||||||    
T  22870562 ggcttaaatatgcatttcatccctgtaattataggccatttgatttttcatccctgagcttactaatcctcccattttgcccctgtaaaaattaatcatt 22870463  T
Q  257 taagatttcgtccctctccccacttaatcactgccac 293  Q
    ||| |||||||| |||| |||  ||||||||||||||    
T  22870462 taaaatttcgtctctcttcccgattaatcactgccac 22870426  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 164 - 293
Target Start/End: Original strand, 22869612 - 22869741
Alignment:
Q  164 atatgcatttcattcctgcaattataggtcatttgatttttcatccatgagcttactaatcctcccattttacccttgtaaaaattaatcatttaagatt 263  Q
    ||||||||||||| | || ||||||||| ||||||||||||||||| |||||||||||||||||||||||| ||| |||||||||||| ||||||| |||    
T  22869612 atatgcatttcatccttgtaattataggccatttgatttttcatccctgagcttactaatcctcccattttgcccctgtaaaaattaaccatttaaaatt 22869711  T
Q  264 tcgtccctctccccacttaatcactgccac 293  Q
    |||||||||| |||  ||||||||||||||    
T  22869712 tcgtccctcttcccggttaatcactgccac 22869741  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 157 - 293
Target Start/End: Original strand, 20856932 - 20857068
Alignment:
Q  157 ggcttacatatgcatttcattcctgcaattataggtcatttgatttttcatccatgagcttactaatcctcccattttacccttgtaaaaattaatcatt 256  Q
    |||||| |||||| |||||| |||| ||||||||| | ||||||||||||||| |||||||||||||||||||||||| ||| ||||||| |||||||||    
T  20856932 ggcttaaatatgcttttcatccctgtaattataggccgtttgatttttcatccctgagcttactaatcctcccattttgcccctgtaaaagttaatcatt 20857031  T
Q  257 taagatttcgtccctctccccacttaatcactgccac 293  Q
    | | ||||||||||||| |||  ||||||||||||||    
T  20857032 tgaaatttcgtccctcttcccggttaatcactgccac 20857068  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 74; E-Value: 8e-34
Query Start/End: Original strand, 164 - 297
Target Start/End: Original strand, 36476772 - 36476905
Alignment:
Q  164 atatgcatttcattcctgcaattataggtcatttgatttttcatccatgagcttactaatcctcccattttacccttgtaaaaattaatcatttaagatt 263  Q
    |||||| |||||| |||||||||||||| | ||||||||||||||| |||||||||||||||||||||||| |||||||||  | ||||||||| | | |    
T  36476772 atatgcttttcatccctgcaattataggccgtttgatttttcatccctgagcttactaatcctcccattttgcccttgtaattactaatcatttgaaagt 36476871  T
Q  264 tcgtccctctccccacttaatcactgccacatca 297  Q
    |||||||||| ||||  |||||||||||||||||    
T  36476872 tcgtccctcttcccagataatcactgccacatca 36476905  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 164 - 293
Target Start/End: Complemental strand, 36477469 - 36477340
Alignment:
Q  164 atatgcatttcattcctgcaattataggtcatttgatttttcatccatgagcttactaatcctcccattttacccttgtaaaaattaatcatttaagatt 263  Q
    |||||| |||||| |||||||||||||| | |||||||||||||||||||||||||||||||||||||||| ||| |||||  | ||||||||| | | |    
T  36477469 atatgcttttcatccctgcaattataggccgtttgatttttcatccatgagcttactaatcctcccattttgcccctgtaattactaatcatttgaaagt 36477370  T
Q  264 tcgtccctctccccacttaatcactgccac 293  Q
    ||||||||||||||   |||||||||||||    
T  36477369 tcgtccctctccccggataatcactgccac 36477340  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 157 - 257
Target Start/End: Complemental strand, 14744830 - 14744730
Alignment:
Q  157 ggcttacatatgcatttcattcctgcaattataggtcatttgatttttcatccatgagcttactaatcctcccattttacccttgtaaaaattaatcatt 256  Q
    |||||| ||||||||||||| |||||||||||| ||||||||||||||||||| ||| |||||||||||||||||||| ||| || ||| ||||||||||    
T  14744830 ggcttaaatatgcatttcatccctgcaattatatgtcatttgatttttcatccctgaacttactaatcctcccattttgcccctgcaaatattaatcatt 14744731  T
Q  257 t 257  Q
    |    
T  14744730 t 14744730  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 157 - 293
Target Start/End: Complemental strand, 20857647 - 20857511
Alignment:
Q  157 ggcttacatatgcatttcattcctgcaattataggtcatttgatttttcatccatgagcttactaatcctcccattttacccttgtaaaaattaatcatt 256  Q
    |||||| |||||| |||||| | || ||||||||| | ||||||||||||| | | |||||||||||||||||||||| ||| ||||||| |||||||||    
T  20857647 ggcttaaatatgcttttcatccatgtaattataggccgtttgatttttcattcctaagcttactaatcctcccattttgcccctgtaaaagttaatcatt 20857548  T
Q  257 taagatttcgtccctctccccacttaatcactgccac 293  Q
    | | ||||||||||||| |||  ||||||||||||||    
T  20857547 tgaaatttcgtccctcttcccggttaatcactgccac 20857511  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 157 - 238
Target Start/End: Original strand, 31107931 - 31108012
Alignment:
Q  157 ggcttacatatgcatttcattcctgcaattataggtcatttgatttttcatccatgagcttactaatcctcccattttaccc 238  Q
    |||||| ||||||||||||| |||||||||||||| ||||||||||||||||| ||| ||||||||||||||||||||||||    
T  31107931 ggcttaaatatgcatttcatccctgcaattataggccatttgatttttcatccctgaacttactaatcctcccattttaccc 31108012  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 157 - 234
Target Start/End: Original strand, 8654107 - 8654184
Alignment:
Q  157 ggcttacatatgcatttcattcctgcaattataggtcatttgatttttcatccatgagcttactaatcctcccatttt 234  Q
    |||||| |||||  |||||| |||| ||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  8654107 ggcttaaatatgtttttcatccctgtaattataggtcatttgatttttcatccatgagcttactaatcctcccatttt 8654184  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 157 - 293
Target Start/End: Complemental strand, 20072969 - 20072833
Alignment:
Q  157 ggcttacatatgcatttcattcctgcaattataggtcatttgatttttcatccatgagcttactaatcctcccattttacccttgtaaaaattaatcatt 256  Q
    |||||| |||||| |||||| |||| ||||||||||| ||||||||||||||| ||| |||||||||||| ||||||| ||| |||||  | ||||||||    
T  20072969 ggcttaaatatgcttttcatccctgtaattataggtcgtttgatttttcatccctgaacttactaatccttccattttgcccctgtaattactaatcatt 20072870  T
Q  257 taagatttcgtccctctccccacttaatcactgccac 293  Q
    | | | ||||||||||| |||   |||||||||||||    
T  20072869 tgaaagttcgtccctcttcccggataatcactgccac 20072833  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 157 - 257
Target Start/End: Complemental strand, 21979071 - 21978971
Alignment:
Q  157 ggcttacatatgcatttcattcctgcaattataggtcatttgatttttcatccatgagcttactaatcctcccattttacccttgtaaaaattaatcatt 256  Q
    |||||| ||||||||||||| |||||||||||| | |||||||||||||||||  || |||||||||||||| |||||| || ||||||||||||| |||    
T  21979071 ggcttaaatatgcatttcatccctgcaattataagccatttgatttttcatcctcgaacttactaatcctcctattttatccctgtaaaaattaataatt 21978972  T
Q  257 t 257  Q
    |    
T  21978971 t 21978971  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 155 - 293
Target Start/End: Original strand, 20072119 - 20072257
Alignment:
Q  155 ttggcttacatatgcatttcattcctgcaattataggtcatttgatttttcatccatgagcttactaatcctcccattttacccttgtaaaaattaatca 254  Q
    |||||||| |||||| ||||||  ||| ||||||||| | ||||||||||||||| ||| ||||||||||||  |||||| ||| |||||  | ||||||    
T  20072119 ttggcttaaatatgcttttcatctctgtaattataggccgtttgatttttcatccctgaacttactaatcctttcattttgcccctgtaattactaatca 20072218  T
Q  255 tttaagatttcgtccctctccccacttaatcactgccac 293  Q
    ||| | | ||||||||||| ||||  |||||||||||||    
T  20072219 tttgaaagttcgtccctcttcccagataatcactgccac 20072257  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 155 - 293
Target Start/End: Complemental strand, 39181898 - 39181760
Alignment:
Q  155 ttggcttacatatgcatttcattcctgcaattataggtcatttgatttttcatccatgagcttactaatcctcccattttacccttgtaaaaattaatca 254  Q
    |||||||| |||||  ||| || |||| ||||||||||| ||||||||||||||| ||| |||||||||||| ||||||| ||| |||||  | ||||||    
T  39181898 ttggcttaaatatgtttttaatccctgtaattataggtcgtttgatttttcatccctgaacttactaatccttccattttgcccctgtaattactaatca 39181799  T
Q  255 tttaagatttcgtccctctccccacttaatcactgccac 293  Q
    ||| | | ||||||||||| |||   |||||||||||||    
T  39181798 tttgaaagttcgtccctcttcccggataatcactgccac 39181760  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 248 - 301
Target Start/End: Original strand, 35512239 - 35512292
Alignment:
Q  248 ttaatcatttaagatttcgtccctctccccacttaatcactgccacatcactaa 301  Q
    |||||||||||| |||||||||||||||||||||||||||||||||||||||||    
T  35512239 ttaatcatttaaaatttcgtccctctccccacttaatcactgccacatcactaa 35512292  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 164 - 310
Target Start/End: Original strand, 16532900 - 16533046
Alignment:
Q  164 atatgcatttcattcctgcaattataggtcatttgatttttcatccatgagcttactaatcctcccattttacccttgtaaaaattaatcatttaagatt 263  Q
    |||||| |||||| |||| ||||||||| | ||||||||||||||| ||| |||| ||||||| ||||||| ||| |||||  | ||||||||| | | |    
T  16532900 atatgcttttcatccctgtaattataggccgtttgatttttcatccctgaacttattaatccttccattttgcccctgtaattactaatcatttgaaagt 16532999  T
Q  264 tcgtccctctccccacttaatcactgccacatcactaagtcagcaaa 310  Q
    |||||||||| |||   ||||||||||||| ||| ||| | ||||||    
T  16533000 tcgtccctcttcccggataatcactgccacgtcattaaattagcaaa 16533046  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 248 - 301
Target Start/End: Complemental strand, 5024355 - 5024302
Alignment:
Q  248 ttaatcatttaagatttcgtccctctccccacttaatcactgccacatcactaa 301  Q
    |||||||||||| ||||||| |||||||||||||||||||||||||||||||||    
T  5024355 ttaatcatttaaaatttcgttcctctccccacttaatcactgccacatcactaa 5024302  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 164 - 257
Target Start/End: Complemental strand, 21978110 - 21978017
Alignment:
Q  164 atatgcatttcattcctgcaattataggtcatttgatttttcatccatgagcttactaatcctcccattttacccttgtaaaaattaatcattt 257  Q
    |||||| |||||| |||| |||||| || ||||||||||||||||| |||||||||||||||||||| ||| ||| |||||  | |||||||||    
T  21978110 atatgcttttcatccctgtaattatgggccatttgatttttcatccctgagcttactaatcctcccactttgcccctgtaattactaatcattt 21978017  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 164 - 257
Target Start/End: Complemental strand, 31108430 - 31108338
Alignment:
Q  164 atatgcatttcattcctgcaattataggtcatttgatttttcatccatgagcttactaatcctcccattttacccttgtaaaaattaatcattt 257  Q
    ||||| ||||||| ||||||| |||||  ||||||||||||||||||||| |||||||||| | |||||||| || |||||| |||||||||||    
T  31108430 atatgtatttcatccctgcaaatataga-catttgatttttcatccatgaacttactaatctttccattttatccctgtaaatattaatcattt 31108338  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 248 - 301
Target Start/End: Original strand, 32242333 - 32242386
Alignment:
Q  248 ttaatcatttaagatttcgtccctctccccacttaatcactgccacatcactaa 301  Q
    |||||||||||| ||||||||||||||||||||||||||||||||| |||||||    
T  32242333 ttaatcatttaaaatttcgtccctctccccacttaatcactgccacgtcactaa 32242386  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 248 - 301
Target Start/End: Original strand, 38442159 - 38442212
Alignment:
Q  248 ttaatcatttaagatttcgtccctctccccacttaatcactgccacatcactaa 301  Q
    |||||||||||| ||||||||||||||||||||||||||||||||||| |||||    
T  38442159 ttaatcatttaaaatttcgtccctctccccacttaatcactgccacataactaa 38442212  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 157 - 273
Target Start/End: Original strand, 39181057 - 39181173
Alignment:
Q  157 ggcttacatatgcatttcattcctgcaattataggtcatttgatttttcatccatgagcttactaatcctcccattttacccttgtaaaaattaatcatt 256  Q
    |||||| |||||| |||||| |||| ||||||| | | ||||||||||||||| ||| |||||||||||| ||||||| ||| |||||  | ||||||||    
T  39181057 ggcttaaatatgcttttcatccctgtaattataagccgtttgatttttcatccctgaacttactaatccttccattttgcccctgtaattactaatcatt 39181156  T
Q  257 taagatttcgtccctct 273  Q
    | | | |||||||||||    
T  39181157 tgaaagttcgtccctct 39181173  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 156 - 310
Target Start/End: Complemental strand, 16533726 - 16533572
Alignment:
Q  156 tggcttacatatgcatttcattcctgcaattataggtcatttgatttttcatccatgagcttactaatcctcccattttacccttgtaaaaattaatcat 255  Q
    ||||||| |||||| |||||| |||  ||||||||| | ||||||||||||||  ||| |||| ||||||| ||||||| ||| |||||  | |||||||    
T  16533726 tggcttaaatatgcttttcatccctataattataggccgtttgatttttcatctctgaacttattaatccttccattttgcccctgtaattactaatcat 16533627  T
Q  256 ttaagatttcgtccctctccccacttaatcactgccacatcactaagtcagcaaa 310  Q
    || | | ||||||||||| |||   ||||||||||||| ||| ||| | ||||||    
T  16533626 ttgaaagttcgtccctcttcccggataatcactgccacgtcattaaattagcaaa 16533572  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 248 - 294
Target Start/End: Complemental strand, 38475336 - 38475290
Alignment:
Q  248 ttaatcatttaagatttcgtccctctccccacttaatcactgccaca 294  Q
    |||||||||||| ||||||||||||||||||||||||||||||||||    
T  38475336 ttaatcatttaaaatttcgtccctctccccacttaatcactgccaca 38475290  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 248 - 293
Target Start/End: Complemental strand, 297320 - 297275
Alignment:
Q  248 ttaatcatttaagatttcgtccctctccccacttaatcactgccac 293  Q
    |||||||||||| |||||||||||||||||||||||||||||||||    
T  297320 ttaatcatttaaaatttcgtccctctccccacttaatcactgccac 297275  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 248 - 293
Target Start/End: Complemental strand, 3529179 - 3529134
Alignment:
Q  248 ttaatcatttaagatttcgtccctctccccacttaatcactgccac 293  Q
    |||||||||||| |||||||||||||||||||||||||||||||||    
T  3529179 ttaatcatttaaaatttcgtccctctccccacttaatcactgccac 3529134  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 248 - 301
Target Start/End: Original strand, 5993980 - 5994033
Alignment:
Q  248 ttaatcatttaagatttcgtccctctccccacttaatcactgccacatcactaa 301  Q
    |||||||||||| ||||||||||||||||||||||||||||||||  |||||||    
T  5993980 ttaatcatttaaaatttcgtccctctccccacttaatcactgccatgtcactaa 5994033  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 248 - 293
Target Start/End: Complemental strand, 6758171 - 6758126
Alignment:
Q  248 ttaatcatttaagatttcgtccctctccccacttaatcactgccac 293  Q
    |||||||||||| |||||||||||||||||||||||||||||||||    
T  6758171 ttaatcatttaaaatttcgtccctctccccacttaatcactgccac 6758126  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 243 - 300
Target Start/End: Complemental strand, 14849049 - 14848992
Alignment:
Q  243 aaaaattaatcatttaagatttcgtccctctccccacttaatcactgccacatcacta 300  Q
    |||| |||||||||||| |||| ||||||| |||||||||||||||||||||||||||    
T  14849049 aaaatttaatcatttaaaatttggtccctcaccccacttaatcactgccacatcacta 14848992  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 248 - 293
Target Start/End: Original strand, 41930607 - 41930652
Alignment:
Q  248 ttaatcatttaagatttcgtccctctccccacttaatcactgccac 293  Q
    |||||||||||| |||||||||||||||||||||||||||||||||    
T  41930607 ttaatcatttaaaatttcgtccctctccccacttaatcactgccac 41930652  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 248 - 292
Target Start/End: Complemental strand, 28269725 - 28269681
Alignment:
Q  248 ttaatcatttaagatttcgtccctctccccacttaatcactgcca 292  Q
    |||||||||||| ||||||||||||||||||||||||||||||||    
T  28269725 ttaatcatttaaaatttcgtccctctccccacttaatcactgcca 28269681  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 248 - 292
Target Start/End: Complemental strand, 28771175 - 28771131
Alignment:
Q  248 ttaatcatttaagatttcgtccctctccccacttaatcactgcca 292  Q
    |||||||||||| ||||||||||||||||||||||||||||||||    
T  28771175 ttaatcatttaaaatttcgtccctctccccacttaatcactgcca 28771131  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 248 - 292
Target Start/End: Complemental strand, 31482708 - 31482664
Alignment:
Q  248 ttaatcatttaagatttcgtccctctccccacttaatcactgcca 292  Q
    |||||||||||| ||||||||||||||||||||||||||||||||    
T  31482708 ttaatcatttaaaatttcgtccctctccccacttaatcactgcca 31482664  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 248 - 290
Target Start/End: Complemental strand, 14194760 - 14194718
Alignment:
Q  248 ttaatcatttaagatttcgtccctctccccacttaatcactgc 290  Q
    |||||||||||| ||||||||||||||||||||||||||||||    
T  14194760 ttaatcatttaaaatttcgtccctctccccacttaatcactgc 14194718  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 248 - 298
Target Start/End: Complemental strand, 24547462 - 24547412
Alignment:
Q  248 ttaatcatttaagatttcgtccctctccccacttaatcactgccacatcac 298  Q
    |||||||||||| ||||||||||||||||||||||| ||||||||| ||||    
T  24547462 ttaatcatttaaaatttcgtccctctccccacttaaccactgccacgtcac 24547412  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 248 - 293
Target Start/End: Original strand, 1506058 - 1506103
Alignment:
Q  248 ttaatcatttaagatttcgtccctctccccacttaatcactgccac 293  Q
    |||||| ||||| |||||||||||||||||||||||||||||||||    
T  1506058 ttaatcgtttaaaatttcgtccctctccccacttaatcactgccac 1506103  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 248 - 289
Target Start/End: Original strand, 8322495 - 8322536
Alignment:
Q  248 ttaatcatttaagatttcgtccctctccccacttaatcactg 289  Q
    |||||||||||| |||||||||||||||||||||||||||||    
T  8322495 ttaatcatttaaaatttcgtccctctccccacttaatcactg 8322536  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 164 - 241
Target Start/End: Complemental strand, 8673851 - 8673774
Alignment:
Q  164 atatgcatttcattcctgcaattataggtcatttgatttttcatccatgagcttactaatcctcccattttacccttg 241  Q
    ||||||||||||| ||||||| |||||| |||||||  |||||||| ||| ||| ||||| |||||||||| ||||||    
T  8673851 atatgcatttcatccctgcaaatataggccatttgaaatttcatccttgaacttgctaattctcccattttgcccttg 8673774  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 248 - 301
Target Start/End: Original strand, 11047528 - 11047581
Alignment:
Q  248 ttaatcatttaagatttcgtccctctccccacttaatcactgccacatcactaa 301  Q
    |||||||||||| |||||||| |||||||||||||||||||||||  |||||||    
T  11047528 ttaatcatttaaaatttcgtctctctccccacttaatcactgccatgtcactaa 11047581  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 248 - 301
Target Start/End: Complemental strand, 13362565 - 13362512
Alignment:
Q  248 ttaatcatttaagatttcgtccctctccccacttaatcactgccacatcactaa 301  Q
    |||||||||||| |||| ||| ||||||||||||||||||||| ||||||||||    
T  13362565 ttaatcatttaaaatttagtctctctccccacttaatcactgctacatcactaa 13362512  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 248 - 301
Target Start/End: Original strand, 13962955 - 13963008
Alignment:
Q  248 ttaatcatttaagatttcgtccctctccccacttaatcactgccacatcactaa 301  Q
    |||||||||||| ||||||||||||||| ||||||||||||| ||| |||||||    
T  13962955 ttaatcatttaaaatttcgtccctctcctcacttaatcactgtcacgtcactaa 13963008  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #41
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 248 - 301
Target Start/End: Complemental strand, 19892645 - 19892592
Alignment:
Q  248 ttaatcatttaagatttcgtccctctccccacttaatcactgccacatcactaa 301  Q
    |||||||||||| ||||||||  ||||||||||||||||||||||| |||||||    
T  19892645 ttaatcatttaaaatttcgtcattctccccacttaatcactgccacgtcactaa 19892592  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #42
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 248 - 301
Target Start/End: Original strand, 20840624 - 20840677
Alignment:
Q  248 ttaatcatttaagatttcgtccctctccccacttaatcactgccacatcactaa 301  Q
    ||||| |||||| |||| |||||||||||||||||||||||||||| |||||||    
T  20840624 ttaatgatttaaaattttgtccctctccccacttaatcactgccacgtcactaa 20840677  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #43
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 248 - 293
Target Start/End: Original strand, 27587239 - 27587284
Alignment:
Q  248 ttaatcatttaagatttcgtccctctccccacttaatcactgccac 293  Q
    |||||||||||| |||||||||||||||||| ||||||||||||||    
T  27587239 ttaatcatttaaaatttcgtccctctccccatttaatcactgccac 27587284  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #44
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 248 - 289
Target Start/End: Complemental strand, 29646699 - 29646658
Alignment:
Q  248 ttaatcatttaagatttcgtccctctccccacttaatcactg 289  Q
    |||||||||||| |||||||||||||||||||||||||||||    
T  29646699 ttaatcatttaaaatttcgtccctctccccacttaatcactg 29646658  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #45
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 248 - 289
Target Start/End: Complemental strand, 35920521 - 35920480
Alignment:
Q  248 ttaatcatttaagatttcgtccctctccccacttaatcactg 289  Q
    |||||||||||| |||||||||||||||||||||||||||||    
T  35920521 ttaatcatttaaaatttcgtccctctccccacttaatcactg 35920480  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #46
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 248 - 289
Target Start/End: Original strand, 39453391 - 39453432
Alignment:
Q  248 ttaatcatttaagatttcgtccctctccccacttaatcactg 289  Q
    |||||||||||| |||||||||||||||||||||||||||||    
T  39453391 ttaatcatttaaaatttcgtccctctccccacttaatcactg 39453432  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #47
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 248 - 292
Target Start/End: Original strand, 6150545 - 6150589
Alignment:
Q  248 ttaatcatttaagatttcgtccctctccccacttaatcactgcca 292  Q
    |||||||||||| |||||||||||||||||||||||||| |||||    
T  6150545 ttaatcatttaaaatttcgtccctctccccacttaatcattgcca 6150589  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #48
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 243 - 298
Target Start/End: Complemental strand, 15645054 - 15644999
Alignment:
Q  243 aaaaattaatcatttaagatttcgtccctctccccacttaatcactgccacatcac 298  Q
    |||| |||||||||||| |||||||||||   ||||||||||||||||||||||||    
T  15645054 aaaatttaatcatttaaaatttcgtccctacacccacttaatcactgccacatcac 15644999  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #49
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 178 - 257
Target Start/End: Original strand, 21260886 - 21260965
Alignment:
Q  178 cctgcaattataggtcatttgatttttcatccatgagcttactaatcctcccattttacccttgtaaaaattaatcattt 257  Q
    ||||||| |||||||||||||| ||||| ||| |||  ||||||||||| ||||||| || ||| ||| |||||||||||    
T  21260886 cctgcaaatataggtcatttgaattttcgtccctgaagttactaatccttccattttgccattgcaaatattaatcattt 21260965  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #50
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 171 - 234
Target Start/End: Original strand, 21972104 - 21972166
Alignment:
Q  171 tttcattcctgcaattataggtcatttgatttttcatccatgagcttactaatcctcccatttt 234  Q
    |||||| |||| |||||| || ||||||||||||||||| | ||||||||||||||||||||||    
T  21972104 tttcatccctgtaattatgggccatttgatttttcatcc-tcagcttactaatcctcccatttt 21972166  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #51
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 243 - 301
Target Start/End: Original strand, 12904840 - 12904898
Alignment:
Q  243 aaaaattaatcatttaagatttcgtccctctccccacttaatcactgccacatcactaa 301  Q
    |||| ||||| |||||| |||||||||||||||||||||||||| || ||| |||||||    
T  12904840 aaaatttaataatttaaaatttcgtccctctccccacttaatcaatgtcacgtcactaa 12904898  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #52
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 248 - 294
Target Start/End: Original strand, 16083068 - 16083114
Alignment:
Q  248 ttaatcatttaagatttcgtccctctccccacttaatcactgccaca 294  Q
    |||||||||||| ||||||| |||||||| |||||||||||||||||    
T  16083068 ttaatcatttaaaatttcgtacctctcccaacttaatcactgccaca 16083114  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #53
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 195 - 257
Target Start/End: Complemental strand, 39402210 - 39402148
Alignment:
Q  195 tttgatttttcatccatgagcttactaatcctcccattttacccttgtaaaaattaatcattt 257  Q
    ||||||||||||||| ||  |||||||||||||||||||| ||| || ||| |||||||||||    
T  39402210 tttgatttttcatccctggacttactaatcctcccattttgcccctgcaaatattaatcattt 39402148  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #54
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 248 - 301
Target Start/End: Original strand, 186510 - 186563
Alignment:
Q  248 ttaatcatttaagatttcgtccctctccccacttaatcactgccacatcactaa 301  Q
    |||||||||||| |||||||||||| ||||||||||||||| |||  |||||||    
T  186510 ttaatcatttaaaatttcgtccctccccccacttaatcactaccatgtcactaa 186563  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #55
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 248 - 293
Target Start/End: Original strand, 11761840 - 11761885
Alignment:
Q  248 ttaatcatttaagatttcgtccctctccccacttaatcactgccac 293  Q
    |||||||||||| ||||||||| |||||||||||||||| ||||||    
T  11761840 ttaatcatttaaaatttcgtccatctccccacttaatcattgccac 11761885  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #56
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 248 - 301
Target Start/End: Complemental strand, 16157192 - 16157139
Alignment:
Q  248 ttaatcatttaagatttcgtccctctccccacttaatcactgccacatcactaa 301  Q
    |||||||||||| |||| |||||||||||||||||||| ||||||  |||||||    
T  16157192 ttaatcatttaaaattttgtccctctccccacttaatccctgccatgtcactaa 16157139  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #57
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 248 - 301
Target Start/End: Original strand, 17202490 - 17202543
Alignment:
Q  248 ttaatcatttaagatttcgtccctctccccacttaatcactgccacatcactaa 301  Q
    |||| ||||||| |||||||||| |||||||||||||||||||||  |||||||    
T  17202490 ttaagcatttaaaatttcgtccccctccccacttaatcactgccatgtcactaa 17202543  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #58
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 248 - 301
Target Start/End: Original strand, 18247175 - 18247228
Alignment:
Q  248 ttaatcatttaagatttcgtccctctccccacttaatcactgccacatcactaa 301  Q
    |||||||||||  ||||||||||||||||||||||||||| ||||  |||||||    
T  18247175 ttaatcatttagaatttcgtccctctccccacttaatcaccgccatgtcactaa 18247228  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #59
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 248 - 301
Target Start/End: Complemental strand, 20814472 - 20814419
Alignment:
Q  248 ttaatcatttaagatttcgtccctctccccacttaatcactgccacatcactaa 301  Q
    |||||||||||| |||| ||||||||||| |||||||||||||||  |||||||    
T  20814472 ttaatcatttaaaattttgtccctctccctacttaatcactgccatgtcactaa 20814419  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #60
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 248 - 292
Target Start/End: Original strand, 18670290 - 18670334
Alignment:
Q  248 ttaatcatttaagatttcgtccctctccccacttaatcactgcca 292  Q
    |||||||||||| ||||||||| |||||||||||||||| |||||    
T  18670290 ttaatcatttaaaatttcgtccatctccccacttaatcattgcca 18670334  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #61
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 186 - 257
Target Start/End: Original strand, 8323085 - 8323156
Alignment:
Q  186 tataggtcatttgatttttcatccatgagcttactaatcctcccattttacccttgtaaaaattaatcattt 257  Q
    |||||||||||||| ||||| |||||||  ||||||||||| ||||||| || ||| | | |||||||||||    
T  8323085 tataggtcatttgaattttcgtccatgaagttactaatccttccattttgccattgaagatattaatcattt 8323156  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #62
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 178 - 257
Target Start/End: Original strand, 14745469 - 14745548
Alignment:
Q  178 cctgcaattataggtcatttgatttttcatccatgagcttactaatcctcccattttacccttgtaaaaattaatcattt 257  Q
    ||||||| |||||||||||||| ||||||||| |||  ||||||||||| ||| | | ||| || ||| |||||||||||    
T  14745469 cctgcaaatataggtcatttgaattttcatccctgaagttactaatccttccaatctgcccctgcaaatattaatcattt 14745548  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #63
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 158 - 257
Target Start/End: Original strand, 18934714 - 18934813
Alignment:
Q  158 gcttacatatgcatttcattcctgcaattataggtcatttgatttttcatccatgagcttactaatcctcccattttacccttgtaaaaattaatcattt 257  Q
    ||||| |||||  |||||| ||||||| |||| ||||||||| ||||| |||||||  |||||||||||  |||||| || ||| ||| |||| ||||||    
T  18934714 gcttaaatatgtctttcatccctgcaaatataagtcatttgaattttcgtccatgaagttactaatcctttcattttgccattgcaaatattagtcattt 18934813  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #64
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 158 - 257
Target Start/End: Original strand, 25253087 - 25253186
Alignment:
Q  158 gcttacatatgcatttcattcctgcaattataggtcatttgatttttcatccatgagcttactaatcctcccattttacccttgtaaaaattaatcattt 257  Q
    ||||| |||||  |||||| ||||||| ||||| |||||||| ||||| ||| |||  ||||||||||| ||| ||| ||| || ||| |||||||||||    
T  25253087 gcttaaatatgtctttcatccctgcaaatatagttcatttgaattttcgtccctgaagttactaatccttccaatttgcccctgcaaatattaatcattt 25253186  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #65
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 158 - 257
Target Start/End: Original strand, 25316877 - 25316976
Alignment:
Q  158 gcttacatatgcatttcattcctgcaattataggtcatttgatttttcatccatgagcttactaatcctcccattttacccttgtaaaaattaatcattt 257  Q
    ||||| |||||  |||||| ||||||| ||||| |||||||| ||||| ||| |||  ||||||||||| ||| ||| ||| || ||| |||||||||||    
T  25316877 gcttaaatatgtctttcatccctgcaaatatagttcatttgaattttcgtccctgaagttactaatccttccaatttgcccctgcaaatattaatcattt 25316976  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #66
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 247 - 301
Target Start/End: Original strand, 14194513 - 14194567
Alignment:
Q  247 attaatcatttaagatttcgtccctctccccacttaatcactgccacatcactaa 301  Q
    ||||||||||||| ||||||||| |   || ||||||||||||||||||||||||    
T  14194513 attaatcatttaaaatttcgtcctttgaccaacttaatcactgccacatcactaa 14194567  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #67
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 171 - 224
Target Start/End: Complemental strand, 12990965 - 12990912
Alignment:
Q  171 tttcattcctgcaattataggtcatttgatttttcatccatgagcttactaatc 224  Q
    |||||| ||||||| |||||||||||||| ||||| |||||||  |||||||||    
T  12990965 tttcatccctgcaaatataggtcatttgaattttcgtccatgaagttactaatc 12990912  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #68
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 171 - 224
Target Start/End: Complemental strand, 13064586 - 13064533
Alignment:
Q  171 tttcattcctgcaattataggtcatttgatttttcatccatgagcttactaatc 224  Q
    |||||| ||||||| |||||||||||||| ||||| |||||||  |||||||||    
T  13064586 tttcatccctgcaaatataggtcatttgaattttcgtccatgaagttactaatc 13064533  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #69
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 248 - 301
Target Start/End: Complemental strand, 40150151 - 40150098
Alignment:
Q  248 ttaatcatttaagatttcgtccctctccccacttaatcactgccacatcactaa 301  Q
    |||||||||||||| || |||||||  || | ||||||||||||||||||||||    
T  40150151 ttaatcatttaagaattggtccctcaacctaattaatcactgccacatcactaa 40150098  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #70
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 243 - 287
Target Start/End: Original strand, 14848825 - 14848869
Alignment:
Q  243 aaaaattaatcatttaagatttcgtccctctccccacttaatcac 287  Q
    |||| |||||||||||| |||| ||||||| ||||||||||||||    
T  14848825 aaaatttaatcatttaaaatttggtccctccccccacttaatcac 14848869  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #71
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 157 - 257
Target Start/End: Complemental strand, 25253470 - 25253370
Alignment:
Q  157 ggcttacatatgcatttcattcctgcaattataggtcatttgatttttcatccatgagcttactaatcctcccattttacccttgtaaaaattaatcatt 256  Q
    |||||| |||||  |||| | ||||||| |||||||||||||| ||||| ||| |||  ||||||||||| ||| | | |||||| ||| | ||||||||    
T  25253470 ggcttaaatatgtctttcgtccctgcaaatataggtcatttgaattttcgtccctgaagttactaatccttccaatctgcccttgcaaatactaatcatt 25253371  T
Q  257 t 257  Q
    |    
T  25253370 t 25253370  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #72
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 157 - 257
Target Start/End: Complemental strand, 25317261 - 25317161
Alignment:
Q  157 ggcttacatatgcatttcattcctgcaattataggtcatttgatttttcatccatgagcttactaatcctcccattttacccttgtaaaaattaatcatt 256  Q
    |||||| |||||  |||| | ||||||| |||||||||||||| ||||| ||| |||  ||||||||||| ||| | | |||||| ||| | ||||||||    
T  25317261 ggcttaaatatgtctttcgtccctgcaaatataggtcatttgaattttcgtccctgaagttactaatccttccaatctgcccttgcaaatactaatcatt 25317162  T
Q  257 t 257  Q
    |    
T  25317161 t 25317161  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #73
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 261 - 301
Target Start/End: Complemental strand, 27937343 - 27937303
Alignment:
Q  261 atttcgtccctctccccacttaatcactgccacatcactaa 301  Q
    |||| ||||||||||||||| |||||||||||| |||||||    
T  27937343 attttgtccctctccccactaaatcactgccacgtcactaa 27937303  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #74
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 157 - 257
Target Start/End: Complemental strand, 32052608 - 32052508
Alignment:
Q  157 ggcttacatatgcatttcattcctgcaattataggtcatttgatttttcatccatgagcttactaatcctcccattttacccttgtaaaaattaatcatt 256  Q
    |||||| |||||  |||| | ||||||| |||||||||||||| ||||| ||| |||  ||||||||||| ||| | | ||| || ||| ||||||||||    
T  32052608 ggcttaaatatgtctttcgtccctgcaaatataggtcatttgaattttcgtccctgaagttactaatccttccaatctgcccctgcaaatattaatcatt 32052509  T
Q  257 t 257  Q
    |    
T  32052508 t 32052508  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 85; Significance: 2e-40; HSPs: 67)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 157 - 293
Target Start/End: Complemental strand, 23455789 - 23455653
Alignment:
Q  157 ggcttacatatgcatttcattcctgcaattataggtcatttgatttttcatccatgagcttactaatcctcccattttacccttgtaaaaattaatcatt 256  Q
    |||||| ||||||||||||| |||| ||||||||||||||||||||||||| | |||||||||||||||||||||||| ||  |||||||||||||||||    
T  23455789 ggcttaaatatgcatttcatccctgtaattataggtcatttgatttttcattcctgagcttactaatcctcccattttgccactgtaaaaattaatcatt 23455690  T
Q  257 taagatttcgtccctctccccacttaatcactgccac 293  Q
    | | ||||||||||||| |||  ||||||||||||||    
T  23455689 tcaaatttcgtccctcttcccgattaatcactgccac 23455653  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 73; E-Value: 3e-33
Query Start/End: Original strand, 157 - 293
Target Start/End: Original strand, 23454954 - 23455090
Alignment:
Q  157 ggcttacatatgcatttcattcctgcaattataggtcatttgatttttcatccatgagcttactaatcctcccattttacccttgtaaaaattaatcatt 256  Q
    |||||| ||||||||||||| |||| ||||||||| ||||||||||||||||| |||||||||||||| ||||||||| ||| |||||||||||  ||||    
T  23454954 ggcttaaatatgcatttcatccctgtaattataggccatttgatttttcatccctgagcttactaatcatcccattttgcccctgtaaaaattacccatt 23455053  T
Q  257 taagatttcgtccctctccccacttaatcactgccac 293  Q
    ||| ||| ||||||||| ||   ||||||||||||||    
T  23455054 taaaattccgtccctcttcctgattaatcactgccac 23455090  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 66; E-Value: 5e-29
Query Start/End: Original strand, 164 - 293
Target Start/End: Complemental strand, 38982689 - 38982560
Alignment:
Q  164 atatgcatttcattcctgcaattataggtcatttgatttttcatccatgagcttactaatcctcccattttacccttgtaaaaattaatcatttaagatt 263  Q
    |||||| |||||| |||||||||||||| | ||||||||||||||| |||||||||||||||||||||||| ||| |||||  | ||||||||| | | |    
T  38982689 atatgcttttcatccctgcaattataggccgtttgatttttcatccctgagcttactaatcctcccattttgcccctgtaattactaatcatttgaaagt 38982590  T
Q  264 tcgtccctctccccacttaatcactgccac 293  Q
    ||||||||||||||   |||||||||||||    
T  38982589 tcgtccctctccccggataatcactgccac 38982560  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 61; E-Value: 5e-26
Query Start/End: Original strand, 157 - 257
Target Start/End: Complemental strand, 53477180 - 53477080
Alignment:
Q  157 ggcttacatatgcatttcattcctgcaattataggtcatttgatttttcatccatgagcttactaatcctcccattttacccttgtaaaaattaatcatt 256  Q
    |||||| |||||||||||||  ||||||||||||||||||||||||||||||  ||| |||||||||||||||||||| ||| || ||| ||||||||||    
T  53477180 ggcttaaatatgcatttcatctctgcaattataggtcatttgatttttcatctctgaacttactaatcctcccattttgcccctgcaaatattaatcatt 53477081  T
Q  257 t 257  Q
    |    
T  53477080 t 53477080  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 155 - 248
Target Start/End: Complemental strand, 54591680 - 54591587
Alignment:
Q  155 ttggcttacatatgcatttcattcctgcaattataggtcatttgatttttcatccatgagcttactaatcctcccattttacccttgtaaaaat 248  Q
    |||||||| ||||||||||||| ||||||||||||| |||||||||||||||||| ||| |||||||| ||||||||||| ||| || ||||||    
T  54591680 ttggcttaaatatgcatttcatccctgcaattatagatcatttgatttttcatccctgaacttactaaacctcccattttgcccctgcaaaaat 54591587  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 157 - 293
Target Start/End: Original strand, 56556582 - 56556718
Alignment:
Q  157 ggcttacatatgcatttcattcctgcaattataggtcatttgatttttcatccatgagcttactaatcctcccattttacccttgtaaaaattaatcatt 256  Q
    |||||| |||||| |||||| |||| ||||||||| | ||||||||||||||||||| |||||||||||| ||||||| ||| |||||  | ||||||||    
T  56556582 ggcttaaatatgcttttcatccctgtaattataggccgtttgatttttcatccatgaacttactaatccttccattttgcccctgtaattactaatcatt 56556681  T
Q  257 taagatttcgtccctctccccacttaatcactgccac 293  Q
    | | | ||||||||||| |||   |||||||||||||    
T  56556682 tgaaagttcgtccctcttcccggataatcactgccac 56556718  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 158 - 293
Target Start/End: Complemental strand, 56557424 - 56557289
Alignment:
Q  158 gcttacatatgcatttcattcctgcaattataggtcatttgatttttcatccatgagcttactaatcctcccattttacccttgtaaaaattaatcattt 257  Q
    ||||| |||||| |||||| |||  ||||||||| | ||||||||||||||||||| |||||||||||| ||||||| ||| |||||  | |||||||||    
T  56557424 gcttaaatatgcttttcatccctctaattataggccgtttgatttttcatccatgaacttactaatccttccattttgcccctgtaattactaatcattt 56557325  T
Q  258 aagatttcgtccctctccccacttaatcactgccac 293  Q
     | | ||||||||||| |||   |||||||||||||    
T  56557324 gaaagttcgtccctcttcccggataatcactgccac 56557289  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 155 - 293
Target Start/End: Original strand, 38813552 - 38813690
Alignment:
Q  155 ttggcttacatatgcatttcattcctgcaattataggtcatttgatttttcatccatgagcttactaatcctcccattttacccttgtaaaaattaatca 254  Q
    |||||||| |||||| |||||| |||| ||||||||| | ||||||||||||||| ||| |||||||||||| ||||||| ||| |||||  | |||| |    
T  38813552 ttggcttaaatatgcttttcatccctgtaattataggccgtttgatttttcatccctgaacttactaatccttccattttgcccctgtaattactaataa 38813651  T
Q  255 tttaagatttcgtccctctccccacttaatcactgccac 293  Q
    ||| | | ||||||||||| |||   |||||||||||||    
T  38813652 tttgaaagttcgtccctcttcccggataatcactgccac 38813690  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 157 - 232
Target Start/End: Complemental strand, 13336938 - 13336863
Alignment:
Q  157 ggcttacatatgcatttcattcctgcaattataggtcatttgatttttcatccatgagcttactaatcctcccatt 232  Q
    |||||| ||||||||||||| ||||||| ||||||||||||||  |||||||| ||| ||||||||||||||||||    
T  13336938 ggcttaaatatgcatttcatccctgcaaatataggtcatttgaaatttcatccctgaacttactaatcctcccatt 13336863  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 219 - 293
Target Start/End: Complemental strand, 4983061 - 4982987
Alignment:
Q  219 ctaatcctcccattttacccttgtaaaaattaatcatttaagatttcgtccctctccccacttaatcactgccac 293  Q
    ||||||||| || |||| ||||| ||  ||||||||||||| |||||||||||||||||||||||||||||||||    
T  4983061 ctaatcctcgcaatttagccttgcaattattaatcatttaaaatttcgtccctctccccacttaatcactgccac 4982987  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 219 - 301
Target Start/End: Original strand, 14801798 - 14801880
Alignment:
Q  219 ctaatcctcccattttacccttgtaaaaattaatcatttaagatttcgtccctctccccacttaatcactgccacatcactaa 301  Q
    ||||||||  || ||||||||||||    |||||||||||| ||||||||||||||||||||||||||||||||| |||||||    
T  14801798 ctaatcctgacaatttacccttgtattgtttaatcatttaaaatttcgtccctctccccacttaatcactgccacgtcactaa 14801880  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 164 - 234
Target Start/End: Original strand, 54590150 - 54590220
Alignment:
Q  164 atatgcatttcattcctgcaattataggtcatttgatttttcatccatgagcttactaatcctcccatttt 234  Q
    ||||||||||||| |||||||||||||||||||||||||||||||  ||| ||||||||| || |||||||    
T  54590150 atatgcatttcatccctgcaattataggtcatttgatttttcatctttgaacttactaattcttccatttt 54590220  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 248 - 301
Target Start/End: Complemental strand, 34765717 - 34765664
Alignment:
Q  248 ttaatcatttaagatttcgtccctctccccacttaatcactgccacatcactaa 301  Q
    |||||||||||| ||||||||||||||||||||||||||||||||| |||||||    
T  34765717 ttaatcatttaaaatttcgtccctctccccacttaatcactgccacgtcactaa 34765664  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 157 - 293
Target Start/End: Complemental strand, 38814427 - 38814291
Alignment:
Q  157 ggcttacatatgcatttcattcctgcaattataggtcatttgatttttcatccatgagcttactaatcctcccattttacccttgtaaaaattaatcatt 256  Q
    |||||| |||||| |||||| | || |||| |||| | ||||||||||||||| ||| |||||||||||| ||||||| ||| |||||  | ||||||||    
T  38814427 ggcttaaatatgcttttcatccttgtaattttaggccgtttgatttttcatccctgaacttactaatccttccattttgcccctgtaattactaatcatt 38814328  T
Q  257 taagatttcgtccctctccccacttaatcactgccac 293  Q
    | | | ||||||||||| |||   |||||||||||||    
T  38814327 tgaaagttcgtccctcttcccggataatcactgccac 38814291  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 157 - 293
Target Start/End: Complemental strand, 52816523 - 52816387
Alignment:
Q  157 ggcttacatatgcatttcattcctgcaattataggtcatttgatttttcatccatgagcttactaatcctcccattttacccttgtaaaaattaatcatt 256  Q
    |||||| |||||  |||||| |||| ||||||||| | ||||||||||||||  ||| |||||||||||| ||||||| ||| |||||  | ||||||||    
T  52816523 ggcttaaatatgattttcatccctgtaattataggccgtttgatttttcatctctgaacttactaatccttccattttgcccctgtaattactaatcatt 52816424  T
Q  257 taagatttcgtccctctccccacttaatcactgccac 293  Q
    | | | ||||||||||| |||   |||||||||||||    
T  52816423 tgaaagttcgtccctcttcccggataatcactgccac 52816387  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 247 - 301
Target Start/End: Original strand, 16605692 - 16605746
Alignment:
Q  247 attaatcatttaagatttcgtccctctccccacttaatcactgccacatcactaa 301  Q
    ||||||||||||| |||||||||||| |||||||||||||||||||| |||||||    
T  16605692 attaatcatttaaaatttcgtccctccccccacttaatcactgccacgtcactaa 16605746  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 247 - 301
Target Start/End: Original strand, 24349764 - 24349818
Alignment:
Q  247 attaatcatttaagatttcgtccctctccccacttaatcactgccacatcactaa 301  Q
    ||||||||||||| |||||||||||||||||| |||||||||||||| |||||||    
T  24349764 attaatcatttaaaatttcgtccctctccccagttaatcactgccacgtcactaa 24349818  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 248 - 294
Target Start/End: Complemental strand, 44967375 - 44967329
Alignment:
Q  248 ttaatcatttaagatttcgtccctctccccacttaatcactgccaca 294  Q
    |||||||||||| ||||||||||||||||||||||||||||||||||    
T  44967375 ttaatcatttaaaatttcgtccctctccccacttaatcactgccaca 44967329  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 255 - 301
Target Start/End: Complemental strand, 53129836 - 53129790
Alignment:
Q  255 tttaagatttcgtccctctccccacttaatcactgccacatcactaa 301  Q
    ||||| |||||||||||||||||||||||||||||||||||||||||    
T  53129836 tttaaaatttcgtccctctccccacttaatcactgccacatcactaa 53129790  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 248 - 293
Target Start/End: Complemental strand, 9145072 - 9145027
Alignment:
Q  248 ttaatcatttaagatttcgtccctctccccacttaatcactgccac 293  Q
    |||||||||||| |||||||||||||||||||||||||||||||||    
T  9145072 ttaatcatttaaaatttcgtccctctccccacttaatcactgccac 9145027  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 248 - 293
Target Start/End: Original strand, 13058128 - 13058173
Alignment:
Q  248 ttaatcatttaagatttcgtccctctccccacttaatcactgccac 293  Q
    |||||||||||| |||||||||||||||||||||||||||||||||    
T  13058128 ttaatcatttaaaatttcgtccctctccccacttaatcactgccac 13058173  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 248 - 293
Target Start/End: Original strand, 23613400 - 23613445
Alignment:
Q  248 ttaatcatttaagatttcgtccctctccccacttaatcactgccac 293  Q
    |||||||||||| |||||||||||||||||||||||||||||||||    
T  23613400 ttaatcatttaaaatttcgtccctctccccacttaatcactgccac 23613445  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 248 - 293
Target Start/End: Original strand, 27934623 - 27934668
Alignment:
Q  248 ttaatcatttaagatttcgtccctctccccacttaatcactgccac 293  Q
    |||||||||||| |||||||||||||||||||||||||||||||||    
T  27934623 ttaatcatttaaaatttcgtccctctccccacttaatcactgccac 27934668  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 248 - 301
Target Start/End: Complemental strand, 35028335 - 35028282
Alignment:
Q  248 ttaatcatttaagatttcgtccctctccccacttaatcactgccacatcactaa 301  Q
    |||||||||||| |||||||| |||||||||||||||||||||||| |||||||    
T  35028335 ttaatcatttaaaatttcgtcactctccccacttaatcactgccacgtcactaa 35028282  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 248 - 293
Target Start/End: Complemental strand, 36009150 - 36009105
Alignment:
Q  248 ttaatcatttaagatttcgtccctctccccacttaatcactgccac 293  Q
    |||||||||||| |||||||||||||||||||||||||||||||||    
T  36009150 ttaatcatttaaaatttcgtccctctccccacttaatcactgccac 36009105  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 248 - 293
Target Start/End: Complemental strand, 42738337 - 42738292
Alignment:
Q  248 ttaatcatttaagatttcgtccctctccccacttaatcactgccac 293  Q
    |||||||||||| |||||||||||||||||||||||||||||||||    
T  42738337 ttaatcatttaaaatttcgtccctctccccacttaatcactgccac 42738292  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 248 - 293
Target Start/End: Complemental strand, 43155833 - 43155788
Alignment:
Q  248 ttaatcatttaagatttcgtccctctccccacttaatcactgccac 293  Q
    |||||||||||| |||||||||||||||||||||||||||||||||    
T  43155833 ttaatcatttaaaatttcgtccctctccccacttaatcactgccac 43155788  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 248 - 293
Target Start/End: Complemental strand, 49879513 - 49879468
Alignment:
Q  248 ttaatcatttaagatttcgtccctctccccacttaatcactgccac 293  Q
    |||||||||||| |||||||||||||||||||||||||||||||||    
T  49879513 ttaatcatttaaaatttcgtccctctccccacttaatcactgccac 49879468  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 243 - 300
Target Start/End: Original strand, 52298112 - 52298169
Alignment:
Q  243 aaaaattaatcatttaagatttcgtccctctccccacttaatcactgccacatcacta 300  Q
    |||| |||||||||||| |||||||| |||||||||||||||||||||||| ||||||    
T  52298112 aaaatttaatcatttaaaatttcgtctctctccccacttaatcactgccacgtcacta 52298169  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 248 - 301
Target Start/End: Original strand, 53701903 - 53701956
Alignment:
Q  248 ttaatcatttaagatttcgtccctctccccacttaatcactgccacatcactaa 301  Q
    |||||||||||| ||||| ||||||||||||||||||||||||||| |||||||    
T  53701903 ttaatcatttaaaatttcttccctctccccacttaatcactgccacgtcactaa 53701956  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 164 - 232
Target Start/End: Complemental strand, 22882420 - 22882352
Alignment:
Q  164 atatgcatttcattcctgcaattataggtcatttgatttttcatccatgagcttactaatcctcccatt 232  Q
    ||||||||||||| ||||||| ||||||||||||||  |||||||| ||| |||| |||||||||||||    
T  22882420 atatgcatttcatccctgcaaatataggtcatttgaaatttcatccctgaacttaataatcctcccatt 22882352  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 164 - 232
Target Start/End: Complemental strand, 22934084 - 22934016
Alignment:
Q  164 atatgcatttcattcctgcaattataggtcatttgatttttcatccatgagcttactaatcctcccatt 232  Q
    ||||||||||||| ||||||| ||||||||||||||  |||||||| ||| |||| |||||||||||||    
T  22934084 atatgcatttcatccctgcaaatataggtcatttgaaatttcatccctgaacttaataatcctcccatt 22934016  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 157 - 293
Target Start/End: Original strand, 52815663 - 52815799
Alignment:
Q  157 ggcttacatatgcatttcattcctgcaattataggtcatttgatttttcatccatgagcttactaatcctcccattttacccttgtaaaaattaatcatt 256  Q
    |||||| |||||| |||||| |||| ||||||||| | |||||||||| |||| ||| ||||||||||||  |||||| ||| |||||  | |||||| |    
T  52815663 ggcttaaatatgcttttcatccctgtaattataggccgtttgattttttatccctgaacttactaatcctttcattttgcccctgtaattactaatcact 52815762  T
Q  257 taagatttcgtccctctccccacttaatcactgccac 293  Q
    | | | ||||||||||| |||   |||||||||||||    
T  52815763 tgaaagttcgtccctcttcccggataatcactgccac 52815799  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 157 - 257
Target Start/End: Complemental strand, 55013188 - 55013089
Alignment:
Q  157 ggcttacatatgcatttcattcctgcaattataggtcatttgatttttcatccatgagcttactaatcctcccattttacccttgtaaaaattaatcatt 256  Q
    |||||| |||||| |||||| | || |||||||||  |||||||||||||||| |||||||||||||||||||| ||| ||| |||||  | ||||||||    
T  55013188 ggcttaaatatgcttttcatccatgtaattataggctatttgatttttcatcc-tgagcttactaatcctcccagtttgcccctgtaattactaatcatt 55013090  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 251 - 301
Target Start/End: Complemental strand, 17356256 - 17356206
Alignment:
Q  251 atcatttaagatttcgtccctctccccacttaatcactgccacatcactaa 301  Q
    ||||||||| ||||||||||||||||||||||||||||| ||| |||||||    
T  17356256 atcatttaaaatttcgtccctctccccacttaatcactgtcacgtcactaa 17356206  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 237 - 299
Target Start/End: Original strand, 48528552 - 48528614
Alignment:
Q  237 ccttgtaaaaattaatcatttaagatttcgtccctctccccacttaatcactgccacatcact 299  Q
    ||||| |||| |||||||||||| ||||||| ||| ||||||||||||||||| |||||||||    
T  48528552 ccttgcaaaatttaatcatttaaaatttcgttcctatccccacttaatcactgtcacatcact 48528614  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 248 - 293
Target Start/End: Original strand, 5369038 - 5369083
Alignment:
Q  248 ttaatcatttaagatttcgtccctctccccacttaatcactgccac 293  Q
    |||||||||||| |||| ||||||||||||||||||||||||||||    
T  5369038 ttaatcatttaaaattttgtccctctccccacttaatcactgccac 5369083  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 248 - 293
Target Start/End: Complemental strand, 9400825 - 9400780
Alignment:
Q  248 ttaatcatttaagatttcgtccctctccccacttaatcactgccac 293  Q
    |||||||||||| ||||| |||||||||||||||||||||||||||    
T  9400825 ttaatcatttaaaatttcatccctctccccacttaatcactgccac 9400780  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 248 - 301
Target Start/End: Complemental strand, 15508010 - 15507957
Alignment:
Q  248 ttaatcatttaagatttcgtccctctccccacttaatcactgccacatcactaa 301  Q
    |||||||||||| |||||||| |||||||||||||||||||||| | |||||||    
T  15508010 ttaatcatttaaaatttcgtctctctccccacttaatcactgccgcgtcactaa 15507957  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 248 - 293
Target Start/End: Original strand, 18831440 - 18831485
Alignment:
Q  248 ttaatcatttaagatttcgtccctctccccacttaatcactgccac 293  Q
    |||||||||||| |||||||| ||||||||||||||||||||||||    
T  18831440 ttaatcatttaaaatttcgtctctctccccacttaatcactgccac 18831485  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 248 - 293
Target Start/End: Original strand, 22566890 - 22566935
Alignment:
Q  248 ttaatcatttaagatttcgtccctctccccacttaatcactgccac 293  Q
    |||||||||||| ||||| |||||||||||||||||||||||||||    
T  22566890 ttaatcatttaaaatttcatccctctccccacttaatcactgccac 22566935  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 248 - 293
Target Start/End: Original strand, 24711202 - 24711247
Alignment:
Q  248 ttaatcatttaagatttcgtccctctccccacttaatcactgccac 293  Q
    |||||||||||| |||||||||||||||||||||||||||| ||||    
T  24711202 ttaatcatttaaaatttcgtccctctccccacttaatcactaccac 24711247  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 248 - 293
Target Start/End: Original strand, 32950233 - 32950278
Alignment:
Q  248 ttaatcatttaagatttcgtccctctccccacttaatcactgccac 293  Q
    |||||||||||| |||||||| ||||||||||||||||||||||||    
T  32950233 ttaatcatttaaaatttcgtctctctccccacttaatcactgccac 32950278  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 248 - 293
Target Start/End: Complemental strand, 33247579 - 33247534
Alignment:
Q  248 ttaatcatttaagatttcgtccctctccccacttaatcactgccac 293  Q
    |||||||||||| ||||| |||||||||||||||||||||||||||    
T  33247579 ttaatcatttaaaatttcatccctctccccacttaatcactgccac 33247534  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 248 - 293
Target Start/End: Complemental strand, 34837380 - 34837335
Alignment:
Q  248 ttaatcatttaagatttcgtccctctccccacttaatcactgccac 293  Q
    |||||| ||||| |||||||||||||||||||||||||||||||||    
T  34837380 ttaatcgtttaaaatttcgtccctctccccacttaatcactgccac 34837335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 248 - 301
Target Start/End: Complemental strand, 37976490 - 37976437
Alignment:
Q  248 ttaatcatttaagatttcgtccctctccccacttaatcactgccacatcactaa 301  Q
    |||||||||||| |||||||| |||||||||||||||||||||||  |||||||    
T  37976490 ttaatcatttaaaatttcgtcactctccccacttaatcactgccatgtcactaa 37976437  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 248 - 289
Target Start/End: Complemental strand, 50418974 - 50418933
Alignment:
Q  248 ttaatcatttaagatttcgtccctctccccacttaatcactg 289  Q
    |||||||||||| |||||||||||||||||||||||||||||    
T  50418974 ttaatcatttaaaatttcgtccctctccccacttaatcactg 50418933  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 248 - 301
Target Start/End: Original strand, 52909344 - 52909397
Alignment:
Q  248 ttaatcatttaagatttcgtccctctccccacttaatcactgccacatcactaa 301  Q
    |||||||||||| ||||||||| ||||||||||||||||||||||  |||||||    
T  52909344 ttaatcatttaaaatttcgtccatctccccacttaatcactgccatgtcactaa 52909397  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 243 - 299
Target Start/End: Complemental strand, 48529918 - 48529862
Alignment:
Q  243 aaaaattaatcatttaagatttcgtccctctccccacttaatcactgccacatcact 299  Q
    |||| |||||||||||| |||| ||||||||| |||||||||||||||||| |||||    
T  48529918 aaaatttaatcatttaaaattttgtccctctctccacttaatcactgccacgtcact 48529862  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 164 - 227
Target Start/End: Original strand, 9254413 - 9254476
Alignment:
Q  164 atatgcatttcattcctgcaattataggtcatttgatttttcatccatgagcttactaatcctc 227  Q
    ||||||||||||| ||||||| |||||| |||||||  |||||||| ||| |||||||||||||    
T  9254413 atatgcatttcatccctgcaaatataggccatttgaaatttcatccttgaacttactaatcctc 9254476  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 248 - 291
Target Start/End: Original strand, 37248327 - 37248370
Alignment:
Q  248 ttaatcatttaagatttcgtccctctccccacttaatcactgcc 291  Q
    |||||||||||| |||||||| ||||||||||||||||||||||    
T  37248327 ttaatcatttaaaatttcgtcgctctccccacttaatcactgcc 37248370  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #52
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 243 - 298
Target Start/End: Complemental strand, 41583573 - 41583518
Alignment:
Q  243 aaaaattaatcatttaagatttcgtccctctccccacttaatcactgccacatcac 298  Q
    |||| |||||||||||| ||||||||||||| | ||||||||||||||||| ||||    
T  41583573 aaaagttaatcatttaaaatttcgtccctcttctcacttaatcactgccacgtcac 41583518  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #53
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 247 - 301
Target Start/End: Complemental strand, 10781822 - 10781768
Alignment:
Q  247 attaatcatttaagatttcgtccctctccccacttaatcactgccacatcactaa 301  Q
    ||||||||||||| |||||||||||||||||| |||| ||||| ||| |||||||    
T  10781822 attaatcatttaaaatttcgtccctctccccagttaaccactgtcacgtcactaa 10781768  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #54
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 248 - 294
Target Start/End: Original strand, 16005929 - 16005975
Alignment:
Q  248 ttaatcatttaagatttcgtccctctccccacttaatcactgccaca 294  Q
    |||||||||||| |||||||||||||||| |||||||||||| ||||    
T  16005929 ttaatcatttaaaatttcgtccctctccctacttaatcactgtcaca 16005975  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #55
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 248 - 293
Target Start/End: Original strand, 38012261 - 38012306
Alignment:
Q  248 ttaatcatttaagatttcgtccctctccccacttaatcactgccac 293  Q
    |||||| ||||| |||||||| ||||||||||||||||||||||||    
T  38012261 ttaatcgtttaaaatttcgtctctctccccacttaatcactgccac 38012306  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #56
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 248 - 292
Target Start/End: Complemental strand, 35508577 - 35508533
Alignment:
Q  248 ttaatcatttaagatttcgtccctctccccacttaatcactgcca 292  Q
    |||||||||||| |||||||  |||||||||||||||||||||||    
T  35508577 ttaatcatttaaaatttcgtatctctccccacttaatcactgcca 35508533  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #57
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 248 - 288
Target Start/End: Complemental strand, 54087032 - 54086992
Alignment:
Q  248 ttaatcatttaagatttcgtccctctccccacttaatcact 288  Q
    |||||||||||| |||||||| |||||||||||||||||||    
T  54087032 ttaatcatttaaaatttcgtctctctccccacttaatcact 54086992  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #58
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 243 - 298
Target Start/End: Original strand, 40387553 - 40387608
Alignment:
Q  243 aaaaattaatcatttaagatttcgtccctctccccacttaatcactgccacatcac 298  Q
    |||| |||||||||||| ||||||| ||||| | ||||||||||||||||| ||||    
T  40387553 aaaagttaatcatttaaaatttcgttcctcttctcacttaatcactgccacgtcac 40387608  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #59
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 171 - 226
Target Start/End: Complemental strand, 50246228 - 50246173
Alignment:
Q  171 tttcattcctgcaattataggtcatttgatttttcatccatgagcttactaatcct 226  Q
    |||||| ||||||| |||||||||||||| ||||| |||||||  |||||||||||    
T  50246228 tttcatccctgcaaatataggtcatttgaattttcgtccatgaagttactaatcct 50246173  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #60
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 243 - 301
Target Start/End: Complemental strand, 7280448 - 7280390
Alignment:
Q  243 aaaaattaatcatttaagatttcgtccctctccccacttaatcactgccacatcactaa 301  Q
    |||| ||||||| |||| |||  ||| |||||||||||||||||||||||| |||||||    
T  7280448 aaaatttaatcacttaaaattatgtctctctccccacttaatcactgccacgtcactaa 7280390  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #61
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 247 - 301
Target Start/End: Complemental strand, 14802073 - 14802019
Alignment:
Q  247 attaatcatttaagatttcgtccctctccccacttaatcactgccacatcactaa 301  Q
    ||||||||||||| ||||||||| |   || ||||||||||||||||||||||||    
T  14802073 attaatcatttaaaatttcgtcctttgaccaacttaatcactgccacatcactaa 14802019  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #62
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 171 - 224
Target Start/End: Original strand, 22249940 - 22249993
Alignment:
Q  171 tttcattcctgcaattataggtcatttgatttttcatccatgagcttactaatc 224  Q
    |||||| ||||||| |||||||||||||| ||||||||| |||  |||||||||    
T  22249940 tttcatccctgcaaatataggtcatttgaattttcatccctgaagttactaatc 22249993  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #63
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 248 - 301
Target Start/End: Original strand, 24411449 - 24411502
Alignment:
Q  248 ttaatcatttaagatttcgtccctctccccacttaatcactgccacatcactaa 301  Q
    ||||||||||||   ||||||||||| |||||||||||||| |||| |||||||    
T  24411449 ttaatcatttaaagattcgtccctcttcccacttaatcactcccacgtcactaa 24411502  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #64
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 248 - 289
Target Start/End: Original strand, 51692644 - 51692685
Alignment:
Q  248 ttaatcatttaagatttcgtccctctccccacttaatcactg 289  Q
    ||||||| |||| ||||||||||||||||||||| |||||||    
T  51692644 ttaatcacttaaaatttcgtccctctccccacttgatcactg 51692685  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #65
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 248 - 293
Target Start/End: Complemental strand, 55867451 - 55867406
Alignment:
Q  248 ttaatcatttaagatttcgtccctctccccacttaatcactgccac 293  Q
    |||||||||||| ||||||||||| | |||| ||||||||||||||    
T  55867451 ttaatcatttaaaatttcgtccctattcccagttaatcactgccac 55867406  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #66
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 237 - 293
Target Start/End: Complemental strand, 8439572 - 8439516
Alignment:
Q  237 ccttgtaaaaattaatcatttaagatttcgtccctctccccacttaatcactgccac 293  Q
    ||||| ||| ||||||||||||| |||||||||||   ||||||||||||| |||||    
T  8439572 ccttgcaaacattaatcatttaaaatttcgtcccttgacccacttaatcaccgccac 8439516  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #67
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 249 - 301
Target Start/End: Complemental strand, 54435433 - 54435381
Alignment:
Q  249 taatcatttaagatttcgtccctctccccacttaatcactgccacatcactaa 301  Q
    |||| |||||| ||||||||||||| ||| ||||||||||  |||||||||||    
T  54435433 taattatttaaaatttcgtccctcttcccccttaatcactaacacatcactaa 54435381  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 85; Significance: 2e-40; HSPs: 58)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 157 - 293
Target Start/End: Complemental strand, 32717205 - 32717069
Alignment:
Q  157 ggcttacatatgcatttcattcctgcaattataggtcatttgatttttcatccatgagcttactaatcctcccattttacccttgtaaaaattaatcatt 256  Q
    |||||| ||||||||||||| |||| ||||||||||||||||||||||||||| | | |||||||||||| ||||||| ||| |||||||||||||||||    
T  32717205 ggcttaaatatgcatttcatccctgtaattataggtcatttgatttttcatccctaaacttactaatccttccattttgcccctgtaaaaattaatcatt 32717106  T
Q  257 taagatttcgtccctctccccacttaatcactgccac 293  Q
    ||| ||||||||||||| |||| ||||| ||||||||    
T  32717105 taaaatttcgtccctcttcccaattaattactgccac 32717069  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 79; E-Value: 9e-37
Query Start/End: Original strand, 164 - 310
Target Start/End: Original strand, 29192042 - 29192188
Alignment:
Q  164 atatgcatttcattcctgcaattataggtcatttgatttttcatccatgagcttactaatcctcccattttacccttgtaaaaattaatcatttaagatt 263  Q
    ||||||||||||| |||| ||||||||| ||||||||||||||| | |||||||||||||||| || |||| ||| |||||||||||||||||||| |||    
T  29192042 atatgcatttcatccctgtaattataggccatttgatttttcattcctgagcttactaatccttccgttttgcccctgtaaaaattaatcatttaaaatt 29192141  T
Q  264 tcgtccctctccccacttaatcactgccacatcactaagtcagcaaa 310  Q
    |||||||||| |||  |||||||||||||| ||| ||| | ||||||    
T  29192142 tcgtccctcttcccgattaatcactgccacgtcattaaattagcaaa 29192188  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 157 - 289
Target Start/End: Complemental strand, 29193093 - 29192961
Alignment:
Q  157 ggcttacatatgcatttcattcctgcaattataggtcatttgatttttcatccatgagcttactaatcctcccattttacccttgtaaaaattaatcatt 256  Q
    |||||| ||||||||||||| |||| ||||||||| ||||||||||||||||| |||||||||||||||||||||||  ||| ||||||||||||| |||    
T  29193093 ggcttaaatatgcatttcatccctgtaattataggccatttgatttttcatccctgagcttactaatcctcccatttcgcccctgtaaaaattaattatt 29192994  T
Q  257 taagatttcgtccctctccccacttaatcactg 289  Q
    ||| |||| |||||||| |||  ||||||||||    
T  29192993 taaaattttgtccctcttcccgattaatcactg 29192961  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 157 - 293
Target Start/End: Original strand, 2943913 - 2944049
Alignment:
Q  157 ggcttacatatgcatttc-attcctgcaattataggtcatttgatttttcatccatgagcttactaatcctcccattttacccttgtaaaaattaatcat 255  Q
    |||||| |||||| |||| || |||||||||||||| | ||||||||||||||| |||||||||||||||||| ||||| ||| ||||||| ||||||||    
T  2943913 ggcttaaatatgcttttctatccctgcaattataggccgtttgatttttcatcc-tgagcttactaatcctcctattttgcccctgtaaaagttaatcat 2944011  T
Q  256 ttaagatttcgtccctctccccacttaatcactgccac 293  Q
    || | | ||||||||||| |||  ||||||||||||||    
T  2944012 ttgaaagttcgtccctcttcccggttaatcactgccac 2944049  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 164 - 293
Target Start/End: Original strand, 37249206 - 37249335
Alignment:
Q  164 atatgcatttcattcctgcaattataggtcatttgatttttcatccatgagcttactaatcctcccattttacccttgtaaaaattaatcatttaagatt 263  Q
    |||||| |||||| |||||||||||||| | ||||||||||||||| |||||||| ||||||||||||||| ||| |||||  | ||||||||| | | |    
T  37249206 atatgcttttcatccctgcaattataggccgtttgatttttcatccctgagcttattaatcctcccattttgcccctgtaattactaatcatttgaaagt 37249305  T
Q  264 tcgtccctctccccacttaatcactgccac 293  Q
    ||||||||||||||   |||||||||||||    
T  37249306 tcgtccctctccccggataatcactgccac 37249335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 61; E-Value: 5e-26
Query Start/End: Original strand, 193 - 293
Target Start/End: Original strand, 32716285 - 32716385
Alignment:
Q  193 catttgatttttcatccatgagcttactaatcctcccattttacccttgtaaaaattaatcatttaagatttcgtccctctccccacttaatcactgcca 292  Q
    |||||||||||| |||| |||| |||||||||||| ||||||||||||||||||||||| ||||||| ||||||||||||| ||   |||||||||||||    
T  32716285 catttgattttttatccttgagtttactaatcctctcattttacccttgtaaaaattaaccatttaaaatttcgtccctcttccagattaatcactgcca 32716384  T
Q  293 c 293  Q
    |    
T  32716385 c 32716385  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 164 - 293
Target Start/End: Complemental strand, 37249890 - 37249762
Alignment:
Q  164 atatgcatttcattcctgcaattataggtcatttgatttttcatccatgagcttactaatcctcccattttacccttgtaaaaattaatcatttaagatt 263  Q
    |||||| |||||| |||||||||||||| | ||||||||||||||| |||||||||||||||||||||| | |||||||||  | ||||||||| | | |    
T  37249890 atatgcttttcat-cctgcaattataggccgtttgatttttcatccctgagcttactaatcctcccattctgcccttgtaattactaatcatttgaaagt 37249792  T
Q  264 tcgtccctctccccacttaatcactgccac 293  Q
    |||||||||| |||   |||||||||||||    
T  37249791 tcgtccctcttcccggataatcactgccac 37249762  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 157 - 257
Target Start/End: Complemental strand, 22736790 - 22736690
Alignment:
Q  157 ggcttacatatgcatttcattcctgcaattataggtcatttgatttttcatccatgagcttactaatcctcccattttacccttgtaaaaattaatcatt 256  Q
    |||||| |||||  |||||| |||| ||||||||||||||||||||||||||| |||||||||||||||||||||||| ||| |||||  | ||||||||    
T  22736790 ggcttaaatatgtttttcatccctgtaattataggtcatttgatttttcatccctgagcttactaatcctcccattttgcccctgtaattactaatcatt 22736691  T
Q  257 t 257  Q
    |    
T  22736690 t 22736690  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 155 - 293
Target Start/End: Complemental strand, 45279386 - 45279248
Alignment:
Q  155 ttggcttacatatgcatttcattcctgcaattataggtcatttgatttttcatccatgagcttactaatcctcccattttacccttgtaaaaattaatca 254  Q
    |||||||| |||||| |||||| |||| ||||||||| | ||||||||||||||| ||| |||||||||||| ||||||| ||| |||||  | ||||||    
T  45279386 ttggcttaaatatgcttttcatccctgtaattataggccgtttgatttttcatccctgaacttactaatccttccattttgcccctgtaattactaatca 45279287  T
Q  255 tttaagatttcgtccctctccccacttaatcactgccac 293  Q
    ||| | | ||||||||||| |||   |||||||||||||    
T  45279286 tttgaaagttcgtccctcttcccggataatcactgccac 45279248  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 164 - 257
Target Start/End: Complemental strand, 44482046 - 44481953
Alignment:
Q  164 atatgcatttcattcctgcaattataggtcatttgatttttcatccatgagcttactaatcctcccattttacccttgtaaaaattaatcattt 257  Q
    |||||| |||||| |||| |||||| || |||||||||||||||||||||||||||||||||||||||||| ||| |||||  | |||||||||    
T  44482046 atatgcttttcatccctgtaattatgggccatttgatttttcatccatgagcttactaatcctcccattttgcccctgtaattactaatcattt 44481953  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 157 - 293
Target Start/End: Complemental strand, 48189199 - 48189063
Alignment:
Q  157 ggcttacatatgcatttcattcctgcaattataggtcatttgatttttcatccatgagcttactaatcctcccattttacccttgtaaaaattaatcatt 256  Q
    |||||| |||||| |||||| | || ||||||||| | ||||||||||||||| |||||||||||||||| ||||||| ||| |||||  | ||||||||    
T  48189199 ggcttaaatatgcttttcatccttgtaattataggccgtttgatttttcatccctgagcttactaatccttccattttgcccctgtaattactaatcatt 48189100  T
Q  257 taagatttcgtccctctccccacttaatcactgccac 293  Q
    | | | ||||||||||| |||   |||||||||||||    
T  48189099 tgaaagttcgtccctcttcccggataatcactgccac 48189063  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 248 - 301
Target Start/End: Complemental strand, 23458316 - 23458263
Alignment:
Q  248 ttaatcatttaagatttcgtccctctccccacttaatcactgccacatcactaa 301  Q
    |||||||||||| |||||||||||||||||||||||||||||||||||||||||    
T  23458316 ttaatcatttaaaatttcgtccctctccccacttaatcactgccacatcactaa 23458263  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 157 - 293
Target Start/End: Complemental strand, 2944766 - 2944630
Alignment:
Q  157 ggcttacatatgcatttcattcctgcaattataggtcatttgatttttcatccatgagcttactaatcctcccattttacccttgtaaaaattaatcatt 256  Q
    |||||| |||||| |||||| |||| ||||||||| | ||||||||||||||| ||| |||||||||||  ||||||| ||| |||||  | ||||||||    
T  2944766 ggcttaaatatgcttttcatccctgtaattataggccgtttgatttttcatccctgaacttactaatccatccattttgcccctgtaattactaatcatt 2944667  T
Q  257 taagatttcgtccctctccccacttaatcactgccac 293  Q
    | | | ||||||||||| |||   |||||||||||||    
T  2944666 tgaaagttcgtccctcttcccgaataatcactgccac 2944630  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 183 - 293
Target Start/End: Original strand, 1756576 - 1756686
Alignment:
Q  183 aattataggtcatttgatttttcatccatgagcttactaatcctcccattttacccttgtaaaaattaatcatttaagatttcgtccctctccccactta 282  Q
    ||||||||| | ||||||||||||||||||| |||||||||||| ||||||| ||| |||||  | ||||||||| | | ||||||||||| |||   ||    
T  1756576 aattataggccgtttgatttttcatccatgaacttactaatccttccattttgcccctgtaattactaatcatttgaaagttcgtccctcttcccggata 1756675  T
Q  283 atcactgccac 293  Q
    |||||||||||    
T  1756676 atcactgccac 1756686  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 155 - 273
Target Start/End: Complemental strand, 11026734 - 11026616
Alignment:
Q  155 ttggcttacatatgcatttcattcctgcaattataggtcatttgatttttcatccatgagcttactaatcctcccattttacccttgtaaaaattaatca 254  Q
    |||||||| |||||| |||||| |||| ||||||||| | ||||||||||||||| ||| ||||| |||||| ||||||| ||| |||||  | ||||||    
T  11026734 ttggcttaaatatgcttttcatccctgtaattataggccgtttgatttttcatccctgaacttaccaatccttccattttgcccctgtaattactaatca 11026635  T
Q  255 tttaagatttcgtccctct 273  Q
    ||| | | |||||||||||    
T  11026634 tttgaaagttcgtccctct 11026616  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 219 - 301
Target Start/End: Complemental strand, 33689745 - 33689663
Alignment:
Q  219 ctaatcctcccattttacccttgtaaaaattaatcatttaagatttcgtccctctccccacttaatcactgccacatcactaa 301  Q
    ||||||||  || |||||||||| |  | |||||||||||| ||||||||||||||||||||||||||||||||| |||||||    
T  33689745 ctaatcctggcaatttacccttgcattatttaatcatttaaaatttcgtccctctccccacttaatcactgccacgtcactaa 33689663  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 171 - 293
Target Start/End: Original strand, 48188392 - 48188514
Alignment:
Q  171 tttcattcctgcaattataggtcatttgatttttcatccatgagcttactaatcctcccattttacccttgtaaaaattaatcatttaagatttcgtccc 270  Q
    |||||| |||| ||||||||| | ||||||||||||||| ||| |||||||||||| ||||||| ||| |||||  | ||||||||| | | ||||||||    
T  48188392 tttcatccctgtaattataggccgtttgatttttcatccctgaacttactaatccttccattttgcccctgtaattactaatcatttgaaagttcgtccc 48188491  T
Q  271 tctccccacttaatcactgccac 293  Q
    ||| |||   |||||||||||||    
T  48188492 tcttcccggataatcactgccac 48188514  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 164 - 293
Target Start/End: Original strand, 45278551 - 45278680
Alignment:
Q  164 atatgcatttcattcctgcaattataggtcatttgatttttcatccatgagcttactaatcctcccattttacccttgtaaaaattaatcatttaagatt 263  Q
    |||||| |||||| |||| ||||||||| | ||||||||||||||| |||  ||||||||||| ||||||| ||| |||||  | ||||||||| | | |    
T  45278551 atatgcttttcatccctgtaattataggccgtttgatttttcatccctgaatttactaatccttccattttgcccctgtaattactaatcatttgaaagt 45278650  T
Q  264 tcgtccctctccccacttaatcactgccac 293  Q
    |||||||||| |||   |||||||||||||    
T  45278651 tcgtccctcttcccggataatcactgccac 45278680  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 157 - 257
Target Start/End: Complemental strand, 1757404 - 1757304
Alignment:
Q  157 ggcttacatatgcatttcattcctgcaattataggtcatttgatttttcatccatgagcttactaatcctcccattttacccttgtaaaaattaatcatt 256  Q
    |||||| |||||  |||||| |||| ||||||||| | ||||||||||||||||||| |||||||||||| ||||||| ||| |||||  | ||||||||    
T  1757404 ggcttaaatatgattttcatccctgtaattataggccgtttgatttttcatccatgaacttactaatccttccattttgcccctgtaattactaatcatt 1757305  T
Q  257 t 257  Q
    |    
T  1757304 t 1757304  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 243 - 301
Target Start/End: Original strand, 41988048 - 41988106
Alignment:
Q  243 aaaaattaatcatttaagatttcgtccctctccccacttaatcactgccacatcactaa 301  Q
    |||| |||||||||||| |||||||| |||||| |||||||||||||||||||||||||    
T  41988048 aaaatttaatcatttaaaatttcgtctctctcctcacttaatcactgccacatcactaa 41988106  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 248 - 298
Target Start/End: Complemental strand, 51994223 - 51994173
Alignment:
Q  248 ttaatcatttaagatttcgtccctctccccacttaatcactgccacatcac 298  Q
    |||||||||||| ||||||||||||||||||||||||||||||||| ||||    
T  51994223 ttaatcatttaaaatttcgtccctctccccacttaatcactgccacgtcac 51994173  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 248 - 293
Target Start/End: Original strand, 2796270 - 2796315
Alignment:
Q  248 ttaatcatttaagatttcgtccctctccccacttaatcactgccac 293  Q
    |||||||||||| |||||||||||||||||||||||||||||||||    
T  2796270 ttaatcatttaaaatttcgtccctctccccacttaatcactgccac 2796315  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 248 - 293
Target Start/End: Original strand, 8041707 - 8041752
Alignment:
Q  248 ttaatcatttaagatttcgtccctctccccacttaatcactgccac 293  Q
    |||||||||||| |||||||||||||||||||||||||||||||||    
T  8041707 ttaatcatttaaaatttcgtccctctccccacttaatcactgccac 8041752  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 248 - 293
Target Start/End: Complemental strand, 10770797 - 10770752
Alignment:
Q  248 ttaatcatttaagatttcgtccctctccccacttaatcactgccac 293  Q
    |||||||||||| |||||||||||||||||||||||||||||||||    
T  10770797 ttaatcatttaaaatttcgtccctctccccacttaatcactgccac 10770752  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 248 - 301
Target Start/End: Complemental strand, 26463935 - 26463882
Alignment:
Q  248 ttaatcatttaagatttcgtccctctccccacttaatcactgccacatcactaa 301  Q
    |||||||||||| ||||||||||||||||||||||||||||| ||| |||||||    
T  26463935 ttaatcatttaaaatttcgtccctctccccacttaatcactgtcacgtcactaa 26463882  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 248 - 301
Target Start/End: Complemental strand, 33156331 - 33156278
Alignment:
Q  248 ttaatcatttaagatttcgtccctctccccacttaatcactgccacatcactaa 301  Q
    |||||||||||| |||||||||||| |||||||||||||||||||| |||||||    
T  33156331 ttaatcatttaaaatttcgtccctccccccacttaatcactgccacgtcactaa 33156278  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 248 - 293
Target Start/End: Complemental strand, 36314604 - 36314559
Alignment:
Q  248 ttaatcatttaagatttcgtccctctccccacttaatcactgccac 293  Q
    |||||||||||| |||||||||||||||||||||||||||||||||    
T  36314604 ttaatcatttaaaatttcgtccctctccccacttaatcactgccac 36314559  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 248 - 301
Target Start/End: Original strand, 40758235 - 40758288
Alignment:
Q  248 ttaatcatttaagatttcgtccctctccccacttaatcactgccacatcactaa 301  Q
    |||||||||||| |||||||||||||||||||||||||||| |||| |||||||    
T  40758235 ttaatcatttaaaatttcgtccctctccccacttaatcactaccacgtcactaa 40758288  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 248 - 293
Target Start/End: Complemental strand, 48322683 - 48322638
Alignment:
Q  248 ttaatcatttaagatttcgtccctctccccacttaatcactgccac 293  Q
    |||||||||||| |||||||||||||||||||||||||||||||||    
T  48322683 ttaatcatttaaaatttcgtccctctccccacttaatcactgccac 48322638  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 248 - 293
Target Start/End: Original strand, 54466514 - 54466559
Alignment:
Q  248 ttaatcatttaagatttcgtccctctccccacttaatcactgccac 293  Q
    |||||||||||| |||||||||||||||||||||||||||||||||    
T  54466514 ttaatcatttaaaatttcgtccctctccccacttaatcactgccac 54466559  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 171 - 234
Target Start/End: Original strand, 44476063 - 44476126
Alignment:
Q  171 tttcattcctgcaattataggtcatttgatttttcatccatgagcttactaatcctcccatttt 234  Q
    |||||| |||| |||||| || ||||||||||||||||| ||| ||||||||||||||||||||    
T  44476063 tttcatccctgtaattatgggccatttgatttttcatccctgaacttactaatcctcccatttt 44476126  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 171 - 273
Target Start/End: Complemental strand, 43105920 - 43105818
Alignment:
Q  171 tttcattcctgcaattataggtcatttgatttttcatccatgagcttactaatcctcccattttacccttgtaaaaattaatcatttaagatttcgtccc 270  Q
    |||||| |||| ||||||||| | ||||||||||||||| ||| ||||||||||||  |||||| ||| |||||  | ||||||||| | | ||||||||    
T  43105920 tttcatccctgtaattataggccgtttgatttttcatccctgaacttactaatcctttcattttgcccctgtaattactaatcatttgaaagttcgtccc 43105821  T
Q  271 tct 273  Q
    |||    
T  43105820 tct 43105818  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 248 - 289
Target Start/End: Complemental strand, 9294295 - 9294254
Alignment:
Q  248 ttaatcatttaagatttcgtccctctccccacttaatcactg 289  Q
    |||||||||||| |||||||||||||||||||||||||||||    
T  9294295 ttaatcatttaaaatttcgtccctctccccacttaatcactg 9294254  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 248 - 293
Target Start/End: Complemental strand, 19741229 - 19741184
Alignment:
Q  248 ttaatcatttaagatttcgtccctctccccacttaatcactgccac 293  Q
    |||||||||||| |||||||| ||||||||||||||||||||||||    
T  19741229 ttaatcatttaaaatttcgtcactctccccacttaatcactgccac 19741184  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 248 - 292
Target Start/End: Original strand, 46474906 - 46474950
Alignment:
Q  248 ttaatcatttaagatttcgtccctctccccacttaatcactgcca 292  Q
    |||||||||||| |||| |||||||||||||||||||||||||||    
T  46474906 ttaatcatttaaaattttgtccctctccccacttaatcactgcca 46474950  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 247 - 301
Target Start/End: Original strand, 9367831 - 9367885
Alignment:
Q  247 attaatcatttaagatttcgtccctctccccacttaatcactgccacatcactaa 301  Q
    ||||||||||||| ||||||||||||  |||| |||||||||||||| |||||||    
T  9367831 attaatcatttaaaatttcgtccctcatcccaattaatcactgccacgtcactaa 9367885  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 171 - 257
Target Start/End: Complemental strand, 21255901 - 21255815
Alignment:
Q  171 tttcattcctgcaattataggtcatttgatttttcatccatgagcttactaatcctcccattttacccttgtaaaaattaatcattt 257  Q
    |||| ||||||||| ||||| |||||||| ||||| ||||| |  |||||||| || ||||||| || ||||||| |||||||||||    
T  21255901 tttcgttcctgcaaatatagatcatttgaattttcgtccataaagttactaatgcttccattttgccattgtaaatattaatcattt 21255815  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 243 - 301
Target Start/End: Original strand, 30380932 - 30380990
Alignment:
Q  243 aaaaattaatcatttaagatttcgtccctctccccacttaatcactgccacatcactaa 301  Q
    |||| |||||||||||| |||||||||||||  |||||| ||||||||||| |||||||    
T  30380932 aaaatttaatcatttaaaatttcgtccctctgtccacttgatcactgccacgtcactaa 30380990  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 243 - 301
Target Start/End: Complemental strand, 39399434 - 39399376
Alignment:
Q  243 aaaaattaatcatttaagatttcgtccctctccccacttaatcactgccacatcactaa 301  Q
    |||| |||||||||||| ||||| || ||||||||| |||||||||||||| |||||||    
T  39399434 aaaatttaatcatttaaaatttcatctctctccccagttaatcactgccacgtcactaa 39399376  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 248 - 294
Target Start/End: Complemental strand, 40033793 - 40033747
Alignment:
Q  248 ttaatcatttaagatttcgtccctctccccacttaatcactgccaca 294  Q
    |||||||||||| |||| |||||||||||||||||||||||| ||||    
T  40033793 ttaatcatttaaaattttgtccctctccccacttaatcactgtcaca 40033747  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 243 - 301
Target Start/End: Complemental strand, 54317973 - 54317915
Alignment:
Q  243 aaaaattaatcatttaagatttcgtccctctccccacttaatcactgccacatcactaa 301  Q
    |||| |||||||||||| |||||||| ||||||| | |||||||||||||| |||||||    
T  54317973 aaaatttaatcatttaaaatttcgtctctctccctaattaatcactgccacgtcactaa 54317915  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 195 - 292
Target Start/End: Original strand, 11025975 - 11026072
Alignment:
Q  195 tttgatttttcatccatgagcttactaatcctcccattttacccttgtaaaaattaatcatttaagatttcgtccctctccccacttaatcactgcca 292  Q
    ||||||||||||||| ||| |||||||||||| ||||||| ||  | |||  | ||||||||| | | ||||||||||| |||  |||||||||||||    
T  11025975 tttgatttttcatccctgaacttactaatccttccattttgcctctataattactaatcatttgaaagttcgtccctcttcccggttaatcactgcca 11026072  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 248 - 289
Target Start/End: Original strand, 43384374 - 43384415
Alignment:
Q  248 ttaatcatttaagatttcgtccctctccccacttaatcactg 289  Q
    |||||||||||| |||||||| ||||||||||||||||||||    
T  43384374 ttaatcatttaaaatttcgtctctctccccacttaatcactg 43384415  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 248 - 293
Target Start/End: Complemental strand, 55052585 - 55052540
Alignment:
Q  248 ttaatcatttaagatttcgtccctctccccacttaatcactgccac 293  Q
    |||||||||||| |||||||||||||||||| ||||||||| ||||    
T  55052585 ttaatcatttaaaatttcgtccctctccccatttaatcactaccac 55052540  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 157 - 257
Target Start/End: Original strand, 1741387 - 1741487
Alignment:
Q  157 ggcttacatatgcatttcattcctgcaattataggtcatttgatttttcatccatgagcttactaatcctcccattttacccttgtaaaaattaatcatt 256  Q
    |||||| |||||  |||| | ||||||| |||||||||||||| ||||| ||| |||  ||||||||||| ||| | | |||||| ||| ||||||||||    
T  1741387 ggcttaaatatgtctttcgtccctgcaaatataggtcatttgaattttcgtccctgaagttactaatccttccaatctgcccttgcaaatattaatcatt 1741486  T
Q  257 t 257  Q
    |    
T  1741487 t 1741487  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 243 - 301
Target Start/End: Complemental strand, 4521824 - 4521765
Alignment:
Q  243 aaaaattaatcatttaagatttcgtccctct-ccccacttaatcactgccacatcactaa 301  Q
    |||| ||||||| |||| ||||||||||||| |||||||||||||| |||| ||||||||    
T  4521824 aaaatttaatcacttaaaatttcgtccctctcccccacttaatcaccgccagatcactaa 4521765  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 243 - 298
Target Start/End: Complemental strand, 44654845 - 44654790
Alignment:
Q  243 aaaaattaatcatttaagatttcgtccctctccccacttaatcactgccacatcac 298  Q
    |||| ||||||| |||| |||||||||||||||||| |||||||||| ||| ||||    
T  44654845 aaaatttaatcacttaaaatttcgtccctctccccatttaatcactgtcacgtcac 44654790  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 243 - 301
Target Start/End: Complemental strand, 20704669 - 20704611
Alignment:
Q  243 aaaaattaatcatttaagatttcgtccctctccccacttaatcactgccacatcactaa 301  Q
    |||| ||||||| |||| ||||||||||||| ||||||||||||| | ||| |||||||    
T  20704669 aaaatttaatcacttaaaatttcgtccctcttcccacttaatcacagtcacgtcactaa 20704611  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 243 - 288
Target Start/End: Original strand, 20704516 - 20704561
Alignment:
Q  243 aaaaattaatcatttaagatttcgtccctctccccacttaatcact 288  Q
    |||| ||||||| |||| ||| ||||||||||||||||||||||||    
T  20704516 aaaatttaatcacttaaaattccgtccctctccccacttaatcact 20704561  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 171 - 224
Target Start/End: Original strand, 21300340 - 21300393
Alignment:
Q  171 tttcattcctgcaattataggtcatttgatttttcatccatgagcttactaatc 224  Q
    |||||| ||||||| |||||||||||||| ||||||||| |||  |||||||||    
T  21300340 tttcatccctgcaaatataggtcatttgaattttcatccctgaagttactaatc 21300393  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 248 - 289
Target Start/End: Complemental strand, 40506124 - 40506083
Alignment:
Q  248 ttaatcatttaagatttcgtccctctccccacttaatcactg 289  Q
    |||||||||||| |||||||| |||||| |||||||||||||    
T  40506124 ttaatcatttaaaatttcgtctctctccgcacttaatcactg 40506083  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #52
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 233 - 293
Target Start/End: Original strand, 42854511 - 42854569
Alignment:
Q  233 ttacccttgtaaaaattaatcatttaagatttcgtccctctccccacttaatcactgccac 293  Q
    ||||| ||| |||| |||||||||||| |||||||  ||||| ||||||||||||||||||    
T  42854511 ttacctttgcaaaatttaatcatttaaaatttcgt--ctctctccacttaatcactgccac 42854569  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #53
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 183 - 244
Target Start/End: Original strand, 43105259 - 43105320
Alignment:
Q  183 aattataggtcatttgatttttcatccatgagcttactaatcctcccattttacccttgtaa 244  Q
    ||||||||| | ||||||||||||||| ||| ||||||||||||  |||||| ||| |||||    
T  43105259 aattataggccgtttgatttttcatccctgaacttactaatcctttcattttgcccctgtaa 43105320  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #54
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 186 - 259
Target Start/End: Complemental strand, 46670610 - 46670537
Alignment:
Q  186 tataggtcatttgatttttcatccatgagcttactaatcctcccattttacccttgtaaaaattaatcatttaa 259  Q
    |||||||||||||| ||||||||| |||  |||||||| || |||||||  | ||| ||| |||||||||||||    
T  46670610 tataggtcatttgaattttcatccctgaagttactaattcttccattttgtcattgcaaatattaatcatttaa 46670537  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #55
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 178 - 259
Target Start/End: Original strand, 55036690 - 55036771
Alignment:
Q  178 cctgcaattataggtcatttgatttttcatccatgagcttactaatcctcccattttacccttgtaaaaattaatcatttaa 259  Q
    ||||||| |||||||||||||| ||||||| | |||  ||||||||||| ||| | | ||| || ||| |||||||||||||    
T  55036690 cctgcaaatataggtcatttgaattttcattcctgaagttactaatccttccaatctgcccctgcaaatattaatcatttaa 55036771  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #56
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 233 - 293
Target Start/End: Complemental strand, 21186047 - 21185987
Alignment:
Q  233 ttacccttgtaaaaattaatcatttaagatttcgtccctctccccacttaatcactgccac 293  Q
    ||||||||| |||  |||||||||||| |||||||||||   ||||||||||||| |||||    
T  21186047 ttacccttgcaaaccttaatcatttaaaatttcgtcccttgacccacttaatcaccgccac 21185987  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #57
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 201 - 257
Target Start/End: Original strand, 22735403 - 22735459
Alignment:
Q  201 ttttcatccatgagcttactaatcctcccattttacccttgtaaaaattaatcattt 257  Q
    ||||||||| | |||||||||||||||||||||| ||| |||||  | |||||||||    
T  22735403 ttttcatccctaagcttactaatcctcccattttgcccctgtaattactaatcattt 22735459  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #58
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 237 - 301
Target Start/End: Original strand, 23458059 - 23458123
Alignment:
Q  237 ccttgtaaaaattaatcatttaagatttcgtccctctccccacttaatcactgccacatcactaa 301  Q
    ||||| || |||||||||||||| ||||||||| |   || |||||||||||||||| |||||||    
T  23458059 ccttgcaataattaatcatttaaaatttcgtcctttgaccaacttaatcactgccacgtcactaa 23458123  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 76; Significance: 5e-35; HSPs: 66)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 76; E-Value: 5e-35
Query Start/End: Original strand, 158 - 257
Target Start/End: Original strand, 1231527 - 1231626
Alignment:
Q  158 gcttacatatgcatttcattcctgcaattataggtcatttgatttttcatccatgagcttactaatcctcccattttacccttgtaaaaattaatcattt 257  Q
    ||||| ||||||||||||| ||| |||||||||| | |||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||    
T  1231527 gcttaaatatgcatttcatccctacaattataggccctttgatttttcatccatgagcttactaatcctcccattttacccctgtaaaaattaatcattt 1231626  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 73; E-Value: 3e-33
Query Start/End: Original strand, 157 - 293
Target Start/End: Original strand, 34213764 - 34213900
Alignment:
Q  157 ggcttacatatgcatttcattcctgcaattataggtcatttgatttttcatccatgagcttactaatcctcccattttacccttgtaaaaattaatcatt 256  Q
    |||||| |||||| |||||| |||||||||||||| | ||||||||||||||| |||||||||||||||||| ||||| ||| ||||||| |||||||||    
T  34213764 ggcttaaatatgcttttcatccctgcaattataggccgtttgatttttcatccctgagcttactaatcctcctattttgcccctgtaaaagttaatcatt 34213863  T
Q  257 taagatttcgtccctctccccacttaatcactgccac 293  Q
    | | | ||||||||||| |||  ||||||||||||||    
T  34213864 tgaaagttcgtccctcttcccggttaatcactgccac 34213900  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 61; E-Value: 5e-26
Query Start/End: Original strand, 169 - 257
Target Start/End: Complemental strand, 7393233 - 7393145
Alignment:
Q  169 catttcattcctgcaattataggtcatttgatttttcatccatgagcttactaatcctcccattttacccttgtaaaaattaatcattt 257  Q
    |||||||| |||||||||||||||||||||||||||||||| ||| ||||||||||||||||||||| || || ||| |||||||||||    
T  7393233 catttcatccctgcaattataggtcatttgatttttcatccctgaacttactaatcctcccattttatccctgcaaatattaatcattt 7393145  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 61; E-Value: 5e-26
Query Start/End: Original strand, 157 - 257
Target Start/End: Complemental strand, 25288176 - 25288076
Alignment:
Q  157 ggcttacatatgcatttcattcctgcaattataggtcatttgatttttcatccatgagcttactaatcctcccattttacccttgtaaaaattaatcatt 256  Q
    |||||| |||||||||||||  ||||||||||||||||||||||||||||||| ||| ||||||||||||| |||||| ||| || ||| ||||||||||    
T  25288176 ggcttaaatatgcatttcatcactgcaattataggtcatttgatttttcatccctgaacttactaatcctctcattttgcccctgcaaatattaatcatt 25288077  T
Q  257 t 257  Q
    |    
T  25288076 t 25288076  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 61; E-Value: 5e-26
Query Start/End: Original strand, 157 - 257
Target Start/End: Original strand, 38598964 - 38599064
Alignment:
Q  157 ggcttacatatgcatttcattcctgcaattataggtcatttgatttttcatccatgagcttactaatcctcccattttacccttgtaaaaattaatcatt 256  Q
    |||||| ||||||||||||| |||||||||||||| ||||||||||||||||| ||| ||||||||||||| |||||| ||| || ||| ||||||||||    
T  38598964 ggcttaaatatgcatttcatccctgcaattataggccatttgatttttcatccctgaacttactaatcctctcattttgcccctgcaaatattaatcatt 38599063  T
Q  257 t 257  Q
    |    
T  38599064 t 38599064  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 157 - 234
Target Start/End: Complemental strand, 33497716 - 33497639
Alignment:
Q  157 ggcttacatatgcatttcattcctgcaattataggtcatttgatttttcatccatgagcttactaatcctcccatttt 234  Q
    |||||| |||||| |||||| |||| ||||||||| ||||||||||||||||||||||||||||||||||||||||||    
T  33497716 ggcttaaatatgcttttcatccctgtaattatagggcatttgatttttcatccatgagcttactaatcctcccatttt 33497639  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 157 - 257
Target Start/End: Complemental strand, 1232897 - 1232799
Alignment:
Q  157 ggcttacatatgcatttcattcctgcaattataggtcatttgatttttcatccatgagcttactaatcctcccattttacccttgtaaaaattaatcatt 256  Q
    |||||| ||||||||||||| |||| ||||||||| ||||||||||||||||| |||||||    ||||||||||||| ||| |||||||||||||||||    
T  1232897 ggcttaaatatgcatttcatccctgtaattataggccatttgatttttcatccctgagctt--gtatcctcccattttgcccctgtaaaaattaatcatt 1232800  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 157 - 293
Target Start/End: Original strand, 34665770 - 34665906
Alignment:
Q  157 ggcttacatatgcatttcattcctgcaattataggtcatttgatttttcatccatgagcttactaatcctcccattttacccttgtaaaaattaatcatt 256  Q
    |||||| |||||| |||||| |||| ||||||||| | ||||||||||||||| ||| |||||||||||| ||||||| ||| |||||  | ||||||||    
T  34665770 ggcttaaatatgcttttcatccctgtaattataggccgtttgatttttcatccctgaacttactaatccttccattttgcccctgtaattactaatcatt 34665869  T
Q  257 taagatttcgtccctctccccacttaatcactgccac 293  Q
    | | | ||||||||||| |||   |||||||||||||    
T  34665870 tgaaagttcgtccctcttcccggataatcactgccac 34665906  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 157 - 297
Target Start/End: Complemental strand, 34214629 - 34214488
Alignment:
Q  157 ggcttacatatgcatttcattcctgcaattataggtcatttgatttttca-tccatgagcttactaatcctcccattttacccttgtaaaaattaatcat 255  Q
    |||||| |||||| |||||| |||| ||||||||| | |||||||||||| ||| ||| |||||||||||| ||||||| ||| |||||  | |||||||    
T  34214629 ggcttaaatatgcttttcatccctgtaattataggccgtttgatttttcaatccctgaacttactaatccttccattttgcccctgtaattactaatcat 34214530  T
Q  256 ttaagatttcgtccctctccccacttaatcactgccacatca 297  Q
    || | | ||||||||||| |||   |||||||||||||||||    
T  34214529 ttgaaagttcgtccctcttcccgaataatcactgccacatca 34214488  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 155 - 257
Target Start/End: Original strand, 24377179 - 24377281
Alignment:
Q  155 ttggcttacatatgcatttcattcctgcaattataggtcatttgatttttcatccatgagcttactaatcctcccattttacccttgtaaaaattaatca 254  Q
    |||||| | ||||||||||||||| ||||||||  ||||||||||  |||||||| ||| |||||||||||||||||||| ||| || ||| ||||| ||    
T  24377179 ttggctaaaatatgcatttcattcttgcaattaggggtcatttgaagtttcatccctgaacttactaatcctcccatttttcccctgcaaatattaagca 24377278  T
Q  255 ttt 257  Q
    |||    
T  24377279 ttt 24377281  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 248 - 301
Target Start/End: Complemental strand, 16388863 - 16388810
Alignment:
Q  248 ttaatcatttaagatttcgtccctctccccacttaatcactgccacatcactaa 301  Q
    |||||||||||| ||||||||||||||||||||||||||||||||| |||||||    
T  16388863 ttaatcatttaaaatttcgtccctctccccacttaatcactgccacgtcactaa 16388810  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 248 - 301
Target Start/End: Original strand, 36928567 - 36928620
Alignment:
Q  248 ttaatcatttaagatttcgtccctctccccacttaatcactgccacatcactaa 301  Q
    |||||||||||| ||||||||||||||||||||||||||||||||| |||||||    
T  36928567 ttaatcatttaaaatttcgtccctctccccacttaatcactgccacgtcactaa 36928620  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 249 - 301
Target Start/End: Complemental strand, 31608849 - 31608797
Alignment:
Q  249 taatcatttaagatttcgtccctctccccacttaatcactgccacatcactaa 301  Q
    ||||||||||| ||||||||||||||||||||||||||||||||| |||||||    
T  31608849 taatcatttaaaatttcgtccctctccccacttaatcactgccacgtcactaa 31608797  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 164 - 234
Target Start/End: Complemental strand, 24379089 - 24379019
Alignment:
Q  164 atatgcatttcattcctgcaattataggtcatttgatttttcatccatgagcttactaatcctcccatttt 234  Q
    ||||||||||||| ||||||||||  ||||||||||| |||||||| ||| |||||||||||||| |||||    
T  24379089 atatgcatttcatccctgcaattaggggtcatttgatatttcatccttgaacttactaatcctcctatttt 24379019  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 171 - 241
Target Start/End: Original strand, 33497030 - 33497100
Alignment:
Q  171 tttcattcctgcaattataggtcatttgatttttcatccatgagcttactaatcctcccattttacccttg 241  Q
    |||||||| || ||||||||||||||||||||||||| | ||| |||||||||||| ||||||| ||||||    
T  33497030 tttcattcatgtaattataggtcatttgatttttcattcttgaacttactaatccttccattttgcccttg 33497100  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 248 - 294
Target Start/End: Original strand, 38862709 - 38862755
Alignment:
Q  248 ttaatcatttaagatttcgtccctctccccacttaatcactgccaca 294  Q
    |||||||||||| ||||||||||||||||||||||||||||||||||    
T  38862709 ttaatcatttaaaatttcgtccctctccccacttaatcactgccaca 38862755  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 248 - 293
Target Start/End: Complemental strand, 1425359 - 1425314
Alignment:
Q  248 ttaatcatttaagatttcgtccctctccccacttaatcactgccac 293  Q
    |||||||||||| |||||||||||||||||||||||||||||||||    
T  1425359 ttaatcatttaaaatttcgtccctctccccacttaatcactgccac 1425314  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 248 - 293
Target Start/End: Complemental strand, 3041762 - 3041717
Alignment:
Q  248 ttaatcatttaagatttcgtccctctccccacttaatcactgccac 293  Q
    |||||||||||| |||||||||||||||||||||||||||||||||    
T  3041762 ttaatcatttaaaatttcgtccctctccccacttaatcactgccac 3041717  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 164 - 257
Target Start/End: Original strand, 4970132 - 4970225
Alignment:
Q  164 atatgcatttcattcctgcaattataggtcatttgatttttcatccatgagcttactaatcctcccattttacccttgtaaaaattaatcattt 257  Q
    ||||||||||||| ||||||||||  ||||||||||  |||||||| ||| |||||||||||| ||||||| ||| || ||| ||||| |||||    
T  4970132 atatgcatttcatccctgcaattaggggtcatttgaaatttcatccctgaacttactaatccttccattttgcccctgcaaatattaagcattt 4970225  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 248 - 301
Target Start/End: Original strand, 13186151 - 13186204
Alignment:
Q  248 ttaatcatttaagatttcgtccctctccccacttaatcactgccacatcactaa 301  Q
    |||||||||||| |||||||| |||||||||||||||||||||||| |||||||    
T  13186151 ttaatcatttaaaatttcgtctctctccccacttaatcactgccacgtcactaa 13186204  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 248 - 293
Target Start/End: Complemental strand, 23663851 - 23663806
Alignment:
Q  248 ttaatcatttaagatttcgtccctctccccacttaatcactgccac 293  Q
    |||||||||||| |||||||||||||||||||||||||||||||||    
T  23663851 ttaatcatttaaaatttcgtccctctccccacttaatcactgccac 23663806  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 248 - 301
Target Start/End: Original strand, 35756673 - 35756726
Alignment:
Q  248 ttaatcatttaagatttcgtccctctccccacttaatcactgccacatcactaa 301  Q
    |||||||||||| ||||||||||||||||||||||||||||||||  |||||||    
T  35756673 ttaatcatttaaaatttcgtccctctccccacttaatcactgccatgtcactaa 35756726  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 248 - 301
Target Start/End: Complemental strand, 36186404 - 36186351
Alignment:
Q  248 ttaatcatttaagatttcgtccctctccccacttaatcactgccacatcactaa 301  Q
    |||||||||||| |||||||||||||||| |||||||||||||||||| |||||    
T  36186404 ttaatcatttaaaatttcgtccctctccctacttaatcactgccacattactaa 36186351  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 248 - 293
Target Start/End: Original strand, 36325325 - 36325370
Alignment:
Q  248 ttaatcatttaagatttcgtccctctccccacttaatcactgccac 293  Q
    |||||||||||| |||||||||||||||||||||||||||||||||    
T  36325325 ttaatcatttaaaatttcgtccctctccccacttaatcactgccac 36325370  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 248 - 293
Target Start/End: Complemental strand, 38845605 - 38845560
Alignment:
Q  248 ttaatcatttaagatttcgtccctctccccacttaatcactgccac 293  Q
    |||||||||||| |||||||||||||||||||||||||||||||||    
T  38845605 ttaatcatttaaaatttcgtccctctccccacttaatcactgccac 38845560  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 248 - 301
Target Start/End: Original strand, 39071767 - 39071820
Alignment:
Q  248 ttaatcatttaagatttcgtccctctccccacttaatcactgccacatcactaa 301  Q
    |||||||||||| ||||||||||||||||||||||||||||||| | |||||||    
T  39071767 ttaatcatttaaaatttcgtccctctccccacttaatcactgccgcgtcactaa 39071820  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 248 - 293
Target Start/End: Complemental strand, 40775956 - 40775911
Alignment:
Q  248 ttaatcatttaagatttcgtccctctccccacttaatcactgccac 293  Q
    |||||||||||| |||||||||||||||||||||||||||||||||    
T  40775956 ttaatcatttaaaatttcgtccctctccccacttaatcactgccac 40775911  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 248 - 293
Target Start/End: Complemental strand, 44407163 - 44407118
Alignment:
Q  248 ttaatcatttaagatttcgtccctctccccacttaatcactgccac 293  Q
    |||||||||||| |||||||||||||||||||||||||||||||||    
T  44407163 ttaatcatttaaaatttcgtccctctccccacttaatcactgccac 44407118  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 157 - 228
Target Start/End: Complemental strand, 4463526 - 4463455
Alignment:
Q  157 ggcttacatatgcatttcattcctgcaattataggtcatttgatttttcatccatgagcttactaatcctcc 228  Q
    |||||| ||||||||||||| ||||||| |||||| |||||||  |||||||| ||| ||||||||||||||    
T  4463526 ggcttaaatatgcatttcatccctgcaagtataggccatttgaaatttcatccctgaacttactaatcctcc 4463455  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 247 - 294
Target Start/End: Complemental strand, 12199257 - 12199210
Alignment:
Q  247 attaatcatttaagatttcgtccctctccccacttaatcactgccaca 294  Q
    ||||||||||||| |||||||| |||||||||||||||||||||||||    
T  12199257 attaatcatttaaaatttcgtctctctccccacttaatcactgccaca 12199210  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 247 - 294
Target Start/End: Complemental strand, 12443685 - 12443638
Alignment:
Q  247 attaatcatttaagatttcgtccctctccccacttaatcactgccaca 294  Q
    ||||||||||||| |||||||| |||||||||||||||||||||||||    
T  12443685 attaatcatttaaaatttcgtctctctccccacttaatcactgccaca 12443638  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 164 - 234
Target Start/End: Original strand, 29574749 - 29574819
Alignment:
Q  164 atatgcatttcattcctgcaattataggtcatttgatttttcatccatgagcttactaatcctcccatttt 234  Q
    ||||||||||||| ||||||| ||||||||||||||  |||||||| | | |||||||||||| |||||||    
T  29574749 atatgcatttcatccctgcaaatataggtcatttgaaatttcatccctaaacttactaatccttccatttt 29574819  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 183 - 293
Target Start/End: Complemental strand, 34666614 - 34666505
Alignment:
Q  183 aattataggtcatttgatttttcatccatgagcttactaatcctcccattttacccttgtaaaaattaatcatttaagatttcgtccctctccccactta 282  Q
    ||||||||| | ||||||||||||||| ||| |||||||||||| ||||||| ||| |||||  | ||||||||| | | ||||||||||| |||   ||    
T  34666614 aattataggccgtttgatttttcatccctgaacttactaatccttccattttgccc-tgtaattactaatcatttgaaagttcgtccctcttcccggata 34666516  T
Q  283 atcactgccac 293  Q
    |||||||||||    
T  34666515 atcactgccac 34666505  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 248 - 293
Target Start/End: Original strand, 2266583 - 2266628
Alignment:
Q  248 ttaatcatttaagatttcgtccctctccccacttaatcactgccac 293  Q
    |||||| ||||| |||||||||||||||||||||||||||||||||    
T  2266583 ttaatcgtttaaaatttcgtccctctccccacttaatcactgccac 2266628  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 248 - 301
Target Start/End: Complemental strand, 4405997 - 4405944
Alignment:
Q  248 ttaatcatttaagatttcgtccctctccccacttaatcactgccacatcactaa 301  Q
    |||||||||||| ||||||||||||| ||||||||||||||| ||| |||||||    
T  4405997 ttaatcatttaaaatttcgtccctcttcccacttaatcactgtcacgtcactaa 4405944  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 248 - 293
Target Start/End: Complemental strand, 8316925 - 8316880
Alignment:
Q  248 ttaatcatttaagatttcgtccctctccccacttaatcactgccac 293  Q
    |||||||||||| ||||||||| |||||||||||||||||||||||    
T  8316925 ttaatcatttaaaatttcgtccatctccccacttaatcactgccac 8316880  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 248 - 293
Target Start/End: Complemental strand, 22915695 - 22915650
Alignment:
Q  248 ttaatcatttaagatttcgtccctctccccacttaatcactgccac 293  Q
    |||||||||||| ||| |||||||||||||||||||||||||||||    
T  22915695 ttaatcatttaaaattccgtccctctccccacttaatcactgccac 22915650  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 248 - 289
Target Start/End: Complemental strand, 23698581 - 23698540
Alignment:
Q  248 ttaatcatttaagatttcgtccctctccccacttaatcactg 289  Q
    |||||||||||| |||||||||||||||||||||||||||||    
T  23698581 ttaatcatttaaaatttcgtccctctccccacttaatcactg 23698540  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 248 - 292
Target Start/End: Complemental strand, 35449915 - 35449871
Alignment:
Q  248 ttaatcatttaagatttcgtccctctccccacttaatcactgcca 292  Q
    |||||||||||| |||||||||||||||||| |||||||||||||    
T  35449915 ttaatcatttaaaatttcgtccctctccccatttaatcactgcca 35449871  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 248 - 291
Target Start/End: Complemental strand, 12273190 - 12273147
Alignment:
Q  248 ttaatcatttaagatttcgtccctctccccacttaatcactgcc 291  Q
    |||||||||||| ||||||||||||| |||||||||||||||||    
T  12273190 ttaatcatttaaaatttcgtccctcttcccacttaatcactgcc 12273147  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 199 - 257
Target Start/End: Original strand, 7392250 - 7392308
Alignment:
Q  199 atttttcatccatgagcttactaatcctcccattttacccttgtaaaaattaatcattt 257  Q
    ||||||||||| ||| ||||||||||||||||||||| || || ||| |||||||||||    
T  7392250 atttttcatccctgaacttactaatcctcccattttatccctgcaaatattaatcattt 7392308  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #42
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 154 - 224
Target Start/End: Original strand, 27436560 - 27436630
Alignment:
Q  154 attggcttacatatgcatttcattcctgcaattataggtcatttgatttttcatccatgagcttactaatc 224  Q
    ||||||||| ||||||||||||| ||||||| |||||||| ||||| ||||| ||| |||  |||||||||    
T  27436560 attggcttaaatatgcatttcatccctgcaaatataggtcgtttgaattttcgtccctgaagttactaatc 27436630  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #43
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 243 - 301
Target Start/End: Complemental strand, 31873241 - 31873183
Alignment:
Q  243 aaaaattaatcatttaagatttcgtccctctccccacttaatcactgccacatcactaa 301  Q
    |||| |||||||||||| |||| || ||||| |||||||||||||||| ||||||||||    
T  31873241 aaaatttaatcatttaaaattttgttcctcttcccacttaatcactgctacatcactaa 31873183  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #44
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 248 - 294
Target Start/End: Original strand, 38955794 - 38955840
Alignment:
Q  248 ttaatcatttaagatttcgtccctctccccacttaatcactgccaca 294  Q
    |||||||||||| ||||| ||||||||| ||||||||||||||||||    
T  38955794 ttaatcatttaaaatttcatccctctcctcacttaatcactgccaca 38955840  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #45
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 248 - 297
Target Start/End: Original strand, 2534786 - 2534835
Alignment:
Q  248 ttaatcatttaagatttcgtccctctccccacttaatcactgccacatca 297  Q
    |||||||||||| ||||||||||| | |||| ||||||||||||||||||    
T  2534786 ttaatcatttaaaatttcgtccctattcccagttaatcactgccacatca 2534835  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #46
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 248 - 293
Target Start/End: Original strand, 11674786 - 11674830
Alignment:
Q  248 ttaatcatttaagatttcgtccctctccccacttaatcactgccac 293  Q
    |||||||||||| ||||||||||||| |||||||||||||||||||    
T  11674786 ttaatcatttaaaatttcgtccctct-cccacttaatcactgccac 11674830  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #47
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 248 - 301
Target Start/End: Complemental strand, 40318301 - 40318248
Alignment:
Q  248 ttaatcatttaagatttcgtccctctccccacttaatcactgccacatcactaa 301  Q
    |||||||||||| ||||||||| ||||| ||||||||||||||||  |||||||    
T  40318301 ttaatcatttaaaatttcgtccttctcctcacttaatcactgccatgtcactaa 40318248  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #48
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 233 - 293
Target Start/End: Complemental strand, 8747616 - 8747556
Alignment:
Q  233 ttacccttgtaaaaattaatcatttaagatttcgtccctctccccacttaatcactgccac 293  Q
    ||||||||| ||| ||||||||||||| |||||||||||   ||||||||||||| |||||    
T  8747616 ttacccttgcaaacattaatcatttaaaatttcgtcccttaacccacttaatcaccgccac 8747556  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #49
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 249 - 301
Target Start/End: Complemental strand, 22890330 - 22890278
Alignment:
Q  249 taatcatttaagatttcgtccctctccccacttaatcactgccacatcactaa 301  Q
    |||||| |||| |||| |||||||| ||||||||||||||| |||||||||||    
T  22890330 taatcacttaaaattttgtccctcttcccacttaatcactgtcacatcactaa 22890278  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #50
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 243 - 301
Target Start/End: Complemental strand, 11291253 - 11291195
Alignment:
Q  243 aaaaattaatcatttaagatttcgtccctctccccacttaatcactgccacatcactaa 301  Q
    |||| ||||||| |||| |||| ||  |||||| |||||||||||||||||||||||||    
T  11291253 aaaatttaatcacttaaaattttgtatctctcctcacttaatcactgccacatcactaa 11291195  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #51
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 243 - 301
Target Start/End: Original strand, 24085860 - 24085918
Alignment:
Q  243 aaaaattaatcatttaagatttcgtccctctccccacttaatcactgccacatcactaa 301  Q
    |||| ||||||  |||| |||| |||||||||||||||||||||||| ||| |||||||    
T  24085860 aaaatttaatcgcttaaaattttgtccctctccccacttaatcactgtcacgtcactaa 24085918  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #52
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 164 - 230
Target Start/End: Original strand, 36574824 - 36574890
Alignment:
Q  164 atatgcatttcattcctgcaattataggtcatttgatttttcatccatgagcttactaatcctccca 230  Q
    |||||||||||||  |||||  |||||| |||||||  |||||||| ||| ||||||||||||||||    
T  36574824 atatgcatttcatctctgcatatatagggcatttgaaatttcatccctgaacttactaatcctccca 36574890  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #53
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 171 - 224
Target Start/End: Original strand, 547642 - 547695
Alignment:
Q  171 tttcattcctgcaattataggtcatttgatttttcatccatgagcttactaatc 224  Q
    |||||| |||||||||||||||||||||| ||||| ||| |||  |||||||||    
T  547642 tttcatccctgcaattataggtcatttgaattttcgtccttgaagttactaatc 547695  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #54
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 248 - 297
Target Start/End: Complemental strand, 2535887 - 2535838
Alignment:
Q  248 ttaatcatttaagatttcgtccctctccccacttaatcactgccacatca 297  Q
    |||||||||||| |||||||||||   |||||||||| ||||||||||||    
T  2535887 ttaatcatttaaaatttcgtcccttgacccacttaatgactgccacatca 2535838  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #55
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 248 - 285
Target Start/End: Complemental strand, 4994994 - 4994957
Alignment:
Q  248 ttaatcatttaagatttcgtccctctccccacttaatc 285  Q
    |||||||||| | |||||||||||||||||||||||||    
T  4994994 ttaatcatttcaaatttcgtccctctccccacttaatc 4994957  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #56
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 180 - 257
Target Start/End: Original strand, 9632351 - 9632428
Alignment:
Q  180 tgcaattataggtcatttgatttttcatccatgagcttactaatcctcccattttacccttgtaaaaattaatcattt 257  Q
    ||||| |||||||||||||| ||||| ||| |||  ||||||||||| |||||||  | ||| ||| |||||||||||    
T  9632351 tgcaaatataggtcatttgaattttcgtccctgaagttactaatccttccattttgtcattgcaaatattaatcattt 9632428  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #57
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 155 - 224
Target Start/End: Complemental strand, 27437621 - 27437552
Alignment:
Q  155 ttggcttacatatgcatttcattcctgcaattataggtcatttgatttttcatccatgagcttactaatc 224  Q
    |||||||| ||||||||||||| ||||||| |||||| | ||||| ||||| ||| |||  |||||||||    
T  27437621 ttggcttaaatatgcatttcatccctgcaaatataggccgtttgaattttcgtccctgaagttactaatc 27437552  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #58
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 248 - 297
Target Start/End: Complemental strand, 34177307 - 34177258
Alignment:
Q  248 ttaatcatttaagatttcgtccctctccccacttaatcactgccacatca 297  Q
    |||||||||||| |||||||||||   |||||||||| ||||||||||||    
T  34177307 ttaatcatttaaaatttcgtcccttgacccacttaatgactgccacatca 34177258  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #59
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 171 - 224
Target Start/End: Original strand, 36623560 - 36623613
Alignment:
Q  171 tttcattcctgcaattataggtcatttgatttttcatccatgagcttactaatc 224  Q
    |||||| ||||||| |||||||||||||| ||||||||| |||  |||||||||    
T  36623560 tttcatccctgcaaatataggtcatttgaattttcatccctgaagttactaatc 36623613  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #60
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 171 - 224
Target Start/End: Original strand, 37342989 - 37343042
Alignment:
Q  171 tttcattcctgcaattataggtcatttgatttttcatccatgagcttactaatc 224  Q
    |||||| ||||||| |||||||||||||| ||||||||| |||  |||||||||    
T  37342989 tttcatccctgcaaatataggtcatttgaattttcatccctgaagttactaatc 37343042  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #61
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 171 - 224
Target Start/End: Complemental strand, 43866888 - 43866835
Alignment:
Q  171 tttcattcctgcaattataggtcatttgatttttcatccatgagcttactaatc 224  Q
    |||||| ||||||| |||||||||||||| ||||||||| |||  |||||||||    
T  43866888 tttcatccctgcaaatataggtcatttgaattttcatccctgaagttactaatc 43866835  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #62
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 220 - 300
Target Start/End: Complemental strand, 9499962 - 9499883
Alignment:
Q  220 taatcctcccattttacccttgtaaaaattaatcatttaagatttcgtccctctccccacttaatcactgccacatcacta 300  Q
    |||||||  |||||||||||   |||| |||||||||||| ||||  |||||| |||||||||||||||| ||| ||||||    
T  9499962 taatcctgacattttaccctcccaaaatttaatcatttaaaatttgatccctc-ccccacttaatcactgtcacgtcacta 9499883  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #63
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 178 - 226
Target Start/End: Complemental strand, 26740081 - 26740033
Alignment:
Q  178 cctgcaattataggtcatttgatttttcatccatgagcttactaatcct 226  Q
    ||||||| |||||||||||||| ||||| |||||||  |||||||||||    
T  26740081 cctgcaaatataggtcatttgaattttcgtccatgaagttactaatcct 26740033  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #64
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 164 - 232
Target Start/End: Complemental strand, 29575978 - 29575910
Alignment:
Q  164 atatgcatttcattcctgcaattataggtcatttgatttttcatccatgagcttactaatcctcccatt 232  Q
    ||||||||||||| ||||||| |||||  |||||||  |||||||| | |  |||||||||||||||||    
T  29575978 atatgcatttcatccctgcaaatatagtccatttgaaatttcatccctaaatttactaatcctcccatt 29575910  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #65
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 247 - 299
Target Start/End: Complemental strand, 30712055 - 30712003
Alignment:
Q  247 attaatcatttaagatttcgtccctctccccacttaatcactgccacatcact 299  Q
    ||||||||||||| |||||||||||   |||| ||||| ||||||||||||||    
T  30712055 attaatcatttaaaatttcgtccctgaacccagttaattactgccacatcact 30712003  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #66
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 247 - 299
Target Start/End: Complemental strand, 30719832 - 30719780
Alignment:
Q  247 attaatcatttaagatttcgtccctctccccacttaatcactgccacatcact 299  Q
    ||||||||||||| |||||||||||   |||| ||||| ||||||||||||||    
T  30719832 attaatcatttaaaatttcgtccctgaacccagttaattactgccacatcact 30719780  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0009 (Bit Score: 69; Significance: 8e-31; HSPs: 2)
Name: scaffold0009
Description:

Target: scaffold0009; HSP #1
Raw Score: 69; E-Value: 8e-31
Query Start/End: Original strand, 157 - 257
Target Start/End: Original strand, 261001 - 261101
Alignment:
Q  157 ggcttacatatgcatttcattcctgcaattataggtcatttgatttttcatccatgagcttactaatcctcccattttacccttgtaaaaattaatcatt 256  Q
    |||||| ||||||||||||| ||||||||||||||||||||||||||||||||||||  ||||||||||||||||||| ||| || ||| ||||||||||    
T  261001 ggcttaaatatgcatttcatccctgcaattataggtcatttgatttttcatccatgaatttactaatcctcccattttgcccctgcaaatattaatcatt 261100  T
Q  257 t 257  Q
    |    
T  261101 t 261101  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0009; HSP #2
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 157 - 259
Target Start/End: Complemental strand, 262541 - 262439
Alignment:
Q  157 ggcttacatatgcatttcattcctgcaattataggtcatttgatttttcatccatgagcttactaatcctcccattttacccttgtaaaaattaatcatt 256  Q
    |||||| ||||||||||||| |||| ||||||||||||||||||||||||||| ||| |||||||||||||||||||| ||| || ||| ||||||||||    
T  262541 ggcttaaatatgcatttcatccctgtaattataggtcatttgatttttcatccctgaacttactaatcctcccatttttcccctgcaaatattaatcatt 262442  T
Q  257 taa 259  Q
    |||    
T  262441 taa 262439  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 69; Significance: 8e-31; HSPs: 35)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 69; E-Value: 8e-31
Query Start/End: Original strand, 157 - 297
Target Start/End: Complemental strand, 4117647 - 4117507
Alignment:
Q  157 ggcttacatatgcatttcattcctgcaattataggtcatttgatttttcatccatgagcttactaatcctcccattttacccttgtaaaaattaatcatt 256  Q
    |||||| |||||  |||||| |||| ||||||||| | ||||||||||||||| |||||||||||||||||||||||| ||| ||||||| |||||||||    
T  4117647 ggcttaaatatgtttttcatccctgtaattataggccgtttgatttttcatccctgagcttactaatcctcccattttgcccctgtaaaagttaatcatt 4117548  T
Q  257 taagatttcgtccctctccccacttaatcactgccacatca 297  Q
    | | | ||||||||||| | |  ||||||||||||||||||    
T  4117547 tgaaaattcgtccctcttctcggttaatcactgccacatca 4117507  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 157 - 292
Target Start/End: Original strand, 14656480 - 14656615
Alignment:
Q  157 ggcttacatatgcatttcattcctgcaattataggtcatttgatttttcatccatgagcttactaatcctcccattttacccttgtaaaaattaatcatt 256  Q
    |||||| |||||| |||||| ||||||||||||||   ||||||||||||||| |||||||||||||||||| ||||| ||| ||||||| |||||||||    
T  14656480 ggcttaaatatgcttttcatccctgcaattataggctgtttgatttttcatccctgagcttactaatcctcctattttgcccctgtaaaagttaatcatt 14656579  T
Q  257 taagatttcgtccctctccccacttaatcactgcca 292  Q
    | | | ||||||||||| |||  |||||||||||||    
T  14656580 tgaaagttcgtccctcttcccggttaatcactgcca 14656615  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 157 - 295
Target Start/End: Original strand, 4116799 - 4116937
Alignment:
Q  157 ggcttacatatgcatttcattcctgcaattataggtcatttgatttttcatccatgagcttactaatcctcccattttacccttgtaaaaattaatcatt 256  Q
    |||||| |||||  |||||| |||| ||||||||| | ||||||||||||||| |||||||||||||||||||||||| ||| ||||||| |||||||||    
T  4116799 ggcttaaatatgtttttcatccctgtaattataggccgtttgatttttcatccctgagcttactaatcctcccattttgcccctgtaaaagttaatcatt 4116898  T
Q  257 taagatttcgtccctctccccacttaatcactgccacat 295  Q
    | | | ||||||||||| | |  ||||||||||||||||    
T  4116899 tgaaaattcgtccctcttctcggttaatcactgccacat 4116937  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 61; E-Value: 5e-26
Query Start/End: Original strand, 157 - 257
Target Start/End: Complemental strand, 17784485 - 17784385
Alignment:
Q  157 ggcttacatatgcatttcattcctgcaattataggtcatttgatttttcatccatgagcttactaatcctcccattttacccttgtaaaaattaatcatt 256  Q
    |||||| |||||| |||||| |||||||| ||||| ||||||||||||||||||||| |||||||||||||||||||| ||| || ||| ||||||||||    
T  17784485 ggcttaaatatgcttttcatccctgcaatgataggccatttgatttttcatccatgaacttactaatcctcccattttgcccctgcaaatattaatcatt 17784386  T
Q  257 t 257  Q
    |    
T  17784385 t 17784385  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 61; E-Value: 5e-26
Query Start/End: Original strand, 157 - 257
Target Start/End: Complemental strand, 33401226 - 33401126
Alignment:
Q  157 ggcttacatatgcatttcattcctgcaattataggtcatttgatttttcatccatgagcttactaatcctcccattttacccttgtaaaaattaatcatt 256  Q
    |||||| |||||| |||||| |||||||||||||| | ||||||||||||||| ||| |||||||||||||||||||| ||| ||||||| |||||||||    
T  33401226 ggcttaaatatgcttttcatccctgcaattataggccgtttgatttttcatccctgaacttactaatcctcccattttgcccctgtaaaagttaatcatt 33401127  T
Q  257 t 257  Q
    |    
T  33401126 t 33401126  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 164 - 234
Target Start/End: Complemental strand, 8427458 - 8427388
Alignment:
Q  164 atatgcatttcattcctgcaattataggtcatttgatttttcatccatgagcttactaatcctcccatttt 234  Q
    ||||||||||||| |||||||||||||||||||||||||||||||| ||  ||||||||||||||||||||    
T  8427458 atatgcatttcatccctgcaattataggtcatttgatttttcatccctggacttactaatcctcccatttt 8427388  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 155 - 293
Target Start/End: Original strand, 33399964 - 33400102
Alignment:
Q  155 ttggcttacatatgcatttcattcctgcaattataggtcatttgatttttcatccatgagcttactaatcctcccattttacccttgtaaaaattaatca 254  Q
    |||||||| |||||| |||||| |||| ||||||||| | ||||||||||||||| ||| |||||||||||| ||||||| ||| |||||  | ||||||    
T  33399964 ttggcttaaatatgcttttcatccctgtaattataggccgtttgatttttcatccctgaacttactaatccttccattttgcccctgtaattactaatca 33400063  T
Q  255 tttaagatttcgtccctctccccacttaatcactgccac 293  Q
    ||| | | ||||||||||| |||   |||||||||||||    
T  33400064 tttgaaagttcgtccctcttcccggataatcactgccac 33400102  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 171 - 273
Target Start/End: Complemental strand, 1661516 - 1661414
Alignment:
Q  171 tttcattcctgcaattataggtcatttgatttttcatccatgagcttactaatcctcccattttacccttgtaaaaattaatcatttaagatttcgtccc 270  Q
    |||||| |||| ||||||||| | ||||||||||||||| ||| |||||||||||| ||||||||||| |||||  | ||||||||| | | ||||||||    
T  1661516 tttcatccctgtaattataggccgtttgatttttcatccctgaacttactaatccttccattttacccctgtaattactaatcatttgaaagttcgtccc 1661417  T
Q  271 tct 273  Q
    |||    
T  1661416 tct 1661414  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 157 - 293
Target Start/End: Complemental strand, 14657309 - 14657173
Alignment:
Q  157 ggcttacatatgcatttcattcctgcaattataggtcatttgatttttcatccatgagcttactaatcctcccattttacccttgtaaaaattaatcatt 256  Q
    |||||| |||||| |||||| |||  ||||||||| | |||||||||| |||| ||| |||||||||||| ||||||| ||| |||||  | ||||||||    
T  14657309 ggcttaaatatgcttttcatccctataattataggccgtttgattttttatccctgaccttactaatccttccattttgcccctgtaattactaatcatt 14657210  T
Q  257 taagatttcgtccctctccccacttaatcactgccac 293  Q
    | | | ||||||||||| |||   |||||||||||||    
T  14657209 tgaaagttcgtccctcttcccggataatcactgccac 14657173  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 248 - 301
Target Start/End: Original strand, 12080727 - 12080780
Alignment:
Q  248 ttaatcatttaagatttcgtccctctccccacttaatcactgccacatcactaa 301  Q
    |||||||||||| ||||||||||||||||||||||||||||||||  |||||||    
T  12080727 ttaatcatttaaaatttcgtccctctccccacttaatcactgccatgtcactaa 12080780  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 248 - 301
Target Start/End: Complemental strand, 21628050 - 21627997
Alignment:
Q  248 ttaatcatttaagatttcgtccctctccccacttaatcactgccacatcactaa 301  Q
    |||||||||||| |||| |||||||||||||||||||||||||||| |||||||    
T  21628050 ttaatcatttaaaattttgtccctctccccacttaatcactgccacgtcactaa 21627997  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 248 - 293
Target Start/End: Complemental strand, 28000691 - 28000646
Alignment:
Q  248 ttaatcatttaagatttcgtccctctccccacttaatcactgccac 293  Q
    |||||||||||| |||||||||||||||||||||||||||||||||    
T  28000691 ttaatcatttaaaatttcgtccctctccccacttaatcactgccac 28000646  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 248 - 293
Target Start/End: Original strand, 30337540 - 30337585
Alignment:
Q  248 ttaatcatttaagatttcgtccctctccccacttaatcactgccac 293  Q
    |||||||||||| |||||||||||||||||||||||||||||||||    
T  30337540 ttaatcatttaaaatttcgtccctctccccacttaatcactgccac 30337585  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 248 - 301
Target Start/End: Original strand, 30803952 - 30804005
Alignment:
Q  248 ttaatcatttaagatttcgtccctctccccacttaatcactgccacatcactaa 301  Q
    |||||||||||| ||||||||||||||||||||||||||||||||  |||||||    
T  30803952 ttaatcatttaaaatttcgtccctctccccacttaatcactgccatctcactaa 30804005  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 248 - 301
Target Start/End: Original strand, 33517625 - 33517678
Alignment:
Q  248 ttaatcatttaagatttcgtccctctccccacttaatcactgccacatcactaa 301  Q
    |||||||||||| |||||||||||||||||||||||||||||| || |||||||    
T  33517625 ttaatcatttaaaatttcgtccctctccccacttaatcactgctacgtcactaa 33517678  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 243 - 301
Target Start/End: Complemental strand, 1215208 - 1215150
Alignment:
Q  243 aaaaattaatcatttaagatttcgtccctctccccacttaatcactgccacatcactaa 301  Q
    |||| ||||||| |||| ||||||||||| ||||||||||||||||||||| |||||||    
T  1215208 aaaatttaatcacttaaaatttcgtccctatccccacttaatcactgccacgtcactaa 1215150  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 219 - 301
Target Start/End: Original strand, 30725821 - 30725903
Alignment:
Q  219 ctaatcctcccattttacccttgtaaaaattaatcatttaagatttcgtccctctccccacttaatcactgccacatcactaa 301  Q
    |||||||| ||| |||||||||| |    |||||||||||| |||||||||||||||||| |||||||||||||  |||||||    
T  30725821 ctaatcctgccaatttacccttgcactgtttaatcatttaaaatttcgtccctctccccatttaatcactgccatgtcactaa 30725903  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 219 - 301
Target Start/End: Original strand, 33647025 - 33647107
Alignment:
Q  219 ctaatcctcccattttacccttgtaaaaattaatcatttaagatttcgtccctctccccacttaatcactgccacatcactaa 301  Q
    |||||| | ||| |||||||||| |  | |||||||||||| |||||||| ||||||||| |||||||||||||| |||||||    
T  33647025 ctaatcttgccaatttacccttgcattatttaatcatttaaaatttcgtctctctccccatttaatcactgccacgtcactaa 33647107  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 248 - 293
Target Start/End: Complemental strand, 363136 - 363091
Alignment:
Q  248 ttaatcatttaagatttcgtccctctccccacttaatcactgccac 293  Q
    |||||| ||||| |||||||||||||||||||||||||||||||||    
T  363136 ttaatcgtttaaaatttcgtccctctccccacttaatcactgccac 363091  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 248 - 301
Target Start/End: Original strand, 3059348 - 3059401
Alignment:
Q  248 ttaatcatttaagatttcgtccctctccccacttaatcactgccacatcactaa 301  Q
    |||||||||||| ||||||||||||||| ||||||||||||||||  |||||||    
T  3059348 ttaatcatttaaaatttcgtccctctcctcacttaatcactgccatgtcactaa 3059401  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 248 - 293
Target Start/End: Complemental strand, 14196921 - 14196876
Alignment:
Q  248 ttaatcatttaagatttcgtccctctccccacttaatcactgccac 293  Q
    |||||||||||| |||||| ||||||||||||||||||||||||||    
T  14196921 ttaatcatttaaaatttcgcccctctccccacttaatcactgccac 14196876  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 248 - 293
Target Start/End: Complemental strand, 17734500 - 17734455
Alignment:
Q  248 ttaatcatttaagatttcgtccctctccccacttaatcactgccac 293  Q
    |||||||||||| |||| ||||||||||||||||||||||||||||    
T  17734500 ttaatcatttaaaattttgtccctctccccacttaatcactgccac 17734455  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 233 - 299
Target Start/End: Original strand, 26463255 - 26463321
Alignment:
Q  233 ttacccttgtaaaaattaatcatttaagatttcgtccctctccccacttaatcactgccacatcact 299  Q
    ||||||||| |||  |||||||||||| ||||||||||||  |||| |||||||||||||| |||||    
T  26463255 ttacccttgcaaagtttaatcatttaaaatttcgtccctcatcccagttaatcactgccacgtcact 26463321  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 243 - 301
Target Start/End: Complemental strand, 33648807 - 33648749
Alignment:
Q  243 aaaaattaatcatttaagatttcgtccctctccccacttaatcactgccacatcactaa 301  Q
    |||| ||||||| |||| ||||| ||||||||| |||||||| ||||||||||||||||    
T  33648807 aaaatttaatcacttaaaatttcttccctctcctcacttaattactgccacatcactaa 33648749  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 154 - 226
Target Start/End: Complemental strand, 738084 - 738012
Alignment:
Q  154 attggcttacatatgcatttcattcctgcaattataggtcatttgatttttcatccatgagcttactaatcct 226  Q
    ||||||||| |||||  |||| | ||||||| |||||||||||||| ||||| |||||||  |||||||||||    
T  738084 attggcttaaatatgtctttcgtccctgcaaatataggtcatttgaattttcgtccatgaagttactaatcct 738012  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 154 - 254
Target Start/End: Original strand, 8427197 - 8427297
Alignment:
Q  154 attggcttacatatgcatttcattcctgcaattataggtcatttgatttttcatccatgagcttactaatcctcccattttacccttgtaaaaattaatc 253  Q
    ||||||||| |||||  |||||| | ||||| |||||||||||||| ||||| ||  | |  ||||||||||||||||||| ||| || ||| |||||||    
T  8427197 attggcttaaatatgtctttcatccttgcaaatataggtcatttgaattttcgtctctcaagttactaatcctcccattttgcccctgcaaatattaatc 8427296  T
Q  254 a 254  Q
    |    
T  8427297 a 8427297  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 157 - 257
Target Start/End: Complemental strand, 15819874 - 15819774
Alignment:
Q  157 ggcttacatatgcatttcattcctgcaattataggtcatttgatttttcatccatgagcttactaatcctcccattttacccttgtaaaaattaatcatt 256  Q
    |||||| |||||  |||| | ||||||| |||||||||||||| ||||| ||| |||  ||||||||||| ||| | |||||||| ||| | ||||||||    
T  15819874 ggcttaaatatgtctttcgtccctgcaaatataggtcatttgaattttcgtccctgaagttactaatccttccaatctacccttgcaaatactaatcatt 15819775  T
Q  257 t 257  Q
    |    
T  15819774 t 15819774  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 233 - 301
Target Start/End: Original strand, 24210607 - 24210675
Alignment:
Q  233 ttacccttgtaaaaattaatcatttaagatttcgtccctctccccacttaatcactgccacatcactaa 301  Q
    ||||||||| |||  |||||||||||| ||||| ||||||||||| | ||||||| ||||| |||||||    
T  24210607 ttacccttgcaaagtttaatcatttaaaatttcatccctctccccgcctaatcaccgccacgtcactaa 24210675  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 158 - 257
Target Start/End: Complemental strand, 3299942 - 3299843
Alignment:
Q  158 gcttacatatgcatttcattcctgcaattataggtcatttgatttttcatccatgagcttactaatcctcccattttacccttgtaaaaattaatcattt 257  Q
    ||||| ||||| ||||| | ||||||| |||||||||||||| ||||| ||| |||  ||||||||||| ||| | | || ||| ||| |||||||||||    
T  3299942 gcttaaatatgtatttcgtccctgcaaatataggtcatttgaattttcgtccttgaagttactaatccttccaatctgccattgcaaatattaatcattt 3299843  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 154 - 224
Target Start/End: Original strand, 3299749 - 3299819
Alignment:
Q  154 attggcttacatatgcatttcattcctgcaattataggtcatttgatttttcatccatgagcttactaatc 224  Q
    ||||||||| ||| | ||||| | |||||||  ||||||||||||| |||||||||||||  |||||||||    
T  3299749 attggcttagataggtatttcgtccctgcaaacataggtcatttgaattttcatccatgaagttactaatc 3299819  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 178 - 224
Target Start/End: Original strand, 19296441 - 19296487
Alignment:
Q  178 cctgcaattataggtcatttgatttttcatccatgagcttactaatc 224  Q
    ||||||| |||||||||||||| |||||||||||||  |||||||||    
T  19296441 cctgcaaatataggtcatttgaattttcatccatgaagttactaatc 19296487  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 248 - 293
Target Start/End: Complemental strand, 25486232 - 25486189
Alignment:
Q  248 ttaatcatttaagatttcgtccctctccccacttaatcactgccac 293  Q
    |||||||||||| ||||||||||||  |||||||||||||||||||    
T  25486232 ttaatcatttaaaatttcgtccctc--cccacttaatcactgccac 25486189  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #33
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 248 - 301
Target Start/End: Original strand, 11392929 - 11392982
Alignment:
Q  248 ttaatcatttaagatttcgtccctctccccacttaatcactgccacatcactaa 301  Q
    |||||||||||| ||||||||  |||||| |||||||||||||||  |||||||    
T  11392929 ttaatcatttaaaatttcgtctatctcccaacttaatcactgccatgtcactaa 11392982  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #34
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 157 - 257
Target Start/End: Original strand, 5064335 - 5064435
Alignment:
Q  157 ggcttacatatgcatttcattcctgcaattataggtcatttgatttttcatccatgagcttactaatcctcccattttacccttgtaaaaattaatcatt 256  Q
    |||||| |||||  |||| | |||| || |||| ||||||||| ||||| ||| |||  ||||||||||||||| ||| ||| || ||| ||||||||||    
T  5064335 ggcttaaatatgtctttcgtccctgtaaatataagtcatttgaattttcgtccctgaagttactaatcctcccaatttgcccctgcaaatattaatcatt 5064434  T
Q  257 t 257  Q
    |    
T  5064435 t 5064435  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #35
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 178 - 226
Target Start/End: Complemental strand, 9607679 - 9607631
Alignment:
Q  178 cctgcaattataggtcatttgatttttcatccatgagcttactaatcct 226  Q
    ||||||| |||||||||||||| ||||| |||||||  |||||||||||    
T  9607679 cctgcaaatataggtcatttgaattttcgtccatgaagttactaatcct 9607631  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1493 (Bit Score: 61; Significance: 5e-26; HSPs: 1)
Name: scaffold1493
Description:

Target: scaffold1493; HSP #1
Raw Score: 61; E-Value: 5e-26
Query Start/End: Original strand, 157 - 257
Target Start/End: Original strand, 593 - 693
Alignment:
Q  157 ggcttacatatgcatttcattcctgcaattataggtcatttgatttttcatccatgagcttactaatcctcccattttacccttgtaaaaattaatcatt 256  Q
    |||||| |||||||||||||  ||||||||||||||||||||||||||||||| ||| ||||||||||||| |||||| ||| || ||| ||||||||||    
T  593 ggcttaaatatgcatttcatcactgcaattataggtcatttgatttttcatccctgaacttactaatcctctcattttgcccctgcaaatattaatcatt 692  T
Q  257 t 257  Q
    |    
T  693 t 693  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0182 (Bit Score: 54; Significance: 7e-22; HSPs: 2)
Name: scaffold0182
Description:

Target: scaffold0182; HSP #1
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 157 - 238
Target Start/End: Complemental strand, 14477 - 14396
Alignment:
Q  157 ggcttacatatgcatttcattcctgcaattataggtcatttgatttttcatccatgagcttactaatcctcccattttaccc 238  Q
    |||||| |||||| |||||  |||| ||||||||| ||||||||||||||||| ||||||||||||||||||||||||||||    
T  14477 ggcttaaatatgcttttcacccctgtaattataggccatttgatttttcatccctgagcttactaatcctcccattttaccc 14396  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0182; HSP #2
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 157 - 234
Target Start/End: Original strand, 13134 - 13211
Alignment:
Q  157 ggcttacatatgcatttcattcctgcaattataggtcatttgatttttcatccatgagcttactaatcctcccatttt 234  Q
    |||||| |||||| |||||| |||| || |||||  ||||||||||||||||  |||| ||| |||||||||||||||    
T  13134 ggcttaaatatgcttttcatccctgtaaatatagaccatttgatttttcatctctgagtttagtaatcctcccatttt 13211  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0018 (Bit Score: 50; Significance: 2e-19; HSPs: 1)
Name: scaffold0018
Description:

Target: scaffold0018; HSP #1
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 156 - 257
Target Start/End: Original strand, 73108 - 73209
Alignment:
Q  156 tggcttacatatgcatttcattcctgcaattataggtcatttgatttttcatccatgagcttactaatcctcccattttacccttgtaaaaattaatcat 255  Q
    ||||||| |||||| |||||| |||| |||||| || ||||||| ||||||||| |||||||||||||||||||||||| ||| |||||  | |||||||    
T  73108 tggcttaaatatgcttttcatccctgtaattatgggccatttgacttttcatccctgagcttactaatcctcccattttgcccctgtaattactaatcat 73207  T
Q  256 tt 257  Q
    ||    
T  73208 tt 73209  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0005 (Bit Score: 47; Significance: 1e-17; HSPs: 2)
Name: scaffold0005
Description:

Target: scaffold0005; HSP #1
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 219 - 301
Target Start/End: Complemental strand, 37929 - 37847
Alignment:
Q  219 ctaatcctcccattttacccttgtaaaaattaatcatttaagatttcgtccctctccccacttaatcactgccacatcactaa 301  Q
    ||||||||  || ||||||||||||    |||||||||||| ||||||||||||||||||||||||||||||||| |||||||    
T  37929 ctaatcctgacaatttacccttgtattgtttaatcatttaaaatttcgtccctctccccacttaatcactgccacgtcactaa 37847  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0005; HSP #2
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 247 - 301
Target Start/End: Original strand, 37654 - 37708
Alignment:
Q  247 attaatcatttaagatttcgtccctctccccacttaatcactgccacatcactaa 301  Q
    ||||||||||||| ||||||||| |   || ||||||||||||||||||||||||    
T  37654 attaatcatttaaaatttcgtcctttgaccaacttaatcactgccacatcactaa 37708  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0031 (Bit Score: 46; Significance: 4e-17; HSPs: 1)
Name: scaffold0031
Description:

Target: scaffold0031; HSP #1
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 248 - 301
Target Start/End: Original strand, 69056 - 69109
Alignment:
Q  248 ttaatcatttaagatttcgtccctctccccacttaatcactgccacatcactaa 301  Q
    |||||||||||| ||||||||||||||||||||||||||||||||| |||||||    
T  69056 ttaatcatttaaaatttcgtccctctccccacttaatcactgccacgtcactaa 69109  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0020 (Bit Score: 43; Significance: 0.000000000000003; HSPs: 1)
Name: scaffold0020
Description:

Target: scaffold0020; HSP #1
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 247 - 293
Target Start/End: Original strand, 139762 - 139808
Alignment:
Q  247 attaatcatttaagatttcgtccctctccccacttaatcactgccac 293  Q
    ||||||||||||| |||||||||||||||||||||||||||||||||    
T  139762 attaatcatttaaaatttcgtccctctccccacttaatcactgccac 139808  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0559 (Bit Score: 42; Significance: 0.00000000000001; HSPs: 1)
Name: scaffold0559
Description:

Target: scaffold0559; HSP #1
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 248 - 293
Target Start/End: Original strand, 1324 - 1369
Alignment:
Q  248 ttaatcatttaagatttcgtccctctccccacttaatcactgccac 293  Q
    |||||||||||| |||||||||||||||||||||||||||||||||    
T  1324 ttaatcatttaaaatttcgtccctctccccacttaatcactgccac 1369  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0024 (Bit Score: 42; Significance: 0.00000000000001; HSPs: 1)
Name: scaffold0024
Description:

Target: scaffold0024; HSP #1
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 248 - 293
Target Start/End: Complemental strand, 141900 - 141855
Alignment:
Q  248 ttaatcatttaagatttcgtccctctccccacttaatcactgccac 293  Q
    |||||||||||| |||||||||||||||||||||||||||||||||    
T  141900 ttaatcatttaaaatttcgtccctctccccacttaatcactgccac 141855  T

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Target: scaffold0007 (Bit Score: 42; Significance: 0.00000000000001; HSPs: 1)
Name: scaffold0007
Description:

Target: scaffold0007; HSP #1
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 248 - 293
Target Start/End: Original strand, 1860 - 1905
Alignment:
Q  248 ttaatcatttaagatttcgtccctctccccacttaatcactgccac 293  Q
    |||||||||||| |||||||||||||||||||||||||||||||||    
T  1860 ttaatcatttaaaatttcgtccctctccccacttaatcactgccac 1905  T

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Target: scaffold0205 (Bit Score: 38; Significance: 0.000000000003; HSPs: 1)
Name: scaffold0205
Description:

Target: scaffold0205; HSP #1
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 248 - 293
Target Start/End: Complemental strand, 21275 - 21230
Alignment:
Q  248 ttaatcatttaagatttcgtccctctccccacttaatcactgccac 293  Q
    |||||||||||| ||| |||||||||||||||||||||||||||||    
T  21275 ttaatcatttaaaattccgtccctctccccacttaatcactgccac 21230  T

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Target: scaffold0295 (Bit Score: 37; Significance: 0.00000000001; HSPs: 1)
Name: scaffold0295
Description:

Target: scaffold0295; HSP #1
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 248 - 292
Target Start/End: Original strand, 2234 - 2278
Alignment:
Q  248 ttaatcatttaagatttcgtccctctccccacttaatcactgcca 292  Q
    |||||||||||| |||| |||||||||||||||||||||||||||    
T  2234 ttaatcatttaaaattttgtccctctccccacttaatcactgcca 2278  T

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Target: scaffold0279 (Bit Score: 36; Significance: 0.00000000004; HSPs: 1)
Name: scaffold0279
Description:

Target: scaffold0279; HSP #1
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 178 - 257
Target Start/End: Original strand, 10874 - 10953
Alignment:
Q  178 cctgcaattataggtcatttgatttttcatccatgagcttactaatcctcccattttacccttgtaaaaattaatcattt 257  Q
    ||||||| |||||||||||||| ||||| |||| ||  ||||||||||| ||||||| || ||| ||| |||||||||||    
T  10874 cctgcaaatataggtcatttgaattttcgtccacgaagttactaatccttccattttgccattgcaaatattaatcattt 10953  T

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Target: scaffold0008 (Bit Score: 32; Significance: 0.00000001; HSPs: 1)
Name: scaffold0008
Description:

Target: scaffold0008; HSP #1
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 248 - 299
Target Start/End: Complemental strand, 239888 - 239837
Alignment:
Q  248 ttaatcatttaagatttcgtccctctccccacttaatcactgccacatcact 299  Q
    |||||||||||| |||||||||||   |||||||||| ||||||||||||||    
T  239888 ttaatcatttaaaatttcgtccctacacccacttaattactgccacatcact 239837  T

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