View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF10187_low_21 (Length: 349)

Name: NF10187_low_21
Description: NF10187
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF10187_low_21
NF10187_low_21
[»] scaffold0082 (2 HSPs)
scaffold0082 (137-341)||(57220-57424)
scaffold0082 (186-215)||(5053-5082)
[»] scaffold0024 (1 HSPs)
scaffold0024 (137-336)||(53675-53874)
[»] chr3 (92 HSPs)
chr3 (175-260)||(25283834-25283919)
chr3 (1-128)||(3526638-3526774)
chr3 (1-123)||(5154802-5154932)
chr3 (1-90)||(21802262-21802352)
chr3 (2-128)||(39825543-39825678)
chr3 (9-128)||(7731369-7731496)
chr3 (1-96)||(24721259-24721355)
chr3 (1-96)||(30751316-30751412)
chr3 (1-123)||(49817650-49817779)
chr3 (2-128)||(54014656-54014790)
chr3 (1-128)||(9268623-9268759)
chr3 (1-128)||(11914891-11915027)
chr3 (2-123)||(25025027-25025157)
chr3 (1-81)||(12998853-12998933)
chr3 (1-96)||(25484166-25484262)
chr3 (1-96)||(39937156-39937252)
chr3 (1-76)||(30751227-30751302)
chr3 (9-128)||(40003933-40004061)
chr3 (1-128)||(2985975-2986112)
chr3 (1-96)||(15539928-15540024)
chr3 (1-128)||(5047266-5047402)
chr3 (1-76)||(8764059-8764134)
chr3 (2-96)||(21015291-21015386)
chr3 (1-76)||(21015400-21015475)
chr3 (1-128)||(32858202-32858338)
chr3 (1-76)||(38560066-38560141)
chr3 (2-76)||(12998749-12998823)
chr3 (4-123)||(7014833-7014960)
chr3 (4-96)||(16871313-16871406)
chr3 (9-96)||(7862537-7862625)
chr3 (1-81)||(37585686-37585766)
chr3 (1-76)||(9268733-9268808)
chr3 (1-76)||(16343686-16343761)
chr3 (1-123)||(8127938-8128067)
chr3 (4-96)||(13207543-13207637)
chr3 (1-62)||(7014779-7014840)
chr3 (1-128)||(18546473-18546610)
chr3 (3-76)||(24721172-24721245)
chr3 (1-62)||(37585809-37585870)
chr3 (4-96)||(38560155-38560248)
chr3 (1-62)||(39937066-39937127)
chr3 (1-53)||(5047217-5047269)
chr3 (1-96)||(6019448-6019544)
chr3 (4-76)||(11915001-11915073)
chr3 (12-76)||(39825505-39825569)
chr3 (11-123)||(52866020-52866141)
chr3 (1-123)||(55120667-55120797)
chr3 (1-76)||(21802372-21802447)
chr3 (1-76)||(25024973-25025048)
chr3 (4-96)||(26996075-26996165)
chr3 (9-76)||(26996180-26996247)
chr3 (2-53)||(54014608-54014659)
chr3 (9-76)||(55120776-55120843)
chr3 (1-50)||(13207682-13207731)
chr3 (11-76)||(15540037-15540102)
chr3 (1-81)||(19271669-19271748)
chr3 (1-76)||(3526589-3526664)
chr3 (1-52)||(23043057-23043108)
chr3 (1-76)||(52866120-52866195)
chr3 (9-90)||(8763957-8764039)
chr3 (3-53)||(18546426-18546476)
chr3 (9-62)||(7731328-7731381)
chr3 (1-62)||(25484291-25484352)
chr3 (9-62)||(40004049-40004102)
chr3 (1-62)||(43674231-43674292)
chr3 (9-128)||(33312390-33312521)
chr3 (1-96)||(40717406-40717502)
chr3 (4-96)||(53049981-53050076)
chr3 (9-76)||(2148578-2148645)
chr3 (1-76)||(33312495-33312570)
chr3 (2-76)||(49817758-49817832)
chr3 (1-62)||(2986100-2986161)
chr3 (9-76)||(6019558-6019625)
chr3 (1-92)||(24234148-24234242)
chr3 (1-38)||(32858355-32858392)
chr3 (2-39)||(40703021-40703058)
chr3 (1-62)||(40810811-40810872)
chr3 (1-62)||(40815711-40815772)
chr3 (4-76)||(8128046-8128118)
chr3 (9-52)||(6122576-6122619)
chr3 (1-44)||(7862450-7862493)
chr3 (2-41)||(40717554-40717593)
chr3 (11-76)||(5154757-5154823)
chr3 (9-39)||(51660203-51660233)
chr3 (1-38)||(16871222-16871259)
chr3 (1-62)||(38441036-38441097)
chr3 (9-62)||(38442165-38442218)
chr3 (9-62)||(40816895-40816948)
chr3 (12-96)||(41227263-41227346)
chr3 (1-49)||(48629480-48629529)
chr3 (2-39)||(53034928-53034965)
chr3 (2-50)||(38641275-38641323)
[»] scaffold0049 (3 HSPs)
scaffold0049 (1-96)||(62225-62320)
scaffold0049 (1-96)||(57528-57624)
scaffold0049 (1-62)||(57440-57501)
[»] chr6 (65 HSPs)
chr6 (1-128)||(2965622-2965758)
chr6 (1-96)||(4407918-4408014)
chr6 (1-128)||(19591399-19591535)
chr6 (1-123)||(9964403-9964534)
chr6 (9-96)||(1414728-1414816)
chr6 (1-96)||(30240704-30240800)
chr6 (4-90)||(2039350-2039437)
chr6 (1-128)||(2255413-2255549)
chr6 (1-87)||(18699049-18699135)
chr6 (1-123)||(27660424-27660555)
chr6 (1-123)||(28038944-28039075)
chr6 (4-123)||(6176797-6176924)
chr6 (4-128)||(25948681-25948814)
chr6 (1-76)||(2255523-2255598)
chr6 (3-123)||(9887757-9887885)
chr6 (9-96)||(7850557-7850645)
chr6 (1-96)||(26908301-26908397)
chr6 (1-76)||(2965732-2965807)
chr6 (1-76)||(4408028-4408103)
chr6 (1-76)||(9964513-9964588)
chr6 (1-76)||(16127268-16127343)
chr6 (1-76)||(19591350-19591425)
chr6 (1-76)||(22043675-22043750)
chr6 (1-76)||(25948788-25948863)
chr6 (1-128)||(32276185-32276321)
chr6 (1-96)||(15502667-15502763)
chr6 (1-81)||(7314683-7314763)
chr6 (1-96)||(9865079-9865175)
chr6 (3-70)||(21383888-21383955)
chr6 (1-76)||(26908413-26908488)
chr6 (2-123)||(34204795-34204924)
chr6 (9-70)||(7850665-7850726)
chr6 (1-62)||(9865203-9865264)
chr6 (3-76)||(28039054-28039127)
chr6 (1-76)||(10738915-10738990)
chr6 (2-61)||(15502578-15502637)
chr6 (1-76)||(30240615-30240690)
chr6 (2-76)||(2039456-2039530)
chr6 (1-54)||(27660557-27660610)
chr6 (2-128)||(10738808-10738941)
chr6 (1-61)||(14349093-14349153)
chr6 (18-96)||(14348985-14349064)
chr6 (13-76)||(18699159-18699222)
chr6 (12-75)||(18771901-18771964)
chr6 (1-60)||(34204919-34204978)
chr6 (1-96)||(14597231-14597328)
chr6 (11-76)||(32276146-32276211)
chr6 (1-76)||(21382369-21382445)
chr6 (3-93)||(16127164-16127250)
chr6 (1-96)||(34101032-34101134)
chr6 (1-39)||(7314575-7314613)
chr6 (9-90)||(28228660-28228742)
chr6 (9-62)||(11537871-11537924)
chr6 (9-62)||(11563381-11563434)
chr6 (9-42)||(14597152-14597185)
chr6 (1-63)||(17400129-17400193)
chr6 (2-62)||(26241327-26241387)
chr6 (9-40)||(1414642-1414673)
chr6 (9-81)||(22043581-22043656)
chr6 (9-76)||(34101153-34101220)
chr6 (4-50)||(6176745-6176791)
chr6 (1-51)||(28631026-28631076)
chr6 (1-50)||(10630576-10630625)
chr6 (9-41)||(2686324-2686356)
chr6 (2-46)||(17398460-17398504)
[»] chr2 (100 HSPs)
chr2 (1-96)||(7511486-7511582)
chr2 (1-96)||(7515770-7515866)
chr2 (1-128)||(20962094-20962230)
chr2 (1-123)||(20513719-20513849)
chr2 (1-123)||(20100863-20100994)
chr2 (1-92)||(33216531-33216623)
chr2 (1-96)||(40926818-40926914)
chr2 (1-128)||(12883132-12883268)
chr2 (1-123)||(5513533-5513664)
chr2 (3-96)||(18817327-18817421)
chr2 (2-128)||(28192396-28192531)
chr2 (1-123)||(34963457-34963588)
chr2 (2-123)||(39615687-39615817)
chr2 (1-96)||(8972805-8972901)
chr2 (1-96)||(20891734-20891830)
chr2 (1-128)||(22265185-22265322)
chr2 (1-96)||(36202170-36202266)
chr2 (9-128)||(1320661-1320789)
chr2 (2-96)||(14274276-14274371)
chr2 (2-96)||(18115398-18115493)
chr2 (1-90)||(18756816-18756906)
chr2 (6-128)||(20025375-20025506)
chr2 (11-96)||(39257190-39257276)
chr2 (2-123)||(18966784-18966914)
chr2 (9-81)||(5863244-5863316)
chr2 (1-96)||(30462321-30462417)
chr2 (2-96)||(1151293-1151388)
chr2 (1-76)||(12883242-12883317)
chr2 (1-76)||(42335968-42336043)
chr2 (9-128)||(44353960-44354088)
chr2 (1-90)||(2077188-2077278)
chr2 (2-76)||(27927093-27927167)
chr2 (1-124)||(43209278-43209412)
chr2 (2-90)||(5529070-5529159)
chr2 (4-96)||(25301362-25301455)
chr2 (9-76)||(22265296-22265363)
chr2 (11-128)||(22422820-22422947)
chr2 (1-128)||(25890597-25890733)
chr2 (1-76)||(44354062-44354137)
chr2 (17-87)||(1591894-1591964)
chr2 (2-76)||(25890707-25890781)
chr2 (1-62)||(5863361-5863422)
chr2 (18-90)||(6748890-6748962)
chr2 (9-96)||(8224527-8224615)
chr2 (9-93)||(18755467-18755551)
chr2 (1-69)||(26502414-26502482)
chr2 (1-76)||(396976-397051)
chr2 (1-76)||(1151204-1151279)
chr2 (1-76)||(5513643-5513718)
chr2 (1-76)||(13236822-13236897)
chr2 (1-76)||(18966730-18966805)
chr2 (1-76)||(22422921-22422996)
chr2 (2-96)||(27926984-27927079)
chr2 (1-76)||(39257291-39257366)
chr2 (173-218)||(17870411-17870456)
chr2 (1-124)||(24492594-24492726)
chr2 (9-62)||(28192355-28192408)
chr2 (1-53)||(7511397-7511449)
chr2 (1-53)||(7515681-7515733)
chr2 (9-96)||(9273593-9273681)
chr2 (1-76)||(3328980-3329055)
chr2 (1-76)||(24388764-24388839)
chr2 (1-76)||(25301470-25301545)
chr2 (1-52)||(36202303-36202354)
chr2 (1-76)||(39615633-39615708)
chr2 (1-52)||(43209225-43209276)
chr2 (2-76)||(20100810-20100884)
chr2 (2-76)||(34963404-34963478)
chr2 (1-50)||(20513854-20513903)
chr2 (1-69)||(9273702-9273770)
chr2 (9-76)||(5528977-5529044)
chr2 (1-52)||(30462232-30462283)
chr2 (2-76)||(13987929-13988003)
chr2 (2-76)||(13993827-13993901)
chr2 (1-90)||(24388655-24388744)
chr2 (2-96)||(13987819-13987915)
chr2 (2-96)||(13993717-13993813)
chr2 (9-76)||(1591988-1592055)
chr2 (1-60)||(2532003-2532061)
chr2 (11-62)||(20891656-20891707)
chr2 (10-49)||(24492551-24492590)
chr2 (1-76)||(40926729-40926804)
chr2 (1-59)||(2077094-2077151)
chr2 (1-62)||(27197794-27197855)
chr2 (1-62)||(27853221-27853282)
chr2 (13-50)||(35192241-35192278)
chr2 (1-128)||(35741146-35741280)
chr2 (9-62)||(43441729-43441782)
chr2 (12-76)||(1320763-1320827)
chr2 (3-76)||(8972716-8972791)
chr2 (2-50)||(38232628-38232676)
chr2 (1-40)||(2531869-2531908)
chr2 (1-40)||(6748797-6748836)
chr2 (1-40)||(14274420-14274459)
chr2 (1-40)||(20025516-20025555)
chr2 (1-40)||(20962240-20962279)
chr2 (1-76)||(26502525-26502600)
chr2 (11-45)||(5792462-5792496)
chr2 (9-62)||(43440531-43440584)
chr2 (1-40)||(35192385-35192425)
[»] chr8 (76 HSPs)
chr8 (1-128)||(23352099-23352235)
chr8 (2-128)||(18609321-18609455)
chr8 (1-128)||(5385579-5385715)
chr8 (3-128)||(16669355-16669488)
chr8 (2-128)||(17159210-17159344)
chr8 (11-123)||(43681319-43681440)
chr8 (2-96)||(28004691-28004786)
chr8 (2-96)||(28061993-28062088)
chr8 (1-123)||(7595280-7595411)
chr8 (1-81)||(222666-222746)
chr8 (1-81)||(691821-691901)
chr8 (1-81)||(736289-736369)
chr8 (1-81)||(860184-860264)
chr8 (1-128)||(2672039-2672162)
chr8 (9-96)||(18845100-18845188)
chr8 (1-96)||(31957352-31957447)
chr8 (1-76)||(2672136-2672211)
chr8 (2-96)||(28898878-28898973)
chr8 (2-96)||(40773988-40774083)
chr8 (1-123)||(42933151-42933282)
chr8 (9-96)||(116675-116763)
chr8 (1-81)||(17749911-17749991)
chr8 (2-128)||(37597753-37597887)
chr8 (1-128)||(10760979-10761114)
chr8 (1-128)||(21589889-21590025)
chr8 (1-76)||(28004801-28004876)
chr8 (1-76)||(28062103-28062178)
chr8 (11-96)||(6162982-6163068)
chr8 (2-76)||(16669307-16669381)
chr8 (1-90)||(36574548-36574638)
chr8 (12-96)||(9500897-9500982)
chr8 (1-76)||(5385689-5385764)
chr8 (1-76)||(10761088-10761163)
chr8 (1-76)||(15113925-15114000)
chr8 (9-76)||(23382730-23382797)
chr8 (1-76)||(43681265-43681340)
chr8 (2-124)||(11296602-11296733)
chr8 (3-76)||(22980969-22981042)
chr8 (1-53)||(17159161-17159213)
chr8 (1-81)||(23382828-23382908)
chr8 (1-53)||(23943164-23943216)
chr8 (9-76)||(18609429-18609496)
chr8 (11-76)||(116778-116843)
chr8 (1-62)||(17750029-17750090)
chr8 (1-62)||(17759016-17759077)
chr8 (1-76)||(7595390-7595465)
chr8 (1-76)||(21589999-21590074)
chr8 (2-62)||(31957483-31957544)
chr8 (4-52)||(11296552-11296600)
chr8 (2-70)||(12610742-12610810)
chr8 (1-81)||(21127483-21127563)
chr8 (1-96)||(22980860-22980955)
chr8 (1-96)||(34618020-34618115)
chr8 (12-76)||(34618129-34618193)
chr8 (1-40)||(23352050-23352089)
chr8 (1-40)||(37597894-37597933)
chr8 (1-76)||(42933097-42933172)
chr8 (1-39)||(7910323-7910361)
chr8 (4-70)||(40628340-40628406)
chr8 (1-62)||(17713500-17713561)
chr8 (9-62)||(29841983-29842036)
chr8 (1-62)||(11966088-11966151)
chr8 (4-76)||(18845203-18845274)
chr8 (29-76)||(36574482-36574529)
chr8 (4-43)||(37715187-37715226)
chr8 (1-40)||(39879789-39879828)
chr8 (9-62)||(3260930-3260983)
chr8 (3-40)||(8814920-8814957)
chr8 (11-40)||(9500816-9500845)
chr8 (1-50)||(13198143-13198192)
chr8 (9-62)||(19391692-19391745)
chr8 (1-41)||(6163118-6163158)
chr8 (2-62)||(12318658-12318718)
chr8 (2-54)||(13201849-13201901)
chr8 (4-76)||(31951240-31951312)
chr8 (2-38)||(41007706-41007742)
[»] chr5 (87 HSPs)
chr5 (1-128)||(6143365-6143501)
chr5 (1-96)||(39886563-39886659)
chr5 (2-128)||(18805262-18805397)
chr5 (1-96)||(27451346-27451442)
chr5 (1-96)||(27830005-27830101)
chr5 (9-128)||(20352732-20352860)
chr5 (1-128)||(40616298-40616432)
chr5 (1-123)||(16867810-16867941)
chr5 (2-128)||(21000405-21000540)
chr5 (4-123)||(26404934-26405061)
chr5 (1-96)||(7884918-7885014)
chr5 (1-96)||(8406057-8406153)
chr5 (1-96)||(12369514-12369610)
chr5 (1-96)||(13892615-13892711)
chr5 (1-96)||(22634167-22634263)
chr5 (275-341)||(17660108-17660174)
chr5 (1-96)||(38678229-38678325)
chr5 (1-76)||(5081635-5081710)
chr5 (1-76)||(10690844-10690919)
chr5 (1-76)||(12369624-12369699)
chr5 (2-128)||(5081526-5081661)
chr5 (4-128)||(10690893-10691025)
chr5 (9-128)||(5105158-5105285)
chr5 (2-90)||(30126591-30126680)
chr5 (4-128)||(21262657-21262790)
chr5 (1-96)||(26006563-26006659)
chr5 (1-128)||(11762347-11762483)
chr5 (1-128)||(13952508-13952644)
chr5 (1-76)||(20884194-20884269)
chr5 (1-76)||(37064395-37064470)
chr5 (3-96)||(6802214-6802308)
chr5 (1-87)||(14946454-14946540)
chr5 (2-76)||(18618309-18618383)
chr5 (9-62)||(21262778-21262831)
chr5 (8-96)||(23294564-23294653)
chr5 (1-126)||(29989565-29989700)
chr5 (4-60)||(13892741-13892797)
chr5 (1-76)||(6143475-6143550)
chr5 (9-76)||(11762306-11762373)
chr5 (1-76)||(14946564-14946639)
chr5 (9-76)||(20352691-20352758)
chr5 (1-76)||(29690625-29690700)
chr5 (1-76)||(39886673-39886748)
chr5 (2-76)||(13952618-13952692)
chr5 (2-76)||(18805214-18805288)
chr5 (1-51)||(23294691-23294741)
chr5 (1-62)||(16867934-16867995)
chr5 (1-54)||(26006696-26006749)
chr5 (4-96)||(27316145-27316238)
chr5 (2-90)||(34974147-34974236)
chr5 (1-96)||(25591118-25591214)
chr5 (1-128)||(29690514-29690651)
chr5 (1-61)||(30126495-30126555)
chr5 (2-61)||(38678352-38678411)
chr5 (1-76)||(40616249-40616324)
chr5 (4-61)||(8405971-8406028)
chr5 (9-62)||(21000528-21000581)
chr5 (4-81)||(22833449-22833525)
chr5 (1-76)||(7884828-7884904)
chr5 (9-76)||(2841743-2841810)
chr5 (12-123)||(2841789-2841902)
chr5 (2-76)||(3922848-3922922)
chr5 (4-53)||(27451469-27451518)
chr5 (1-68)||(10542217-10542284)
chr5 (9-60)||(22634293-22634344)
chr5 (1-40)||(27830154-27830193)
chr5 (9-76)||(29989522-29989589)
chr5 (18-76)||(25881099-25881157)
chr5 (1-39)||(27316054-27316092)
chr5 (2-76)||(34974054-34974127)
chr5 (2-52)||(36320659-36320709)
chr5 (3-81)||(36873103-36873181)
chr5 (1-62)||(7243240-7243301)
chr5 (4-69)||(19635017-19635082)
chr5 (1-128)||(20884083-20884220)
chr5 (9-63)||(22833572-22833628)
chr5 (1-41)||(26405074-26405114)
chr5 (1-76)||(13006580-13006655)
chr5 (1-52)||(26719370-26719421)
chr5 (1-52)||(26989114-26989165)
chr5 (19-96)||(38941490-38941567)
chr5 (2-36)||(42418712-42418746)
chr5 (9-62)||(7242695-7242748)
chr5 (1-50)||(7578150-7578199)
chr5 (1-62)||(26524567-26524628)
chr5 (23-90)||(5824469-5824537)
chr5 (4-76)||(13079604-13079676)
[»] chr7 (95 HSPs)
chr7 (1-90)||(3216099-3216189)
chr7 (1-96)||(15984320-15984416)
chr7 (1-96)||(33582922-33583018)
chr7 (1-96)||(41745228-41745324)
chr7 (4-123)||(17358108-17358236)
chr7 (11-93)||(4098133-4098215)
chr7 (1-123)||(11666860-11666991)
chr7 (2-95)||(22947507-22947601)
chr7 (9-96)||(12179988-12180076)
chr7 (1-96)||(46483672-46483768)
chr7 (1-128)||(7881466-7881602)
chr7 (1-128)||(43742029-43742165)
chr7 (1-90)||(39459489-39459579)
chr7 (1-87)||(41877235-41877321)
chr7 (4-81)||(30631523-30631600)
chr7 (1-96)||(16274519-16274615)
chr7 (1-96)||(30441233-30441329)
chr7 (1-96)||(38416036-38416131)
chr7 (9-128)||(38651884-38652012)
chr7 (1-87)||(14542660-14542746)
chr7 (1-96)||(31079160-31079256)
chr7 (1-96)||(37101361-37101457)
chr7 (4-76)||(43742139-43742211)
chr7 (1-76)||(22947417-22947492)
chr7 (1-60)||(30441359-30441418)
chr7 (1-76)||(37391230-37391305)
chr7 (1-76)||(38415947-38416022)
chr7 (2-76)||(7881576-7881650)
chr7 (9-90)||(11469030-11469112)
chr7 (2-76)||(12180090-12180164)
chr7 (1-94)||(20033713-20033807)
chr7 (11-81)||(28311260-28311330)
chr7 (2-76)||(30631418-30631492)
chr7 (4-96)||(21872165-21872257)
chr7 (4-96)||(46134765-46134858)
chr7 (1-62)||(47668298-47668359)
chr7 (9-96)||(30538196-30538283)
chr7 (1-81)||(35077784-35077864)
chr7 (1-69)||(37446633-37446701)
chr7 (1-76)||(11666806-11666881)
chr7 (9-95)||(18449416-18449503)
chr7 (1-76)||(31079270-31079345)
chr7 (1-76)||(41877136-41877211)
chr7 (1-76)||(47668178-47668253)
chr7 (3-96)||(31298600-31298694)
chr7 (1-62)||(3687781-3687842)
chr7 (1-96)||(24932091-24932188)
chr7 (4-96)||(31643988-31644081)
chr7 (1-76)||(18318623-18318699)
chr7 (1-96)||(25728330-25728426)
chr7 (4-76)||(33582835-33582907)
chr7 (1-76)||(4098233-4098308)
chr7 (1-76)||(16274629-16274704)
chr7 (1-76)||(17358054-17358129)
chr7 (3-62)||(46483796-46483855)
chr7 (4-62)||(20033837-20033895)
chr7 (9-128)||(43989102-43989227)
chr7 (4-76)||(14542770-14542842)
chr7 (3-90)||(39868518-39868606)
chr7 (9-96)||(46945046-46945134)
chr7 (9-76)||(30538297-30538364)
chr7 (3-62)||(49100258-49100317)
chr7 (2-128)||(18318515-18318649)
chr7 (1-62)||(11684276-11684337)
chr7 (23-76)||(39868629-39868682)
chr7 (9-62)||(46944964-46945016)
chr7 (1-76)||(18449518-18449593)
chr7 (3-51)||(37101496-37101544)
chr7 (1-40)||(15984230-15984269)
chr7 (2-80)||(30165525-30165601)
chr7 (9-76)||(41745147-41745214)
chr7 (3-40)||(3158438-3158475)
chr7 (1-38)||(15093655-15093692)
chr7 (11-76)||(25677152-25677217)
chr7 (2-39)||(34116415-34116452)
chr7 (2-43)||(37536856-37536897)
chr7 (9-41)||(3687314-3687346)
chr7 (4-40)||(9712590-9712626)
chr7 (1-40)||(9712452-9712491)
chr7 (1-40)||(15129660-15129699)
chr7 (1-52)||(47532834-47532885)
chr7 (10-76)||(24438717-24438783)
chr7 (9-39)||(39459404-39459434)
chr7 (9-62)||(813592-813645)
chr7 (9-62)||(9556751-9556803)
chr7 (1-50)||(11685222-11685271)
chr7 (1-38)||(25677261-25677298)
chr7 (9-38)||(31644138-31644167)
chr7 (19-76)||(38651853-38651910)
chr7 (9-38)||(47533702-47533731)
chr7 (1-45)||(9555605-9555649)
chr7 (4-40)||(15129806-15129842)
chr7 (4-40)||(18024807-18024843)
chr7 (4-40)||(24438854-24438890)
chr7 (1-62)||(42042841-42042904)
[»] scaffold0744 (2 HSPs)
scaffold0744 (1-96)||(1353-1449)
scaffold0744 (1-50)||(1457-1506)
[»] chr4 (84 HSPs)
chr4 (1-96)||(19203638-19203734)
chr4 (2-93)||(28755228-28755319)
chr4 (1-96)||(8401344-8401440)
chr4 (4-128)||(9663303-9663436)
chr4 (4-128)||(19495510-19495643)
chr4 (1-96)||(47465227-47465323)
chr4 (1-128)||(27487558-27487694)
chr4 (1-123)||(4758501-4758632)
chr4 (3-96)||(40269693-40269787)
chr4 (9-128)||(17697212-17697341)
chr4 (9-96)||(6458062-6458150)
chr4 (1-96)||(49236376-49236472)
chr4 (9-96)||(49633075-49633163)
chr4 (1-128)||(13168883-13169017)
chr4 (1-123)||(19042138-19042269)
chr4 (4-96)||(18638186-18638279)
chr4 (1-123)||(54442088-54442218)
chr4 (1-123)||(11347321-11347452)
chr4 (1-128)||(15323528-15323665)
chr4 (4-81)||(21822618-21822695)
chr4 (9-96)||(6378430-6378518)
chr4 (1-61)||(8401255-8401315)
chr4 (1-96)||(49249468-49249564)
chr4 (1-76)||(15323479-15323554)
chr4 (9-76)||(17697315-17697382)
chr4 (2-61)||(18638308-18638367)
chr4 (1-76)||(20570061-20570136)
chr4 (2-96)||(45617512-45617607)
chr4 (1-123)||(32499-32630)
chr4 (1-123)||(19291450-19291581)
chr4 (9-90)||(20569957-20570039)
chr4 (4-76)||(19495464-19495536)
chr4 (9-76)||(6810630-6810697)
chr4 (9-76)||(13168842-13168909)
chr4 (1-76)||(47465337-47465412)
chr4 (1-76)||(54442034-54442109)
chr4 (3-52)||(9150774-9150823)
chr4 (9-128)||(36498306-36498438)
chr4 (2-128)||(10264449-10264583)
chr4 (9-81)||(18909616-18909688)
chr4 (1-53)||(19203771-19203823)
chr4 (2-96)||(12294414-12294508)
chr4 (1-63)||(39534113-39534175)
chr4 (1-62)||(11347267-11347328)
chr4 (3-76)||(19675769-19675842)
chr4 (12-96)||(38095097-38095182)
chr4 (1-62)||(49632971-49633032)
chr4 (24-128)||(6810543-6810656)
chr4 (9-96)||(22324580-22324667)
chr4 (12-76)||(27487668-27487732)
chr4 (4-76)||(28755138-28755210)
chr4 (1-61)||(47283557-47283617)
chr4 (1-76)||(4758611-4758686)
chr4 (1-76)||(15977336-15977411)
chr4 (1-76)||(36498257-36498332)
chr4 (11-96)||(23573301-23573387)
chr4 (11-52)||(45617643-45617684)
chr4 (1-53)||(43071064-43071116)
chr4 (1-40)||(9150916-9150955)
chr4 (5-76)||(49249578-49249649)
chr4 (2-39)||(12294560-12294597)
chr4 (1-50)||(23573212-23573261)
chr4 (9-70)||(26717145-26717206)
chr4 (1-62)||(34443473-34443533)
chr4 (9-50)||(39537494-39537535)
chr4 (9-62)||(39702380-39702433)
chr4 (1-62)||(40269612-40269673)
chr4 (1-38)||(44868091-44868128)
chr4 (4-40)||(13578857-13578893)
chr4 (1-95)||(15977429-15977524)
chr4 (4-67)||(6788055-6788118)
chr4 (1-40)||(13578719-13578758)
chr4 (2-60)||(17138706-17138765)
chr4 (9-76)||(18909719-18909785)
chr4 (1-76)||(19042084-19042159)
chr4 (2-40)||(44434267-44434305)
chr4 (3-40)||(3239487-3239524)
chr4 (1-38)||(6378573-6378610)
chr4 (3-76)||(22324492-22324565)
chr4 (2-95)||(23962752-23962848)
chr4 (1-50)||(34442654-34442703)
chr4 (9-50)||(55807606-55807647)
chr4 (4-40)||(9663259-9663295)
chr4 (1-45)||(39702049-39702093)
[»] chr1 (76 HSPs)
chr1 (1-128)||(15734524-15734660)
chr1 (2-96)||(39934982-39935077)
chr1 (1-128)||(13430301-13430436)
chr1 (1-96)||(11586279-11586375)
chr1 (4-128)||(12163218-12163349)
chr1 (2-128)||(26712109-26712243)
chr1 (1-76)||(16985350-16985425)
chr1 (1-90)||(40633233-40633323)
chr1 (4-96)||(16985243-16985336)
chr1 (12-123)||(12886868-12886977)
chr1 (4-128)||(24169206-24169339)
chr1 (12-123)||(1340786-1340906)
chr1 (1-128)||(9631705-9631841)
chr1 (1-123)||(22374666-22374797)
chr1 (9-96)||(1613649-1613737)
chr1 (9-128)||(6953938-6954066)
chr1 (1-76)||(6954040-6954115)
chr1 (1-76)||(40633138-40633213)
chr1 (1-128)||(51166731-51166867)
chr1 (9-90)||(6587624-6587706)
chr1 (1-90)||(9403372-9403462)
chr1 (3-81)||(26379694-26379772)
chr1 (9-90)||(45323332-45323414)
chr1 (4-96)||(5246325-5246418)
chr1 (3-76)||(29525674-29525747)
chr1 (2-123)||(38601274-38601404)
chr1 (1-61)||(15541479-15541539)
chr1 (1-96)||(15541568-15541664)
chr1 (9-96)||(25395557-25395645)
chr1 (1-76)||(5246431-5246506)
chr1 (1-76)||(9631815-9631890)
chr1 (9-76)||(15734721-15734788)
chr1 (1-90)||(23284824-23284914)
chr1 (9-123)||(44545691-44545814)
chr1 (1-62)||(27270387-27270448)
chr1 (9-89)||(29525768-29525849)
chr1 (3-76)||(39935091-39935164)
chr1 (2-128)||(29641692-29641826)
chr1 (9-76)||(12163323-12163390)
chr1 (1-76)||(12886814-12886889)
chr1 (2-61)||(37216415-37216474)
chr1 (1-76)||(38601220-38601295)
chr1 (1-76)||(48044734-48044809)
chr1 (9-90)||(1819142-1819223)
chr1 (4-53)||(16985074-16985123)
chr1 (1-76)||(1340732-1340807)
chr1 (9-76)||(1613753-1613820)
chr1 (1-76)||(1819243-1819318)
chr1 (9-76)||(9403481-9403548)
chr1 (1-76)||(22374612-22374687)
chr1 (1-52)||(46173102-46173153)
chr1 (1-62)||(11586403-11586464)
chr1 (2-96)||(51238098-51238190)
chr1 (4-60)||(47675349-47675405)
chr1 (1-76)||(13430410-13430484)
chr1 (9-76)||(25395476-25395543)
chr1 (1-76)||(26712060-26712135)
chr1 (9-76)||(35552139-35552206)
chr1 (2-95)||(16087288-16087382)
chr1 (9-128)||(48044783-48044911)
chr1 (20-81)||(49613688-49613749)
chr1 (4-76)||(24169160-24169232)
chr1 (2-62)||(35552034-35552094)
chr1 (4-76)||(49613579-49613651)
chr1 (1-40)||(44345055-44345094)
chr1 (1-44)||(45323239-45323282)
chr1 (1-96)||(163157-163254)
chr1 (4-40)||(17889576-17889612)
chr1 (9-40)||(17889724-17889755)
chr1 (3-38)||(44345198-44345233)
chr1 (2-76)||(32116331-32116404)
chr1 (9-62)||(43060977-43061031)
chr1 (1-62)||(23513760-23513820)
chr1 (2-38)||(29641643-29641679)
chr1 (2-50)||(33465795-33465843)
chr1 (1-41)||(52881260-52881300)
[»] scaffold0420 (2 HSPs)
scaffold0420 (1-96)||(4384-4480)
scaffold0420 (3-62)||(4296-4356)
[»] scaffold0599 (2 HSPs)
scaffold0599 (1-128)||(6642-6778)
scaffold0599 (4-76)||(6752-6824)
[»] scaffold0031 (1 HSPs)
scaffold0031 (1-128)||(92764-92900)
[»] scaffold0740 (2 HSPs)
scaffold0740 (2-128)||(2944-3079)
scaffold0740 (9-76)||(3053-3120)
[»] scaffold0199 (2 HSPs)
scaffold0199 (4-128)||(11895-12027)
scaffold0199 (1-76)||(12001-12076)
[»] scaffold0001 (2 HSPs)
scaffold0001 (3-96)||(403607-403701)
scaffold0001 (3-76)||(403520-403593)
[»] scaffold0035 (2 HSPs)
scaffold0035 (1-128)||(72230-72365)
scaffold0035 (4-76)||(72339-72411)
[»] scaffold0090 (2 HSPs)
scaffold0090 (1-81)||(15416-15496)
scaffold0090 (9-76)||(15526-15593)
[»] scaffold0023 (2 HSPs)
scaffold0023 (1-90)||(125460-125550)
scaffold0023 (1-40)||(125366-125405)
[»] scaffold0235 (3 HSPs)
scaffold0235 (3-128)||(24243-24377)
scaffold0235 (3-76)||(12649-12722)
scaffold0235 (3-76)||(24351-24424)
[»] scaffold0734 (2 HSPs)
scaffold0734 (1-96)||(3021-3117)
scaffold0734 (1-76)||(3131-3206)
[»] scaffold0116 (2 HSPs)
scaffold0116 (1-96)||(5210-5306)
scaffold0116 (9-53)||(5344-5389)
[»] scaffold0148 (2 HSPs)
scaffold0148 (9-96)||(24568-24656)
scaffold0148 (3-62)||(24480-24538)
[»] scaffold0098 (2 HSPs)
scaffold0098 (1-81)||(4011-4091)
scaffold0098 (1-76)||(4120-4195)
[»] scaffold0555 (2 HSPs)
scaffold0555 (1-123)||(6735-6866)
scaffold0555 (2-76)||(6845-6919)
[»] scaffold0352 (2 HSPs)
scaffold0352 (11-123)||(9691-9802)
scaffold0352 (1-61)||(9637-9697)
[»] scaffold0043 (1 HSPs)
scaffold0043 (1-96)||(47120-47216)
[»] scaffold0009 (4 HSPs)
scaffold0009 (2-96)||(7475-7570)
scaffold0009 (9-76)||(7394-7461)
scaffold0009 (1-76)||(24924-25000)
scaffold0009 (2-90)||(24814-24904)
[»] scaffold0559 (1 HSPs)
scaffold0559 (2-90)||(3248-3338)
[»] scaffold0019 (1 HSPs)
scaffold0019 (1-62)||(142306-142367)
[»] scaffold0284 (2 HSPs)
scaffold0284 (1-76)||(3413-3488)
scaffold0284 (1-44)||(3500-3543)
[»] scaffold0037 (2 HSPs)
scaffold0037 (1-54)||(96626-96679)
scaffold0037 (1-40)||(96513-96552)
[»] scaffold0003 (1 HSPs)
scaffold0003 (1-62)||(249978-250039)
[»] scaffold0021 (1 HSPs)
scaffold0021 (9-62)||(23954-24007)
[»] scaffold0809 (1 HSPs)
scaffold0809 (9-96)||(1862-1950)
[»] scaffold0038 (1 HSPs)
scaffold0038 (9-90)||(29158-29240)
[»] scaffold0473 (1 HSPs)
scaffold0473 (9-96)||(1682-1764)


Alignment Details
Target: scaffold0082 (Bit Score: 193; Significance: 1e-105; HSPs: 2)
Name: scaffold0082
Description:

Target: scaffold0082; HSP #1
Raw Score: 193; E-Value: 1e-105
Query Start/End: Original strand, 137 - 341
Target Start/End: Complemental strand, 57424 - 57220
Alignment:
Q  137 cccatgctgagtcacaggcagcgcctcggaaagcgtggacgagccacatgcagggaaacttgcacgtgtggttctggccggggaccccggtatactgtac 236  Q
    ||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  57424 cccatgctgagtcacaggcagcgcctcggaaagcgcggacgagccacatgcagggaaacttgcacgtgtggttctggccggggaccccggtatactgtac 57325  T
Q  237 taatatgtgtaggtccccgtaattcgagtgagattgtcatggcgcaaaagcatatatggtccggtattcccttgttccctgtattggttatgttcttcat 336  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||    
T  57324 taatatgtgtaggtccccgtaattcgagtgagattgtcatggcgcaaaagcagatatggtccggtattcccttgttccctgtattggttatgttcttcat 57225  T
Q  337 ctctc 341  Q
     ||||    
T  57224 ttctc 57220  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0082; HSP #2
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 186 - 215
Target Start/End: Original strand, 5053 - 5082
Alignment:
Q  186 gcagggaaacttgcacgtgtggttctggcc 215  Q
    ||||||||||||||||||||||||||||||    
T  5053 gcagggaaacttgcacgtgtggttctggcc 5082  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0024 (Bit Score: 172; Significance: 2e-92; HSPs: 1)
Name: scaffold0024
Description:

Target: scaffold0024; HSP #1
Raw Score: 172; E-Value: 2e-92
Query Start/End: Original strand, 137 - 336
Target Start/End: Original strand, 53675 - 53874
Alignment:
Q  137 cccatgctgagtcacaggcagcgcctcggaaagcgtggacgagccacatgcagggaaacttgcacgtgtggttctggccggggaccccggtatactgtac 236  Q
    ||||||||||||||||||||||||||||||||||| |||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||    
T  53675 cccatgctgagtcacaggcagcgcctcggaaagcgcggacgagccacatgaagggaaacttgcacgtgtggttctggccggggaccccggtatactgtac 53774  T
Q  237 taatatgtgtaggtccccgtaattcgagtgagattgtcatggcgcaaaagcatatatggtccggtattcccttgttccctgtattggttatgttcttcat 336  Q
    ||||||||| |||||| |||||||||||||||||||||||||||||||| || |||||||||||||||||||||||| ||||||||||||||||||||||    
T  53775 taatatgtgcaggtcctcgtaattcgagtgagattgtcatggcgcaaaatcagatatggtccggtattcccttgttcactgtattggttatgttcttcat 53874  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 78; Significance: 3e-36; HSPs: 92)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 78; E-Value: 3e-36
Query Start/End: Original strand, 175 - 260
Target Start/End: Complemental strand, 25283919 - 25283834
Alignment:
Q  175 acgagccacatgcagggaaacttgcacgtgtggttctggccggggaccccggtatactgtactaatatgtgtaggtccccgtaatt 260  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||| |||||||||    
T  25283919 acgagccacatgcagggaaacttgcacgtgtggttctggccggggaccccgttatactgtactaatatgtgtaggttcccgtaatt 25283834  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 1 - 128
Target Start/End: Complemental strand, 3526774 - 3526638
Alignment:
Q  1 cccctattaaattttcggtttgatttgcaccctcgtaaaatttttattttccggtaaacacctttaatagaccattc-aaaaccaaaattttttgaa--- 96  Q
    ||||||| ||||||||||||||||||||||||||||||| |||||||||||||| ||||||| ||||||| |||||| ||||||||||||| |||||       
T  3526774 cccctataaaattttcggtttgatttgcaccctcgtaaattttttattttccggaaaacacccttaataggccattcaaaaaccaaaatttcttgaaaaa 3526675  T
Q  97 -----ctgaaaatgacctattaggggtgtttttcgga 128  Q
         ||||||||| ||||||||||||||||||||||    
T  3526674 aaattctgaaaatggcctattaggggtgtttttcgga 3526638  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 69; E-Value: 6e-31
Query Start/End: Original strand, 1 - 123
Target Start/End: Complemental strand, 5154932 - 5154802
Alignment:
Q  1 cccctattaaattttcggtttgatttgcaccctcgtaaaatttttattttccggtaaacacctttaatagaccattc-aaaaccaaaattttttgaa--- 96  Q
    ||||||| |||||||||||||||||||||||||||||||||||||||||| ||| ||||||| ||||||| |||||| ||||||||||||| |||||       
T  5154932 cccctataaaattttcggtttgatttgcaccctcgtaaaatttttatttttcggaaaacacccttaataggccattcaaaaaccaaaatttcttgaaaaa 5154833  T
Q  97 ----ctgaaaatgacctattaggggtgtttt 123  Q
        ||||||||| |||||||||||||||||    
T  5154832 aaatctgaaaatggcctattaggggtgtttt 5154802  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 1 - 90
Target Start/End: Original strand, 21802262 - 21802352
Alignment:
Q  1 cccctattaaattttcggtttgatttgcaccctcgtaaaatttttattttccggtaaacacctttaatagaccattc-aaaaccaaaattt 90  Q
    ||||||| |||||||||||||||||||||||||||||||||||||||||||||| ||||||| ||||||| |||||| |||||||||||||    
T  21802262 cccctataaaattttcggtttgatttgcaccctcgtaaaatttttattttccggaaaacacccttaataggccattcaaaaaccaaaattt 21802352  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 2 - 128
Target Start/End: Complemental strand, 39825678 - 39825543
Alignment:
Q  2 ccctattaaattttcggtttgatttgcaccctcgtaaaatttttattttccggtaaacacctttaatagaccattc-aaaaccaaaattttttgaa---- 96  Q
    |||||| |||||||||||||||||||||||||||||||||||||||||| ||| ||||||| ||||||| |||||| ||||||||||||| |||||        
T  39825678 ccctataaaattttcggtttgatttgcaccctcgtaaaatttttatttttcggaaaacacccttaataggccattcaaaaaccaaaatttcttgaaaaat 39825579  T
Q  97 ----ctgaaaatgacctattaggggtgtttttcgga 128  Q
        ||||||||| ||||||||||||||||| ||||    
T  39825578 aattctgaaaatggcctattaggggtgttttccgga 39825543  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 9 - 128
Target Start/End: Complemental strand, 7731496 - 7731369
Alignment:
Q  9 aaattttcggtttgatttgcaccctcgtaaaatttttattttccggtaaacacctttaatagaccattc-aaaaccaaaattttttgaa-------ctga 100  Q
    ||||||||||||||||||||| |||||||||||||||||||||||  ||||||| ||||||| |||||| ||||||||||||| |||||       ||||    
T  7731496 aaattttcggtttgatttgcaacctcgtaaaatttttattttccgaaaaacacccttaataggccattcaaaaaccaaaatttcttgaaaaaaattctga 7731397  T
Q  101 aaatgacctattaggggtgtttttcgga 128  Q
    ||||||||||||||||||||||| ||||    
T  7731396 aaatgacctattaggggtgttttccgga 7731369  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 1 - 96
Target Start/End: Complemental strand, 24721355 - 24721259
Alignment:
Q  1 cccctattaaattttcggtttgatttgcaccctcgtaaaatttttattttccggtaaacacctttaatagaccattc-aaaaccaaaattttttgaa 96  Q
    ||||||| ||||||||||||||||||||||| |||||||||||||||||| ||| ||||||||||||||| |||||| ||||||||||||| |||||    
T  24721355 cccctataaaattttcggtttgatttgcaccttcgtaaaatttttatttttcggaaaacacctttaataggccattcaaaaaccaaaatttcttgaa 24721259  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 1 - 96
Target Start/End: Complemental strand, 30751412 - 30751316
Alignment:
Q  1 cccctattaaattttcggtttgatttgcaccctcgtaaaatttttattttccggtaaacacctttaatagaccattc-aaaaccaaaattttttgaa 96  Q
    ||||||| ||||||||||||||||||||||| |||||||||||||||||||||| ||||||| ||||||| |||||| ||||||||||||| |||||    
T  30751412 cccctataaaattttcggtttgatttgcaccttcgtaaaatttttattttccggaaaacacccttaataggccattcaaaaaccaaaatttcttgaa 30751316  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 1 - 123
Target Start/End: Original strand, 49817650 - 49817779
Alignment:
Q  1 cccctattaaattttcggtttgatttgcaccctcgtaaaatttttattttccggtaaacacctttaatagaccattc-aaaaccaaaattttttgaa--- 96  Q
    ||||||| |||||||||||||||||||||||||||||||||||||||||||| | ||||||| ||||||| |||||| ||||||||||||| |||||       
T  49817650 cccctataaaattttcggtttgatttgcaccctcgtaaaatttttattttcc-gaaaacacccttaataggccattcaaaaaccaaaatttcttgaaaaa 49817748  T
Q  97 ----ctgaaaatgacctattaggggtgtttt 123  Q
        ||||||||| |||||||||||||||||    
T  49817749 aattctgaaaatggcctattaggggtgtttt 49817779  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 2 - 128
Target Start/End: Complemental strand, 54014790 - 54014656
Alignment:
Q  2 ccctattaaattttcggtttgatttgcaccctcgtaaaatttttattttccggtaaacacctttaatagaccattc-aaaaccaaaattttttgaa---- 96  Q
    |||||| |||||||||||||||||| ||||||||||||||||||||||||||| ||||||| |||||||  ||||| ||||||||||||| |||||        
T  54014790 ccctataaaattttcggtttgattttcaccctcgtaaaatttttattttccggaaaacacccttaatagggcattcaaaaaccaaaatttcttgaaaaaa 54014691  T
Q  97 ---ctgaaaatgacctattaggggtgtttttcgga 128  Q
       ||||||||| |||||||||||| |||||||||    
T  54014690 aatctgaaaatggcctattaggggtatttttcgga 54014656  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 64; E-Value: 6e-28
Query Start/End: Original strand, 1 - 128
Target Start/End: Original strand, 9268623 - 9268759
Alignment:
Q  1 cccctattaaattttcggtttgatttgcaccctcgtaaaatttttattttccggtaaacacctttaatagaccattc-aaaaccaaaattttttgaa--- 96  Q
    ||||||| ||||||||||||||||||||||||||||||||  |||||||||||| |||||||||||||||  ||||| ||||||||||||| |||||       
T  9268623 cccctataaaattttcggtttgatttgcaccctcgtaaaaaatttattttccggaaaacacctttaataggtcattcaaaaaccaaaatttcttgaaaaa 9268722  T
Q  97 -----ctgaaaatgacctattaggggtgtttttcgga 128  Q
         ||||||||| ||||||||||||||||| ||||    
T  9268723 aaattctgaaaatggcctattaggggtgttttccgga 9268759  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 64; E-Value: 6e-28
Query Start/End: Original strand, 1 - 128
Target Start/End: Original strand, 11914891 - 11915027
Alignment:
Q  1 cccctattaaattttcggtttgatttgcaccctcgtaaaatttttattttccggtaaacacctttaatagaccattc-aaaaccaaaattttttgaa--- 96  Q
    ||||||| ||||||||||||| |||| |||||||||||||||||||||||| || ||||||| ||||||| |||||| |||||||||||||||||||       
T  11914891 cccctataaaattttcggtttaattttcaccctcgtaaaatttttattttctggaaaacacccttaataggccattcaaaaaccaaaattttttgaaaaa 11914990  T
Q  97 -----ctgaaaatgacctattaggggtgtttttcgga 128  Q
         ||||||||| ||||||||||||||||| ||||    
T  11914991 aaattctgaaaatggcctattaggggtgttttccgga 11915027  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 2 - 123
Target Start/End: Complemental strand, 25025157 - 25025027
Alignment:
Q  2 ccctattaaattttcggtttgatttgcaccctcgtaaaatttttattttccggtaaacacctttaatagaccattc-aaaaccaaaattttttgaa---- 96  Q
    |||||| |||||||||| |||||||||||||| |||||||||||||||||||| ||||||| ||||||| |||||| ||||||||||||| |||||        
T  25025157 ccctataaaattttcggattgatttgcacccttgtaaaatttttattttccgggaaacacccttaataggccattcaaaaaccaaaatttcttgaaaaaa 25025058  T
Q  97 ----ctgaaaatgacctattaggggtgtttt 123  Q
        ||||||||| |||||||||||||||||    
T  25025057 aattctgaaaatggcctattaggggtgtttt 25025027  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 1 - 81
Target Start/End: Complemental strand, 12998933 - 12998853
Alignment:
Q  1 cccctattaaattttcggtttgatttgcaccctcgtaaaatttttattttccggtaaacacctttaatagaccattcaaaa 81  Q
    ||||||| |||||||||||||||||| ||||||||||||||||||||||||||| ||||||||||||||| ||||| ||||    
T  12998933 cccctataaaattttcggtttgattttcaccctcgtaaaatttttattttccggaaaacacctttaataggccatttaaaa 12998853  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 1 - 96
Target Start/End: Original strand, 25484166 - 25484262
Alignment:
Q  1 cccctattaaattttcggtttgatttgcaccctcgtaaaatttttattttccggtaaacacctttaatagaccattc-aaaaccaaaattttttgaa 96  Q
    ||||||| |||||||||||||||||||||||||||||||| ||||||||||||  ||||||| ||||||| |||||| ||||||||||||| |||||    
T  25484166 cccctataaaattttcggtttgatttgcaccctcgtaaaaattttattttccgaaaaacaccgttaataggccattcaaaaaccaaaatttcttgaa 25484262  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 1 - 96
Target Start/End: Complemental strand, 39937252 - 39937156
Alignment:
Q  1 cccctattaaattttcggtttgatttgcaccctcgtaaaatttttattttccggtaaacacctttaatagaccattc-aaaaccaaaattttttgaa 96  Q
    ||||||| ||||||||| |||||||| ||||||||||||||||||||||||||| ||||||| ||||||| |||||| ||||||||||||| |||||    
T  39937252 cccctataaaattttcgatttgattttcaccctcgtaaaatttttattttccggaaaacacccttaataggccattcaaaaaccaaaatttcttgaa 39937156  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 1 - 76
Target Start/End: Original strand, 30751227 - 30751302
Alignment:
Q  1 cccctattaaattttcggtttgatttgcaccctcgtaaaatttttattttccggtaaacacctttaatagaccatt 76  Q
    ||||||| ||||||||||| |||||||||||||||||||||||||||||||||| ||||||||||||||| |||||    
T  30751227 cccctataaaattttcggtgtgatttgcaccctcgtaaaatttttattttccggaaaacacctttaataggccatt 30751302  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 9 - 128
Target Start/End: Original strand, 40003933 - 40004061
Alignment:
Q  9 aaattttcggtttgatttgcaccctcgtaaaatttttattttccggtaaacacctttaatagaccattc-aaaaccaaaattttttgaa--------ctg 99  Q
    |||||||||||||||||||||  ||||||||||||||||||||||  ||||||| ||||||| |||||| ||||||||||||| |||||        |||    
T  40003933 aaattttcggtttgatttgcaatctcgtaaaatttttattttccgaaaaacacccttaataggccattcaaaaaccaaaatttcttgaaaaaaaattctg 40004032  T
Q  100 aaaatgacctattaggggtgtttttcgga 128  Q
    |||||||||||||||||||||||| ||||    
T  40004033 aaaatgacctattaggggtgttttccgga 40004061  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 1 - 128
Target Start/End: Original strand, 2985975 - 2986112
Alignment:
Q  1 cccctattaaattttcggtttgatttgcaccctcgtaaaatttttattttccggtaaacacctttaatagaccattc-aaaaccaaaattttttgaa--- 96  Q
    ||||||| |||||||||||||||||||||||||||||||| ||||||||| ||| ||||||| ||||||  |||||| ||||||||||||| |||||       
T  2985975 cccctataaaattttcggtttgatttgcaccctcgtaaaaattttatttttcggaaaacacccttaatatgccattcaaaaaccaaaatttcttgaaaaa 2986074  T
Q  97 ------ctgaaaatgacctattaggggtgtttttcgga 128  Q
          ||||||||  ||||||||||||||||||||||    
T  2986075 aaaaatctgaaaattgcctattaggggtgtttttcgga 2986112  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 57; E-Value: 9e-24
Query Start/End: Original strand, 1 - 96
Target Start/End: Original strand, 15539928 - 15540024
Alignment:
Q  1 cccctattaaattttcggtttgatttgcaccctcgtaaaatttttattttccggtaaacacctttaatagaccattc-aaaaccaaaattttttgaa 96  Q
    ||||||| |||||||||||||||||||||||||||||||| ||||||||| ||| ||||||| |||||||  ||||| ||||||||||||| |||||    
T  15539928 cccctataaaattttcggtttgatttgcaccctcgtaaaaattttatttttcggaaaacacccttaataggtcattcaaaaaccaaaatttcttgaa 15540024  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 1 - 128
Target Start/End: Complemental strand, 5047402 - 5047266
Alignment:
Q  1 cccctattaaattttcggtttgatttgcaccctcgtaaaatttttattttccggtaaacacctttaatagaccattc-aaaaccaaaattttttgaa--- 96  Q
    ||||||| |||||||||||||||||||||||||| |||||  |||||||| ||| ||||||| ||||||| |||||| ||||||||||||| |||||       
T  5047402 cccctataaaattttcggtttgatttgcaccctcataaaaaatttatttttcggaaaacacccttaataggccattcaaaaaccaaaatttcttgaaaaa 5047303  T
Q  97 -----ctgaaaatgacctattaggggtgtttttcgga 128  Q
         ||||||||| ||||||||||| ||||||||||    
T  5047302 aaattctgaaaatggcctattaggggggtttttcgga 5047266  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 1 - 76
Target Start/End: Complemental strand, 8764134 - 8764059
Alignment:
Q  1 cccctattaaattttcggtttgatttgcaccctcgtaaaatttttattttccggtaaacacctttaatagaccatt 76  Q
    ||||||| |||||||||||||||||||||||||||||||||||||||||||||| |||||||  |||||| |||||    
T  8764134 cccctataaaattttcggtttgatttgcaccctcgtaaaatttttattttccggaaaacacccctaataggccatt 8764059  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 2 - 96
Target Start/End: Original strand, 21015291 - 21015386
Alignment:
Q  2 ccctattaaattttcggtttgatttgcaccctcgtaaaatttttattttccggtaaacacctttaatagaccattc-aaaaccaaaattttttgaa 96  Q
    |||||| |||||||||||||||||| |||||||||||| |||||||||||||  ||||||| ||||||| |||||| ||||||||||||| |||||    
T  21015291 ccctataaaattttcggtttgattttcaccctcgtaaactttttattttccgaaaaacacccttaataggccattcaaaaaccaaaatttcttgaa 21015386  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 1 - 76
Target Start/End: Complemental strand, 21015475 - 21015400
Alignment:
Q  1 cccctattaaattttcggtttgatttgcaccctcgtaaaatttttattttccggtaaacacctttaatagaccatt 76  Q
    ||||||| ||||||| |||||||||||||||||||||||||||||||||||||| |||||||| |||||| |||||    
T  21015475 cccctataaaatttttggtttgatttgcaccctcgtaaaatttttattttccggaaaacacctctaataggccatt 21015400  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 1 - 128
Target Start/End: Original strand, 32858202 - 32858338
Alignment:
Q  1 cccctattaaattttcggtttgatttgcaccctcgtaaaatttttattttccggtaaacacctttaatagaccattc-aaaaccaaaattttttgaa--- 96  Q
    ||||||| ||||||||||||||||||  ||||||||||||  |||||||||||| ||||||| ||||||| |||||| ||||||||||||| |||||       
T  32858202 cccctataaaattttcggtttgatttagaccctcgtaaaaaatttattttccggaaaacacccttaataggccattcaaaaaccaaaatttcttgaaaaa 32858301  T
Q  97 -----ctgaaaatgacctattaggggtgtttttcgga 128  Q
         ||||||||| ||||||||||||||||| ||||    
T  32858302 aaattctgaaaatggcctattaggggtgttttccgga 32858338  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 1 - 76
Target Start/End: Original strand, 38560066 - 38560141
Alignment:
Q  1 cccctattaaattttcggtttgatttgcaccctcgtaaaatttttattttccggtaaacacctttaatagaccatt 76  Q
    ||||||| |||||||||||||||||||||||||| ||||||||||||||||||| ||||||| ||||||| |||||    
T  38560066 cccctataaaattttcggtttgatttgcaccctcataaaatttttattttccggaaaacacccttaataggccatt 38560141  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 2 - 76
Target Start/End: Original strand, 12998749 - 12998823
Alignment:
Q  2 ccctattaaattttcggtttgatttgcaccctcgtaaaatttttattttccggtaaacacctttaatagaccatt 76  Q
    |||||| |||||||||||||||||||||||||||||||||||||||||||||| |||||||  |||||| |||||    
T  12998749 ccctataaaattttcggtttgatttgcaccctcgtaaaatttttattttccggaaaacacccctaataggccatt 12998823  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 4 - 123
Target Start/End: Complemental strand, 7014960 - 7014833
Alignment:
Q  4 ctattaaattttcggtttgatttgcaccctcgtaaaatttttattttccggtaaacacctttaatagacca-ttcaaaaccaaaattttttgaa------ 96  Q
    |||| |||||||||||||||||||||||||||||||||||||||||| |   ||||||| ||||||| ||| || ||||||||||||| |||||          
T  7014960 ctataaaattttcggtttgatttgcaccctcgtaaaatttttatttttcaaaaaacacccttaataggccatttaaaaaccaaaatttcttgaaaaaaat 7014861  T
Q  97 -ctgaaaatgacctattaggggtgtttt 123  Q
      ||||||||||||||||||||||||||    
T  7014860 tatgaaaatgacctattaggggtgtttt 7014833  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 4 - 96
Target Start/End: Complemental strand, 16871406 - 16871313
Alignment:
Q  4 ctattaaattttcggtttgatttgcaccctcgtaaaatttttattttccggtaaacacctttaatagaccattc-aaaaccaaaattttttgaa 96  Q
    |||| |||||||| ||||||||||||||||||||||||||||||||| ||| |||||||  |||||| |||||| ||||||||||||| |||||    
T  16871406 ctataaaattttcagtttgatttgcaccctcgtaaaatttttatttttcggaaaacacccctaataggccattcaaaaaccaaaatttcttgaa 16871313  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 9 - 96
Target Start/End: Complemental strand, 7862625 - 7862537
Alignment:
Q  9 aaattttcggtttgatttgcaccctcgtaaaatttttattttccggtaaacacctttaatagaccattc-aaaaccaaaattttttgaa 96  Q
    ||||||||||||| |||||||||||||||||||||||||||| ||  ||||||| ||||||| |||||| ||||||||||||| |||||    
T  7862625 aaattttcggtttaatttgcaccctcgtaaaatttttatttttcgaaaaacacccttaataggccattcaaaaaccaaaatttcttgaa 7862537  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 1 - 81
Target Start/End: Original strand, 37585686 - 37585766
Alignment:
Q  1 cccctattaaattttcggtttgatttgcaccctcgtaaaatttttattttccggtaaacacctttaatagaccattcaaaa 81  Q
    ||||||| ||||||||||||||||||||||| || ||||| ||||||||| ||| ||||||| ||||||||||||||||||    
T  37585686 cccctataaaattttcggtttgatttgcaccatcataaaaattttatttttcggaaaacacccttaatagaccattcaaaa 37585766  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 1 - 76
Target Start/End: Complemental strand, 9268808 - 9268733
Alignment:
Q  1 cccctattaaattttcggtttgatttgcaccctcgtaaaatttttattttccggtaaacacctttaatagaccatt 76  Q
    ||||||| ||||||||||||||||||||||||||||||| |||||||||||||| |||||||  |||||| |||||    
T  9268808 cccctataaaattttcggtttgatttgcaccctcgtaaattttttattttccggaaaacacccctaataggccatt 9268733  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 1 - 76
Target Start/End: Original strand, 16343686 - 16343761
Alignment:
Q  1 cccctattaaattttcggtttgatttgcaccctcgtaaaatttttattttccggtaaacacctttaatagaccatt 76  Q
    ||||||| |||||||||||||||||||||||||||||||| ||||||||||||| |||||||  |||||| |||||    
T  16343686 cccctataaaattttcggtttgatttgcaccctcgtaaaaattttattttccggaaaacacccctaataggccatt 16343761  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 1 - 123
Target Start/End: Original strand, 8127938 - 8128067
Alignment:
Q  1 cccctattaaattttcggtttgatttgcaccctcgtaaaatttttattttccggtaaacacctttaatagaccattc-aaaaccaaaattttttgaa--- 96  Q
    ||||||| |||||||||||||||||| |||||||| |||| |||||||||| || |||||||  |||||| |||||| ||||||||||||| || ||       
T  8127938 cccctataaaattttcggtttgatttacaccctcgaaaaaattttattttctggaaaacacccctaataggccattcaaaaaccaaaatttcttaaaaaa 8128037  T
Q  97 ---ctgaaaatgacctattaggggtgtttt 123  Q
       ||||||||| |||||||||||||||||    
T  8128038 attctgaaaatggcctattaggggtgtttt 8128067  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 4 - 96
Target Start/End: Original strand, 13207543 - 13207637
Alignment:
Q  4 ctattaaattttcggtttgatttgcaccctcgtaaaattttta-ttttccggtaaacacctttaatagaccattc-aaaaccaaaattttttgaa 96  Q
    |||| ||||||||||||||||||||| |||||||||||||||| ||||| || ||||||| ||||||| |||||| ||||||||||||| |||||    
T  13207543 ctataaaattttcggtttgatttgcatcctcgtaaaatttttatttttctggaaaacacccttaataggccattcaaaaaccaaaatttcttgaa 13207637  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 1 - 62
Target Start/End: Original strand, 7014779 - 7014840
Alignment:
Q  1 cccctattaaattttcggtttgatttgcaccctcgtaaaatttttattttccggtaaacacc 62  Q
    ||||||| |||||||||||||||||||||||||||||||||||||||||||| | |||||||    
T  7014779 cccctataaaattttcggtttgatttgcaccctcgtaaaatttttattttccagaaaacacc 7014840  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 1 - 128
Target Start/End: Complemental strand, 18546610 - 18546473
Alignment:
Q  1 cccctattaaattttcggtttgatttgcaccctcgtaaaatttttattttccggtaaacacctttaatagaccattc-aaaaccaaaattttttgaa--- 96  Q
    ||||||| |||||||| ||||||||| ||||||||||||| ||||||||||||| ||||| | |||||||  ||||| ||||||||||||| |||||       
T  18546610 cccctataaaattttcagtttgattttcaccctcgtaaaaattttattttccggaaaacatccttaatagggcattcaaaaaccaaaatttcttgaaaaa 18546511  T
Q  97 ------ctgaaaatgacctattaggggtgtttttcgga 128  Q
          ||||||||| |||||||||||| |||||||||    
T  18546510 aaaaatctgaaaatggcctattaggggtatttttcgga 18546473  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 3 - 76
Target Start/End: Original strand, 24721172 - 24721245
Alignment:
Q  3 cctattaaattttcggtttgatttgcaccctcgtaaaatttttattttccggtaaacacctttaatagaccatt 76  Q
    ||||| ||||||||||||||||||||||||||||||||   ||||||||||| ||||||||||||||| |||||    
T  24721172 cctataaaattttcggtttgatttgcaccctcgtaaaaaaattattttccggaaaacacctttaataggccatt 24721245  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 1 - 62
Target Start/End: Complemental strand, 37585870 - 37585809
Alignment:
Q  1 cccctattaaattttcggtttgatttgcaccctcgtaaaatttttattttccggtaaacacc 62  Q
    ||||||| |||||||||||||||||||||||||||||||||||||||||||| | |||||||    
T  37585870 cccctataaaattttcggtttgatttgcaccctcgtaaaatttttattttccagaaaacacc 37585809  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 4 - 96
Target Start/End: Complemental strand, 38560248 - 38560155
Alignment:
Q  4 ctattaaattttcggtttgatttgcaccctcgtaaaatttttattttccggtaaacacctttaatagaccattc-aaaaccaaaattttttgaa 96  Q
    |||| ||||||||| |||||||||||| || |||||| ||||||||||||| ||||||| ||||||| |||||| ||||||||||||| |||||    
T  38560248 ctataaaattttcgatttgatttgcactcttgtaaaaattttattttccggaaaacacccttaataggccattcaaaaaccaaaatttcttgaa 38560155  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 1 - 62
Target Start/End: Original strand, 39937066 - 39937127
Alignment:
Q  1 cccctattaaattttcggtttgatttgcaccctcgtaaaatttttattttccggtaaacacc 62  Q
    ||||||| ||||||||||||||||||||||||||||||||||||||||||| || |||||||    
T  39937066 cccctataaaattttcggtttgatttgcaccctcgtaaaatttttattttctggaaaacacc 39937127  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 1 - 53
Target Start/End: Original strand, 5047217 - 5047269
Alignment:
Q  1 cccctattaaattttcggtttgatttgcaccctcgtaaaatttttattttccg 53  Q
    ||||||| |||||||||||||||||||||||||||||||||||||||||||||    
T  5047217 cccctataaaattttcggtttgatttgcaccctcgtaaaatttttattttccg 5047269  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 1 - 96
Target Start/End: Original strand, 6019448 - 6019544
Alignment:
Q  1 cccctattaaattttcggtttgatttgcaccctcgtaaaatttttattttccggtaaacacctttaatagaccattc-aaaaccaaaattttttgaa 96  Q
    ||||||| ||||||||||||||||||||| ||||||||  ||||| | |||||| ||||||| ||||||| |||||| ||||||||||||| |||||    
T  6019448 cccctataaaattttcggtttgatttgcatcctcgtaatttttttttcttccggaaaacacccttaataggccattcaaaaaccaaaatttcttgaa 6019544  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 4 - 76
Target Start/End: Complemental strand, 11915073 - 11915001
Alignment:
Q  4 ctattaaattttcggtttgatttgcaccctcgtaaaatttttattttccggtaaacacctttaatagaccatt 76  Q
    |||| |||||||||||||||||||||||||||||||| ||||||||||||| |||||||  |||||| |||||    
T  11915073 ctataaaattttcggtttgatttgcaccctcgtaaaaattttattttccggaaaacacccctaataggccatt 11915001  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 12 - 76
Target Start/End: Original strand, 39825505 - 39825569
Alignment:
Q  12 ttttcggtttgatttgcaccctcgtaaaatttttattttccggtaaacacctttaatagaccatt 76  Q
    ||||||||||||||||||||||||||||||||||||||||||| |||||||  |||||| |||||    
T  39825505 ttttcggtttgatttgcaccctcgtaaaatttttattttccggaaaacacccctaataggccatt 39825569  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 11 - 123
Target Start/End: Original strand, 52866020 - 52866141
Alignment:
Q  11 attttcggtttgatttgcaccctcgtaaaatttttattttccggtaaacacctttaatagaccattc-aaaaccaaaattttttgaa--------ctgaa 101  Q
    ||||||||||||||||||||||||||||||   ||||||| ||| ||||||| ||||||| |||||| ||||||||||||| |||||        |||||    
T  52866020 attttcggtttgatttgcaccctcgtaaaaaaattatttttcggaaaacacccttaataggccattcaaaaaccaaaatttcttgaaaaaaaattctgaa 52866119  T
Q  102 aatgacctattaggggtgtttt 123  Q
    |||| |||||||||||||||||    
T  52866120 aatggcctattaggggtgtttt 52866141  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 1 - 123
Target Start/End: Original strand, 55120667 - 55120797
Alignment:
Q  1 cccctattaaattttcggtttgatttgcaccctcgtaaaatttttattttccggtaaacacctttaatagaccattc-aaaaccaaaattttttgaa--- 96  Q
    ||||||| |||||||| |||||||||||||| ||||||||  ||||||||||   ||||||| ||||||| |||||| ||||||||||||| |||||       
T  55120667 cccctataaaattttctgtttgatttgcaccatcgtaaaaaatttattttccaaaaaacacccttaataggccattcaaaaaccaaaatttcttgaaaaa 55120766  T
Q  97 ----ctgaaaatgacctattaggggtgtttt 123  Q
        ||||||||| |||||||||||||||||    
T  55120767 aattctgaaaatggcctattaggggtgtttt 55120797  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 1 - 76
Target Start/End: Complemental strand, 21802447 - 21802372
Alignment:
Q  1 cccctattaaattttcggtttgatttgcaccctcgtaaaatttttattttccggtaaacacctttaatagaccatt 76  Q
    ||||||| ||||||||||||||||||||||||| |||||| ||||||||| ||| |||||||| |||||| |||||    
T  21802447 cccctataaaattttcggtttgatttgcacccttgtaaaaattttatttttcggaaaacacctctaataggccatt 21802372  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 1 - 76
Target Start/End: Original strand, 25024973 - 25025048
Alignment:
Q  1 cccctattaaattttcggtttgatttgcaccctcgtaaaatttttattttccggtaaacacctttaatagaccatt 76  Q
    ||||||| ||||||||||||||||||| |||||||||||||||||||||||| | |||||||  |||||| |||||    
T  25024973 cccctataaaattttcggtttgatttggaccctcgtaaaatttttattttccagaaaacacccctaataggccatt 25025048  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 4 - 96
Target Start/End: Original strand, 26996075 - 26996165
Alignment:
Q  4 ctattaaattttcggtttgatttgcaccctcgtaaaatttttattttccggtaaacacctttaatagaccattc-aaaaccaaaattttttgaa 96  Q
    |||| |||||||||||||||||||||| ||||||||||||||||||||||| ||||||| |   ||| |||||| ||||||||||||| |||||    
T  26996075 ctataaaattttcggtttgatttgcacactcgtaaaatttttattttccggaaaacaccct---taggccattcaaaaaccaaaatttcttgaa 26996165  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 9 - 76
Target Start/End: Complemental strand, 26996247 - 26996180
Alignment:
Q  9 aaattttcggtttgatttgcaccctcgtaaaatttttattttccggtaaacacctttaatagaccatt 76  Q
    ||||||| ||||||||||||||| |||||||||||||||||||||| ||||||| ||||||| |||||    
T  26996247 aaatttttggtttgatttgcaccttcgtaaaatttttattttccggaaaacacccttaataggccatt 26996180  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #52
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 2 - 53
Target Start/End: Original strand, 54014608 - 54014659
Alignment:
Q  2 ccctattaaattttcggtttgatttgcaccctcgtaaaatttttattttccg 53  Q
    |||||| |||||||||||||||||||||||||||||||||||||||||||||    
T  54014608 ccctataaaattttcggtttgatttgcaccctcgtaaaatttttattttccg 54014659  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #53
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 9 - 76
Target Start/End: Complemental strand, 55120843 - 55120776
Alignment:
Q  9 aaattttcggtttgatttgcaccctcgtaaaatttttattttccggtaaacacctttaatagaccatt 76  Q
    |||||||||||||||||||||||||||||||||||||||||| ||| |||||||  |||||| |||||    
T  55120843 aaattttcggtttgatttgcaccctcgtaaaatttttatttttcggaaaacacccctaataggccatt 55120776  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #54
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 1 - 50
Target Start/End: Complemental strand, 13207731 - 13207682
Alignment:
Q  1 cccctattaaattttcggtttgatttgcaccctcgtaaaatttttatttt 50  Q
    ||||||| ||||||||||||||||||||||||||||||||||||||||||    
T  13207731 cccctataaaattttcggtttgatttgcaccctcgtaaaatttttatttt 13207682  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #55
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 11 - 76
Target Start/End: Complemental strand, 15540102 - 15540037
Alignment:
Q  11 attttcggtttgatttgcaccctcgtaaaatttttattttccggtaaacacctttaatagaccatt 76  Q
    |||||||||||||||||||||||||||||||| || |||| ||| ||||||||||||||| |||||    
T  15540102 attttcggtttgatttgcaccctcgtaaaattattttttttcggaaaacacctttaataggccatt 15540037  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #56
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 1 - 81
Target Start/End: Original strand, 19271669 - 19271748
Alignment:
Q  1 cccctattaaattttcggtttgatttgcaccctcgtaaaatttttattttccggtaaacacctttaatagaccattcaaaa 81  Q
    ||||||| |||||||| |||||||||||| |||||||||| ||||||||||||| ||||||  ||||||| ||||||||||    
T  19271669 cccctataaaattttctgtttgatttgcatcctcgtaaaa-ttttattttccggaaaacactcttaataggccattcaaaa 19271748  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #57
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 1 - 76
Target Start/End: Original strand, 3526589 - 3526664
Alignment:
Q  1 cccctattaaattttcggtttgatttgcaccctcgtaaaatttttattttccggtaaacacctttaatagaccatt 76  Q
    ||||||| ||||||||||||||||||||||||||||||||  |||||||||||  |||||||  |||||| |||||    
T  3526589 cccctataaaattttcggtttgatttgcaccctcgtaaaaaatttattttccgaaaaacacccctaataggccatt 3526664  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #58
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 1 - 52
Target Start/End: Complemental strand, 23043108 - 23043057
Alignment:
Q  1 cccctattaaattttcggtttgatttgcaccctcgtaaaatttttattttcc 52  Q
    ||||||| |||||||||||||||||| |||||||||||||||||||||||||    
T  23043108 cccctataaaattttcggtttgatttacaccctcgtaaaatttttattttcc 23043057  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #59
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 1 - 76
Target Start/End: Complemental strand, 52866195 - 52866120
Alignment:
Q  1 cccctattaaattttcggtttgatttgcaccctcgtaaaatttttattttccggtaaacacctttaatagaccatt 76  Q
    ||||||| |||||||||||||||||||  ||||||||||||||||||||||| | |||||||  |||||| |||||    
T  52866195 cccctataaaattttcggtttgatttgttccctcgtaaaatttttattttccagaaaacacccctaataggccatt 52866120  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #60
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 9 - 90
Target Start/End: Original strand, 8763957 - 8764039
Alignment:
Q  9 aaattttcggtttgatttgcaccctcgtaaaatttttattttccggtaaacacctttaatagaccattc-aaaaccaaaattt 90  Q
    ||||||||||||||||||  |||||||||||||||||||||||| | ||||| | |||||||  ||||| |||||||||||||    
T  8763957 aaattttcggtttgatttcaaccctcgtaaaatttttattttccagaaaacatccttaataggtcattcaaaaaccaaaattt 8764039  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #61
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 3 - 53
Target Start/End: Original strand, 18546426 - 18546476
Alignment:
Q  3 cctattaaattttcggtttgatttgcaccctcgtaaaatttttattttccg 53  Q
    ||||| |||||||||||||||||||||||||| ||||||||||||||||||    
T  18546426 cctataaaattttcggtttgatttgcaccctcataaaatttttattttccg 18546476  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #62
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 9 - 62
Target Start/End: Original strand, 7731328 - 7731381
Alignment:
Q  9 aaattttcggtttgatttgcaccctcgtaaaatttttattttccggtaaacacc 62  Q
    ||||||| | |||||||||||||||||||||||||||||||||||| |||||||    
T  7731328 aaatttttgatttgatttgcaccctcgtaaaatttttattttccggaaaacacc 7731381  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #63
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 1 - 62
Target Start/End: Complemental strand, 25484352 - 25484291
Alignment:
Q  1 cccctattaaattttcggtttgatttgcaccctcgtaaaatttttattttccggtaaacacc 62  Q
    ||||||| ||||||||| |||||||||||||||||||||| ||||||||||| | |||||||    
T  25484352 cccctataaaattttcgttttgatttgcaccctcgtaaaaattttattttccagaaaacacc 25484291  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #64
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 9 - 62
Target Start/End: Complemental strand, 40004102 - 40004049
Alignment:
Q  9 aaattttcggtttgatttgcaccctcgtaaaatttttattttccggtaaacacc 62  Q
    ||||||| | |||||||||||||||||||||||||||||||||||| |||||||    
T  40004102 aaatttttgatttgatttgcaccctcgtaaaatttttattttccggaaaacacc 40004049  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #65
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 1 - 62
Target Start/End: Original strand, 43674231 - 43674292
Alignment:
Q  1 cccctattaaattttcggtttgatttgcaccctcgtaaaatttttattttccggtaaacacc 62  Q
    ||||||| ||||||||||||||||||||||||| ||||||  |||||||||||| |||||||    
T  43674231 cccctataaaattttcggtttgatttgcacccttgtaaaaaatttattttccggaaaacacc 43674292  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #66
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 9 - 128
Target Start/End: Original strand, 33312390 - 33312521
Alignment:
Q  9 aaattttcggtttgatttgcaccctcgtaaaat---ttttattttccggtaaacacctttaatagaccattc-aaaaccaaaattttttgaa-------- 96  Q
    |||||||||||||||||| || ||||||||| |   |||| |||||||| ||||||| ||||||| |||||| ||||||||||||| |||||            
T  33312390 aaattttcggtttgatttacatcctcgtaaattttatttttttttccggaaaacacccttaataggccattcaaaaaccaaaatttcttgaaaaaaaatt 33312489  T
Q  97 ctgaaaatgacctattaggggtgtttttcgga 128  Q
    ||||||||| ||||||| ||||||||||||||    
T  33312490 ctgaaaatggcctattaagggtgtttttcgga 33312521  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #67
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 1 - 96
Target Start/End: Original strand, 40717406 - 40717502
Alignment:
Q  1 cccctattaaattttcggtttgatttgcaccctcgtaaaatttttattttccggtaaacacctttaatagaccattc-aaaaccaaaattttttgaa 96  Q
    ||||||| || ||||  |||||||| || ||||||||||| ||||||||| ||| ||||||| ||||||| |||||| ||||||||||||| |||||    
T  40717406 cccctataaatttttttgtttgattagctccctcgtaaaaattttatttttcggaaaacacccttaataggccattcaaaaaccaaaatttcttgaa 40717502  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #68
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 4 - 96
Target Start/End: Original strand, 53049981 - 53050076
Alignment:
Q  4 ctattaaattttcggtttgatttgcaccctcgtaaaatt--tttattttccggtaaacacctttaatagaccattc-aaaaccaaaattttttgaa 96  Q
    |||| ||||||||||||||||||||| ||| ||||||||  ||| ||||| || ||||||| ||||||| |||||| ||||||||||||| |||||    
T  53049981 ctataaaattttcggtttgatttgcatcctagtaaaatttattttttttcaggaaaacacccttaataggccattcaaaaaccaaaatttcttgaa 53050076  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #69
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 9 - 76
Target Start/End: Original strand, 2148578 - 2148645
Alignment:
Q  9 aaattttcggtttgatttgcaccctcgtaaaatttttattttccggtaaacacctttaatagaccatt 76  Q
    |||||||| ||||||||||||||||| ||||| ||||||||||||| ||||||  ||||||| |||||    
T  2148578 aaattttcagtttgatttgcaccctcataaaaattttattttccggaaaacactcttaataggccatt 2148645  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #70
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 1 - 76
Target Start/End: Complemental strand, 33312570 - 33312495
Alignment:
Q  1 cccctattaaattttcggtttgatttgcaccctcgtaaaatttttattttccggtaaacacctttaatagaccatt 76  Q
    ||||||| |||||||||||||||||||   | |||||||||||||||||||||  ||||||| ||||||| |||||    
T  33312570 cccctataaaattttcggtttgatttgtgtcatcgtaaaatttttattttccgaaaaacacccttaataggccatt 33312495  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #71
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 2 - 76
Target Start/End: Complemental strand, 49817832 - 49817758
Alignment:
Q  2 ccctattaaattttcggtttgatttgcaccctcgtaaaatttttattttccggtaaacacctttaatagaccatt 76  Q
    |||||| ||||||||||||||||||||| |||||||||| ||||||||| | | |||||||  |||||| |||||    
T  49817832 ccctataaaattttcggtttgatttgcatcctcgtaaaaattttatttttcagaaaacacccctaataggccatt 49817758  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #72
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 1 - 62
Target Start/End: Complemental strand, 2986161 - 2986100
Alignment:
Q  1 cccctattaaattttcggtttgatttgcaccctcgtaaaatttttattttccggtaaacacc 62  Q
    ||||||| ||||||||||||||||||||||||||||||||   ||||||||||  |||||||    
T  2986161 cccctataaaattttcggtttgatttgcaccctcgtaaaaaaattattttccgaaaaacacc 2986100  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #73
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 9 - 76
Target Start/End: Complemental strand, 6019625 - 6019558
Alignment:
Q  9 aaattttcggtttgatttgcaccctcgtaaaatttttattttccggtaaacacctttaatagaccatt 76  Q
    ||||| |||||||||||||   |||| ||||||||||||||||||| ||||||| ||||||| |||||    
T  6019625 aaattctcggtttgatttgtgtcctcataaaatttttattttccggaaaacacccttaataggccatt 6019558  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #74
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 1 - 92
Target Start/End: Complemental strand, 24234242 - 24234148
Alignment:
Q  1 cccctattaaattttcggtttgatttgcaccctcgtaaaattt--ttattttccggtaaacacctttaatagaccattc-aaaaccaaaattttt 92  Q
    ||||||| ||||||||||||| ||||||||||| | ||  |||  || |||||||| ||||||| ||||||| |||||| |||||||||||||||    
T  24234242 cccctataaaattttcggttttatttgcacccttgaaattttttctttttttccggaaaacacccttaataggccattcaaaaaccaaaattttt 24234148  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #75
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 1 - 38
Target Start/End: Complemental strand, 32858392 - 32858355
Alignment:
Q  1 cccctattaaattttcggtttgatttgcaccctcgtaa 38  Q
    ||||||| ||||||||||||||||||||||||||||||    
T  32858392 cccctataaaattttcggtttgatttgcaccctcgtaa 32858355  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #76
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 2 - 39
Target Start/End: Original strand, 40703021 - 40703058
Alignment:
Q  2 ccctattaaattttcggtttgatttgcaccctcgtaaa 39  Q
    |||||| |||||||||||||||||||||||||||||||    
T  40703021 ccctataaaattttcggtttgatttgcaccctcgtaaa 40703058  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #77
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 1 - 62
Target Start/End: Original strand, 40810811 - 40810872
Alignment:
Q  1 cccctattaaattttcggtttgatttgcaccctcgtaaaatttttattttccggtaaacacc 62  Q
    ||||||| ||||||||||||||| ||||| ||| |||||| |||| |||||||| |||||||    
T  40810811 cccctataaaattttcggtttgaattgcatccttgtaaaactttttttttccggaaaacacc 40810872  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #78
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 1 - 62
Target Start/End: Original strand, 40815711 - 40815772
Alignment:
Q  1 cccctattaaattttcggtttgatttgcaccctcgtaaaatttttattttccggtaaacacc 62  Q
    ||||||| ||||||||||||||| ||||| ||| |||||| |||| |||||||| |||||||    
T  40815711 cccctataaaattttcggtttgaattgcatccttgtaaaactttttttttccggaaaacacc 40815772  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #79
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 4 - 76
Target Start/End: Complemental strand, 8128118 - 8128046
Alignment:
Q  4 ctattaaattttcggtttgatttgcaccctcgtaaaatttttattttccggtaaacacctttaatagaccatt 76  Q
    |||| ||||||||||||||||||||||||||||||| | ||  ||||| || |||||||  |||||| |||||    
T  8128118 ctataaaattttcggtttgatttgcaccctcgtaaattattatttttctggaaaacacccctaataggccatt 8128046  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #80
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 9 - 52
Target Start/End: Complemental strand, 6122619 - 6122576
Alignment:
Q  9 aaattttcggtttgatttgcaccctcgtaaaatttttattttcc 52  Q
    ||||||||||||||||||||| |||||||||| |||| ||||||    
T  6122619 aaattttcggtttgatttgcatcctcgtaaaactttttttttcc 6122576  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #81
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 1 - 44
Target Start/End: Original strand, 7862450 - 7862493
Alignment:
Q  1 cccctattaaattttcggtttgatttgcaccctcgtaaaatttt 44  Q
    ||||||| ||| ||| ||||||||||||||||||||||||||||    
T  7862450 cccctataaaaattttggtttgatttgcaccctcgtaaaatttt 7862493  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #82
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 2 - 41
Target Start/End: Complemental strand, 40717593 - 40717554
Alignment:
Q  2 ccctattaaattttcggtttgatttgcaccctcgtaaaat 41  Q
    |||||| ||||||||||||||||||||||||| |||||||    
T  40717593 ccctataaaattttcggtttgatttgcacccttgtaaaat 40717554  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #83
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 11 - 76
Target Start/End: Original strand, 5154757 - 5154823
Alignment:
Q  11 attttcggtttgatttgcaccctcgt-aaaatttttattttccggtaaacacctttaatagaccatt 76  Q
    ||||||||||||||||||||||| || |||| ||||||||| ||| |||||||  |||||| |||||    
T  5154757 attttcggtttgatttgcacccttgtaaaaaattttatttttcggaaaacacccctaataggccatt 5154823  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #84
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 9 - 39
Target Start/End: Complemental strand, 51660233 - 51660203
Alignment:
Q  9 aaattttcggtttgatttgcaccctcgtaaa 39  Q
    |||||||||||||||||||||||||||||||    
T  51660233 aaattttcggtttgatttgcaccctcgtaaa 51660203  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #85
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 38
Target Start/End: Original strand, 16871222 - 16871259
Alignment:
Q  1 cccctattaaattttcggtttgatttgcaccctcgtaa 38  Q
    ||||||| |||||||| |||||||||||||||||||||    
T  16871222 cccctataaaattttctgtttgatttgcaccctcgtaa 16871259  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #86
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 62
Target Start/End: Original strand, 38441036 - 38441097
Alignment:
Q  1 cccctattaaattttcggtttgatttgcaccctcgtaaaatttttattttccggtaaacacc 62  Q
    ||||||| ||||||||||||||| ||||| ||| |||||| |||| |||||||  |||||||    
T  38441036 cccctataaaattttcggtttgaattgcatccttgtaaaactttttttttccgaaaaacacc 38441097  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #87
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 9 - 62
Target Start/End: Complemental strand, 38442218 - 38442165
Alignment:
Q  9 aaattttcggtttgatttgcaccctcgtaaaatttttattttccggtaaacacc 62  Q
    ||||||||||||||| ||||| ||| |||||| |||| |||||||| |||||||    
T  38442218 aaattttcggtttgaattgcatccttgtaaaactttttttttccggaaaacacc 38442165  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #88
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 9 - 62
Target Start/End: Complemental strand, 40816948 - 40816895
Alignment:
Q  9 aaattttcggtttgatttgcaccctcgtaaaatttttattttccggtaaacacc 62  Q
    ||||||||||||||| ||||| ||| |||||| |||| |||||||| |||||||    
T  40816948 aaattttcggtttgaattgcatccttgtaaaactttttttttccggaaaacacc 40816895  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #89
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 12 - 96
Target Start/End: Original strand, 41227263 - 41227346
Alignment:
Q  12 ttttcggtttgatttgcaccctcgtaaaatttttattttccggtaaacacctttaatagaccattc-aaaaccaaaattttttgaa 96  Q
    |||||||||||||||||| || | ||||||||||||||||||  ||||| | |||| || |||||| ||||||||||||| |||||    
T  41227263 ttttcggtttgatttgcatcc-cataaaatttttattttccgtaaaaca-cattaacaggccattcaaaaaccaaaatttcttgaa 41227346  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #90
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 49
Target Start/End: Complemental strand, 48629529 - 48629480
Alignment:
Q  1 cccctattaaattttcggtttgatttgcaccctcgtaaaa-tttttattt 49  Q
    ||||||| ||||||||||||||||||||| ||| |||||| |||||||||    
T  48629529 cccctataaaattttcggtttgatttgcatccttgtaaaactttttattt 48629480  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #91
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 2 - 39
Target Start/End: Original strand, 53034928 - 53034965
Alignment:
Q  2 ccctattaaattttcggtttgatttgcaccctcgtaaa 39  Q
    |||||| ||||||| |||||||||||||||||||||||    
T  53034928 ccctataaaatttttggtttgatttgcaccctcgtaaa 53034965  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #92
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 2 - 50
Target Start/End: Complemental strand, 38641323 - 38641275
Alignment:
Q  2 ccctattaaattttcggtttgatttgcaccctcgtaaaatttttatttt 50  Q
    |||||| ||||||||||||||||||||| ||| |||||| |||| ||||    
T  38641323 ccctataaaattttcggtttgatttgcatccttgtaaaacttttttttt 38641275  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0049 (Bit Score: 76; Significance: 4e-35; HSPs: 3)
Name: scaffold0049
Description:

Target: scaffold0049; HSP #1
Raw Score: 76; E-Value: 4e-35
Query Start/End: Original strand, 1 - 96
Target Start/End: Complemental strand, 62320 - 62225
Alignment:
Q  1 cccctattaaattttcggtttgatttgcaccctcgtaaaatttttattttccggtaaacacctttaatagaccattcaaaaccaaaattttttgaa 96  Q
    ||||||| |||||||||||||||||||||||||||||||||||||||||||||| ||||||| ||||||| ||||||||||||||||||| |||||    
T  62320 cccctataaaattttcggtttgatttgcaccctcgtaaaatttttattttccggaaaacacccttaataggccattcaaaaccaaaatttcttgaa 62225  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0049; HSP #2
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 1 - 96
Target Start/End: Complemental strand, 57624 - 57528
Alignment:
Q  1 cccctattaaattttcggtttgatttgcaccctcgtaaaatttttattttccggtaaacacctttaatagaccattc-aaaaccaaaattttttgaa 96  Q
    ||||||| |||||||||||||||||||||||||||||||| ||||||||||||| ||||||| |||||||  ||||| ||||||||||||| |||||    
T  57624 cccctataaaattttcggtttgatttgcaccctcgtaaaaattttattttccggaaaacacccttaataggtcattcaaaaaccaaaatttcttgaa 57528  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0049; HSP #3
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 1 - 62
Target Start/End: Original strand, 57440 - 57501
Alignment:
Q  1 cccctattaaattttcggtttgatttgcaccctcgtaaaatttttattttccggtaaacacc 62  Q
    ||||||| |||||||||||||||||||||||||||||||||||||||||| ||| |||||||    
T  57440 cccctataaaattttcggtttgatttgcaccctcgtaaaatttttatttttcggaaaacacc 57501  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 76; Significance: 4e-35; HSPs: 65)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 76; E-Value: 4e-35
Query Start/End: Original strand, 1 - 128
Target Start/End: Original strand, 2965622 - 2965758
Alignment:
Q  1 cccctattaaattttcggtttgatttgcaccctcgtaaaatttttattttccggtaaacacctttaatagaccattc-aaaaccaaaattttttgaa--- 96  Q
    ||||||| |||||||||||||||||||||||||||||||||||||||||||||| ||||||| ||||||| |||||| ||||||||||||| |||||       
T  2965622 cccctataaaattttcggtttgatttgcaccctcgtaaaatttttattttccggaaaacacccttaataggccattcaaaaaccaaaatttcttgaaaaa 2965721  T
Q  97 -----ctgaaaatgacctattaggggtgtttttcgga 128  Q
         ||||||||| ||||||||||||||||||||||    
T  2965722 aaattctgaaaatggcctattaggggtgtttttcgga 2965758  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 69; E-Value: 6e-31
Query Start/End: Original strand, 1 - 96
Target Start/End: Original strand, 4407918 - 4408014
Alignment:
Q  1 cccctattaaattttcggtttgatttgcaccctcgtaaaatttttattttccggtaaacacctttaatagaccattc-aaaaccaaaattttttgaa 96  Q
    ||||||| |||||||||||||||||||||||||||||||||||||||||||||| ||||||| ||||||| |||||| ||||||||||||| |||||    
T  4407918 cccctataaaattttcggtttgatttgcaccctcgtaaaatttttattttccggaaaacacccttaataggccattcaaaaaccaaaatttcttgaa 4408014  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 1 - 128
Target Start/End: Complemental strand, 19591535 - 19591399
Alignment:
Q  1 cccctattaaattttcggtttgatttgcaccctcgtaaaatttttattttccggtaaacacctttaatagaccattc-aaaaccaaaattttttgaa--- 96  Q
    ||||||| |||||||||||||||||||||||||||||||| ||||||||||||| ||||||| ||||||| |||||| ||||||||||||| |||||       
T  19591535 cccctataaaattttcggtttgatttgcaccctcgtaaaaattttattttccggaaaacacccttaataggccattcaaaaaccaaaatttcttgaaaaa 19591436  T
Q  97 -----ctgaaaatgacctattaggggtgtttttcgga 128  Q
         ||||||||| ||||||||||||||||| ||||    
T  19591435 aaattctgaaaatggcctattaggggtgttttccgga 19591399  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 1 - 123
Target Start/End: Original strand, 9964403 - 9964534
Alignment:
Q  1 cccctattaaattttcggtttgatttgcaccctcgtaaaatttttattttccggtaaacacctttaatagaccattc-aaaaccaaaattttttgaa--- 96  Q
    ||||||| |||||||| |||||||||||||||| |||||||||||||||||||| ||||||| ||||||| |||||| ||||||||||||| |||||       
T  9964403 cccctataaaattttcagtttgatttgcacccttgtaaaatttttattttccggaaaacacccttaataggccattctaaaaccaaaatttattgaaaaa 9964502  T
Q  97 -----ctgaaaatgacctattaggggtgtttt 123  Q
         ||||||||| |||||||||||||||||    
T  9964503 aaattctgaaaatggcctattaggggtgtttt 9964534  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 9 - 96
Target Start/End: Complemental strand, 1414816 - 1414728
Alignment:
Q  9 aaattttcggtttgatttgcaccctcgtaaaatttttattttccggtaaacacctttaatagaccattc-aaaaccaaaattttttgaa 96  Q
    ||||||||||||||||||||| |||||||||| ||||||||||||| ||||||| ||||||| |||||| |||||||||||||||||||    
T  1414816 aaattttcggtttgatttgcatcctcgtaaaaattttattttccggaaaacacccttaataggccattcaaaaaccaaaattttttgaa 1414728  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 1 - 96
Target Start/End: Complemental strand, 30240800 - 30240704
Alignment:
Q  1 cccctattaaattttcggtttgatttgcaccctcgtaaaatttttattttccggtaaacacctttaatagaccattc-aaaaccaaaattttttgaa 96  Q
    ||||||| |||||||||||||||||||||||||||||||| ||||||||||||| ||||||  ||||||| |||||| ||||||||||||| |||||    
T  30240800 cccctataaaattttcggtttgatttgcaccctcgtaaaaattttattttccggaaaacacacttaataggccattcaaaaaccaaaatttcttgaa 30240704  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 4 - 90
Target Start/End: Original strand, 2039350 - 2039437
Alignment:
Q  4 ctattaaattttcggtttgatttgcaccctcgtaaaatttttattttccggtaaacacctttaatagaccattc-aaaaccaaaattt 90  Q
    |||| |||||||| ||||||||||||||||||||||||||||||||||||| ||||||| ||||||| |||||| |||||||||||||    
T  2039350 ctataaaattttcagtttgatttgcaccctcgtaaaatttttattttccggaaaacacccttaataggccattcaaaaaccaaaattt 2039437  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 1 - 128
Target Start/End: Original strand, 2255413 - 2255549
Alignment:
Q  1 cccctattaaattttcggtttgatttgcaccctcgtaaaatttttattttccggtaaacacctttaatagaccattc-aaaaccaaaattttttgaa--- 96  Q
    ||||||| |||||||| ||||||||||||||||||||||| ||||||||||| | ||||||| ||||||| |||||| ||||||||||||| |||||       
T  2255413 cccctataaaattttcagtttgatttgcaccctcgtaaaaattttattttccagaaaacacccttaataggccattcaaaaaccaaaatttcttgaaaaa 2255512  T
Q  97 -----ctgaaaatgacctattaggggtgtttttcgga 128  Q
         ||||||||| ||||||||||||||||| ||||    
T  2255513 aaattctgaaaatggcctattaggggtgttttccgga 2255549  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 59; E-Value: 6e-25
Query Start/End: Original strand, 1 - 87
Target Start/End: Original strand, 18699049 - 18699135
Alignment:
Q  1 cccctattaaattttcggtttgatttgcaccctcgtaaaatttttattttccggtaaacacctttaatagaccattcaaaaccaaaa 87  Q
    ||||||| |||||||||||||||||| ||||||||||||||||||||||| ||| ||||||| ||||||| |||||||||| |||||    
T  18699049 cccctataaaattttcggtttgatttacaccctcgtaaaatttttatttttcggaaaacacccttaataggccattcaaaaacaaaa 18699135  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 59; E-Value: 6e-25
Query Start/End: Original strand, 1 - 123
Target Start/End: Original strand, 27660424 - 27660555
Alignment:
Q  1 cccctattaaattttcggtttgatttgcaccctcgtaaaatttttattttccggtaaacacctttaatagaccattc-aaaaccaaaattttttgaa--- 96  Q
    ||||||| ||||||||||||||||||||| |||||||||| ||||||||||||| ||||||| ||||||| |||||| |||||||||| || |||||       
T  27660424 cccctataaaattttcggtttgatttgcatcctcgtaaaaattttattttccggaaaacacccttaataggccattcaaaaaccaaaaattcttgaaaga 27660523  T
Q  97 -----ctgaaaatgacctattaggggtgtttt 123  Q
         ||||||||| |||||||||||||||||    
T  27660524 aaattctgaaaatggcctattaggggtgtttt 27660555  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 59; E-Value: 6e-25
Query Start/End: Original strand, 1 - 123
Target Start/End: Original strand, 28038944 - 28039075
Alignment:
Q  1 cccctattaaattttcggtttgatttgcaccctcgtaaaatttttattttccggtaaacacctttaatagaccattc-aaaaccaaaattttttgaa--- 96  Q
    ||||||| |||||||||||||||||||||| ||||||||||||||||||| ||  ||||||| |||||||  ||||| |||||||||||||||||||       
T  28038944 cccctataaaattttcggtttgatttgcacactcgtaaaatttttatttttcgaaaaacacccttaataggtcattcaaaaaccaaaattttttgaaaaa 28039043  T
Q  97 -----ctgaaaatgacctattaggggtgtttt 123  Q
         ||||||||| |||||||||||||||||    
T  28039044 aaattctgaaaatggcctattaggggtgtttt 28039075  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 4 - 123
Target Start/End: Complemental strand, 6176924 - 6176797
Alignment:
Q  4 ctattaaattttcggtttgatttgcaccctcgtaaaatttttattttccggtaaacacctttaatagaccattc-aaaaccaaaattttttgaa------ 96  Q
    |||| |||||||||||||||||||||||||||||||| ||||||||| | | ||||||| ||||||| |||||| ||||||||||||| |||||          
T  6176924 ctataaaattttcggtttgatttgcaccctcgtaaaaattttatttttcagaaaacacccttaataggccattcaaaaaccaaaatttcttgaaaaaaaa 6176825  T
Q  97 -ctgaaaatgacctattaggggtgtttt 123  Q
     ||||||||| |||||||||||||||||    
T  6176824 tctgaaaatggcctattaggggtgtttt 6176797  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 57; E-Value: 9e-24
Query Start/End: Original strand, 4 - 128
Target Start/End: Original strand, 25948681 - 25948814
Alignment:
Q  4 ctattaaattttcggtttgatttgcaccctcgtaaaatttttattttccggtaaacacctttaatagaccattc-aaaaccaaaattttttgaa------ 96  Q
    |||| ||||||||||||||| || ||||||||||||||||||||||||| | ||||||| ||||||| |||||| ||||||||||||| |||||          
T  25948681 ctataaaattttcggtttgaatttcaccctcgtaaaatttttattttccagaaaacacccttaataggccattcaaaaaccaaaatttcttgaaaaaaaa 25948780  T
Q  97 --ctgaaaatgacctattaggggtgtttttcgga 128  Q
      ||||||||| ||||||||||||||||| ||||    
T  25948781 ttctgaaaatggcctattaggggtgttttccgga 25948814  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 1 - 76
Target Start/End: Complemental strand, 2255598 - 2255523
Alignment:
Q  1 cccctattaaattttcggtttgatttgcaccctcgtaaaatttttattttccggtaaacacctttaatagaccatt 76  Q
    ||||||| |||||||||||||||||||||||||||||||||||||||||||||| |||||||  |||||| |||||    
T  2255598 cccctataaaattttcggtttgatttgcaccctcgtaaaatttttattttccggaaaacacccctaataggccatt 2255523  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 3 - 123
Target Start/End: Complemental strand, 9887885 - 9887757
Alignment:
Q  3 cctattaaattttcggtttgatttgcaccctcgtaaaatttttattttccggtaaacacctttaatagaccattc-aaaaccaaaattttttgaa----- 96  Q
    ||||| |||||||||||||||||| ||||||| ||||||||||||||||||| ||||||| |||||||  ||||| ||||||||||||| || ||         
T  9887885 cctataaaattttcggtttgatttccaccctcataaaatttttattttccggaaaacacccttaataggtcattcaaaaaccaaaatttcttaaaaaaaa 9887786  T
Q  97 --ctgaaaatgacctattaggggtgtttt 123  Q
      ||||||||| |||||||||||||||||    
T  9887785 ttctgaaaatggcctattaggggtgtttt 9887757  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 9 - 96
Target Start/End: Original strand, 7850557 - 7850645
Alignment:
Q  9 aaattttcggtttgatttgcaccctcgtaaaatttttattttccggtaaacacctttaatagaccattc-aaaaccaaaattttttgaa 96  Q
    ||||||||||||||| ||||||||| ||||||||||||||||| || ||||||| ||||||| |||||| ||||||||||||| |||||    
T  7850557 aaattttcggtttgacttgcacccttgtaaaatttttattttctggaaaacacccttaataggccattcaaaaaccaaaatttcttgaa 7850645  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 1 - 96
Target Start/End: Original strand, 26908301 - 26908397
Alignment:
Q  1 cccctattaaattttcggtttgatttgcaccctcgtaaaatttttattttccggtaaacacctttaatagaccattc-aaaaccaaaattttttgaa 96  Q
    ||||||| ||||||||| |||||||||||||||||||||| |||||||||| |  ||||||| ||||||| |||||| ||||||||||||| |||||    
T  26908301 cccctataaaattttcgttttgatttgcaccctcgtaaaaattttattttcagaaaaacacccttaataggccattcaaaaaccaaaatttcttgaa 26908397  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 1 - 76
Target Start/End: Complemental strand, 2965807 - 2965732
Alignment:
Q  1 cccctattaaattttcggtttgatttgcaccctcgtaaaatttttattttccggtaaacacctttaatagaccatt 76  Q
    ||||||| |||||||||||||||||||||||||||||||||||||||||||||  |||||||  |||||| |||||    
T  2965807 cccctataaaattttcggtttgatttgcaccctcgtaaaatttttattttccgaaaaacacccctaataggccatt 2965732  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 1 - 76
Target Start/End: Complemental strand, 4408103 - 4408028
Alignment:
Q  1 cccctattaaattttcggtttgatttgcaccctcgtaaaatttttattttccggtaaacacctttaatagaccatt 76  Q
    ||||||| |||||||||||||||||||||||||||||||||||||||||||| | |||||||  |||||| |||||    
T  4408103 cccctataaaattttcggtttgatttgcaccctcgtaaaatttttattttccagaaaacaccactaataggccatt 4408028  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 1 - 76
Target Start/End: Complemental strand, 9964588 - 9964513
Alignment:
Q  1 cccctattaaattttcggtttgatttgcaccctcgtaaaatttttattttccggtaaacacctttaatagaccatt 76  Q
    ||||||| ||||||||||||||||||||||||||||||||||||||||||| || |||||||  |||||| |||||    
T  9964588 cccctataaaattttcggtttgatttgcaccctcgtaaaatttttattttctggaaaacacccctaataggccatt 9964513  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 1 - 76
Target Start/End: Complemental strand, 16127343 - 16127268
Alignment:
Q  1 cccctattaaattttcggtttgatttgcaccctcgtaaaatttttattttccggtaaacacctttaatagaccatt 76  Q
    ||||||| |||||||||||||||||||||||||||||||||||||||||||| | |||||||  |||||| |||||    
T  16127343 cccctataaaattttcggtttgatttgcaccctcgtaaaatttttattttccagaaaacacccctaataggccatt 16127268  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 1 - 76
Target Start/End: Original strand, 19591350 - 19591425
Alignment:
Q  1 cccctattaaattttcggtttgatttgcaccctcgtaaaatttttattttccggtaaacacctttaatagaccatt 76  Q
    ||||||| |||||||||||||||||||||||||| ||||||||||||||||||| |||||||  |||||| |||||    
T  19591350 cccctataaaattttcggtttgatttgcaccctcataaaatttttattttccggaaaacacccctaataggccatt 19591425  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 1 - 76
Target Start/End: Complemental strand, 22043750 - 22043675
Alignment:
Q  1 cccctattaaattttcggtttgatttgcaccctcgtaaaatttttattttccggtaaacacctttaatagaccatt 76  Q
    ||||||| ||||||||||||||||||||||||| |||||||||||||||||||| |||||||  |||||| |||||    
T  22043750 cccctataaaattttcggtttgatttgcacccttgtaaaatttttattttccggaaaacacccctaataggccatt 22043675  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 1 - 76
Target Start/End: Complemental strand, 25948863 - 25948788
Alignment:
Q  1 cccctattaaattttcggtttgatttgcaccctcgtaaaatttttattttccggtaaacacctttaatagaccatt 76  Q
    ||||||| ||||||||||||||||| |||||||||||||||||||||||||||| |||||||  |||||| |||||    
T  25948863 cccctataaaattttcggtttgattggcaccctcgtaaaatttttattttccggaaaacacccctaataggccatt 25948788  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 1 - 128
Target Start/End: Complemental strand, 32276321 - 32276185
Alignment:
Q  1 cccctattaaattttcggtttgatttgcaccctcgtaaaatttttattttccggtaaacacctttaatagaccattc-aaaaccaaaattttttgaa--- 96  Q
    ||||||| ||||||||||||||||||| ||| ||||||||  |||||||||| | ||||||| ||| ||| |||||| ||||||||||||| |||||       
T  32276321 cccctataaaattttcggtttgatttggaccatcgtaaaaaatttattttccagaaaacacccttattaggccattcaaaaaccaaaatttcttgaaaaa 32276222  T
Q  97 -----ctgaaaatgacctattaggggtgtttttcgga 128  Q
         ||||||||| ||||||||||||||||||||||    
T  32276221 aaattctgaaaatggcctattaggggtgtttttcgga 32276185  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 1 - 96
Target Start/End: Complemental strand, 15502763 - 15502667
Alignment:
Q  1 cccctattaaattttcggtttgatttgcaccctcgtaaaatttttattttccggtaaacacctttaatagaccattc--aaaaccaaaattttttgaa 96  Q
    ||||||| |||||||| ||||||||||||||||||||||| ||||||||||| | ||||||||||||||  ||||||  ||||||||||||| |||||    
T  15502763 cccctataaaattttcagtttgatttgcaccctcgtaaaaattttattttcc-gaaaacacctttaataagccattcaaaaaaccaaaatttcttgaa 15502667  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 1 - 81
Target Start/End: Complemental strand, 7314763 - 7314683
Alignment:
Q  1 cccctattaaattttcggtttgatttgcaccctcgtaaaatttttattttccggtaaacacctttaatagaccattcaaaa 81  Q
    ||||||| ||||||||||||||||||||||||| ||||||  |||||||||||| |||| || ||||||| ||||||||||    
T  7314763 cccctataaaattttcggtttgatttgcacccttgtaaaaaatttattttccggaaaactcccttaataggccattcaaaa 7314683  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 1 - 96
Target Start/End: Original strand, 9865079 - 9865175
Alignment:
Q  1 cccctattaaattttcggtttgatttgcaccctcgtaaaatttttattttccggtaaacacctttaatagaccattc-aaaaccaaaattttttgaa 96  Q
    ||||||| ||||||||||||||||||||||||||||||||  ||||||||||   ||||||  ||||||| |||||| ||||||||||||| |||||    
T  9865079 cccctataaaattttcggtttgatttgcaccctcgtaaaaaatttattttccttaaaacactcttaataggccattcaaaaaccaaaatttcttgaa 9865175  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 3 - 70
Target Start/End: Complemental strand, 21383955 - 21383888
Alignment:
Q  3 cctattaaattttcggtttgatttgcaccctcgtaaaatttttattttccggtaaacacctttaatag 70  Q
    ||||| |||||||| ||||||||| ||||||||||||||||||||||||||| ||||||| |||||||    
T  21383955 cctataaaattttcagtttgattttcaccctcgtaaaatttttattttccggaaaacacccttaatag 21383888  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 1 - 76
Target Start/End: Complemental strand, 26908488 - 26908413
Alignment:
Q  1 cccctattaaattttcggtttgatttgcaccctcgtaaaatttttattttccggtaaacacctttaatagaccatt 76  Q
    ||||||| ||||||||||||||||||||||||||||||||  |||||||||||| |||||||  |||||| |||||    
T  26908488 cccctataaaattttcggtttgatttgcaccctcgtaaaaaatttattttccggaaaacacccctaataggccatt 26908413  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 2 - 123
Target Start/End: Original strand, 34204795 - 34204924
Alignment:
Q  2 ccctattaaattttcggtttgatttgcaccctcgtaaaatttttattttccggtaaacacctttaatagaccattc-aaaaccaaaattttttgaa---- 96  Q
    |||||| ||||||||||||| |||||||||| |||||||  |||||||| ||| ||||||| |||||||  ||||| ||||||||||||| |||||        
T  34204795 ccctataaaattttcggtttaatttgcacccacgtaaaaaatttatttttcggaaaacacccttaataggtcattcaaaaaccaaaatttcttgaaaaaa 34204894  T
Q  97 ---ctgaaaatgacctattaggggtgtttt 123  Q
       |||||||||||||||||||| ||||||    
T  34204895 attctgaaaatgacctattagggatgtttt 34204924  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 9 - 70
Target Start/End: Complemental strand, 7850726 - 7850665
Alignment:
Q  9 aaattttcggtttgatttgcaccctcgtaaaatttttattttccggtaaacacctttaatag 70  Q
    ||||||| ||||||||||||||||||||||||||||||||||| || |||||||| ||||||    
T  7850726 aaatttttggtttgatttgcaccctcgtaaaatttttattttctggaaaacacctctaatag 7850665  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #33
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 1 - 62
Target Start/End: Complemental strand, 9865264 - 9865203
Alignment:
Q  1 cccctattaaattttcggtttgatttgcaccctcgtaaaatttttattttccggtaaacacc 62  Q
    ||||||| ||||||||||||||| |||||||||||||||||||||||||||| | |||||||    
T  9865264 cccctataaaattttcggtttgacttgcaccctcgtaaaatttttattttccagaaaacacc 9865203  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #34
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 3 - 76
Target Start/End: Complemental strand, 28039127 - 28039054
Alignment:
Q  3 cctattaaattttcggtttgatttgcaccctcgtaaaatttttattttccggtaaacacctttaatagaccatt 76  Q
    ||||| |||||||||||||||||||||||||||||||| |||||||||| || |||||||  |||||| |||||    
T  28039127 cctataaaattttcggtttgatttgcaccctcgtaaaaattttattttcaggaaaacacccctaataggccatt 28039054  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #35
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 1 - 76
Target Start/End: Complemental strand, 10738990 - 10738915
Alignment:
Q  1 cccctattaaattttcggtttgatttgcaccctcgtaaaatttttattttccggtaaacacctttaatagaccatt 76  Q
    ||||||| |||||||||||||||||||||||||||||||||| || |||||||  |||||||  |||||| |||||    
T  10738990 cccctataaaattttcggtttgatttgcaccctcgtaaaattatttttttccgaaaaacacccctaatagcccatt 10738915  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #36
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 2 - 61
Target Start/End: Original strand, 15502578 - 15502637
Alignment:
Q  2 ccctattaaattttcggtttgatttgcaccctcgtaaaatttttattttccggtaaacac 61  Q
    |||||| ||||||||| ||| |||||||||||||||||||||||||||||||| ||||||    
T  15502578 ccctataaaattttcgttttaatttgcaccctcgtaaaatttttattttccggaaaacac 15502637  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #37
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 1 - 76
Target Start/End: Original strand, 30240615 - 30240690
Alignment:
Q  1 cccctattaaattttcggtttgatttgcaccctcgtaaaatttttattttccggtaaacacctttaatagaccatt 76  Q
    ||||||| ||||||||||| ||||||||||||||||||||  |||||||||||| |||||||  |||||| |||||    
T  30240615 cccctataaaattttcggtatgatttgcaccctcgtaaaaaatttattttccggaaaacacccctaataggccatt 30240690  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #38
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 2 - 76
Target Start/End: Complemental strand, 2039530 - 2039456
Alignment:
Q  2 ccctattaaattttcggtttgatttgcaccctcgtaaaatttttattttccggtaaacacctttaatagaccatt 76  Q
    |||||| |||||||||||||||||||||  ||| ||||||||||||||| ||  ||||||||||||||| |||||    
T  2039530 ccctataaaattttcggtttgatttgcaatctcataaaatttttatttttcgaaaaacacctttaataggccatt 2039456  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #39
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 1 - 54
Target Start/End: Complemental strand, 27660610 - 27660557
Alignment:
Q  1 cccctattaaattttcggtttgatttgcaccctcgtaaaatttttattttccgg 54  Q
    ||||||| |||||||||||||||||||||||||| ||||| |||||||||||||    
T  27660610 cccctataaaattttcggtttgatttgcaccctcataaaaattttattttccgg 27660557  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #40
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 2 - 128
Target Start/End: Original strand, 10738808 - 10738941
Alignment:
Q  2 ccctattaaattttcggtttgatttgcaccctcgtaaaatttttattttccggtaaacacctttaatagaccattcaa-aaccaaaattttttgaa---- 96  Q
    |||||| |||||||||||||||||||||||||||| |||| ||| ||||| || ||||||  |||| || |||||||| ||| ||||||| |||||        
T  10738808 ccctataaaattttcggtttgatttgcaccctcgt-aaatattttttttctggaaaacactcttaaaaggccattcaacaactaaaatttcttgaaaaaa 10738906  T
Q  97 ---ctgaaaatgacctattaggggtgtttttcgga 128  Q
       |||||||||  |||||||||||||||||||||    
T  10738907 attctgaaaatgggctattaggggtgtttttcgga 10738941  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #41
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 1 - 61
Target Start/End: Complemental strand, 14349153 - 14349093
Alignment:
Q  1 cccctattaaattttcggtttgatttgcaccctcgtaaaatttttattttccggtaaacac 61  Q
    ||||||| ||||||||| ||||||||||||| |||||||||||||||||| ||| ||||||    
T  14349153 cccctataaaattttcgatttgatttgcaccttcgtaaaatttttatttttcggaaaacac 14349093  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #42
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 18 - 96
Target Start/End: Original strand, 14348985 - 14349064
Alignment:
Q  18 gtttgatttgcaccctcgtaaaatttttattttccggtaaacacctttaatagaccattc-aaaaccaaaattttttgaa 96  Q
    |||||||||||||||||||||||||||||||| |  | |||| || ||||||| |||||| ||||||||||||| |||||    
T  14348985 gtttgatttgcaccctcgtaaaatttttatttccttgaaaactcccttaataggccattcaaaaaccaaaatttcttgaa 14349064  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #43
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 13 - 76
Target Start/End: Complemental strand, 18699222 - 18699159
Alignment:
Q  13 tttcggtttgatttgcaccctcgtaaaatttttattttccggtaaacacctttaatagaccatt 76  Q
    ||||||||||||||||||||||||||||||| |||||| ||| |||||||  |||||| |||||    
T  18699222 tttcggtttgatttgcaccctcgtaaaatttgtatttttcggaaaacacccctaataggccatt 18699159  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #44
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 12 - 75
Target Start/End: Original strand, 18771901 - 18771964
Alignment:
Q  12 ttttcggtttgatttgcaccctcgtaaaatttttattttccggtaaacacctttaatagaccat 75  Q
    |||| |||||||||||||||||||||||||||||||||||| | |||||||  |||||| ||||    
T  18771901 tttttggtttgatttgcaccctcgtaaaatttttattttccagaaaacacccctaataggccat 18771964  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #45
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 1 - 60
Target Start/End: Complemental strand, 34204978 - 34204919
Alignment:
Q  1 cccctattaaattttcggtttgatttgcaccctcgtaaaatttttattttccggtaaaca 60  Q
    ||||||| ||||||||||||| ||||||||||||||||| |||||||||| ||| |||||    
T  34204978 cccctataaaattttcggtttaatttgcaccctcgtaaattttttatttttcggaaaaca 34204919  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #46
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 1 - 96
Target Start/End: Complemental strand, 14597328 - 14597231
Alignment:
Q  1 cccctattaaattttcggtttgatttgcaccctcgtaaaatttttat-tttccggtaaacacctttaatagaccattc-aaaaccaaaattttttgaa 96  Q
    ||||||| ||||||||  ||||||||||||||||||||  ||||| | ||||||| ||||||| |||||||  ||||| ||||||||||||| |||||    
T  14597328 cccctataaaattttctatttgatttgcaccctcgtaatttttttttctttccggaaaacacccttaataggtcattcaaaaaccaaaatttcttgaa 14597231  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #47
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 11 - 76
Target Start/End: Original strand, 32276146 - 32276211
Alignment:
Q  11 attttcggtttgatttgcaccctcgtaaaatttttattttccggtaaacacctttaatagaccatt 76  Q
    ||||||||||||||||||||||| |||||| ||||||||||||  |||||||  |||||| |||||    
T  32276146 attttcggtttgatttgcacccttgtaaaaattttattttccgaaaaacacccctaataggccatt 32276211  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #48
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 1 - 76
Target Start/End: Original strand, 21382369 - 21382445
Alignment:
Q  1 cccctattaaattttcggtttgatttgcaccctcgt-aaaatttttattttccggtaaacacctttaatagaccatt 76  Q
    ||||||| ||||||||||||||||||| |||||||| |||| ||||||||||||| ||| |||  |||||| |||||    
T  21382369 cccctataaaattttcggtttgatttgtaccctcgtaaaaaattttattttccggaaaatacccctaataggccatt 21382445  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #49
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 3 - 93
Target Start/End: Original strand, 16127164 - 16127250
Alignment:
Q  3 cctattaaattttcggtttgatttgcaccctcgtaaaatttttattttccggtaaacacctttaatagacca-ttcaaaaccaaaatttttt 93  Q
    ||||| |||||||||||||||||||||| |||||||||     | ||||||| ||||||| ||||||| ||| || ||||||||||||||||    
T  16127164 cctataaaattttcggtttgatttgcactctcgtaaaa-----aatttccggaaaacacccttaataggccatttaaaaaccaaaatttttt 16127250  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #50
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 1 - 96
Target Start/End: Original strand, 34101032 - 34101134
Alignment:
Q  1 cccctattaaattttcggtttgatttgcaccctcgtaaaa------tttttattttccggtaaacacctttaatagaccattc-aaaaccaaaatttttt 93  Q
    ||||||| ||||||||||||||||| ||| ||||||||||      ||||| | |||||| ||||||| ||||||| |||||| ||||||||||||| ||    
T  34101032 cccctataaaattttcggtttgattagcatcctcgtaaaataattttttttttcttccggaaaacacccttaataggccattcaaaaaccaaaatttctt 34101131  T
Q  94 gaa 96  Q
    |||    
T  34101132 gaa 34101134  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #51
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 1 - 39
Target Start/End: Original strand, 7314575 - 7314613
Alignment:
Q  1 cccctattaaattttcggtttgatttgcaccctcgtaaa 39  Q
    ||||||| |||||||||||||||||||||||||||||||    
T  7314575 cccctataaaattttcggtttgatttgcaccctcgtaaa 7314613  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #52
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 9 - 90
Target Start/End: Original strand, 28228660 - 28228742
Alignment:
Q  9 aaattttcggtttgatttgcaccctcgtaaaatttttattttccggtaaacacctttaatagaccattc-aaaaccaaaattt 90  Q
    ||||||||||||||||||||||||||||||||  |  |  | |||| ||||||| ||||||| |||||| |||||||||||||    
T  28228660 aaattttcggtttgatttgcaccctcgtaaaaaataaaaataccggaaaacacccttaataggccattcaaaaaccaaaattt 28228742  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #53
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 9 - 62
Target Start/End: Complemental strand, 11537924 - 11537871
Alignment:
Q  9 aaattttcggtttgatttgcaccctcgtaaaatttttattttccggtaaacacc 62  Q
    ||||||||||||||||||||| ||| |||||| |||| |||||||| |||||||    
T  11537924 aaattttcggtttgatttgcatccttgtaaaactttttttttccggaaaacacc 11537871  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #54
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 9 - 62
Target Start/End: Complemental strand, 11563434 - 11563381
Alignment:
Q  9 aaattttcggtttgatttgcaccctcgtaaaatttttattttccggtaaacacc 62  Q
    ||||||||||||||||||||| ||| |||||| |||| |||||||| |||||||    
T  11563434 aaattttcggtttgatttgcatccttgtaaaactttttttttccggaaaacacc 11563381  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #55
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 9 - 42
Target Start/End: Original strand, 14597152 - 14597185
Alignment:
Q  9 aaattttcggtttgatttgcaccctcgtaaaatt 42  Q
    ||||||||||||||||||||||||||||||||||    
T  14597152 aaattttcggtttgatttgcaccctcgtaaaatt 14597185  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #56
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 1 - 63
Target Start/End: Original strand, 17400129 - 17400193
Alignment:
Q  1 cccctattaaattttcggtttgatttgcaccctcgtaaaa--tttttattttccggtaaacacct 63  Q
    ||||||| ||||||||||||||||||||| ||| ||||||  ||||| |||||||| ||||||||    
T  17400129 cccctataaaattttcggtttgatttgcatccttgtaaaactttttttttttccggaaaacacct 17400193  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #57
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 2 - 62
Target Start/End: Original strand, 26241327 - 26241387
Alignment:
Q  2 ccctattaaattttcggtttgatttgcaccctcgtaaaatttttattttccggtaaacacc 62  Q
    |||||| ||||||||||||||| ||||| ||| |||||| |||| |||||||| |||||||    
T  26241327 ccctataaaattttcggtttgaattgcatccttgtaaaactttttttttccggaaaacacc 26241387  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #58
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 9 - 40
Target Start/End: Original strand, 1414642 - 1414673
Alignment:
Q  9 aaattttcggtttgatttgcaccctcgtaaaa 40  Q
    ||||||||||||||||||||||||||||||||    
T  1414642 aaattttcggtttgatttgcaccctcgtaaaa 1414673  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #59
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 9 - 81
Target Start/End: Original strand, 22043581 - 22043656
Alignment:
Q  9 aaattttcggtttgatttgcaccc-tcgtaaaatttttattttcc-ggtaaaca-cctttaatagaccattcaaaa 81  Q
    ||||||| |||||||||||||||| || ||||||||||||||||| || ||||| |||| ||||| ||||||||||    
T  22043581 aaatttttggtttgatttgcacccttcataaaatttttattttccnggaaaacacccttaaataggccattcaaaa 22043656  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #60
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 9 - 76
Target Start/End: Complemental strand, 34101220 - 34101153
Alignment:
Q  9 aaattttcggtttgatttgcaccctcgtaaaatttttattttccggtaaacacctttaatagaccatt 76  Q
    |||||||||||||||||||   | |||||||| ||||||||||||  ||||||| ||||||| |||||    
T  34101220 aaattttcggtttgatttgtgtcatcgtaaaaattttattttccgaaaaacacccttaataggccatt 34101153  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #61
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 4 - 50
Target Start/End: Original strand, 6176745 - 6176791
Alignment:
Q  4 ctattaaattttcggtttgatttgcaccctcgtaaaatttttatttt 50  Q
    |||| ||||||||| ||||||||||||||||||||| ||||| ||||    
T  6176745 ctataaaattttcgatttgatttgcaccctcgtaaattttttttttt 6176791  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #62
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 1 - 51
Target Start/End: Original strand, 28631026 - 28631076
Alignment:
Q  1 cccctattaaattttcggtttgatttgcaccctcgtaaaatttttattttc 51  Q
    ||||||| ||||||||| ||||||||||| ||| |||||| ||||||||||    
T  28631026 cccctatcaaattttcgctttgatttgcatccttgtaaaacttttattttc 28631076  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #63
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 50
Target Start/End: Complemental strand, 10630625 - 10630576
Alignment:
Q  1 cccctattaaattttcggtttgatttgcaccctcgtaaaatttttatttt 50  Q
    ||||||| ||||||||||||||||||||| ||| |||||| |||| ||||    
T  10630625 cccctataaaattttcggtttgatttgcatccttgtaaaacttttttttt 10630576  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #64
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 9 - 41
Target Start/End: Original strand, 2686324 - 2686356
Alignment:
Q  9 aaattttcggtttgatttgcaccctcgtaaaat 41  Q
    ||||||||| |||||||||||||||||||||||    
T  2686324 aaattttcgatttgatttgcaccctcgtaaaat 2686356  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #65
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 2 - 46
Target Start/End: Complemental strand, 17398504 - 17398460
Alignment:
Q  2 ccctattaaattttcggtttgatttgcaccctcgtaaaattttta 46  Q
    |||||| ||||||||||||||||||||| ||| |||||| |||||    
T  17398504 ccctataaaattttcggtttgatttgcatccttgtaaaactttta 17398460  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 73; Significance: 3e-33; HSPs: 100)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 73; E-Value: 3e-33
Query Start/End: Original strand, 1 - 96
Target Start/End: Complemental strand, 7511582 - 7511486
Alignment:
Q  1 cccctattaaattttcggtttgatttgcaccctcgtaaaatttttattttccggtaaacacctttaatagaccattc-aaaaccaaaattttttgaa 96  Q
    ||||||| |||||||||||||||||||||||||||||||||||||||||||||| ||||||| ||||||| |||||| |||||||||||||||||||    
T  7511582 cccctataaaattttcggtttgatttgcaccctcgtaaaatttttattttccggaaaacacccttaataggccattcaaaaaccaaaattttttgaa 7511486  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 73; E-Value: 3e-33
Query Start/End: Original strand, 1 - 96
Target Start/End: Complemental strand, 7515866 - 7515770
Alignment:
Q  1 cccctattaaattttcggtttgatttgcaccctcgtaaaatttttattttccggtaaacacctttaatagaccattc-aaaaccaaaattttttgaa 96  Q
    ||||||| |||||||||||||||||||||||||||||||||||||||||||||| ||||||| ||||||| |||||| |||||||||||||||||||    
T  7515866 cccctataaaattttcggtttgatttgcaccctcgtaaaatttttattttccggaaaacacccttaataggccattcaaaaaccaaaattttttgaa 7515770  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 1 - 128
Target Start/End: Original strand, 20962094 - 20962230
Alignment:
Q  1 cccctattaaattttcggtttgatttgcaccctcgtaaaatttttattttccggtaaacacctttaatagaccattc-aaaaccaaaattttttgaa--- 96  Q
    ||||||| |||||||||||||||||||||||||||||||||||||||||||||| ||||||| ||||||| |||||| ||||||||||||| |||||       
T  20962094 cccctataaaattttcggtttgatttgcaccctcgtaaaatttttattttccggaaaacacccttaataggccattcaaaaaccaaaatttcttgaaaaa 20962193  T
Q  97 -----ctgaaaatgacctattaggggtgtttttcgga 128  Q
         ||||||||| ||||||||||||||||| ||||    
T  20962194 aaattctgaaaatggcctattaggggtgttttccgga 20962230  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 69; E-Value: 6e-31
Query Start/End: Original strand, 1 - 123
Target Start/End: Original strand, 20513719 - 20513849
Alignment:
Q  1 cccctattaaattttcggtttgatttgcaccctcgtaaaatttttattttccggtaaacacctttaatagaccattc-aaaaccaaaattttttgaa--- 96  Q
    ||||||| |||||||||||||||||||||| ||||||||||||||||||||||| ||||||| ||||||| |||||| ||||||||||||| || ||       
T  20513719 cccctataaaattttcggtttgatttgcactctcgtaaaatttttattttccggaaaacacccttaataggccattcaaaaaccaaaatttcttaaaaaa 20513818  T
Q  97 ----ctgaaaatgacctattaggggtgtttt 123  Q
        |||||||||||||||||||||||||||    
T  20513819 aattctgaaaatgacctattaggggtgtttt 20513849  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 1 - 123
Target Start/End: Complemental strand, 20100994 - 20100863
Alignment:
Q  1 cccctattaaattttcggtttgatttgcaccctcgtaaaatttttattttccggtaaacacctttaatagaccattc-aaaaccaaaattttttgaa--- 96  Q
    ||||||| ||||||| |||||||||||||||||||||||||||||||||||||| ||||||| ||||||| |||||| ||||||||||||| |||||       
T  20100994 cccctataaaatttttggtttgatttgcaccctcgtaaaatttttattttccggaaaacacccttaataggccattcaaaaaccaaaatttcttgaaaaa 20100895  T
Q  97 -----ctgaaaatgacctattaggggtgtttt 123  Q
         ||||||||| |||||||||||||||||    
T  20100894 aaattctgaaaatggcctattaggggtgtttt 20100863  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 1 - 92
Target Start/End: Complemental strand, 33216623 - 33216531
Alignment:
Q  1 cccctattaaattttcggtttgatttgcaccctcgtaaaatttttattttccggtaaacacctttaatagaccattc-aaaaccaaaattttt 92  Q
    ||||||| |||||||||||||||||||||||||||||||||||||||||| ||| ||||||| ||||||| |||||| |||||||||||||||    
T  33216623 cccctataaaattttcggtttgatttgcaccctcgtaaaatttttatttttcggaaaacacccttaataggccattcaaaaaccaaaattttt 33216531  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 1 - 96
Target Start/End: Complemental strand, 40926914 - 40926818
Alignment:
Q  1 cccctattaaattttcggtttgatttgcaccctcgtaaaatttttattttccggtaaacacctttaatagaccattc-aaaaccaaaattttttgaa 96  Q
    ||||||| |||||||||||||||||||||||||||||||||||||||||||| | ||||||| ||||||| |||||| ||||||||||||| |||||    
T  40926914 cccctataaaattttcggtttgatttgcaccctcgtaaaatttttattttccagaaaacacccttaataggccattcaaaaaccaaaatttcttgaa 40926818  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 64; E-Value: 6e-28
Query Start/End: Original strand, 1 - 128
Target Start/End: Original strand, 12883132 - 12883268
Alignment:
Q  1 cccctattaaattttcggtttgatttgcaccctcgtaaaatttttattttccggtaaacacctttaatagaccattc-aaaaccaaaattttttgaa--- 96  Q
    ||||||| |||||||||||||||||||||||||||||||| |||||||||| || ||||||| ||||||| |||||| ||||||||||||| |||||       
T  12883132 cccctataaaattttcggtttgatttgcaccctcgtaaaaattttattttctggaaaacacccttaataggccattcaaaaaccaaaatttcttgaaaaa 12883231  T
Q  97 -----ctgaaaatgacctattaggggtgtttttcgga 128  Q
         ||||||||| ||||||||||||||||| ||||    
T  12883232 aaattctgaaaatggcctattaggggtgttttccgga 12883268  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 1 - 123
Target Start/End: Original strand, 5513533 - 5513664
Alignment:
Q  1 cccctattaaattttcggtttgatttgcaccctcgtaaaatttttattttccggtaaacacctttaatagaccattc-aaaaccaaaattttttgaa--- 96  Q
    ||||||| |||||||||||||||||||||||||||||||| ||||||||||||  ||||||| ||||||| |||||| ||||||||||||| |||||       
T  5513533 cccctataaaattttcggtttgatttgcaccctcgtaaaaattttattttccgaaaaacacccttaataggccattcaaaaaccaaaatttcttgaaaaa 5513632  T
Q  97 -----ctgaaaatgacctattaggggtgtttt 123  Q
         ||||||||| |||||||||||||||||    
T  5513633 aaattctgaaaatggcctattaggggtgtttt 5513664  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 3 - 96
Target Start/End: Complemental strand, 18817421 - 18817327
Alignment:
Q  3 cctattaaattttcggtttgatttgcaccctcgtaaaatttttattttccggtaaacacctttaatagaccattc-aaaaccaaaattttttgaa 96  Q
    ||||| |||||||||||||||||||||||||||||||||||||||||||||| ||||||| |||||||  ||||| ||||||||||||| |||||    
T  18817421 cctataaaattttcggtttgatttgcaccctcgtaaaatttttattttccggaaaacacccttaataggtcattcaaaaaccaaaatttcttgaa 18817327  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 2 - 128
Target Start/End: Complemental strand, 28192531 - 28192396
Alignment:
Q  2 ccctattaaattttcggtttgatttgcaccctcgtaaaatttttattttccggtaaacacctttaatagaccattc-aaaaccaaaattttttgaa---- 96  Q
    |||||| |||||||||||||||||| ||||||||||||||||||||||||||| ||||||| ||||||| |||||| ||||| ||||||| |||||        
T  28192531 ccctataaaattttcggtttgattttcaccctcgtaaaatttttattttccggaaaacacccttaataggccattcaaaaacaaaaatttcttgaaaaaa 28192432  T
Q  97 ----ctgaaaatgacctattaggggtgtttttcgga 128  Q
        ||||||||| ||||||||||||||||| ||||    
T  28192431 aaatctgaaaatgtcctattaggggtgttttccgga 28192396  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 1 - 123
Target Start/End: Complemental strand, 34963588 - 34963457
Alignment:
Q  1 cccctattaaattttcggtttgatttgcaccctcgtaaaatttttattttccggtaaacacctttaatagaccattc-aaaaccaaaattttttgaa--- 96  Q
    ||||||| |||||||||||||||||||||| ||||||||||||||||||||||  ||||||| ||||||| |||||| ||||||||||||| |||||       
T  34963588 cccctataaaattttcggtttgatttgcactctcgtaaaatttttattttccgaaaaacacccttaataggccattcaaaaaccaaaatttcttgaaaaa 34963489  T
Q  97 -----ctgaaaatgacctattaggggtgtttt 123  Q
         ||||||||| |||||||||||||||||    
T  34963488 aaattctgaaaatggcctattaggggtgtttt 34963457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 2 - 123
Target Start/End: Complemental strand, 39615817 - 39615687
Alignment:
Q  2 ccctattaaattttcggtttgatttgcaccctcgtaaaatttttattttccggtaaacacctttaatagaccattc-aaaaccaaaattttttgaa---- 96  Q
    |||||| |||||||||||||||||||||||||||||||||||||||||| ||  ||||||| ||||||| |||||| ||||||||||||| |||||        
T  39615817 ccctataaaattttcggtttgatttgcaccctcgtaaaatttttatttttcgaaaaacacccttaataggccattcaaaaaccaaaatttcttgaaaaaa 39615718  T
Q  97 ----ctgaaaatgacctattaggggtgtttt 123  Q
        ||||||||| |||||||||||||||||    
T  39615717 aattctgaaaatggcctattaggggtgtttt 39615687  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 1 - 96
Target Start/End: Complemental strand, 8972901 - 8972805
Alignment:
Q  1 cccctattaaattttcggtttgatttgcaccctcgtaaaatttttattttccggtaaacacctttaatagaccattc-aaaaccaaaattttttgaa 96  Q
    ||||||| ||||||||||||| |||||||||||||||||||||||||||| ||| ||||||| ||||||| |||||| |||| ||||||||||||||    
T  8972901 cccctataaaattttcggtttaatttgcaccctcgtaaaatttttatttttcggaaaacacccttaataggccattcaaaaatcaaaattttttgaa 8972805  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 1 - 96
Target Start/End: Complemental strand, 20891830 - 20891734
Alignment:
Q  1 cccctattaaattttcggtttgatttgcaccctcgtaaaatttttattttccggtaaacacctttaatagaccattc-aaaaccaaaattttttgaa 96  Q
    ||||||| |||||||||||||||||||||||||||||||||||||||||||| | ||||| | ||||||| |||||| ||||||||||||| |||||    
T  20891830 cccctataaaattttcggtttgatttgcaccctcgtaaaatttttattttccagaaaacatccttaataggccattcaaaaaccaaaatttcttgaa 20891734  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 1 - 128
Target Start/End: Original strand, 22265185 - 22265322
Alignment:
Q  1 cccctattaaattttcggtttgatttgcaccctcgtaaaatttttattttccggtaaaca-cctttaatagaccattc-aaaaccaaaattttttgaa-- 96  Q
    ||||||| ||||||||||||||||||||||| |||||||||||||||||||||| ||||| ||||||| || |||||| ||||||||||||| |||||      
T  22265185 cccctataaaattttcggtttgatttgcaccatcgtaaaatttttattttccggaaaacaccctttaaaaggccattcaaaaaccaaaatttcttgaaat 22265284  T
Q  97 ------ctgaaaatgacctattaggggtgtttttcgga 128  Q
          ||||||||| ||||||| ||||||||||||||    
T  22265285 ttttttctgaaaatggcctattaagggtgtttttcgga 22265322  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 1 - 96
Target Start/End: Original strand, 36202170 - 36202266
Alignment:
Q  1 cccctattaaattttcggtttgatttgcaccctcgtaaaatttttattttccggtaaacacctttaatagaccattc-aaaaccaaaattttttgaa 96  Q
    ||||||| |||||||||||||||||||||||||||||||| |||||||||| || ||||||| ||||||| |||||| ||||||||||||| |||||    
T  36202170 cccctataaaattttcggtttgatttgcaccctcgtaaaaattttattttctggaaaacacccttaataggccattcaaaaaccaaaatttcttgaa 36202266  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 9 - 128
Target Start/End: Original strand, 1320661 - 1320789
Alignment:
Q  9 aaattttcggtttgatttgcaccctcgtaaaatttttattttccggtaaacacctttaatagaccattc-aaaaccaaaattttttgaa--------ctg 99  Q
    ||||||||||||||||||||||| |||||||||||||||||| ||  ||||||| ||||||| |||||| ||||||||||||| |||||        |||    
T  1320661 aaattttcggtttgatttgcaccatcgtaaaatttttatttttcgaaaaacacccttaataggccattcaaaaaccaaaatttcttgaaaaaaaattctg 1320760  T
Q  100 aaaatgacctattaggggtgtttttcgga 128  Q
    |||||| ||||||||||||||||||||||    
T  1320761 aaaatggcctattaggggtgtttttcgga 1320789  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 2 - 96
Target Start/End: Original strand, 14274276 - 14274371
Alignment:
Q  2 ccctattaaattttcggtttgatttgcaccctcgtaaaatttttattttccggtaaacacctttaatagaccattc-aaaaccaaaattttttgaa 96  Q
    |||||| |||||||||||||||||| |||||||||||||||||||||||| || ||||||| ||||||| |||||| ||||||||||||| |||||    
T  14274276 ccctataaaattttcggtttgatttccaccctcgtaaaatttttattttctggaaaacacccttaataggccattcaaaaaccaaaatttattgaa 14274371  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 2 - 96
Target Start/End: Original strand, 18115398 - 18115493
Alignment:
Q  2 ccctattaaattttcggtttgatttgcaccctcgtaaaatttttattttccggtaaacacctttaatagaccattc-aaaaccaaaattttttgaa 96  Q
    |||||| ||||||| |||||||||||||||||||||||| ||||||||||||| ||||||| ||||||| |||||| ||||||||||||| |||||    
T  18115398 ccctataaaatttttggtttgatttgcaccctcgtaaaaattttattttccggaaaacacccttaataggccattcaaaaaccaaaatttcttgaa 18115493  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 59; E-Value: 6e-25
Query Start/End: Original strand, 1 - 90
Target Start/End: Original strand, 18756816 - 18756906
Alignment:
Q  1 cccctattaaattttcggtttgatttgcaccctcgtaaaatttttattttccggtaaacacctttaatagaccattc-aaaaccaaaattt 90  Q
    ||||||| |||||||||||||||||||||||||||||||| ||||||||||||| ||||||| || |||| |||||| |||||||||||||    
T  18756816 cccctataaaattttcggtttgatttgcaccctcgtaaaaattttattttccggaaaacaccctttataggccattcaaaaaccaaaattt 18756906  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 59; E-Value: 6e-25
Query Start/End: Original strand, 6 - 128
Target Start/End: Original strand, 20025375 - 20025506
Alignment:
Q  6 attaaattttcggtttgatttgcaccctcgtaaaatttttattttccggtaaacacctttaatagaccattc-aaaaccaaaattttttgaa-------- 96  Q
    |||||| ||||||||||||||||||||||||| |||||||||||||||| ||||| | ||||||| |||||| ||||||||||||| |||||            
T  20025375 attaaaatttcggtttgatttgcaccctcgtacaatttttattttccggaaaacatccttaataggccattcaaaaaccaaaatttattgaaaaaaaatt 20025474  T
Q  97 ctgaaaatgacctattaggggtgtttttcgga 128  Q
    ||||||||| ||||||||||||||||| ||||    
T  20025475 ctgaaaatggcctattaggggtgttttccgga 20025506  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 59; E-Value: 6e-25
Query Start/End: Original strand, 11 - 96
Target Start/End: Original strand, 39257190 - 39257276
Alignment:
Q  11 attttcggtttgatttgcaccctcgtaaaatttttattttccggtaaacacctttaatagaccattc-aaaaccaaaattttttgaa 96  Q
    ||||||| |||||||| ||||||||||||||||||||||||||| ||||||| ||||||| |||||| |||||||||||||||||||    
T  39257190 attttcgatttgattttcaccctcgtaaaatttttattttccggaaaacacccttaataggccattcgaaaaccaaaattttttgaa 39257276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 2 - 123
Target Start/End: Complemental strand, 18966914 - 18966784
Alignment:
Q  2 ccctattaaattttcggtttgatttgcaccctcgtaaaatttttattttccggtaaacacctttaatagaccattc-aaaaccaaaattttttgaa---- 96  Q
    |||||| ||||||||| |||||||||||||||||||||||||||||||| ||| ||||||| ||||||| |||||| |||| |||||||| |||||        
T  18966914 ccctataaaattttcgatttgatttgcaccctcgtaaaatttttatttttcggaaaacacccttaataggccattcaaaaatcaaaatttcttgaaaaaa 18966815  T
Q  97 ----ctgaaaatgacctattaggggtgtttt 123  Q
        ||||||||| |||||||||||||||||    
T  18966814 aattctgaaaatggcctattaggggtgtttt 18966784  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 57; E-Value: 9e-24
Query Start/End: Original strand, 9 - 81
Target Start/End: Original strand, 5863244 - 5863316
Alignment:
Q  9 aaattttcggtttgatttgcaccctcgtaaaatttttattttccggtaaacacctttaatagaccattcaaaa 81  Q
    ||||||||||||||||||||||||||||||||||||||||||| || ||||||| ||||||| ||||||||||    
T  5863244 aaattttcggtttgatttgcaccctcgtaaaatttttattttctggaaaacacccttaataggccattcaaaa 5863316  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 57; E-Value: 9e-24
Query Start/End: Original strand, 1 - 96
Target Start/End: Complemental strand, 30462417 - 30462321
Alignment:
Q  1 cccctattaaattttcggtttgatttgcaccctcgtaaaatttttattttccggtaaacacctttaatagaccattc-aaaaccaaaattttttgaa 96  Q
    ||||||| |||||||||||||||||||||||||||||||| ||||||||||| | ||||||| |||||||  ||||| ||||||||||||| |||||    
T  30462417 cccctataaaattttcggtttgatttgcaccctcgtaaaacttttattttccagaaaacacccttaataggtcattcaaaaaccaaaatttcttgaa 30462321  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 2 - 96
Target Start/End: Complemental strand, 1151388 - 1151293
Alignment:
Q  2 ccctattaaattttcggtttgatttgcaccctcgtaaaatttttattttccggtaaacacctttaatagaccattc-aaaaccaaaattttttgaa 96  Q
    |||||| |||||||||||||||||||||||||||||||| ||||||||||||  | ||||| ||||||| |||||| ||||||||||||| |||||    
T  1151388 ccctataaaattttcggtttgatttgcaccctcgtaaaaattttattttccgaaagacacccttaataggccattcaaaaaccaaaatttcttgaa 1151293  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 1 - 76
Target Start/End: Complemental strand, 12883317 - 12883242
Alignment:
Q  1 cccctattaaattttcggtttgatttgcaccctcgtaaaatttttattttccggtaaacacctttaatagaccatt 76  Q
    ||||||| |||||||||||||||||||||||||||||||||||||||||||||| |||||||  |||||| |||||    
T  12883317 cccctataaaattttcggtttgatttgcaccctcgtaaaatttttattttccggaaaacacccctaataggccatt 12883242  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 1 - 76
Target Start/End: Complemental strand, 42336043 - 42335968
Alignment:
Q  1 cccctattaaattttcggtttgatttgcaccctcgtaaaatttttattttccggtaaacacctttaatagaccatt 76  Q
    ||||||| |||||||||||||||||||||||||| ||||||||||||||||||| ||||||| ||||||| |||||    
T  42336043 cccctataaaattttcggtttgatttgcaccctcataaaatttttattttccggaaaacacccttaataggccatt 42335968  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 9 - 128
Target Start/End: Original strand, 44353960 - 44354088
Alignment:
Q  9 aaattttcggtttgatttgcaccctcgtaaaatttttattttccggtaaacacctttaatagaccattc-aaaaccaaaattttttgaa--------ctg 99  Q
    ||||||| |||||||||||||||||| ||||||||||||||||||| ||||||| ||||||| |||||| |||||||||| || |||||        |||    
T  44353960 aaatttttggtttgatttgcaccctcataaaatttttattttccggaaaacacccttaataggccattcaaaaaccaaaaattcttgaaaaaaaattctg 44354059  T
Q  100 aaaatgacctattaggggtgtttttcgga 128  Q
    |||||| ||||||||||||||||| ||||    
T  44354060 aaaatggcctattaggggtgttttccgga 44354088  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 1 - 90
Target Start/End: Complemental strand, 2077278 - 2077188
Alignment:
Q  1 cccctattaaattttcggtttgatttgcaccctcgtaaaatttttattttccggtaaacacctttaatagaccattc-aaaaccaaaattt 90  Q
    ||||||| ||||||| | ||||||||||||||| |||||||||||||||||||| ||||||| ||||||| |||||| |||||||||||||    
T  2077278 cccctataaaatttttgttttgatttgcacccttgtaaaatttttattttccggaaaacacccttaataggccattcaaaaaccaaaattt 2077188  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 2 - 76
Target Start/End: Complemental strand, 27927167 - 27927093
Alignment:
Q  2 ccctattaaattttcggtttgatttgcaccctcgtaaaatttttattttccggtaaacacctttaatagaccatt 76  Q
    |||||| ||||||| |||||||||||||||||||||||||||||||||||||| |||||||| |||||| |||||    
T  27927167 ccctataaaatttttggtttgatttgcaccctcgtaaaatttttattttccggaaaacacctctaataggccatt 27927093  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 1 - 124
Target Start/End: Complemental strand, 43209412 - 43209278
Alignment:
Q  1 cccctattaaattttcggtttgatttgcaccctcgtaaaatttttattttccggta---aacacctttaatagaccattc-aaaaccaaaattttttgaa 96  Q
    ||||||| |||||||||||||||||||||||||||||||||||||||||||||| |   |||||| ||||||| | |||| ||||||||||||| |||||    
T  43209412 cccctataaaattttcggtttgatttgcaccctcgtaaaatttttattttccggaaaacaacacccttaataggcaattcaaaaaccaaaatttcttgaa 43209313  T
Q  97 -------ctgaaaatgacctattaggggtgttttt 124  Q
           ||||||||| | ||||||||||||||||    
T  43209312 aaaaattctgaaaatggcatattaggggtgttttt 43209278  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 2 - 90
Target Start/End: Complemental strand, 5529159 - 5529070
Alignment:
Q  2 ccctattaaattttcggtttgatttgcaccctcgtaaaatttttattttccggtaaacacctttaatagaccattc-aaaaccaaaattt 90  Q
    |||||| |||||||||||||||||||||||||||||||| ||||||||| ||| ||||| | ||||||| |||||| |||||||||||||    
T  5529159 ccctataaaattttcggtttgatttgcaccctcgtaaaaattttatttttcggaaaacatccttaataggccattcaaaaaccaaaattt 5529070  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 4 - 96
Target Start/End: Original strand, 25301362 - 25301455
Alignment:
Q  4 ctattaaattttcggtttgatttgcaccctcgtaaaatttttattttccggtaaacacctttaatagaccattc-aaaaccaaaattttttgaa 96  Q
    |||| |||||||||||||||||| ||| ||||||||||||||||||| ||| ||||||| ||||||| |||||| ||||||||||||| |||||    
T  25301362 ctataaaattttcggtttgattttcacgctcgtaaaatttttatttttcggaaaacacccttaataggccattcaaaaaccaaaatttcttgaa 25301455  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 9 - 76
Target Start/End: Complemental strand, 22265363 - 22265296
Alignment:
Q  9 aaattttcggtttgatttgcaccctcgtaaaatttttattttccggtaaacacctttaatagaccatt 76  Q
    |||||||||||||||||||||||||||||||||||||||||||||  ||||||| ||||||| |||||    
T  22265363 aaattttcggtttgatttgcaccctcgtaaaatttttattttccgaaaaacacccttaataggccatt 22265296  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 11 - 128
Target Start/End: Original strand, 22422820 - 22422947
Alignment:
Q  11 attttcggtttgatttgcaccctcgtaaaatttttattttccggtaaacacctttaatagaccattc-aaaaccaaaattttttgaa---------ctga 100  Q
    ||||||||||||||||| |||||||||||| ||||||||||||| |||||   ||||||| |||||| ||||||||||||| |||||         ||||    
T  22422820 attttcggtttgatttggaccctcgtaaaaattttattttccggaaaacaatcttaataggccattcaaaaaccaaaatttcttgaaaaaaaaattctga 22422919  T
Q  101 aaatgacctattaggggtgtttttcgga 128  Q
    ||||| ||||||||||||||||||||||    
T  22422920 aaatggcctattaggggtgtttttcgga 22422947  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 1 - 128
Target Start/End: Original strand, 25890597 - 25890733
Alignment:
Q  1 cccctattaaattttcggtttgatttgcaccctcgtaaaatttttattttccggtaaacacctttaatagaccattc-aaaaccaaaattttttgaa--- 96  Q
    ||||||| ||||||| | ||||||||||||||||||||| |||||||||||| | ||||||| ||||||| |||||| ||||||||||||| || ||       
T  25890597 cccctataaaatttttgatttgatttgcaccctcgtaaattttttattttccagaaaacacccttaataggccattcaaaaaccaaaatttcttaaaaaa 25890696  T
Q  97 -----ctgaaaatgacctattaggggtgtttttcgga 128  Q
         ||||||||| ||||||||||||||||| ||||    
T  25890697 aacttctgaaaatggcctattaggggtgttttccgga 25890733  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 1 - 76
Target Start/End: Complemental strand, 44354137 - 44354062
Alignment:
Q  1 cccctattaaattttcggtttgatttgcaccctcgtaaaatttttattttccggtaaacacctttaatagaccatt 76  Q
    ||||||| ||||||||||||||||||||||||| |||||||||||||||||||| |||||||  |||||| |||||    
T  44354137 cccctataaaattttcggtttgatttgcacccttgtaaaatttttattttccggaaaacacccctaataggccatt 44354062  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 17 - 87
Target Start/End: Original strand, 1591894 - 1591964
Alignment:
Q  17 ggtttgatttgcaccctcgtaaaatttttattttccggtaaacacctttaatagaccattcaaaaccaaaa 87  Q
    |||||||||||||||||||||||||||||||||||||  ||||||| ||||||| |||||||||| |||||    
T  1591894 ggtttgatttgcaccctcgtaaaatttttattttccgaaaaacacccttaataggccattcaaaaacaaaa 1591964  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 2 - 76
Target Start/End: Complemental strand, 25890781 - 25890707
Alignment:
Q  2 ccctattaaattttcggtttgatttgcaccctcgtaaaatttttattttccggtaaacacctttaatagaccatt 76  Q
    |||||| |||||||||||||||||||||||||||||||| ||||||||||||| |||||||  |||||| |||||    
T  25890781 ccctataaaattttcggtttgatttgcaccctcgtaaaaattttattttccggaaaacacccctaataggccatt 25890707  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #42
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 1 - 62
Target Start/End: Complemental strand, 5863422 - 5863361
Alignment:
Q  1 cccctattaaattttcggtttgatttgcaccctcgtaaaatttttattttccggtaaacacc 62  Q
    ||||||| |||||||||||||||||||||||||||||||||||||||||||| | |||||||    
T  5863422 cccctataaaattttcggtttgatttgcaccctcgtaaaatttttattttccagaaaacacc 5863361  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #43
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 18 - 90
Target Start/End: Complemental strand, 6748962 - 6748890
Alignment:
Q  18 gtttgatttgcaccctcgtaaaatttttattttccggtaaacacctttaatagaccattcaaaaccaaaattt 90  Q
    ||||||||||||||||||||||| ||||||||||| | |||| || ||||||| |||||||||||||||||||    
T  6748962 gtttgatttgcaccctcgtaaaaattttattttccagaaaactcccttaataggccattcaaaaccaaaattt 6748890  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #44
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 9 - 96
Target Start/End: Complemental strand, 8224615 - 8224527
Alignment:
Q  9 aaattttcggtttgatttgcaccctcgtaaaatttttattttccggtaaacacctttaatagaccattc-aaaaccaaaattttttgaa 96  Q
    ||||||||||||||||||||| ||||||||||| | | |||||||| ||||||| ||||||| |||||| ||||||||||||| |||||    
T  8224615 aaattttcggtttgatttgcatcctcgtaaaatatattttttccggaaaacacccttaataggccattcaaaaaccaaaatttcttgaa 8224527  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #45
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 9 - 93
Target Start/End: Original strand, 18755467 - 18755551
Alignment:
Q  9 aaattttcggtttgatttgcaccctcgtaaaatttttattttccggtaaacacctttaatagaccattcaaaaccaaaatttttt 93  Q
    ||||||||||||||||||| |||||||||||  ||||||||||||| ||||||| |||| || |||||||||| ||||| |||||    
T  18755467 aaattttcggtttgatttggaccctcgtaaatattttattttccggaaaacacccttaacaggccattcaaaaacaaaaattttt 18755551  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #46
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 1 - 69
Target Start/End: Original strand, 26502414 - 26502482
Alignment:
Q  1 cccctattaaattttcggtttgatttgcaccctcgtaaaatttttattttccggtaaacacctttaata 69  Q
    ||||||| || ||||||||||||||||||||||||||||| ||||||||||||| ||||||| ||||||    
T  26502414 cccctataaatttttcggtttgatttgcaccctcgtaaaaattttattttccggaaaacacccttaata 26502482  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #47
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 1 - 76
Target Start/End: Complemental strand, 397051 - 396976
Alignment:
Q  1 cccctattaaattttcggtttgatttgcaccctcgtaaaatttttattttccggtaaacacctttaatagaccatt 76  Q
    ||||||| |||||||||||||||||||||||||||||||||||||||||| | | |||||||  |||||| |||||    
T  397051 cccctataaaattttcggtttgatttgcaccctcgtaaaatttttattttacagaaaacacccctaataggccatt 396976  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #48
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 1 - 76
Target Start/End: Original strand, 1151204 - 1151279
Alignment:
Q  1 cccctattaaattttcggtttgatttgcaccctcgtaaaatttttattttccggtaaacacctttaatagaccatt 76  Q
    ||||||| ||||||| ||||||||||| |||||||||||| ||||||||||||| ||||||| ||||||| |||||    
T  1151204 cccctataaaatttttggtttgatttgtaccctcgtaaaaattttattttccggaaaacacccttaataggccatt 1151279  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #49
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 1 - 76
Target Start/End: Complemental strand, 5513718 - 5513643
Alignment:
Q  1 cccctattaaattttcggtttgatttgcaccctcgtaaaatttttattttccggtaaacacctttaatagaccatt 76  Q
    ||||||| ||||||||||||||||||||| |||||||||||||||||||||| | |||||||  |||||| |||||    
T  5513718 cccctataaaattttcggtttgatttgcatcctcgtaaaatttttattttccagaaaacacccctaataggccatt 5513643  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #50
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 1 - 76
Target Start/End: Original strand, 13236822 - 13236897
Alignment:
Q  1 cccctattaaattttcggtttgatttgcaccctcgtaaaatttttattttccggtaaacacctttaatagaccatt 76  Q
    ||||||| ||||||||||||||||||||||||||||||||| ||| |||||||| |||||||  |||||| |||||    
T  13236822 cccctataaaattttcggtttgatttgcaccctcgtaaaatattttttttccggaaaacacccctaataggccatt 13236897  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #51
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 1 - 76
Target Start/End: Original strand, 18966730 - 18966805
Alignment:
Q  1 cccctattaaattttcggtttgatttgcaccctcgtaaaatttttattttccggtaaacacctttaatagaccatt 76  Q
    ||||||| ||||||| |||||||||||||||||||||||||||||||||||| | |||||||  |||||| |||||    
T  18966730 cccctataaaatttttggtttgatttgcaccctcgtaaaatttttattttccagaaaacacccctaataggccatt 18966805  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #52
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 1 - 76
Target Start/End: Complemental strand, 22422996 - 22422921
Alignment:
Q  1 cccctattaaattttcggtttgatttgcaccctcgtaaaatttttattttccggtaaacacctttaatagaccatt 76  Q
    ||||||| |||||||||||||||||||||||||| ||||||||||||||||||  |||||||  |||||| |||||    
T  22422996 cccctataaaattttcggtttgatttgcaccctcataaaatttttattttccgaaaaacacccctaataggccatt 22422921  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #53
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 2 - 96
Target Start/End: Original strand, 27926984 - 27927079
Alignment:
Q  2 ccctattaaattttcggtttgatttgcaccctcgtaaaatttttattttccggtaaacacctttaatagaccattc-aaaaccaaaattttttgaa 96  Q
    |||||| ||||||| |||||||||| |||||||||||| ||||||| |||||  ||||||| ||||||| |||||| ||||||||||||| |||||    
T  27926984 ccctataaaattttaggtttgattttcaccctcgtaaactttttatcttccgaaaaacacccttaataggccattcaaaaaccaaaatttcttgaa 27927079  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #54
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 1 - 76
Target Start/End: Complemental strand, 39257366 - 39257291
Alignment:
Q  1 cccctattaaattttcggtttgatttgcaccctcgtaaaatttttattttccggtaaacacctttaatagaccatt 76  Q
    ||||||| |||||||| |||||| |||||||||||||||||||||||||||||| |||||||  |||||| |||||    
T  39257366 cccctataaaattttcagtttgacttgcaccctcgtaaaatttttattttccggaaaacacccctaataggccatt 39257291  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #55
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 173 - 218
Target Start/End: Original strand, 17870411 - 17870456
Alignment:
Q  173 ggacgagccacatgcagggaaacttgcacgtgtggttctggccggg 218  Q
    ||||||||||||||||||||||||||||||||||||||||||||||    
T  17870411 ggacgagccacatgcagggaaacttgcacgtgtggttctggccggg 17870456  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #56
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 1 - 124
Target Start/End: Complemental strand, 24492726 - 24492594
Alignment:
Q  1 cccctattaaattttcggtttgatttgcaccctcgtaaaatttttattttccggtaaacacctttaatagaccattc-aaaaccaaaattttttgaa--- 96  Q
    ||||||| |||||||||||||| ||| |||| |||||||||||||||||| ||| ||||||| ||||||| |||||| |||| |||||||| |||||       
T  24492726 cccctataaaattttcggtttggttttcacc-tcgtaaaatttttatttttcggaaaacacccttaataggccattcaaaaatcaaaatttcttgaaaaa 24492628  T
Q  97 ------ctgaaaatgacctattaggggtgttttt 124  Q
          ||||||||| ||||||||||||||||||    
T  24492627 aaaaatctgaaaatggcctattaggggtgttttt 24492594  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #57
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 9 - 62
Target Start/End: Original strand, 28192355 - 28192408
Alignment:
Q  9 aaattttcggtttgatttgcaccctcgtaaaatttttattttccggtaaacacc 62  Q
    ||||||||||||||||||||||||| |||||||||||||||||||| |||||||    
T  28192355 aaattttcggtttgatttgcacccttgtaaaatttttattttccggaaaacacc 28192408  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #58
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 1 - 53
Target Start/End: Original strand, 7511397 - 7511449
Alignment:
Q  1 cccctattaaattttcggtttgatttgcaccctcgtaaaatttttattttccg 53  Q
    ||||||| |||||||||||||||||||||||||||||||| ||||||||||||    
T  7511397 cccctataaaattttcggtttgatttgcaccctcgtaaaacttttattttccg 7511449  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #59
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 1 - 53
Target Start/End: Original strand, 7515681 - 7515733
Alignment:
Q  1 cccctattaaattttcggtttgatttgcaccctcgtaaaatttttattttccg 53  Q
    ||||||| |||||||||||||||||||||||||||||||| ||||||||||||    
T  7515681 cccctataaaattttcggtttgatttgcaccctcgtaaaacttttattttccg 7515733  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #60
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 9 - 96
Target Start/End: Original strand, 9273593 - 9273681
Alignment:
Q  9 aaattttcggtttgatttgcaccctcgtaaaatttttattttccggtaaacacctttaatagaccattc-aaaaccaaaattttttgaa 96  Q
    ||||||| ||||||||||||| ||||||||||| ||| |||| ||| ||||||| ||||||| |||||| ||||||||||||| |||||    
T  9273593 aaatttttggtttgatttgcatcctcgtaaaatatttttttttcggaaaacacccttaataggccattcaaaaaccaaaatttcttgaa 9273681  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #61
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 1 - 76
Target Start/End: Original strand, 3328980 - 3329055
Alignment:
Q  1 cccctattaaattttcggtttgatttgcaccctcgtaaaatttttattttccggtaaacacctttaatagaccatt 76  Q
    ||||||| ||||||||||||| ||||||||| ||||||||||||||||||| || |||||||  |||||| |||||    
T  3328980 cccctataaaattttcggtttaatttgcaccatcgtaaaatttttattttctggaaaacacccctaatagcccatt 3329055  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #62
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 1 - 76
Target Start/End: Complemental strand, 24388839 - 24388764
Alignment:
Q  1 cccctattaaattttcggtttgatttgcaccctcgtaaaatttttattttccggtaaacacctttaatagaccatt 76  Q
    ||||||| |||||||||||||||||||||| || |||||| ||||||||||||| |||||||  |||||| |||||    
T  24388839 cccctataaaattttcggtttgatttgcactcttgtaaaaattttattttccggaaaacacccctaataggccatt 24388764  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #63
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 1 - 76
Target Start/End: Complemental strand, 25301545 - 25301470
Alignment:
Q  1 cccctattaaattttcggtttgatttgcaccctcgtaaaatttttattttccggtaaacacctttaatagaccatt 76  Q
    ||||||| ||||||||||||||||||||||||||||||||  || ||||||| | |||||||| |||||| |||||    
T  25301545 cccctataaaattttcggtttgatttgcaccctcgtaaaaaattaattttccagaaaacacctctaatagcccatt 25301470  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #64
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 1 - 52
Target Start/End: Complemental strand, 36202354 - 36202303
Alignment:
Q  1 cccctattaaattttcggtttgatttgcaccctcgtaaaatttttattttcc 52  Q
    ||||||| ||||||||| ||||||||||||||||||||||||||||||||||    
T  36202354 cccctataaaattttcgatttgatttgcaccctcgtaaaatttttattttcc 36202303  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #65
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 1 - 76
Target Start/End: Original strand, 39615633 - 39615708
Alignment:
Q  1 cccctattaaattttcggtttgatttgcaccctcgtaaaatttttattttccggtaaacacctttaatagaccatt 76  Q
    ||||||| ||||||| ||||||||||||| |||||||||||||||||||||| | |||||||  |||||| |||||    
T  39615633 cccctataaaatttttggtttgatttgcatcctcgtaaaatttttattttccagaaaacacccctaataggccatt 39615708  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #66
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 1 - 52
Target Start/End: Original strand, 43209225 - 43209276
Alignment:
Q  1 cccctattaaattttcggtttgatttgcaccctcgtaaaatttttattttcc 52  Q
    ||||||| |||||||| |||||||||||||||||||||||||||||||||||    
T  43209225 cccctataaaattttcagtttgatttgcaccctcgtaaaatttttattttcc 43209276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #67
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 2 - 76
Target Start/End: Original strand, 20100810 - 20100884
Alignment:
Q  2 ccctattaaattttcggtttgatttgcaccctcgtaaaatttttattttccggtaaacacctttaatagaccatt 76  Q
    |||||| |||||||||||||||||| ||||||||||||||||||||||| | | |||||||  |||||| |||||    
T  20100810 ccctataaaattttcggtttgatttacaccctcgtaaaatttttatttttcagaaaacacccctaataggccatt 20100884  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #68
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 2 - 76
Target Start/End: Original strand, 34963404 - 34963478
Alignment:
Q  2 ccctattaaattttcggtttgatttgcaccctcgtaaaatttttattttccggtaaacacctttaatagaccatt 76  Q
    |||||| ||||||||| |||||||||||||||||||||| ||||||||| ||| |||||||  |||||| |||||    
T  34963404 ccctataaaattttcgctttgatttgcaccctcgtaaaaattttatttttcggaaaacacccctaataggccatt 34963478  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #69
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 1 - 50
Target Start/End: Complemental strand, 20513903 - 20513854
Alignment:
Q  1 cccctattaaattttcggtttgatttgcaccctcgtaaaatttttatttt 50  Q
    ||||||| ||||||||||||||||||||||| ||||||||||||||||||    
T  20513903 cccctataaaattttcggtttgatttgcaccatcgtaaaatttttatttt 20513854  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #70
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 1 - 69
Target Start/End: Complemental strand, 9273770 - 9273702
Alignment:
Q  1 cccctattaaattttcggtttgatttgcaccctcgtaaaatttttattttccggtaaacacctttaata 69  Q
    ||||||| |||||||||||||||||||   |||||||||||||||||||||| | ||||||| ||||||    
T  9273770 cccctataaaattttcggtttgatttgtgtcctcgtaaaatttttattttccagaaaacacccttaata 9273702  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #71
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 9 - 76
Target Start/End: Original strand, 5528977 - 5529044
Alignment:
Q  9 aaattttcggtttgatttgcaccctcgtaaaatttttattttccggtaaacacctttaatagaccatt 76  Q
    |||||||||||||||||||| |||||||||||  |||||||||| | |||||||| |||||| |||||    
T  5528977 aaattttcggtttgatttgcgccctcgtaaaaaatttattttccagaaaacacctctaataggccatt 5529044  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #72
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 1 - 52
Target Start/End: Original strand, 30462232 - 30462283
Alignment:
Q  1 cccctattaaattttcggtttgatttgcaccctcgtaaaatttttattttcc 52  Q
    ||||||| |||||||||||||||||| ||||||||||||| |||||||||||    
T  30462232 cccctataaaattttcggtttgattttcaccctcgtaaaaattttattttcc 30462283  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #73
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 2 - 76
Target Start/End: Complemental strand, 13988003 - 13987929
Alignment:
Q  2 ccctattaaattttcggtttgatttgcaccctcgtaaaatttttattttccggtaaacacctttaatagaccatt 76  Q
    |||||| ||||||||||||| |||||   |||||||||| |||||||||| || ||||||||||||||| |||||    
T  13988003 ccctataaaattttcggtttaatttgtgtcctcgtaaaaattttattttcaggaaaacacctttaatagcccatt 13987929  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #74
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 2 - 76
Target Start/End: Complemental strand, 13993901 - 13993827
Alignment:
Q  2 ccctattaaattttcggtttgatttgcaccctcgtaaaatttttattttccggtaaacacctttaatagaccatt 76  Q
    |||||| ||||||||||||| |||||   |||||||||| |||||||||| || ||||||||||||||| |||||    
T  13993901 ccctataaaattttcggtttaatttgtgtcctcgtaaaaattttattttcaggaaaacacctttaatagcccatt 13993827  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #75
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 1 - 90
Target Start/End: Original strand, 24388655 - 24388744
Alignment:
Q  1 cccctattaaattttcggtttgatttgcaccctcgtaaaatttttattttccggtaaacacctttaatagaccattc-aaaaccaaaattt 90  Q
    ||||||| |||||||| |||||||||||||| ||||||||  |||||||||| | ||| ||| ||||||| |||||| |||||||||||||    
T  24388655 cccctataaaattttcagtttgatttgcaccttcgtaaaaaatttattttccag-aaaaacccttaataggccattcaaaaaccaaaattt 24388744  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #76
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 2 - 96
Target Start/End: Original strand, 13987819 - 13987915
Alignment:
Q  2 ccctattaaattttcggtttgatttgcaccctcgtaaaat-ttttattttccggtaaacacctttaatagaccattc-aaaaccaaaattttttgaa 96  Q
    |||||| ||||||| ||||||||||||| ||||||||||| | || |||| ||| ||||| | ||||||| |||||| ||||||||||||| |||||    
T  13987819 ccctataaaatttttggtttgatttgcatcctcgtaaaatatattttttttcggaaaacatccttaataggccattcaaaaaccaaaatttcttgaa 13987915  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #77
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 2 - 96
Target Start/End: Original strand, 13993717 - 13993813
Alignment:
Q  2 ccctattaaattttcggtttgatttgcaccctcgtaaaat-ttttattttccggtaaacacctttaatagaccattc-aaaaccaaaattttttgaa 96  Q
    |||||| ||||||| ||||||||||||| ||||||||||| | || |||| ||| ||||| | ||||||| |||||| ||||||||||||| |||||    
T  13993717 ccctataaaatttttggtttgatttgcatcctcgtaaaatatattttttttcggaaaacatccttaataggccattcaaaaaccaaaatttcttgaa 13993813  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #78
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 9 - 76
Target Start/End: Complemental strand, 1592055 - 1591988
Alignment:
Q  9 aaattttcggtttgatttgcaccctcgtaaaatttttattttccggtaaacacctttaatagaccatt 76  Q
    ||||||| |||||||||||||||||||||||| |||||||||  |  |||||||  ||||||||||||    
T  1592055 aaatttttggtttgatttgcaccctcgtaaaaattttattttttgaaaaacacccctaatagaccatt 1591988  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #79
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 1 - 60
Target Start/End: Complemental strand, 2532061 - 2532003
Alignment:
Q  1 cccctattaaattttcggtttgatttgcaccctcgtaaaatttttattttccggtaaaca 60  Q
    ||||||| ||||||||||||||||||||| ||||||||||| ||| |||||||| |||||    
T  2532061 cccctataaaattttcggtttgatttgcatcctcgtaaaatattt-ttttccggaaaaca 2532003  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #80
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 11 - 62
Target Start/End: Original strand, 20891656 - 20891707
Alignment:
Q  11 attttcggtttgatttgcaccctcgtaaaatttttattttccggtaaacacc 62  Q
    ||||||||||||||||||||||||||||||   ||||||||||| |||||||    
T  20891656 attttcggtttgatttgcaccctcgtaaaaaaattattttccggaaaacacc 20891707  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #81
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 10 - 49
Target Start/End: Original strand, 24492551 - 24492590
Alignment:
Q  10 aattttcggtttgatttgcaccctcgtaaaatttttattt 49  Q
    |||||||||||||||||||||||||||||| |||||||||    
T  24492551 aattttcggtttgatttgcaccctcgtaaattttttattt 24492590  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #82
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 1 - 76
Target Start/End: Original strand, 40926729 - 40926804
Alignment:
Q  1 cccctattaaattttcggtttgatttgcaccctcgtaaaatttttattttccggtaaacacctttaatagaccatt 76  Q
    ||||||| ||||||||||||||||||| ||||||||||  ||||| | |||||| |||||||  |||||| |||||    
T  40926729 cccctataaaattttcggtttgatttgtaccctcgtaatttttttttcttccggaaaacacccctaataggccatt 40926804  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #83
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 1 - 59
Target Start/End: Original strand, 2077094 - 2077151
Alignment:
Q  1 cccctattaaattttcggtttgatttgcaccctcgtaaaatttttattttccggtaaac 59  Q
    ||||||| |||||||||||||||||||| ||||||||||| || |||||||||| ||||    
T  2077094 cccctataaaattttcggtttgatttgctccctcgtaaaa-ttatattttccggaaaac 2077151  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #84
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 1 - 62
Target Start/End: Original strand, 27197794 - 27197855
Alignment:
Q  1 cccctattaaattttcggtttgatttgcaccctcgtaaaatttttattttccggtaaacacc 62  Q
    ||||||| ||||||||||||||||||||| ||| |||||| |||| |||||| | |||||||    
T  27197794 cccctataaaattttcggtttgatttgcatccttgtaaaactttttttttccagaaaacacc 27197855  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #85
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 1 - 62
Target Start/End: Original strand, 27853221 - 27853282
Alignment:
Q  1 cccctattaaattttcggtttgatttgcaccctcgtaaaatttttattttccggtaaacacc 62  Q
    ||||||| ||||||||||||||||||||| ||| |||||| |||| |||||| | |||||||    
T  27853221 cccctataaaattttcggtttgatttgcatccttgtaaaactttttttttccagaaaacacc 27853282  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #86
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 13 - 50
Target Start/End: Original strand, 35192241 - 35192278
Alignment:
Q  13 tttcggtttgatttgcaccctcgtaaaatttttatttt 50  Q
    ||||||||||||||||||||| ||||||||||||||||    
T  35192241 tttcggtttgatttgcacccttgtaaaatttttatttt 35192278  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #87
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 1 - 128
Target Start/End: Complemental strand, 35741280 - 35741146
Alignment:
Q  1 cccctattaaattttcggtttgatttgcaccctcgtaaaatttttattttccggtaaacacctttaatagaccattc-aaaaccaaaattttttgaa--- 96  Q
    ||||||| ||||||||||||||||||||| ||||||||||   | ||  | ||  ||||||||||||||| |||||| ||||||||||||| |||||       
T  35741280 cccctatcaaattttcggtttgatttgcatcctcgtaaaaaaataataat-cgaaaaacacctttaataggccattcaaaaaccaaaatttcttgaaaaa 35741182  T
Q  97 ----ctgaaaatgacctattaggggtgtttttcgga 128  Q
        || |||||| ||||||||||||||||| ||||    
T  35741181 aattctaaaaatggcctattaggggtgttttccgga 35741146  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #88
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 9 - 62
Target Start/End: Complemental strand, 43441782 - 43441729
Alignment:
Q  9 aaattttcggtttgatttgcaccctcgtaaaatttttattttccggtaaacacc 62  Q
    ||||||||||||||||||||| ||| |||||| |||| |||||||| |||||||    
T  43441782 aaattttcggtttgatttgcatccttgtaaaactttttttttccggaaaacacc 43441729  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #89
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 12 - 76
Target Start/End: Complemental strand, 1320827 - 1320763
Alignment:
Q  12 ttttcggtttgatttgcaccctcgtaaaatttttattttccggtaaacacctttaatagaccatt 76  Q
    |||||||||||||||||| | | |||||||||||||||||||  |||||||  |||||| |||||    
T  1320827 ttttcggtttgatttgcatcattgtaaaatttttattttccgaaaaacacccctaataggccatt 1320763  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #90
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 3 - 76
Target Start/End: Original strand, 8972716 - 8972791
Alignment:
Q  3 cctattaaattttcggtttgatttgcaccctcgtaaaatttttatt--ttccggtaaacacctttaatagaccatt 76  Q
    ||||| |||||||||||||||||||||| |||||||| ||||| ||  |||||| |||||||  |||||| |||||    
T  8972716 cctataaaattttcggtttgatttgcactctcgtaaattttttttttcttccggaaaacacccctaataggccatt 8972791  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #91
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 2 - 50
Target Start/End: Original strand, 38232628 - 38232676
Alignment:
Q  2 ccctattaaattttcggtttgatttgcaccctcgtaaaatttttatttt 50  Q
    |||||| || |||| | ||||||||||||||||||||||||||||||||    
T  38232628 ccctataaattttttgatttgatttgcaccctcgtaaaatttttatttt 38232676  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #92
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 1 - 40
Target Start/End: Original strand, 2531869 - 2531908
Alignment:
Q  1 cccctattaaattttcggtttgatttgcaccctcgtaaaa 40  Q
    ||||||| ||||||||||||||||||||| ||||||||||    
T  2531869 cccctataaaattttcggtttgatttgcatcctcgtaaaa 2531908  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #93
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 1 - 40
Target Start/End: Original strand, 6748797 - 6748836
Alignment:
Q  1 cccctattaaattttcggtttgatttgcaccctcgtaaaa 40  Q
    ||||||| ||||||| ||||||||||||||||||||||||    
T  6748797 cccctataaaatttttggtttgatttgcaccctcgtaaaa 6748836  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #94
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 1 - 40
Target Start/End: Complemental strand, 14274459 - 14274420
Alignment:
Q  1 cccctattaaattttcggtttgatttgcaccctcgtaaaa 40  Q
    ||||||| ||||||| ||||||||||||||||||||||||    
T  14274459 cccctataaaatttttggtttgatttgcaccctcgtaaaa 14274420  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #95
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 1 - 40
Target Start/End: Complemental strand, 20025555 - 20025516
Alignment:
Q  1 cccctattaaattttcggtttgatttgcaccctcgtaaaa 40  Q
    ||||||| |||||||| |||||||||||||||||||||||    
T  20025555 cccctataaaattttcagtttgatttgcaccctcgtaaaa 20025516  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #96
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 1 - 40
Target Start/End: Complemental strand, 20962279 - 20962240
Alignment:
Q  1 cccctattaaattttcggtttgatttgcaccctcgtaaaa 40  Q
    ||||||| ||||||||||||||||||||| ||||||||||    
T  20962279 cccctataaaattttcggtttgatttgcatcctcgtaaaa 20962240  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #97
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 1 - 76
Target Start/End: Complemental strand, 26502600 - 26502525
Alignment:
Q  1 cccctattaaattttcggtttgatttgcaccctcgtaaaatttttattttccggtaaacacctttaatagaccatt 76  Q
    ||||||| |||||||| |||||||||||| ||||||||  | ||| |||||| |||||||||  |||||| |||||    
T  26502600 cccctataaaattttccgtttgatttgcatcctcgtaatttattttttttccagtaaacacccctaataggccatt 26502525  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #98
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 11 - 45
Target Start/End: Original strand, 5792462 - 5792496
Alignment:
Q  11 attttcggtttgatttgcaccctcgtaaaattttt 45  Q
    ||||||||||||||||||||||||||||| |||||    
T  5792462 attttcggtttgatttgcaccctcgtaaatttttt 5792496  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #99
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 9 - 62
Target Start/End: Original strand, 43440531 - 43440584
Alignment:
Q  9 aaattttcggtttgatttgcaccctcgtaaaatttttattttccggtaaacacc 62  Q
    ||||||| ||||||||||||| ||| |||||| |||| |||||||| |||||||    
T  43440531 aaatttttggtttgatttgcatccttgtaaaactttttttttccggaaaacacc 43440584  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #100
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 1 - 40
Target Start/End: Complemental strand, 35192425 - 35192385
Alignment:
Q  1 cccctattaaattttcggtttgatttg-caccctcgtaaaa 40  Q
    ||||||| ||||||||||||||||||| |||||||||||||    
T  35192425 cccctataaaattttcggtttgatttgtcaccctcgtaaaa 35192385  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 72; Significance: 1e-32; HSPs: 76)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 1 - 128
Target Start/End: Complemental strand, 23352235 - 23352099
Alignment:
Q  1 cccctattaaattttcggtttgatttgcaccctcgtaaaatttttattttccggtaaacacctttaatagaccattc-aaaaccaaaattttttgaa--- 96  Q
    ||||||| |||||||||||||||||||||||||||||||||||||||||||||| ||||||| ||||||| |||||| ||||||||||||| |||||       
T  23352235 cccctataaaattttcggtttgatttgcaccctcgtaaaatttttattttccggaaaacacccttaataggccattcaaaaaccaaaatttcttgaaaaa 23352136  T
Q  97 -----ctgaaaatgacctattaggggtgtttttcgga 128  Q
         ||||||||| ||||||||||||||||| ||||    
T  23352135 aaattctgaaaatggcctattaggggtgttttccgga 23352099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 69; E-Value: 6e-31
Query Start/End: Original strand, 2 - 128
Target Start/End: Original strand, 18609321 - 18609455
Alignment:
Q  2 ccctattaaattttcggtttgatttgcaccctcgtaaaatttttattttccggtaaacacctttaatagaccattc-aaaaccaaaattttttgaa---- 96  Q
    |||||| ||||||||||||||||||||||||||||||| |||||||||||||| ||||||| ||||||| |||||| ||||||||||||| |||||        
T  18609321 ccctataaaattttcggtttgatttgcaccctcgtaaattttttattttccggaaaacacccttaataggccattcaaaaaccaaaatttcttgaaaaaa 18609420  T
Q  97 ---ctgaaaatgacctattaggggtgtttttcgga 128  Q
       ||||||||| ||||||||||||||||| ||||    
T  18609421 attctgaaaatggcctattaggggtgttttccgga 18609455  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 1 - 128
Target Start/End: Original strand, 5385579 - 5385715
Alignment:
Q  1 cccctattaaattttcggtttgatttgcaccctcgtaaaatttttattttccggtaaacacctttaatagaccattc-aaaaccaaaattttttgaa--- 96  Q
    ||||||| |||||||||||||||||| ||||||||||||||||||||||||||| ||||||| ||||||| |||| | ||||||||||||| |||||       
T  5385579 cccctataaaattttcggtttgattttcaccctcgtaaaatttttattttccggaaaacacccttaataggccatccaaaaaccaaaatttcttgaaaaa 5385678  T
Q  97 -----ctgaaaatgacctattaggggtgtttttcgga 128  Q
         ||||||||| ||||||||||||||||||||||    
T  5385679 aaattctgaaaatggcctattaggggtgtttttcgga 5385715  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 64; E-Value: 6e-28
Query Start/End: Original strand, 3 - 128
Target Start/End: Complemental strand, 16669488 - 16669355
Alignment:
Q  3 cctattaaattttcggtttgatttgcaccctcgtaaaatttttattttccggtaaacacctttaatagaccattc-aaaaccaaaattttttgaa----- 96  Q
    ||||| |||||||||||||||||| ||||||||||||| ||||||||||||| ||||||| ||||||| |||||| ||||||||||||| |||||         
T  16669488 cctataaaattttcggtttgattttcaccctcgtaaaaattttattttccggaaaacacccttaataggccattcaaaaaccaaaatttcttgaaaaaaa 16669389  T
Q  97 --ctgaaaatgacctattaggggtgtttttcgga 128  Q
      ||||||||| ||||||||||||||||| ||||    
T  16669388 ttctgaaaatggcctattaggggtgttttccgga 16669355  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 2 - 128
Target Start/End: Complemental strand, 17159344 - 17159210
Alignment:
Q  2 ccctattaaattttcggtttgatttgcaccctcgtaaaatttttattttccggtaaacacctttaatagaccattc-aaaaccaaaattttttgaa---- 96  Q
    |||||| |||||||||||||||||||||||||||||||||||||||||||||  ||||||| |||||||  ||||| ||||||||||||| |||||        
T  17159344 ccctataaaattttcggtttgatttgcaccctcgtaaaatttttattttccgaaaaacacccttaataggtcattcaaaaaccaaaatttcttgaaaaaa 17159245  T
Q  97 ---ctgaaaatgacctattaggggtgtttttcgga 128  Q
       || |||||| |||||||||| |||||||||||    
T  17159244 attctaaaaatggcctattagggttgtttttcgga 17159210  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 11 - 123
Target Start/End: Complemental strand, 43681440 - 43681319
Alignment:
Q  11 attttcggtttgatttgcaccctcgtaaaatttttattttccggtaaacacctttaatagaccattc-aaaaccaaaattttttgaa--------ctgaa 101  Q
    |||| ||||||||||||||||||||||||||||||||||||||| ||||||| ||||||| |||||| ||||||||||||| |||||        |||||    
T  43681440 atttccggtttgatttgcaccctcgtaaaatttttattttccggaaaacacccttaatagcccattcaaaaaccaaaatttcttgaaaaaaaattctgaa 43681341  T
Q  102 aatgacctattaggggtgtttt 123  Q
    |||| |||||||||||||||||    
T  43681340 aatggcctattaggggtgtttt 43681319  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 2 - 96
Target Start/End: Original strand, 28004691 - 28004786
Alignment:
Q  2 ccctattaaattttcggtttgatttgcaccctcgtaaaatttttattttccggtaaacacctttaatagaccattc-aaaaccaaaattttttgaa 96  Q
    |||||| |||||||||||||||||||||||||||||||||||||||||||||  ||||||  ||||||| |||||| ||||||||||||| |||||    
T  28004691 ccctataaaattttcggtttgatttgcaccctcgtaaaatttttattttccgaaaaacactcttaataggccattcaaaaaccaaaatttcttgaa 28004786  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 2 - 96
Target Start/End: Original strand, 28061993 - 28062088
Alignment:
Q  2 ccctattaaattttcggtttgatttgcaccctcgtaaaatttttattttccggtaaacacctttaatagaccattc-aaaaccaaaattttttgaa 96  Q
    |||||| |||||||||||||||||||||||||||||||||||||||||||||  ||||||  ||||||| |||||| ||||||||||||| |||||    
T  28061993 ccctataaaattttcggtttgatttgcaccctcgtaaaatttttattttccgaaaaacactcttaataggccattcaaaaaccaaaatttcttgaa 28062088  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 59; E-Value: 6e-25
Query Start/End: Original strand, 1 - 123
Target Start/End: Original strand, 7595280 - 7595411
Alignment:
Q  1 cccctattaaattttcggtttgatttgcaccctcgtaaaatttttattttccggtaaacacctttaatagaccattc-aaaaccaaaattttttgaa--- 96  Q
    ||||||| |||||||| |||||||||||||| |||||||||||||||||||| | ||||||| ||||||| |||||| ||||||||||||| |||||       
T  7595280 cccctataaaattttcagtttgatttgcaccatcgtaaaatttttattttccagaaaacaccattaataggccattcaaaaaccaaaatttcttgaaaaa 7595379  T
Q  97 -----ctgaaaatgacctattaggggtgtttt 123  Q
         ||||||||| |||||||||||||||||    
T  7595380 aaatcctgaaaatggcctattaggggtgtttt 7595411  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 57; E-Value: 9e-24
Query Start/End: Original strand, 1 - 81
Target Start/End: Original strand, 222666 - 222746
Alignment:
Q  1 cccctattaaattttcggtttgatttgcaccctcgtaaaatttttattttccggtaaacacctttaatagaccattcaaaa 81  Q
    ||||||| ||||||||||||||||||||||||||||||||  |||||||||||| ||||||| ||||||| ||||||||||    
T  222666 cccctataaaattttcggtttgatttgcaccctcgtaaaaaatttattttccggaaaacacccttaataggccattcaaaa 222746  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 57; E-Value: 9e-24
Query Start/End: Original strand, 1 - 81
Target Start/End: Original strand, 691821 - 691901
Alignment:
Q  1 cccctattaaattttcggtttgatttgcaccctcgtaaaatttttattttccggtaaacacctttaatagaccattcaaaa 81  Q
    ||||||| ||||||||||||||||||||||||||||||||  |||||||||||| ||||||| ||||||| ||||||||||    
T  691821 cccctataaaattttcggtttgatttgcaccctcgtaaaaaatttattttccggaaaacacccttaataggccattcaaaa 691901  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 57; E-Value: 9e-24
Query Start/End: Original strand, 1 - 81
Target Start/End: Original strand, 736289 - 736369
Alignment:
Q  1 cccctattaaattttcggtttgatttgcaccctcgtaaaatttttattttccggtaaacacctttaatagaccattcaaaa 81  Q
    ||||||| ||||||||||||||||||||||||||||||||  |||||||||||| ||||||| ||||||| ||||||||||    
T  736289 cccctataaaattttcggtttgatttgcaccctcgtaaaaaatttattttccggaaaacacccttaataggccattcaaaa 736369  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 57; E-Value: 9e-24
Query Start/End: Original strand, 1 - 81
Target Start/End: Original strand, 860184 - 860264
Alignment:
Q  1 cccctattaaattttcggtttgatttgcaccctcgtaaaatttttattttccggtaaacacctttaatagaccattcaaaa 81  Q
    ||||||| ||||||||||||||||||||||||||||||||  |||||||||||| ||||||| ||||||| ||||||||||    
T  860184 cccctataaaattttcggtttgatttgcaccctcgtaaaaaatttattttccggaaaacacccttaataggccattcaaaa 860264  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 57; E-Value: 9e-24
Query Start/End: Original strand, 1 - 128
Target Start/End: Original strand, 2672039 - 2672162
Alignment:
Q  1 cccctattaaattttcggtttgatttgcaccctcgtaaaatttttattttccggtaaacacctttaatagaccattc-aaaaccaaaattttttgaactg 99  Q
    ||||||| |||||||||||||| |||||||||| |||||| ||||||||||||| ||||||| ||||||| || ||| ||||||||||||| |     ||    
T  2672039 cccctataaaattttcggtttgttttgcacccttgtaaaaattttattttccggaaaacacccttaataggcctttcaaaaaccaaaatttct-----tg 2672133  T
Q  100 aaaatgacctattaggggtgtttttcgga 128  Q
    |||||| ||||||||||||||||| ||||    
T  2672134 aaaatggcctattaggggtgttttccgga 2672162  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 57; E-Value: 9e-24
Query Start/End: Original strand, 9 - 96
Target Start/End: Original strand, 18845100 - 18845188
Alignment:
Q  9 aaattttcggtttgatttgcaccctcgtaaaatttttattttccggtaaacacctttaatagaccattc-aaaaccaaaattttttgaa 96  Q
    |||||||||||||||||| ||||||||||||||||||||||| ||  ||||||||||||||| |||||| ||||||||||||| |||||    
T  18845100 aaattttcggtttgattttcaccctcgtaaaatttttatttttcgaaaaacacctttaataggccattcaaaaaccaaaatttcttgaa 18845188  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 57; E-Value: 9e-24
Query Start/End: Original strand, 1 - 96
Target Start/End: Original strand, 31957352 - 31957447
Alignment:
Q  1 cccctattaaattttcggtttgatttgcaccctcgtaaaatttttattttccggtaaacacctttaatagaccattc-aaaaccaaaattttttgaa 96  Q
    ||||||| ||||||||||||||||||||||||||| |||||||||||||||||  ||||||| ||||||| |||||| ||||||||||||| |||||    
T  31957352 cccctataaaattttcggtttgatttgcaccctcg-aaaatttttattttccgaaaaacacccttaataggccattcaaaaaccaaaatttcttgaa 31957447  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 1 - 76
Target Start/End: Complemental strand, 2672211 - 2672136
Alignment:
Q  1 cccctattaaattttcggtttgatttgcaccctcgtaaaatttttattttccggtaaacacctttaatagaccatt 76  Q
    ||||||| |||||||||||||||||||||||||||||||||||||||||||||| |||||||  |||||| |||||    
T  2672211 cccctataaaattttcggtttgatttgcaccctcgtaaaatttttattttccggaaaacacccctaataggccatt 2672136  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 2 - 96
Target Start/End: Complemental strand, 28898973 - 28898878
Alignment:
Q  2 ccctattaaattttcggtttgatttgcaccctcgtaaaatttttattttccggtaaacacctttaatagaccattc-aaaaccaaaattttttgaa 96  Q
    |||||| |||| |||||||||||||||| |||||||||||||||||||||||  ||||||| ||||||| |||||| ||||||||||||| |||||    
T  28898973 ccctataaaatattcggtttgatttgcatcctcgtaaaatttttattttccgaaaaacacccttaataggccattcaaaaaccaaaatttcttgaa 28898878  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 2 - 96
Target Start/End: Complemental strand, 40774083 - 40773988
Alignment:
Q  2 ccctattaaattttcggtttgatttgcaccctcgtaaaatttttattttccggtaaacacctttaatagaccattcaaaa-ccaaaattttttgaa 96  Q
    |||||| |||||||| ||||||||||||||||||||||||||||||||||  | ||||||| ||||||| |||||||||| ||||||||| |||||    
T  40774083 ccctataaaattttcagtttgatttgcaccctcgtaaaatttttattttctagaaaacacccttaataggccattcaaaagccaaaatttcttgaa 40773988  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 1 - 123
Target Start/End: Complemental strand, 42933282 - 42933151
Alignment:
Q  1 cccctattaaattttcggtttgatttgcaccctcgtaaaatttttattttccggtaaacacctttaatagaccattc-aaaaccaaaattttttgaa--- 96  Q
    ||||||| |||||||||||||||||||||||||||||||||| |||||||| || ||||| | ||||||| |||||| |||| |||||||| |||||       
T  42933282 cccctataaaattttcggtttgatttgcaccctcgtaaaattattattttcaggaaaacatccttaataggccattcaaaaatcaaaatttcttgaaaaa 42933183  T
Q  97 -----ctgaaaatgacctattaggggtgtttt 123  Q
         ||||||||| |||||||||||||||||    
T  42933182 aaattctgaaaatggcctattaggggtgtttt 42933151  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 9 - 96
Target Start/End: Original strand, 116675 - 116763
Alignment:
Q  9 aaattttcggtttgatttgcaccctcgtaaaatttttattttccggtaaacacctttaatagaccattc-aaaaccaaaattttttgaa 96  Q
    ||||||||||||||||||||| | |||||||||||||||||| ||| ||||||| ||||||| |||||| ||||| |||||||||||||    
T  116675 aaattttcggtttgatttgcatcatcgtaaaatttttatttttcggaaaacacccttaataggccattcaaaaactaaaattttttgaa 116763  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 1 - 81
Target Start/End: Original strand, 17749911 - 17749991
Alignment:
Q  1 cccctattaaattttcggtttgatttgcaccctcgtaaaatttttattttccggtaaacacctttaatagaccattcaaaa 81  Q
    ||||||| ||||||||||||||||||||||| |||||||| ||||||||||||  ||||||| ||||||| ||||||||||    
T  17749911 cccctataaaattttcggtttgatttgcaccttcgtaaaaattttattttccgaaaaacacccttaataggccattcaaaa 17749991  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 2 - 128
Target Start/End: Original strand, 37597753 - 37597887
Alignment:
Q  2 ccctattaaattttcggtttgatttgcaccctcgtaaaatttttattttccggtaaacacctttaatagaccattc-aaaaccaaaattttttgaa---- 96  Q
    |||||| ||||||||||||||||||||||||||||||||  |||||||| ||  ||||||||||||||| | |||| |||| |||||||| |||||        
T  37597753 ccctataaaattttcggtttgatttgcaccctcgtaaaaaatttatttttcgaaaaacacctttaataggcaattcaaaaatcaaaatttcttgaaataa 37597852  T
Q  97 ---ctgaaaatgacctattaggggtgtttttcgga 128  Q
       ||||||||| ||||||||||||||||| ||||    
T  37597853 aatctgaaaatggcctattaggggtgttttccgga 37597887  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 1 - 128
Target Start/End: Original strand, 10760979 - 10761114
Alignment:
Q  1 cccctattaaattttcggtttgatttgcaccctcgtaaaatttttattttccggtaaacacctttaatagaccattc-aaaaccaaaattttttgaa--- 96  Q
    ||||||| |||||||||||||||||||||||||||| || || || |||||||| ||||||| ||||||| |||||| ||||||||||||| |||||       
T  10760979 cccctataaaattttcggtttgatttgcaccctcgt-aatttatttttttccggaaaacacccttaataggccattcaaaaaccaaaatttcttgaaaaa 10761077  T
Q  97 -----ctgaaaatgacctattaggggtgtttttcgga 128  Q
         ||||||||| ||||||||||||||||| ||||    
T  10761078 aaattctgaaaatggcctattaggggtgttttccgga 10761114  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 1 - 128
Target Start/End: Original strand, 21589889 - 21590025
Alignment:
Q  1 cccctattaaattttcggtttgatttgcaccctcgtaaaatttttattttccggtaaacacctttaatagaccattc-aaaaccaaaattttttgaa--- 96  Q
    ||||||| ||||||||||||||| || ||||||||||||| ||||||||| ||  ||||||| ||||||| |||||| ||||||||||||| |||||       
T  21589889 cccctataaaattttcggtttgaatttcaccctcgtaaaaattttatttttcgaaaaacacccttaataggccattcaaaaaccaaaatttcttgaaaaa 21589988  T
Q  97 -----ctgaaaatgacctattaggggtgtttttcgga 128  Q
         ||||||||| ||||||||||||||||| ||||    
T  21589989 aaattctgaaaatggcctattaggggtgttttccgga 21590025  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 1 - 76
Target Start/End: Complemental strand, 28004876 - 28004801
Alignment:
Q  1 cccctattaaattttcggtttgatttgcaccctcgtaaaatttttattttccggtaaacacctttaatagaccatt 76  Q
    ||||||| ||||||||||||||||||||| |||||||||||||||||||||| | |||||||| |||||| |||||    
T  28004876 cccctataaaattttcggtttgatttgcatcctcgtaaaatttttattttccagaaaacacctctaataggccatt 28004801  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 1 - 76
Target Start/End: Complemental strand, 28062178 - 28062103
Alignment:
Q  1 cccctattaaattttcggtttgatttgcaccctcgtaaaatttttattttccggtaaacacctttaatagaccatt 76  Q
    ||||||| ||||||||||||||||||||| |||||||||||||||||||||| | |||||||| |||||| |||||    
T  28062178 cccctataaaattttcggtttgatttgcatcctcgtaaaatttttattttccagaaaacacctctaataggccatt 28062103  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 11 - 96
Target Start/End: Original strand, 6162982 - 6163068
Alignment:
Q  11 attttcggtttgatttgcaccctcgtaaaatttttattttccggtaaacacctttaatagaccattc-aaaaccaaaattttttgaa 96  Q
    |||||||||||||||||| | ||| ||||||||||||||||||| ||||||| ||||||| |||||| ||||||||||||| |||||    
T  6162982 attttcggtttgatttgcgctctcataaaatttttattttccggaaaacacccttaataggccattcaaaaaccaaaatttcttgaa 6163068  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 2 - 76
Target Start/End: Original strand, 16669307 - 16669381
Alignment:
Q  2 ccctattaaattttcggtttgatttgcaccctcgtaaaatttttattttccggtaaacacctttaatagaccatt 76  Q
    |||||| ||||||| |||||||||||||||||||||||||||||||||||||| |||||||  |||||| |||||    
T  16669307 ccctataaaatttttggtttgatttgcaccctcgtaaaatttttattttccggaaaacacccctaataggccatt 16669381  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 1 - 90
Target Start/End: Complemental strand, 36574638 - 36574548
Alignment:
Q  1 cccctattaaattttcggtttgatttgcaccctcgtaaaatttttattttccggtaaacacctttaatagaccattc-aaaaccaaaattt 90  Q
    ||||||| |||||||||||||||||| ||||||||||||| ||||||||||| | || |||| ||||||| |||||| |||||||||||||    
T  36574638 cccctataaaattttcggtttgattttcaccctcgtaaaaattttattttccagaaatcacccttaataggccattcaaaaaccaaaattt 36574548  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 12 - 96
Target Start/End: Complemental strand, 9500982 - 9500897
Alignment:
Q  12 ttttcggtttgatttgcaccctcgtaaaatttttattttccggtaaacacctttaatagaccattc-aaaaccaaaattttttgaa 96  Q
    |||| ||||||||||||| | |||||||||||||||||||||  ||||||| ||||||| |||||| |||||||||||||||||||    
T  9500982 tttttggtttgatttgcatcatcgtaaaatttttattttccgaaaaacacccttaataggccattcaaaaaccaaaattttttgaa 9500897  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 1 - 76
Target Start/End: Complemental strand, 5385764 - 5385689
Alignment:
Q  1 cccctattaaattttcggtttgatttgcaccctcgtaaaatttttattttccggtaaacacctttaatagaccatt 76  Q
    ||||||| ||||||||||||||||||||||| |||||||||||||||||||||  |||||||  |||||| |||||    
T  5385764 cccctataaaattttcggtttgatttgcaccatcgtaaaatttttattttccgaaaaacacccctaataggccatt 5385689  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 1 - 76
Target Start/End: Complemental strand, 10761163 - 10761088
Alignment:
Q  1 cccctattaaattttcggtttgatttgcaccctcgtaaaatttttattttccggtaaacacctttaatagaccatt 76  Q
    ||||||| ||||||||||||||||||||||||| |||||| ||||||||||||| |||||||  |||||| |||||    
T  10761163 cccctataaaattttcggtttgatttgcacccttgtaaaaattttattttccggaaaacacccctaataggccatt 10761088  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 1 - 76
Target Start/End: Original strand, 15113925 - 15114000
Alignment:
Q  1 cccctattaaattttcggtttgatttgcaccctcgtaaaatttttattttccggtaaacacctttaatagaccatt 76  Q
    ||||||| ||||||||||||||||||||||||| |||||||||||||||| ||  ||||||| ||||||| |||||    
T  15113925 cccctataaaattttcggtttgatttgcacccttgtaaaatttttatttttcgaaaaacacccttaataggccatt 15114000  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 9 - 76
Target Start/End: Original strand, 23382730 - 23382797
Alignment:
Q  9 aaattttcggtttgatttgcaccctcgtaaaatttttattttccggtaaacacctttaatagaccatt 76  Q
    ||||||||||||||||||||| |||||||||| ||||||||||||| ||||||| ||||||| |||||    
T  23382730 aaattttcggtttgatttgcatcctcgtaaaaattttattttccggaaaacacccttaataggccatt 23382797  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 1 - 76
Target Start/End: Original strand, 43681265 - 43681340
Alignment:
Q  1 cccctattaaattttcggtttgatttgcaccctcgtaaaatttttattttccggtaaacacctttaatagaccatt 76  Q
    ||||||| |||||||||||||||||||||||||||||||| ||||||||||| | |||||||  |||||| |||||    
T  43681265 cccctataaaattttcggtttgatttgcaccctcgtaaaaattttattttccagaaaacacccctaataggccatt 43681340  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 2 - 124
Target Start/End: Complemental strand, 11296733 - 11296602
Alignment:
Q  2 ccctattaaattttcggtttgatttgcaccctcgtaaaatttttattttccggtaaacacctttaatagaccattc-aaaaccaaaattttttgaa---- 96  Q
    |||||| ||||||||||||| |||| |||||||||||||||||||||||||   | |||||  |||||| |||||| ||||||||||||| |||||        
T  11296733 ccctataaaattttcggtttaatttacaccctcgtaaaatttttattttccaaaagacacccataataggccattcaaaaaccaaaatttcttgaaaaaa 11296634  T
Q  97 ----ctgaaaatgacctattaggggtgttttt 124  Q
        ||||||||| ||||||||||||||||||    
T  11296633 aattctgaaaatggcctattaggggtgttttt 11296602  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 3 - 76
Target Start/End: Complemental strand, 22981042 - 22980969
Alignment:
Q  3 cctattaaattttcggtttgatttgcaccctcgtaaaatttttattttccggtaaacacctttaatagaccatt 76  Q
    ||||| ||||||||||||||||||| |||||||||||||||||||||||| | ||||| || |||||| |||||    
T  22981042 cctataaaattttcggtttgatttgtaccctcgtaaaatttttattttccagaaaacatctctaataggccatt 22980969  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 1 - 53
Target Start/End: Original strand, 17159161 - 17159213
Alignment:
Q  1 cccctattaaattttcggtttgatttgcaccctcgtaaaatttttattttccg 53  Q
    ||||||| |||||||||||||||||||||||||||||||| ||||||||||||    
T  17159161 cccctataaaattttcggtttgatttgcaccctcgtaaaaattttattttccg 17159213  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 1 - 81
Target Start/End: Complemental strand, 23382908 - 23382828
Alignment:
Q  1 cccctattaaattttcggtttgatttgcaccctcgtaaaatttttattttccggtaaacacctttaatagaccattcaaaa 81  Q
    ||||||| || ||||||||||||||| ||||||||||||| |||||||||  || ||||||| ||||||| ||||||||||    
T  23382908 cccctataaacttttcggtttgattttcaccctcgtaaaaattttattttttggaaaacacccttaataggccattcaaaa 23382828  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 1 - 53
Target Start/End: Complemental strand, 23943216 - 23943164
Alignment:
Q  1 cccctattaaattttcggtttgatttgcaccctcgtaaaatttttattttccg 53  Q
    ||||||| |||||||||||||||||||||||||||||||| ||||||||||||    
T  23943216 cccctataaaattttcggtttgatttgcaccctcgtaaaaattttattttccg 23943164  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #42
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 9 - 76
Target Start/End: Complemental strand, 18609496 - 18609429
Alignment:
Q  9 aaattttcggtttgatttgcaccctcgtaaaatttttattttccggtaaacacctttaatagaccatt 76  Q
    ||||||||||||||||||||||||||||||||  |||||||||||| |||||||  |||||| |||||    
T  18609496 aaattttcggtttgatttgcaccctcgtaaaaaatttattttccggaaaacacccctaataggccatt 18609429  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #43
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 11 - 76
Target Start/End: Complemental strand, 116843 - 116778
Alignment:
Q  11 attttcggtttgatttgcaccctcgtaaaatttttattttccggtaaacacctttaatagaccatt 76  Q
    ||||| |||||||||||||||||||||||||||||||||||| | |||||||  |||||| |||||    
T  116843 atttttggtttgatttgcaccctcgtaaaatttttattttccagaaaacacccctaataggccatt 116778  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #44
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 1 - 62
Target Start/End: Complemental strand, 17750090 - 17750029
Alignment:
Q  1 cccctattaaattttcggtttgatttgcaccctcgtaaaatttttattttccggtaaacacc 62  Q
    ||||||| |||||||||||||||||||||||| ||||||||| || |||||||| |||||||    
T  17750090 cccctataaaattttcggtttgatttgcacccacgtaaaattatttttttccggaaaacacc 17750029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #45
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 1 - 62
Target Start/End: Complemental strand, 17759077 - 17759016
Alignment:
Q  1 cccctattaaattttcggtttgatttgcaccctcgtaaaatttttattttccggtaaacacc 62  Q
    ||||||| |||||||||||||||||||||||| ||||||||| || |||||||| |||||||    
T  17759077 cccctataaaattttcggtttgatttgcacccacgtaaaattatttttttccggaaaacacc 17759016  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #46
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 1 - 76
Target Start/End: Complemental strand, 7595465 - 7595390
Alignment:
Q  1 cccctattaaattttcggtttgatttgcaccctcgtaaaatttttattttccggtaaacacctttaatagaccatt 76  Q
    ||||||| |||||||| ||||||||||||||||| ||||| ||||||||| ||| |||||||  |||||| |||||    
T  7595465 cccctataaaattttcagtttgatttgcaccctcataaaaattttatttttcggaaaacacccctaataggccatt 7595390  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #47
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 1 - 76
Target Start/End: Complemental strand, 21590074 - 21589999
Alignment:
Q  1 cccctattaaattttcggtttgatttgcaccctcgtaaaatttttattttccggtaaacacctttaatagaccatt 76  Q
    ||||||| ||||||||||||||||  ||||| |||||||| ||||||||||||| |||||||  |||||| |||||    
T  21590074 cccctataaaattttcggtttgataggcaccgtcgtaaaaattttattttccggaaaacacccctaataggccatt 21589999  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #48
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 2 - 62
Target Start/End: Complemental strand, 31957544 - 31957483
Alignment:
Q  2 ccctattaaattttcggtttgatttgcacc-ctcgtaaaatttttattttccggtaaacacc 62  Q
    |||||| ||||||||| ||||||||||||| ||||||||| ||||||||||||| |||||||    
T  31957544 ccctataaaattttcgctttgatttgcaccactcgtaaaaattttattttccggaaaacacc 31957483  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #49
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 4 - 52
Target Start/End: Original strand, 11296552 - 11296600
Alignment:
Q  4 ctattaaattttcggtttgatttgcaccctcgtaaaatttttattttcc 52  Q
    |||| |||||||| |||||||||||||| ||||||||||||||||||||    
T  11296552 ctataaaattttctgtttgatttgcaccttcgtaaaatttttattttcc 11296600  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #50
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 2 - 70
Target Start/End: Original strand, 12610742 - 12610810
Alignment:
Q  2 ccctattaaattttcggtttgatttgcaccctcgtaaaatttttattttccggtaaacacctttaatag 70  Q
    |||||| |||||||||||||||||||   ||| |||||||||| ||||||||| ||||||| |||||||    
T  12610742 ccctataaaattttcggtttgatttgtgtccttgtaaaattttcattttccggaaaacacccttaatag 12610810  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #51
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 1 - 81
Target Start/End: Complemental strand, 21127563 - 21127483
Alignment:
Q  1 cccctattaaattttcggtttgatttgcaccctcgtaaaatttttattttccggtaaacacctttaatagaccattcaaaa 81  Q
    ||||||| |||||||| ||||||||| |||||||||||||   ||||||| | | ||||||| ||||||| ||||||||||    
T  21127563 cccctataaaattttcagtttgatttacaccctcgtaaaaaaattatttttcagaaaacacccttaataggccattcaaaa 21127483  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #52
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 1 - 96
Target Start/End: Original strand, 22980860 - 22980955
Alignment:
Q  1 cccctattaaattttcggtttgatttgcaccctcgtaaaatttttattttccggtaaacacctttaatagaccattc-aaaaccaaaattttttgaa 96  Q
    ||||||| ||||||| |||||||||||||| || ||||||   ||||||| ||| ||||||| ||||||| |||||| ||||||||||||| |||||    
T  22980860 cccctataaaatttttggtttgatttgcactcttgtaaaa-aattatttttcggaaaacacccttaataggccattcaaaaaccaaaatttcttgaa 22980955  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #53
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 1 - 96
Target Start/End: Original strand, 34618020 - 34618115
Alignment:
Q  1 cccctattaaattttcggtttgatttgcaccctcgtaaaatttttattttccggtaaacacctttaatagaccattc-aaaaccaaaattttttgaa 96  Q
    ||||||| ||||||||||||||||||||| | |||| || ||||| || | ||| ||||||| ||||||| |||||| ||||||||||||| |||||    
T  34618020 cccctataaaattttcggtttgatttgcatcttcgt-aatttttttttcttcggaaaacacccttaataggccattcaaaaaccaaaatttcttgaa 34618115  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #54
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 12 - 76
Target Start/End: Complemental strand, 34618193 - 34618129
Alignment:
Q  12 ttttcggtttgatttgcaccctcgtaaaatttttattttccggtaaacacctttaatagaccatt 76  Q
    ||||||||||||||||   |||||||||||||||||||| ||| ||||||| ||||||| |||||    
T  34618193 ttttcggtttgatttgtgtcctcgtaaaatttttatttttcggaaaacacccttaataggccatt 34618129  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #55
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 1 - 40
Target Start/End: Original strand, 23352050 - 23352089
Alignment:
Q  1 cccctattaaattttcggtttgatttgcaccctcgtaaaa 40  Q
    ||||||| ||||||||||||||||||||||||||||||||    
T  23352050 cccctataaaattttcggtttgatttgcaccctcgtaaaa 23352089  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #56
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 1 - 40
Target Start/End: Complemental strand, 37597933 - 37597894
Alignment:
Q  1 cccctattaaattttcggtttgatttgcaccctcgtaaaa 40  Q
    ||||||| ||||||||||||||||||||||||||||||||    
T  37597933 cccctataaaattttcggtttgatttgcaccctcgtaaaa 37597894  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #57
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 1 - 76
Target Start/End: Original strand, 42933097 - 42933172
Alignment:
Q  1 cccctattaaattttcggtttgatttgcaccctcgtaaaatttttattttccggtaaacacctttaatagaccatt 76  Q
    ||||||| ||||||| ||||||||||||||| || ||||| ||||||||||| | |||||||  |||||| |||||    
T  42933097 cccctataaaatttttggtttgatttgcaccttcttaaaaattttattttccagaaaacacccctaataggccatt 42933172  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #58
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 1 - 39
Target Start/End: Complemental strand, 7910361 - 7910323
Alignment:
Q  1 cccctattaaattttcggtttgatttgcaccctcgtaaa 39  Q
    ||||||| |||||||||||||||||||||||||||||||    
T  7910361 cccctataaaattttcggtttgatttgcaccctcgtaaa 7910323  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #59
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 4 - 70
Target Start/End: Complemental strand, 40628406 - 40628340
Alignment:
Q  4 ctattaaattttcggtttgatttgcaccctcgtaaaatttttattttccggtaaacacctttaatag 70  Q
    |||| |||||||||||||||||||||||||||||||  | || |||||||| ||||| | |||||||    
T  40628406 ctataaaattttcggtttgatttgcaccctcgtaaatatatttttttccggaaaacaaccttaatag 40628340  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #60
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 1 - 62
Target Start/End: Original strand, 17713500 - 17713561
Alignment:
Q  1 cccctattaaattttcggtttgatttgcaccctcgtaaaatttttattttccggtaaacacc 62  Q
    ||||||| ||||||||||||||||||||| ||| ||||||  ||| |||||||| |||||||    
T  17713500 cccctataaaattttcggtttgatttgcatccttgtaaaacattttttttccggaaaacacc 17713561  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #61
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 9 - 62
Target Start/End: Original strand, 29841983 - 29842036
Alignment:
Q  9 aaattttcggtttgatttgcaccctcgtaaaatttttattttccggtaaacacc 62  Q
    ||||||||||||||||||||| ||| |||||| ||||||||||||  |||||||    
T  29841983 aaattttcggtttgatttgcatccttgtaaaacttttattttccgaaaaacacc 29842036  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #62
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 62
Target Start/End: Original strand, 11966088 - 11966151
Alignment:
Q  1 cccctattaaattttcggtttgatttgcaccctcgtaaaa--tttttattttccggtaaacacc 62  Q
    ||||||| ||||||||||||||||||||| ||| ||||||  ||||| |||||||| |||||||    
T  11966088 cccctataaaattttcggtttgatttgcatcctagtaaaactttttttttttccggaaaacacc 11966151  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #63
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 4 - 76
Target Start/End: Complemental strand, 18845274 - 18845203
Alignment:
Q  4 ctattaaattttcggtttgatttgcaccctcgtaaaatttttattttccggtaaacacctttaatagaccatt 76  Q
    |||| ||||||| | ||||||||||| ||||||||| |||||||||||||| ||||| || |||||| |||||    
T  18845274 ctataaaatttttgatttgatttgcatcctcgtaaa-tttttattttccggaaaacatctctaataggccatt 18845203  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #64
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 29 - 76
Target Start/End: Original strand, 36574482 - 36574529
Alignment:
Q  29 accctcgtaaaatttttattttccggtaaacacctttaatagaccatt 76  Q
    |||||||||||||||||||||||||| |||||||  |||||| |||||    
T  36574482 accctcgtaaaatttttattttccggaaaacacccataataggccatt 36574529  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #65
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 4 - 43
Target Start/End: Original strand, 37715187 - 37715226
Alignment:
Q  4 ctattaaattttcggtttgatttgcaccctcgtaaaattt 43  Q
    |||| ||||||||||||||||| |||||||||||||||||    
T  37715187 ctataaaattttcggtttgattcgcaccctcgtaaaattt 37715226  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #66
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 1 - 40
Target Start/End: Complemental strand, 39879828 - 39879789
Alignment:
Q  1 cccctattaaattttcggtttgatttgcaccctcgtaaaa 40  Q
    ||||||| |||||||||| |||||||||||||||||||||    
T  39879828 cccctataaaattttcggcttgatttgcaccctcgtaaaa 39879789  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #67
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 9 - 62
Target Start/End: Original strand, 3260930 - 3260983
Alignment:
Q  9 aaattttcggtttgatttgcaccctcgtaaaatttttattttccggtaaacacc 62  Q
    ||||||||||||||||||||| ||| |||||| |||| |||| ||| |||||||    
T  3260930 aaattttcggtttgatttgcatccttgtaaaacttttttttttcggaaaacacc 3260983  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #68
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 3 - 40
Target Start/End: Complemental strand, 8814957 - 8814920
Alignment:
Q  3 cctattaaattttcggtttgatttgcaccctcgtaaaa 40  Q
    ||||| ||||||||||||||||||||| ||||||||||    
T  8814957 cctataaaattttcggtttgatttgcatcctcgtaaaa 8814920  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #69
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 11 - 40
Target Start/End: Original strand, 9500816 - 9500845
Alignment:
Q  11 attttcggtttgatttgcaccctcgtaaaa 40  Q
    ||||||||||||||||||||||||||||||    
T  9500816 attttcggtttgatttgcaccctcgtaaaa 9500845  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #70
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 50
Target Start/End: Original strand, 13198143 - 13198192
Alignment:
Q  1 cccctattaaattttcggtttgatttgcaccctcgtaaaatttttatttt 50  Q
    ||||||| ||||||||||||||||||||| ||| |||||| |||| ||||    
T  13198143 cccctataaaattttcggtttgatttgcatccttgtaaaacttttttttt 13198192  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #71
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 9 - 62
Target Start/End: Original strand, 19391692 - 19391745
Alignment:
Q  9 aaattttcggtttgatttgcaccctcgtaaaatttttattttccggtaaacacc 62  Q
    ||||||||||||||||||||| ||| |||||| |||| |||||| | |||||||    
T  19391692 aaattttcggtttgatttgcatccttgtaaaactttttttttccagaaaacacc 19391745  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #72
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 1 - 41
Target Start/End: Complemental strand, 6163158 - 6163118
Alignment:
Q  1 cccctattaaattttcggtttgatttgcaccctcgtaaaat 41  Q
    ||||||| ||||||||||||||||||||| ||| |||||||    
T  6163158 cccctataaaattttcggtttgatttgcatccttgtaaaat 6163118  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #73
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 2 - 62
Target Start/End: Complemental strand, 12318718 - 12318658
Alignment:
Q  2 ccctattaaattttcggtttgatttgcaccctcgtaaaatttttattttccggtaaacacc 62  Q
    |||||| ||||||||||||||| ||||| ||| |||||| |||| |||||| | |||||||    
T  12318718 ccctataaaattttcggtttgaattgcatccttgtaaaactttttttttccagaaaacacc 12318658  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #74
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 2 - 54
Target Start/End: Complemental strand, 13201901 - 13201849
Alignment:
Q  2 ccctattaaattttcggtttgatttgcaccctcgtaaaatttttattttccgg 54  Q
    |||||| ||||||||||||||||||||| ||| |||||| |||| || |||||    
T  13201901 ccctataaaattttcggtttgatttgcatccttgtaaaagtttttttctccgg 13201849  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #75
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 4 - 76
Target Start/End: Original strand, 31951240 - 31951312
Alignment:
Q  4 ctattaaattttcggtttgatttgcaccctcgtaaaatttttattttccggtaaacacctttaatagaccatt 76  Q
    |||| |||| ||| |||||||||||||||||||||| | ||| |||||||  |||||||  |||||| |||||    
T  31951240 ctataaaatattcagtttgatttgcaccctcgtaaattattttttttccgaaaaacacccctaataggccatt 31951312  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #76
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 2 - 38
Target Start/End: Complemental strand, 41007742 - 41007706
Alignment:
Q  2 ccctattaaattttcggtttgatttgcaccctcgtaa 38  Q
    |||||| ||||||||||||||||||||||| ||||||    
T  41007742 ccctataaaattttcggtttgatttgcaccttcgtaa 41007706  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 72; Significance: 1e-32; HSPs: 87)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 1 - 128
Target Start/End: Original strand, 6143365 - 6143501
Alignment:
Q  1 cccctattaaattttcggtttgatttgcaccctcgtaaaatttttattttccggtaaacacctttaatagaccattc-aaaaccaaaattttttgaa--- 96  Q
    ||||||| |||||||||||||||||||||||||||||||||||||||||||||| | ||||| ||||||| |||||| |||||||||||||||||||       
T  6143365 cccctataaaattttcggtttgatttgcaccctcgtaaaatttttattttccggaagacacccttaataggccattcaaaaaccaaaattttttgaaaaa 6143464  T
Q  97 -----ctgaaaatgacctattaggggtgtttttcgga 128  Q
         ||||||||| ||||||||||||||||| ||||    
T  6143465 aaattctgaaaatggcctattaggggtgttttccgga 6143501  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 69; E-Value: 6e-31
Query Start/End: Original strand, 1 - 96
Target Start/End: Original strand, 39886563 - 39886659
Alignment:
Q  1 cccctattaaattttcggtttgatttgcaccctcgtaaaatttttattttccggtaaacacctttaatagaccattc-aaaaccaaaattttttgaa 96  Q
    ||||||| |||||||||||||||||||||||||||||||||||||||||||||| ||||||| ||||||| |||||| ||||||||||||| |||||    
T  39886563 cccctataaaattttcggtttgatttgcaccctcgtaaaatttttattttccggaaaacacccttaataggccattcaaaaaccaaaatttcttgaa 39886659  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 2 - 128
Target Start/End: Complemental strand, 18805397 - 18805262
Alignment:
Q  2 ccctattaaattttcggtttgatttgcaccctcgtaaaatttttattttccggtaaacacctttaatagaccattc-aaaaccaaaattttttgaa---- 96  Q
    |||||| |||||||||||||||||||||||||||||||||||||||||||| | ||||||| ||||||| |||||| ||||||||| |||||||||        
T  18805397 ccctataaaattttcggtttgatttgcaccctcgtaaaatttttattttccagaaaacacccttaataggccattcaaaaaccaaatttttttgaaaaaa 18805298  T
Q  97 ----ctgaaaatgacctattaggggtgtttttcgga 128  Q
        ||||||||| ||||||||||||||||| ||||    
T  18805297 aattctgaaaatggcctattaggggtgttttccgga 18805262  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 1 - 96
Target Start/End: Original strand, 27451346 - 27451442
Alignment:
Q  1 cccctattaaattttcggtttgatttgcaccctcgtaaaatttttattttccggtaaacacctttaatagaccattc-aaaaccaaaattttttgaa 96  Q
    ||||||| |||||||||||||||||| ||||||||||||||||||||||||||| ||||||| ||||||| |||||| ||||||||||||| |||||    
T  27451346 cccctataaaattttcggtttgattttcaccctcgtaaaatttttattttccggaaaacacccttaataggccattcaaaaaccaaaatttcttgaa 27451442  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 1 - 96
Target Start/End: Original strand, 27830005 - 27830101
Alignment:
Q  1 cccctattaaattttcggtttgatttgcaccctcgtaaaatttttattttccggtaaacacctttaatagaccattc-aaaaccaaaattttttgaa 96  Q
    ||||||| |||||||||||||||||||||||||||||||||||||||||||||  ||||||| ||||||| |||||| ||||||||||||| |||||    
T  27830005 cccctataaaattttcggtttgatttgcaccctcgtaaaatttttattttccgaaaaacacccttaataggccattcaaaaaccaaaatttcttgaa 27830101  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 64; E-Value: 6e-28
Query Start/End: Original strand, 9 - 128
Target Start/End: Complemental strand, 20352860 - 20352732
Alignment:
Q  9 aaattttcggtttgatttgcaccctcgtaaaatttttattttccggtaaacacctttaatagaccattc-aaaaccaaaattttttgaa--------ctg 99  Q
    |||||||||||||||||||||||||||||||||||||||||||| | ||||||| ||||||| |||||| ||||||||||||| |||||        |||    
T  20352860 aaattttcggtttgatttgcaccctcgtaaaatttttattttccagaaaacacccttaataggccattcaaaaaccaaaatttcttgaaaaaaaattctg 20352761  T
Q  100 aaaatgacctattaggggtgtttttcgga 128  Q
    |||||| ||||||||||||||||| ||||    
T  20352760 aaaatggcctattaggggtgttttccgga 20352732  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 64; E-Value: 6e-28
Query Start/End: Original strand, 1 - 128
Target Start/End: Complemental strand, 40616432 - 40616298
Alignment:
Q  1 cccctattaaattttcggtttgatttgcaccctcgtaaaatttttattttccggtaaacacctttaatagaccattc-aaaaccaaaattttttgaa--- 96  Q
    ||||||| |||||||||||||||||||||||||||||||||||||||||||||  ||||||| |||||||  ||||| ||||||||||||| |||||       
T  40616432 cccctataaaattttcggtttgatttgcaccctcgtaaaatttttattttccgaaaaacacccttaataggtcattcaaaaaccaaaatttcttgaaaaa 40616333  T
Q  97 ---ctgaaaatgacctattaggggtgtttttcgga 128  Q
       ||||||||| |||||||| |||||||| ||||    
T  40616332 attctgaaaatggcctattagaggtgttttccgga 40616298  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 1 - 123
Target Start/End: Original strand, 16867810 - 16867941
Alignment:
Q  1 cccctattaaattttcggtttgatttgcaccctcgtaaaatttttattttccggtaaacacctttaatagaccattc-aaaaccaaaattttttgaa--- 96  Q
    ||||||| |||||||||||||||||||||| |||||||| |||||||||||||| ||| ||| ||||||| |||||| ||||||||||||| |||||       
T  16867810 cccctataaaattttcggtttgatttgcactctcgtaaattttttattttccggaaaatacccttaataggccattcaaaaaccaaaatttcttgaaaaa 16867909  T
Q  97 -----ctgaaaatgacctattaggggtgtttt 123  Q
         |||||||||||||||||||||||||||    
T  16867910 aaattctgaaaatgacctattaggggtgtttt 16867941  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 2 - 128
Target Start/End: Original strand, 21000405 - 21000540
Alignment:
Q  2 ccctattaaattttcggtttgatttgcaccctcgtaaaatttttattttccggtaaacacctttaatagaccattc-aaaaccaaaattttttgaa---- 96  Q
    |||||| |||||||||||||||||| ||||||||||||||||||||||||||| ||||| | ||||||| |||||| ||||||||||||| |||||        
T  21000405 ccctataaaattttcggtttgattttcaccctcgtaaaatttttattttccggaaaacatccttaataggccattcaaaaaccaaaatttcttgaaaaaa 21000504  T
Q  97 ----ctgaaaatgacctattaggggtgtttttcgga 128  Q
        ||||||||  ||||||||||||||||||||||    
T  21000505 aattctgaaaattgcctattaggggtgtttttcgga 21000540  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 4 - 123
Target Start/End: Original strand, 26404934 - 26405061
Alignment:
Q  4 ctattaaattttcggtttgatttgcaccctcgtaaaatttttattttccggtaaacacctttaatagaccattc-aaaaccaaaattttttga------- 95  Q
    |||| |||||||||||||||||||||||||||||| ||||||||||||||| ||||||| ||||||| |||||| ||||||||||||| ||||           
T  26404934 ctataaaattttcggtttgatttgcaccctcgtaacatttttattttccggaaaacacccttaataggccattcaaaaaccaaaatttcttgacaaaaat 26405033  T
Q  96 actgaaaatgacctattaggggtgtttt 123  Q
     ||||||||| |||||||||||||||||    
T  26405034 tctgaaaatggcctattaggggtgtttt 26405061  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 1 - 96
Target Start/End: Complemental strand, 7885014 - 7884918
Alignment:
Q  1 cccctattaaattttcggtttgatttgcaccctcgtaaaatttttattttccggtaaacacctttaatagaccattc-aaaaccaaaattttttgaa 96  Q
    ||||||| ||||||||||||||||||||||||||||||||  |||||||||||| ||||||| ||||||| |||||| ||||||||||||| |||||    
T  7885014 cccctataaaattttcggtttgatttgcaccctcgtaaaaaatttattttccggaaaacacccttaataggccattcaaaaaccaaaatttcttgaa 7884918  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 1 - 96
Target Start/End: Complemental strand, 8406153 - 8406057
Alignment:
Q  1 cccctattaaattttcggtttgatttgcaccctcgtaaaatttttattttccggtaaacacctttaatagaccattc-aaaaccaaaattttttgaa 96  Q
    ||||||| |||||||||||||||||| ||||||||||||||||||||||||| | ||||||| ||||||| |||||| ||||||||||||| |||||    
T  8406153 cccctataaaattttcggtttgattttcaccctcgtaaaatttttattttccagaaaacacccttaataggccattcaaaaaccaaaatttcttgaa 8406057  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 1 - 96
Target Start/End: Original strand, 12369514 - 12369610
Alignment:
Q  1 cccctattaaattttcggtttgatttgcaccctcgtaaaatttttattttccggtaaacacctttaatagaccattc-aaaaccaaaattttttgaa 96  Q
    ||||||| |||||||||||||||||||||||||||||||||||| ||||||| | ||||||| ||||||| |||||| ||||||||||||| |||||    
T  12369514 cccctataaaattttcggtttgatttgcaccctcgtaaaattttgattttccagaaaacacccttaataggccattcaaaaaccaaaatttcttgaa 12369610  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 1 - 96
Target Start/End: Original strand, 13892615 - 13892711
Alignment:
Q  1 cccctattaaattttcggtttgatttgcaccctcgtaaaatttttattttccggtaaacacctttaatagaccattc-aaaaccaaaattttttgaa 96  Q
    ||||||| |||||||||||||||||||||||||| ||||| ||||||||||||| ||||||| ||||||| |||||| ||||||||||||| |||||    
T  13892615 cccctataaaattttcggtttgatttgcaccctcataaaaattttattttccggaaaacacccttaataggccattcaaaaaccaaaatttcttgaa 13892711  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 1 - 96
Target Start/End: Original strand, 22634167 - 22634263
Alignment:
Q  1 cccctattaaattttcggtttgatttgcaccctcgtaaaatttttattttccggtaaacacctttaatagaccattc-aaaaccaaaattttttgaa 96  Q
    ||||||| |||||||||||||||||| ||||||||||||||||||||||| ||| |||||| |||||||| |||||| ||||||||||||| |||||    
T  22634167 cccctataaaattttcggtttgattttcaccctcgtaaaatttttatttttcggaaaacacttttaataggccattcaaaaaccaaaatttcttgaa 22634263  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 59; E-Value: 6e-25
Query Start/End: Original strand, 275 - 341
Target Start/End: Complemental strand, 17660174 - 17660108
Alignment:
Q  275 atggcgcaaaagcatatatggtccggtattcccttgttccctgtattggttatgttcttcatctctc 341  Q
    |||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||| ||||    
T  17660174 atggcgcaaaagcagatatggtccggtattcccttgttccctgtattggttatgttcttcatttctc 17660108  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 57; E-Value: 9e-24
Query Start/End: Original strand, 1 - 96
Target Start/End: Original strand, 38678229 - 38678325
Alignment:
Q  1 cccctattaaattttcggtttgatttgcaccctcgtaaaatttttattttccggtaaacacctttaatagaccattc-aaaaccaaaattttttgaa 96  Q
    ||||||| ||||||| |||||||||| ||||||||||||| ||||||||||||| ||||||| ||||||| |||||| ||||||||||||| |||||    
T  38678229 cccctataaaatttttggtttgattttcaccctcgtaaaaattttattttccggaaaacacccttaataggccattcaaaaaccaaaatttcttgaa 38678325  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 1 - 76
Target Start/End: Complemental strand, 5081710 - 5081635
Alignment:
Q  1 cccctattaaattttcggtttgatttgcaccctcgtaaaatttttattttccggtaaacacctttaatagaccatt 76  Q
    ||||||| |||||||||||||||||||||||||||||||||||||||||||||| |||||||  |||||| |||||    
T  5081710 cccctataaaattttcggtttgatttgcaccctcgtaaaatttttattttccggaaaacacccctaataggccatt 5081635  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 1 - 76
Target Start/End: Original strand, 10690844 - 10690919
Alignment:
Q  1 cccctattaaattttcggtttgatttgcaccctcgtaaaatttttattttccggtaaacacctttaatagaccatt 76  Q
    ||||||| |||||||||||||||||||||||||||||||||||||||||||||| |||||||  |||||| |||||    
T  10690844 cccctataaaattttcggtttgatttgcaccctcgtaaaatttttattttccggaaaacacccctaataggccatt 10690919  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 1 - 76
Target Start/End: Complemental strand, 12369699 - 12369624
Alignment:
Q  1 cccctattaaattttcggtttgatttgcaccctcgtaaaatttttattttccggtaaacacctttaatagaccatt 76  Q
    ||||||| |||||||||||||||||||||||||||||||||||||||||||||| |||||||  |||||| |||||    
T  12369699 cccctataaaattttcggtttgatttgcaccctcgtaaaatttttattttccggaaaacacccctaataggccatt 12369624  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 2 - 128
Target Start/End: Original strand, 5081526 - 5081661
Alignment:
Q  2 ccctattaaattttcggtttgatttgcaccctcgtaaaatttttattttccggtaaacacctttaatagaccattc-aaaaccaaaattttttgaa---- 96  Q
    |||||| |||||||||||||||||| |||||||||||||  |||||||||||| ||||| | ||||||| |||||| ||||||||||||| |||||        
T  5081526 ccctataaaattttcggtttgattttcaccctcgtaaaaaatttattttccggaaaacatccttaataggccattcaaaaaccaaaatttcttgaaaaaa 5081625  T
Q  97 ----ctgaaaatgacctattaggggtgtttttcgga 128  Q
        ||||||||| ||||||||||||||||| ||||    
T  5081626 aattctgaaaatggcctattaggggtgttttccgga 5081661  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 4 - 128
Target Start/End: Complemental strand, 10691025 - 10690893
Alignment:
Q  4 ctattaaattttcggtttgatttgcaccctcgtaaaatttttattttccggtaaacacctttaatagaccattc-aaaaccaaaattttttgaa------ 96  Q
    |||| |||||||| |||||||||||||||||||||||  |||||||||| | ||||||| ||||||| |||||| ||||||||||||| |||||          
T  10691025 ctataaaattttcagtttgatttgcaccctcgtaaaaaatttattttccagaaaacacccttaataggccattcaaaaaccaaaatttcttgaaaaaaaa 10690926  T
Q  97 -ctgaaaatgacctattaggggtgtttttcgga 128  Q
     ||||||||| ||||||||||||||||| ||||    
T  10690925 tctgaaaatggcctattaggggtgttttccgga 10690893  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 9 - 128
Target Start/End: Original strand, 5105158 - 5105285
Alignment:
Q  9 aaattttcggtttgatttgcaccctcgtaaaatttttattttccggtaaacacctttaatagaccattc-aaaaccaaaattttttgaa-------ctga 100  Q
    |||||||| |||||||||||||||| |||||||||||||||| ||| ||||| | ||||||| |||||| ||||||||||||| |||||       || |    
T  5105158 aaattttcagtttgatttgcacccttgtaaaatttttatttttcggaaaacatccttaataggccattcaaaaaccaaaatttcttgaaaaaaattctaa 5105257  T
Q  101 aaatgacctattaggggtgtttttcgga 128  Q
    |||||| |||||||||||||||||||||    
T  5105258 aaatgatctattaggggtgtttttcgga 5105285  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 2 - 90
Target Start/End: Complemental strand, 30126680 - 30126591
Alignment:
Q  2 ccctattaaattttcggtttgatttgcaccctcgtaaaatttttattttccggtaaacacctttaatagaccattc-aaaaccaaaattt 90  Q
    |||||| |||||||||||||||||||||||||||||||||||||||||| ||| ||||| | ||||||  |||||| |||||||||||||    
T  30126680 ccctataaaattttcggtttgatttgcaccctcgtaaaatttttatttttcggaaaacatccttaataagccattcaaaaaccaaaattt 30126591  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 4 - 128
Target Start/End: Original strand, 21262657 - 21262790
Alignment:
Q  4 ctattaaattttcggtttgatttgcaccctcgtaaaatttttattttccggtaaacacctttaatagaccattc-aaaaccaaaattttttgaa------ 96  Q
    |||| |||||||||||||||||||||||||| |||||  |||||||| ||| ||||||| ||||||| |||||| ||||||||||||| |||||          
T  21262657 ctataaaattttcggtttgatttgcaccctcttaaaaaatttatttttcggaaaacacccttaataggccattcaaaaaccaaaatttcttgaaaaaaaa 21262756  T
Q  97 --ctgaaaatgacctattaggggtgtttttcgga 128  Q
      ||||||||| ||||||||||||||||| ||||    
T  21262757 ttctgaaaatgccctattaggggtgttttccgga 21262790  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 1 - 96
Target Start/End: Original strand, 26006563 - 26006659
Alignment:
Q  1 cccctattaaattttcggtttgatttgcaccctcgtaaaatttttattttccggtaaacacctttaatagaccattc-aaaaccaaaattttttgaa 96  Q
    ||||||| ||||||||||||||||||||||||||||||||  |||||||| ||  ||||||| ||||||| |||||| ||||||||||||| |||||    
T  26006563 cccctataaaattttcggtttgatttgcaccctcgtaaaaaatttatttttcgaaaaacacccttaataggccattcaaaaaccaaaatttcttgaa 26006659  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 1 - 128
Target Start/End: Complemental strand, 11762483 - 11762347
Alignment:
Q  1 cccctattaaattttcggtttgatttgcaccctcgtaaaatttttattttccggtaaacacctttaatagaccattc-aaaaccaaaattttttgaa--- 96  Q
    ||||||| ||||||||||||||||||||||||||||||||   ||||||| ||| ||||||  ||||||| |||||| ||||||||||||| |||||       
T  11762483 cccctataaaattttcggtttgatttgcaccctcgtaaaaaaattatttttcggaaaacactcttaataggccattcaaaaaccaaaatttcttgaaatt 11762384  T
Q  97 -----ctgaaaatgacctattaggggtgtttttcgga 128  Q
         ||||||||| ||||||||||||||||| ||||    
T  11762383 tttttctgaaaatggcctattaggggtgttttccgga 11762347  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 1 - 128
Target Start/End: Original strand, 13952508 - 13952644
Alignment:
Q  1 cccctattaaattttcggtttgatttgcaccctcgtaaaatttttattttccggtaaacacctttaatagaccattc-aaaaccaaaattttttgaa--- 96  Q
    ||||||| ||||||||||||||| || |||||||||||||||||| |||| ||  ||||||| ||||||| |||||| ||||||||||||| |||||       
T  13952508 cccctataaaattttcggtttgaatttcaccctcgtaaaatttttttttttcgaaaaacacccttaataggccattcaaaaaccaaaatttcttgaaaaa 13952607  T
Q  97 -----ctgaaaatgacctattaggggtgtttttcgga 128  Q
         ||||||||| ||||||||||||||||| ||||    
T  13952608 aaattctgaaaatggcctattaggggtgttttccgga 13952644  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 1 - 76
Target Start/End: Complemental strand, 20884269 - 20884194
Alignment:
Q  1 cccctattaaattttcggtttgatttgcaccctcgtaaaatttttattttccggtaaacacctttaatagaccatt 76  Q
    ||||||| ||||||||||||||||||||||||||||||||| |||||||||||| |||||||  |||||| |||||    
T  20884269 cccctataaaattttcggtttgatttgcaccctcgtaaaatgtttattttccggaaaacacccctaataggccatt 20884194  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 1 - 76
Target Start/End: Original strand, 37064395 - 37064470
Alignment:
Q  1 cccctattaaattttcggtttgatttgcaccctcgtaaaatttttattttccggtaaacacctttaatagaccatt 76  Q
    ||||||| |||||||||||||||||||||||||||||||| ||||||||||||| |||||||  |||||| |||||    
T  37064395 cccctataaaattttcggtttgatttgcaccctcgtaaaaattttattttccggaaaacacccataataggccatt 37064470  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 3 - 96
Target Start/End: Complemental strand, 6802308 - 6802214
Alignment:
Q  3 cctattaaattttcggtttgatttgcaccctcgtaaaatttttattttccggtaaacacctttaatagaccattc-aaaaccaaaattttttgaa 96  Q
    ||||| |||||||||||||||||||||||||| ||||||||||||||| |   ||||||| ||||||| |||||| ||||||||||||| |||||    
T  6802308 cctataaaattttcggtttgatttgcaccctcataaaatttttatttttcaaaaaacacccttaataggccattcaaaaaccaaaatttcttgaa 6802214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 1 - 87
Target Start/End: Original strand, 14946454 - 14946540
Alignment:
Q  1 cccctattaaattttcggtttgatttgcaccctcgtaaaatttttattttccggtaaacacctttaatagaccattcaaaaccaaaa 87  Q
    ||||||| |||||||| ||||||||| |||||||||||||||||||||||||   ||||||| ||||||| |||||||||| |||||    
T  14946454 cccctataaaattttcagtttgattttcaccctcgtaaaatttttattttccaaaaaacacccttaataggccattcaaaaacaaaa 14946540  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 2 - 76
Target Start/End: Original strand, 18618309 - 18618383
Alignment:
Q  2 ccctattaaattttcggtttgatttgcaccctcgtaaaatttttattttccggtaaacacctttaatagaccatt 76  Q
    |||||| ||||||| |||||||||||||||||||||||||||||||||||||| |||||||  |||||| |||||    
T  18618309 ccctataaaatttttggtttgatttgcaccctcgtaaaatttttattttccggaaaacacccctaataggccatt 18618383  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 9 - 62
Target Start/End: Complemental strand, 21262831 - 21262778
Alignment:
Q  9 aaattttcggtttgatttgcaccctcgtaaaatttttattttccggtaaacacc 62  Q
    |||||||||||||||||||||||||||||||||||||||||||||| |||||||    
T  21262831 aaattttcggtttgatttgcaccctcgtaaaatttttattttccggaaaacacc 21262778  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 8 - 96
Target Start/End: Original strand, 23294564 - 23294653
Alignment:
Q  8 taaattttcggtttgatttgcaccctcgtaaaatttttattttccggtaaacacctttaatagaccattc-aaaaccaaaattttttgaa 96  Q
    ||||||||| | |||||||| |||||||||||||||||||||||||| ||||||  ||||||| |||||| ||||||||||||| |||||    
T  23294564 taaattttcaggttgatttgtaccctcgtaaaatttttattttccggaaaacactcttaataggccattcaaaaaccaaaatttcttgaa 23294653  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 1 - 126
Target Start/End: Complemental strand, 29989700 - 29989565
Alignment:
Q  1 cccctattaaattttcggtttgatttgcaccctcgtaaaatttttattttccggtaaacacctttaatagaccattc-aaaaccaaaattttttgaa--- 96  Q
    ||||||| |||||||| ||||||||| ||||||||||||||||||||||||||  ||||| | ||||||| |||||| ||||||||||||| |||||       
T  29989700 cccctatcaaattttcagtttgattt-caccctcgtaaaatttttattttccgaaaaacaaccttaataggccattcaaaaaccaaaatttcttgaaaaa 29989602  T
Q  97 -------ctgaaaatgacctattaggggtgtttttcg 126  Q
           ||||||||| ||||||||||||||||||||    
T  29989601 aaaaaatctgaaaatggcctattaggggtgtttttcg 29989565  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 4 - 60
Target Start/End: Complemental strand, 13892797 - 13892741
Alignment:
Q  4 ctattaaattttcggtttgatttgcaccctcgtaaaatttttattttccggtaaaca 60  Q
    |||| |||||||||||||||||||||||||||||||||||||||||||||| |||||    
T  13892797 ctataaaattttcggtttgatttgcaccctcgtaaaatttttattttccggaaaaca 13892741  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 1 - 76
Target Start/End: Complemental strand, 6143550 - 6143475
Alignment:
Q  1 cccctattaaattttcggtttgatttgcaccctcgtaaaatttttattttccggtaaacacctttaatagaccatt 76  Q
    ||||||| ||||||||||||||||||||||||||||||||  |||||||||||| |||||||  |||||| |||||    
T  6143550 cccctataaaattttcggtttgatttgcaccctcgtaaaaaatttattttccggaaaacacccctaataggccatt 6143475  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 9 - 76
Target Start/End: Original strand, 11762306 - 11762373
Alignment:
Q  9 aaattttcggtttgatttgcaccctcgtaaaatttttattttccggtaaacacctttaatagaccatt 76  Q
    |||||||||||||||||||||||||||||||||||| ||||||||| |||||||  |||||| |||||    
T  11762306 aaattttcggtttgatttgcaccctcgtaaaattttcattttccggaaaacacccctaataggccatt 11762373  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 1 - 76
Target Start/End: Complemental strand, 14946639 - 14946564
Alignment:
Q  1 cccctattaaattttcggtttgatttgcaccctcgtaaaatttttattttccggtaaacacctttaatagaccatt 76  Q
    ||||||| ||||||||||||||||||||||||||||||||||||||| |||| | |||||||  |||||| |||||    
T  14946639 cccctataaaattttcggtttgatttgcaccctcgtaaaatttttatattccagaaaacacccctaataggccatt 14946564  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #41
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 9 - 76
Target Start/End: Original strand, 20352691 - 20352758
Alignment:
Q  9 aaattttcggtttgatttgcaccctcgtaaaatttttattttccggtaaacacctttaatagaccatt 76  Q
    |||||||||||||||||| ||||||||||||||||||||||||||| |||||||  |||||| |||||    
T  20352691 aaattttcggtttgatttacaccctcgtaaaatttttattttccggaaaacacccctaataggccatt 20352758  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #42
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 1 - 76
Target Start/End: Complemental strand, 29690700 - 29690625
Alignment:
Q  1 cccctattaaattttcggtttgatttgcaccctcgtaaaatttttattttccggtaaacacctttaatagaccatt 76  Q
    ||||||| ||||||||||||||||||||||||| |||||| ||||||||||||| |||||||  |||||| |||||    
T  29690700 cccctataaaattttcggtttgatttgcacccttgtaaaaattttattttccggaaaacacccctaataggccatt 29690625  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #43
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 1 - 76
Target Start/End: Complemental strand, 39886748 - 39886673
Alignment:
Q  1 cccctattaaattttcggtttgatttgcaccctcgtaaaatttttattttccggtaaacacctttaatagaccatt 76  Q
    ||||||| |||||||||||||||||||||||||||||||| ||||||||||| | |||||||  |||||| |||||    
T  39886748 cccctataaaattttcggtttgatttgcaccctcgtaaaaattttattttccagaaaacaccactaataggccatt 39886673  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #44
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 2 - 76
Target Start/End: Complemental strand, 13952692 - 13952618
Alignment:
Q  2 ccctattaaattttcggtttgatttgcaccctcgtaaaatttttattttccggtaaacacctttaatagaccatt 76  Q
    |||||| ||||||||||||||||| |||||||||||||| ||||||||||||| |||||||  |||||| |||||    
T  13952692 ccctataaaattttcggtttgattggcaccctcgtaaaaattttattttccggaaaacacccctaataggccatt 13952618  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #45
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 2 - 76
Target Start/End: Original strand, 18805214 - 18805288
Alignment:
Q  2 ccctattaaattttcggtttgatttgcaccctcgtaaaatttttattttccggtaaacacctttaatagaccatt 76  Q
    |||||| ||||||||||||||||||||| ||||||||| |||||||||||||| |||||||  |||||| |||||    
T  18805214 ccctataaaattttcggtttgatttgcatcctcgtaaattttttattttccggaaaacacccctaataggccatt 18805288  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #46
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 1 - 51
Target Start/End: Complemental strand, 23294741 - 23294691
Alignment:
Q  1 cccctattaaattttcggtttgatttgcaccctcgtaaaatttttattttc 51  Q
    ||||||| |||||||||||||||||||||||||||||||||||||||||||    
T  23294741 cccctataaaattttcggtttgatttgcaccctcgtaaaatttttattttc 23294691  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #47
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 1 - 62
Target Start/End: Complemental strand, 16867995 - 16867934
Alignment:
Q  1 cccctattaaattttcggtttgatttgcaccctcgtaaaatttttattttccggtaaacacc 62  Q
    ||||||| ||||||||||||||||||||||| |||||||||||||||||| ||| |||||||    
T  16867995 cccctataaaattttcggtttgatttgcaccatcgtaaaatttttatttttcggaaaacacc 16867934  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #48
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 1 - 54
Target Start/End: Complemental strand, 26006749 - 26006696
Alignment:
Q  1 cccctattaaattttcggtttgatttgcaccctcgtaaaatttttattttccgg 54  Q
    ||||||| ||||||||||||||||||||||||||||||| ||||||||||||||    
T  26006749 cccctataaaattttcggtttgatttgcaccctcgtaaattttttattttccgg 26006696  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #49
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 4 - 96
Target Start/End: Complemental strand, 27316238 - 27316145
Alignment:
Q  4 ctattaaattttcggtttgatttgcaccctcgtaaaatttttattttccggtaaacacctttaatagaccattc-aaaaccaaaattttttgaa 96  Q
    |||| ||||||| | |||||||||||||||||||||||||||||||| | | ||||| | ||||||| |||||| ||||||||||||| |||||    
T  27316238 ctataaaatttttgttttgatttgcaccctcgtaaaatttttatttttcagaaaacatccttaataggccattcaaaaaccaaaatttcttgaa 27316145  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #50
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 2 - 90
Target Start/End: Complemental strand, 34974236 - 34974147
Alignment:
Q  2 ccctattaaattttcggtttgatttgcaccctcgtaaaatttttattttccggtaaacacctttaatagaccattc-aaaaccaaaattt 90  Q
    |||||| ||||||| ||||||||||  | |||||||||||||||||||||||  ||||||| ||||||| |||||| |||||||||||||    
T  34974236 ccctataaaatttttggtttgatttttatcctcgtaaaatttttattttccgaaaaacacccttaataggccattcaaaaaccaaaattt 34974147  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #51
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 1 - 96
Target Start/End: Complemental strand, 25591214 - 25591118
Alignment:
Q  1 cccctattaaattttcggtttgatttgcaccctcgtaaaatttttattttccggtaaacacctttaatagaccatt-caaaaccaaaattttttgaa 96  Q
    ||||||| |||||||||||||||||||||||||||||||| ||||||||| |   ||||||| || |||| |||||  ||||||||||||| |||||    
T  25591214 cccctataaaattttcggtttgatttgcaccctcgtaaaaattttatttttctaaaaacaccctttataggccattaaaaaaccaaaatttcttgaa 25591118  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #52
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 1 - 128
Target Start/End: Original strand, 29690514 - 29690651
Alignment:
Q  1 cccctattaaattttcggtttgatttgcaccctcgtaaaattttta-ttttccggtaaacacctttaatagaccattc-aaaaccaaaattttttgaa-- 96  Q
    ||||||| ||||||||||||||||||||| ||||||||  | |||| |||||||  ||||||| ||||||| |||||| ||||||||||||| |||||      
T  29690514 cccctataaaattttcggtttgatttgcatcctcgtaatttatttatttttccgaaaaacacccttaataggccattcaaaaaccaaaatttcttgaaaa 29690613  T
Q  97 ------ctgaaaatgacctattaggggtgtttttcgga 128  Q
          ||||||||| ||||||||||||||||| ||||    
T  29690614 aaaattctgaaaatggcctattaggggtgttttccgga 29690651  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #53
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 1 - 61
Target Start/End: Original strand, 30126495 - 30126555
Alignment:
Q  1 cccctattaaattttcggtttgatttgcaccctcgtaaaatttttattttccggtaaacac 61  Q
    ||||||| ||||||||||||||||||||||||| |||||| ||||||||||||| ||||||    
T  30126495 cccctataaaattttcggtttgatttgcacccttgtaaaaattttattttccggaaaacac 30126555  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #54
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 2 - 61
Target Start/End: Complemental strand, 38678411 - 38678352
Alignment:
Q  2 ccctattaaattttcggtttgatttgcaccctcgtaaaatttttattttccggtaaacac 61  Q
    |||||| |||||||||||||||||||||||||||||||| ||||||||| ||| ||||||    
T  38678411 ccctataaaattttcggtttgatttgcaccctcgtaaaaattttatttttcggaaaacac 38678352  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #55
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 1 - 76
Target Start/End: Original strand, 40616249 - 40616324
Alignment:
Q  1 cccctattaaattttcggtttgatttgcaccctcgtaaaatttttattttccggtaaacacctttaatagaccatt 76  Q
    ||||||| ||||||||||||||||||||||||||||||  ||||| | |||||| |||||||| |||||| |||||    
T  40616249 cccctataaaattttcggtttgatttgcaccctcgtaatttttttttcttccggaaaacacctctaataggccatt 40616324  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #56
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 4 - 61
Target Start/End: Original strand, 8405971 - 8406028
Alignment:
Q  4 ctattaaattttcggtttgatttgcaccctcgtaaaatttttattttccggtaaacac 61  Q
    |||| ||||||||||||||||||||||| ||||||||||||||||||| || ||||||    
T  8405971 ctataaaattttcggtttgatttgcaccatcgtaaaatttttattttctggaaaacac 8406028  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #57
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 9 - 62
Target Start/End: Complemental strand, 21000581 - 21000528
Alignment:
Q  9 aaattttcggtttgatttgcaccctcgtaaaatttttattttccggtaaacacc 62  Q
    |||||||||||||||||||||||||||||||| ||||||||||||  |||||||    
T  21000581 aaattttcggtttgatttgcaccctcgtaaaaattttattttccgaaaaacacc 21000528  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #58
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 4 - 81
Target Start/End: Original strand, 22833449 - 22833525
Alignment:
Q  4 ctattaaattttcggtttgatttgcaccctcgtaaaatttttattttccggtaaacacctttaatagaccattcaaaa 81  Q
    |||| |||||||||||||||||||||||||| ||||| |||||||||||   ||||||| ||||||| ||||||||||    
T  22833449 ctataaaattttcggtttgatttgcaccctcataaaa-ttttattttccataaaacacccttaataggccattcaaaa 22833525  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #59
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 1 - 76
Target Start/End: Original strand, 7884828 - 7884904
Alignment:
Q  1 cccctattaaattttcggtttgatttgcaccctcgt-aaaatttttattttccggtaaacacctttaatagaccatt 76  Q
    ||||||| |||||||||||||||||||||||||||| ||||  |||||||||||| |||||||  |||||| |||||    
T  7884828 cccctataaaattttcggtttgatttgcaccctcgtaaaaaaatttattttccggaaaacacccctaataggccatt 7884904  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #60
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 9 - 76
Target Start/End: Original strand, 2841743 - 2841810
Alignment:
Q  9 aaattttcggtttgatttgcaccctcgtaaaatttttattttccggtaaacacctttaatagaccatt 76  Q
    ||||||||||| |||||| ||||||||||||||||||||||||| | |||||||  |||||| |||||    
T  2841743 aaattttcggtctgatttacaccctcgtaaaatttttattttccagaaaacacccctaataggccatt 2841810  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #61
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 12 - 123
Target Start/End: Complemental strand, 2841902 - 2841789
Alignment:
Q  12 ttttcggtttgatttgcaccctcgtaaaatttttattttccggtaaacacctttaatagaccattcaaaaccaaaattttttgaa--ctgaaaatgacct 109  Q
    |||| ||||||||||||||| ||||||||   ||||||||||| ||||||| ||||||| |||||||||| | |||||     ||  ||||||||| |||    
T  2841902 tttttggtttgatttgcaccttcgtaaaaaaattattttccggaaaacacccttaataggccattcaaaaaccaaattaaaaaaattctgaaaatggcct 2841803  T
Q  110 attaggggtgtttt 123  Q
    ||||||||||||||    
T  2841802 attaggggtgtttt 2841789  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #62
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 2 - 76
Target Start/End: Complemental strand, 3922922 - 3922848
Alignment:
Q  2 ccctattaaattttcggtttgatttgcaccctcgtaaaatttttattttccggtaaacacctttaatagaccatt 76  Q
    |||||| ||||||| |||||||||||   ||||||||||||||||||||| || ||||||| ||||||| |||||    
T  3922922 ccctataaaatttttggtttgatttgtgtcctcgtaaaatttttattttctggaaaacacccttaataggccatt 3922848  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #63
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 4 - 53
Target Start/End: Complemental strand, 27451518 - 27451469
Alignment:
Q  4 ctattaaattttcggtttgatttgcaccctcgtaaaatttttattttccg 53  Q
    |||| |||||||||||||||||| |||||| |||||||||||||||||||    
T  27451518 ctataaaattttcggtttgattttcacccttgtaaaatttttattttccg 27451469  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #64
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 1 - 68
Target Start/End: Complemental strand, 10542284 - 10542217
Alignment:
Q  1 cccctattaaattttcggtttgatttgcaccctcgtaaaatttttattttccggtaaacacctttaat 68  Q
    ||||||| ||||||||  ||||||||||| ||||||||||| ||| |||||||| ||||||| |||||    
T  10542284 cccctataaaattttcaatttgatttgcatcctcgtaaaatcttttttttccggaaaacacccttaat 10542217  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #65
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 9 - 60
Target Start/End: Complemental strand, 22634344 - 22634293
Alignment:
Q  9 aaattttcggtttgatttgcaccctcgtaaaatttttattttccggtaaaca 60  Q
    |||||||||||||||||| |||| ||||||||||||||||||| || |||||    
T  22634344 aaattttcggtttgatttacaccttcgtaaaatttttattttctggaaaaca 22634293  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #66
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 1 - 40
Target Start/End: Complemental strand, 27830193 - 27830154
Alignment:
Q  1 cccctattaaattttcggtttgatttgcaccctcgtaaaa 40  Q
    ||||||| ||||||||||||||||||||||||||||||||    
T  27830193 cccctataaaattttcggtttgatttgcaccctcgtaaaa 27830154  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #67
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 9 - 76
Target Start/End: Original strand, 29989522 - 29989589
Alignment:
Q  9 aaattttcggtttgatttgcaccctcgtaaaatttttattttccggtaaacacctttaatagaccatt 76  Q
    ||||||| |||||||||||||||||||||||| ||||||||| ||  |||||||  |||||| |||||    
T  29989522 aaatttttggtttgatttgcaccctcgtaaaaattttatttttcgaaaaacacccctaataggccatt 29989589  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #68
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 18 - 76
Target Start/End: Original strand, 25881099 - 25881157
Alignment:
Q  18 gtttgatttgcaccctcgtaaaatttttattttccggtaaacacctttaatagaccatt 76  Q
    |||||||||||||| |||||||||||||||||| ||| |||||||  |||||| |||||    
T  25881099 gtttgatttgcaccatcgtaaaatttttatttttcggaaaacacccctaataggccatt 25881157  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #69
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 1 - 39
Target Start/End: Original strand, 27316054 - 27316092
Alignment:
Q  1 cccctattaaattttcggtttgatttgcaccctcgtaaa 39  Q
    ||||||| |||||||||||||||||||||||||||||||    
T  27316054 cccctataaaattttcggtttgatttgcaccctcgtaaa 27316092  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #70
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 2 - 76
Target Start/End: Original strand, 34974054 - 34974127
Alignment:
Q  2 ccctattaaattttcggtttgatttgcaccctcgtaaaatttttattttccggtaaacacctttaatagaccatt 76  Q
    |||||| |||||||| |||||||||||||||||||||||   ||||||||| | ||||||| ||||||| |||||    
T  34974054 ccctataaaattttcagtttgatttgcaccctcgtaaaaaaattattttccag-aaacacccttaataggccatt 34974127  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #71
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 2 - 52
Target Start/End: Original strand, 36320659 - 36320709
Alignment:
Q  2 ccctattaaattttcggtttgatttgcaccctcgtaaaatttttattttcc 52  Q
    |||||| |||||||| |||||||||||||| ||||||||| ||||||||||    
T  36320659 ccctataaaattttcagtttgatttgcaccgtcgtaaaatatttattttcc 36320709  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #72
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 3 - 81
Target Start/End: Complemental strand, 36873181 - 36873103
Alignment:
Q  3 cctattaaattttcggtttgatttgcaccctcgtaaaatttttattttccggtaaacacctttaatagaccattcaaaa 81  Q
    ||||| ||||||||||||||||||||| ||||||||||  ||||||||  || ||||| | |||||||  |||||||||    
T  36873181 cctataaaattttcggtttgatttgcatcctcgtaaaaaatttattttttggaaaacatccttaataggtcattcaaaa 36873103  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #73
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 1 - 62
Target Start/End: Complemental strand, 7243301 - 7243240
Alignment:
Q  1 cccctattaaattttcggtttgatttgcaccctcgtaaaatttttattttccggtaaacacc 62  Q
    ||||||| ||||||||||||||| ||||| ||| |||||| |||| |||||||| |||||||    
T  7243301 cccctataaaattttcggtttgaattgcatccttgtaaaaatttttttttccggaaaacacc 7243240  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #74
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 4 - 69
Target Start/End: Complemental strand, 19635082 - 19635017
Alignment:
Q  4 ctattaaattttcggtttgatttgcaccctcgtaaaatttttattttccggtaaacacctttaata 69  Q
    |||| ||||||||||||||||| |||||||| ||||| ||||||||| | | ||||||| ||||||    
T  19635082 ctataaaattttcggtttgattagcaccctcataaaaattttatttttcagaaaacacccttaata 19635017  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #75
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 1 - 128
Target Start/End: Original strand, 20884083 - 20884220
Alignment:
Q  1 cccctattaaattttcggtttgatttgcaccctcgtaaaatttttattttccggtaaacacctttaatagaccattc-aaaaccaaaattttttgaa--- 96  Q
    ||||||| ||||||||||||||||||||||||| ||||||      | |||||| ||||||| ||||||| |||||| |||| |||||||| |||||       
T  20884083 cccctataaaattttcggtttgatttgcacccttgtaaaaaaaaattcttccggaaaacacccttaataggccattcaaaaatcaaaatttcttgaaaaa 20884182  T
Q  97 ------ctgaaaatgacctattaggggtgtttttcgga 128  Q
          ||||||||| ||||||||||||||||| ||||    
T  20884183 aaaaatctgaaaatggcctattaggggtgttttccgga 20884220  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #76
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 9 - 63
Target Start/End: Complemental strand, 22833628 - 22833572
Alignment:
Q  9 aaattttcggtttgatttgcaccctcgtaaa--atttttattttccggtaaacacct 63  Q
    |||||||||||||||||||||||||||||||  ||| || |||||||| ||||||||    
T  22833628 aaattttcggtttgatttgcaccctcgtaaattattatttttttccggaaaacacct 22833572  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #77
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 41
Target Start/End: Complemental strand, 26405114 - 26405074
Alignment:
Q  1 cccctattaaattttcggtttgatttgcaccctcgtaaaat 41  Q
    ||||||| ||||||||||||||||||||||||| |||||||    
T  26405114 cccctataaaattttcggtttgatttgcacccttgtaaaat 26405074  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #78
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 1 - 76
Target Start/End: Complemental strand, 13006655 - 13006580
Alignment:
Q  1 cccctattaaattttcggtttgatttgcaccctcgtaaaatttttattttccggtaaacacctttaatagaccatt 76  Q
    ||||||| ||||||| ||||||||||||||| ||||||  ||||| | || ||| |||||||  ||||||||||||    
T  13006655 cccctataaaatttttggtttgatttgcaccttcgtaatttttttttctttcggaaaacacccctaatagaccatt 13006580  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #79
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 1 - 52
Target Start/End: Original strand, 26719370 - 26719421
Alignment:
Q  1 cccctattaaattttcggtttgatttgcaccctcgtaaaatttttattttcc 52  Q
    ||||||| ||||||||||||||| ||||| |||||||||| |||| ||||||    
T  26719370 cccctataaaattttcggtttgaattgcatcctcgtaaaactttttttttcc 26719421  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #80
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 1 - 52
Target Start/End: Original strand, 26989114 - 26989165
Alignment:
Q  1 cccctattaaattttcggtttgatttgcaccctcgtaaaatttttattttcc 52  Q
    ||||||| ||||||||||||||| ||||| |||||||||| |||| ||||||    
T  26989114 cccctataaaattttcggtttgaattgcatcctcgtaaaactttttttttcc 26989165  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #81
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 19 - 96
Target Start/End: Original strand, 38941490 - 38941567
Alignment:
Q  19 tttgatttgcaccctcgtaaaatttttattttccggtaaacacctttaatagaccattc-aaaaccaaaattttttgaa 96  Q
    ||||||||| ||| ||||||| |||||||||||||  ||||||| || |||| |||||| ||||||||||||| |||||    
T  38941490 tttgatttgtaccatcgtaaattttttattttccgaaaaacaccctt-ataggccattcaaaaaccaaaatttcttgaa 38941567  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #82
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 2 - 36
Target Start/End: Original strand, 42418712 - 42418746
Alignment:
Q  2 ccctattaaattttcggtttgatttgcaccctcgt 36  Q
    |||||| ||||||||||||||||||||||||||||    
T  42418712 ccctataaaattttcggtttgatttgcaccctcgt 42418746  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #83
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 9 - 62
Target Start/End: Original strand, 7242695 - 7242748
Alignment:
Q  9 aaattttcggtttgatttgcaccctcgtaaaatttttattttccggtaaacacc 62  Q
    ||||||||||||||| ||||| ||| |||||| |||| |||||||| |||||||    
T  7242695 aaattttcggtttgaattgcatccttgtaaaactttttttttccggaaaacacc 7242748  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #84
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 50
Target Start/End: Original strand, 7578150 - 7578199
Alignment:
Q  1 cccctattaaattttcggtttgatttgcaccctcgtaaaatttttatttt 50  Q
    ||||||| ||||||||||||||||||||| ||| |||||| |||| ||||    
T  7578150 cccctataaaattttcggtttgatttgcatccttgtaaaacttttttttt 7578199  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #85
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 62
Target Start/End: Complemental strand, 26524628 - 26524567
Alignment:
Q  1 cccctattaaattttcggtttgatttgcaccctcgtaaaatttttattttccggtaaacacc 62  Q
    ||||||| ||||||||||||||||||||| ||| ||||| ||||| || | ||| |||||||    
T  26524628 cccctataaaattttcggtttgatttgcatccttgtaaatttttttttcttcggaaaacacc 26524567  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #86
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 23 - 90
Target Start/End: Original strand, 5824469 - 5824537
Alignment:
Q  23 atttgcaccctcgtaaaatttttattttccggtaaacacctttaatagaccattc-aaaaccaaaattt 90  Q
    |||| |||| |||||||||||||||||| ||| ||| ||| ||||| | |||||| |||||||||||||    
T  5824469 atttccaccgtcgtaaaatttttatttttcggaaaatacccttaattggccattcaaaaaccaaaattt 5824537  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #87
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 4 - 76
Target Start/End: Complemental strand, 13079676 - 13079604
Alignment:
Q  4 ctattaaattttcggtttgatttgcaccctcgtaaaatttttattttccggtaaacacctttaatagaccatt 76  Q
    |||| ||||||| ||||||||||||||| ||||||  ||||| | || ||| |||||||  ||||||||||||    
T  13079676 ctataaaatttttggtttgatttgcaccttcgtaatttttttttctttcggaaaacacccctaatagaccatt 13079604  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 71; Significance: 4e-32; HSPs: 95)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 71; E-Value: 4e-32
Query Start/End: Original strand, 1 - 90
Target Start/End: Original strand, 3216099 - 3216189
Alignment:
Q  1 cccctattaaattttcggtttgatttgcaccctcgtaaaatttttattttccggtaaacacctttaatagaccattc-aaaaccaaaattt 90  Q
    ||||||| |||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||| |||||| |||||||||||||    
T  3216099 cccctataaaattttcggtttgatttgcaccctcgtaaaatttttattttccggaaaacacctttaataggccattcaaaaaccaaaattt 3216189  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 1 - 96
Target Start/End: Complemental strand, 15984416 - 15984320
Alignment:
Q  1 cccctattaaattttcggtttgatttgcaccctcgtaaaatttttattttccggtaaacacctttaatagaccattc-aaaaccaaaattttttgaa 96  Q
    ||||||| |||||||||||||||||| ||||||||||||||||||||||||||| ||||||| ||||||| |||||| ||||||||||||| |||||    
T  15984416 cccctataaaattttcggtttgatttccaccctcgtaaaatttttattttccggaaaacacccttaataggccattcaaaaaccaaaatttcttgaa 15984320  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 1 - 96
Target Start/End: Complemental strand, 33583018 - 33582922
Alignment:
Q  1 cccctattaaattttcggtttgatttgcaccctcgtaaaatttttattttccggtaaacacctttaatagaccattc-aaaaccaaaattttttgaa 96  Q
    ||||||| |||||||||||||||||||||||||||||||| ||||||||||||| ||||||| ||||||| |||||| ||||||||||||| |||||    
T  33583018 cccctataaaattttcggtttgatttgcaccctcgtaaaaattttattttccggaaaacaccattaataggccattcaaaaaccaaaatttcttgaa 33582922  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 1 - 96
Target Start/End: Complemental strand, 41745324 - 41745228
Alignment:
Q  1 cccctattaaattttcggtttgatttgcaccctcgtaaaatttttattttccggtaaacacctttaatagaccattc-aaaaccaaaattttttgaa 96  Q
    ||||||| |||||||||||||||||||||||||||||||||||||||||| ||| ||||||| ||||||| |||||| ||||||||||||| |||||    
T  41745324 cccctataaaattttcggtttgatttgcaccctcgtaaaatttttatttttcggaaaacacccttaataggccattcaaaaaccaaaatttcttgaa 41745228  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 64; E-Value: 6e-28
Query Start/End: Original strand, 4 - 123
Target Start/End: Complemental strand, 17358236 - 17358108
Alignment:
Q  4 ctattaaattttcggtttgatttgcaccctcgtaaaatttttattttccggtaaacacctttaatagaccattc-aaaaccaaaattttttgaa------ 96  Q
    |||| |||||||||||||||||| ||||||||||||||||||||||||||| ||||||| ||||||| |||||| ||||||||||||| |||||          
T  17358236 ctataaaattttcggtttgattttcaccctcgtaaaatttttattttccggaaaacacccttaataggccattcaaaaaccaaaatttcttgaaaaaaaa 17358137  T
Q  97 --ctgaaaatgacctattaggggtgtttt 123  Q
      ||||||||| |||||||||||||||||    
T  17358136 ttctgaaaatggcctattaggggtgtttt 17358108  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 11 - 93
Target Start/End: Original strand, 4098133 - 4098215
Alignment:
Q  11 attttcggtttgatttgcaccctcgtaaaatttttattttccggtaaacacctttaatagaccattcaaaaccaaaatttttt 93  Q
    |||||||||||||||||||||||||||||||||||||||||||| ||||||| ||||||| |||||||||| | |||||||||    
T  4098133 attttcggtttgatttgcaccctcgtaaaatttttattttccggaaaacacccttaataggccattcaaaaaccaaatttttt 4098215  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 1 - 123
Target Start/End: Complemental strand, 11666991 - 11666860
Alignment:
Q  1 cccctattaaattttcggtttgatttgcaccctcgtaaaatttttattttccggtaaacacctttaatagaccattc-aaaaccaaaattttttgaa--- 96  Q
    ||||||| |||||||| |||| |||||||||||| ||||||||||||||||||| ||||||| |||||||||||||| ||||||||||||| |||||       
T  11666991 cccctataaaattttcagtttaatttgcaccctcataaaatttttattttccggaaaacacccttaatagaccattcaaaaaccaaaatttattgaaaaa 11666892  T
Q  97 -----ctgaaaatgacctattaggggtgtttt 123  Q
         ||||||||| |||||||||||||||||    
T  11666891 aaattctgaaaatggcctattaggggtgtttt 11666860  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 2 - 95
Target Start/End: Complemental strand, 22947601 - 22947507
Alignment:
Q  2 ccctattaaattttcggtttgatttgcaccctcgtaaaatttttattttccggtaaacacctttaatagaccattc-aaaaccaaaattttttga 95  Q
    |||||| |||||||| ||||||||||||||||||||||||||||||||||||| ||||||| ||||||| |||||| |||| |||||||||||||    
T  22947601 ccctataaaattttcagtttgatttgcaccctcgtaaaatttttattttccggaaaacacccttaataggccattcaaaaatcaaaattttttga 22947507  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 9 - 96
Target Start/End: Original strand, 12179988 - 12180076
Alignment:
Q  9 aaattttcggtttgatttgcaccctcgtaaaatttttattttccggtaaacacctttaatagaccattc-aaaaccaaaattttttgaa 96  Q
    |||||||||||||||||| ||||||||||||||||||||||||||| ||||||| ||||||| |||||| ||||||||||||| |||||    
T  12179988 aaattttcggtttgattttcaccctcgtaaaatttttattttccggaaaacacccttaataggccattcaaaaaccaaaatttcttgaa 12180076  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 1 - 96
Target Start/End: Original strand, 46483672 - 46483768
Alignment:
Q  1 cccctattaaattttcggtttgatttgcaccctcgtaaaatttttattttccggtaaacacctttaatagaccattc-aaaaccaaaattttttgaa 96  Q
    ||||||| |||||||||||||||||| |||||| |||||||||||||||||||| ||||||| ||||||| |||||| ||||||||||||| |||||    
T  46483672 cccctataaaattttcggtttgattttcacccttgtaaaatttttattttccggaaaacacccttaataggccattcaaaaaccaaaatttcttgaa 46483768  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 1 - 128
Target Start/End: Original strand, 7881466 - 7881602
Alignment:
Q  1 cccctattaaattttcggtttgatttgcaccctcgtaaaatttttattttccggtaaacacctttaatagaccattc-aaaaccaaaattttttgaa--- 96  Q
    ||||||| |||||||| ||||||||||||||||||||||| ||||||||||||| ||||| | ||||||| |||||| ||||||||||||| |||||       
T  7881466 cccctataaaattttcagtttgatttgcaccctcgtaaaaattttattttccggaaaacaaccttaataggccattcaaaaaccaaaatttcttgaaaaa 7881565  T
Q  97 -----ctgaaaatgacctattaggggtgtttttcgga 128  Q
         ||||||||| ||||||||||||||||| ||||    
T  7881566 aaattctgaaaatggcctattaggggtgttttccgga 7881602  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 1 - 128
Target Start/End: Original strand, 43742029 - 43742165
Alignment:
Q  1 cccctattaaattttcggtttgatttgcaccctcgtaaaatttttattttccggtaaacacctttaatagaccattc-aaaaccaaaattttttgaa--- 96  Q
    ||||||| |||||||||||||||||||||||||||||||| |||||||||||   ||||||| ||||||| |||||| ||||||||||||| |||||       
T  43742029 cccctataaaattttcggtttgatttgcaccctcgtaaaaattttattttccaaaaaacaccattaataggccattcaaaaaccaaaatttcttgaaaaa 43742128  T
Q  97 -----ctgaaaatgacctattaggggtgtttttcgga 128  Q
         ||||||||| ||||||||||||||||| ||||    
T  43742129 agtttctgaaaatggcctattaggggtgttttccgga 43742165  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 59; E-Value: 6e-25
Query Start/End: Original strand, 1 - 90
Target Start/End: Complemental strand, 39459579 - 39459489
Alignment:
Q  1 cccctattaaattttcggtttgatttgcaccctcgtaaaatttttattttccggtaaacacctttaatagaccattc-aaaaccaaaattt 90  Q
    ||||||| |||||||||||||||||||||||||||||||||||||||||||||| ||||||| || || | |||||| |||||||||||||    
T  39459579 cccctataaaattttcggtttgatttgcaccctcgtaaaatttttattttccggaaaacaccctttatcggccattcaaaaaccaaaattt 39459489  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 59; E-Value: 6e-25
Query Start/End: Original strand, 1 - 87
Target Start/End: Complemental strand, 41877321 - 41877235
Alignment:
Q  1 cccctattaaattttcggtttgatttgcaccctcgtaaaatttttattttccggtaaacacctttaatagaccattcaaaaccaaaa 87  Q
    ||||||| ||||||||||||||||||||||||||||||| ||||||||||| || ||||||| ||||||| |||||||||| |||||    
T  41877321 cccctataaaattttcggtttgatttgcaccctcgtaaattttttattttctggaaaacacccttaataggccattcaaaaacaaaa 41877235  T

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Target: chr7; HSP #15
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 4 - 81
Target Start/End: Complemental strand, 30631600 - 30631523
Alignment:
Q  4 ctattaaattttcggtttgatttgcaccctcgtaaaatttttattttccggtaaacacctttaatagaccattcaaaa 81  Q
    |||| ||||||||||||||||||||||||||||||| |||||||||||||| ||||||| ||||||| ||||||||||    
T  30631600 ctataaaattttcggtttgatttgcaccctcgtaaattttttattttccggaaaacacccttaataggccattcaaaa 30631523  T

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Target: chr7; HSP #16
Raw Score: 57; E-Value: 9e-24
Query Start/End: Original strand, 1 - 96
Target Start/End: Original strand, 16274519 - 16274615
Alignment:
Q  1 cccctattaaattttcggtttgatttgcaccctcgtaaaatttttattttccggtaaacacctttaatagaccattc-aaaaccaaaattttttgaa 96  Q
    ||||||| ||||||||| |||||||||||||||||||||| ||| ||||||||| ||||||| ||||||| |||||| ||||||||||||| |||||    
T  16274519 cccctataaaattttcgatttgatttgcaccctcgtaaaaatttaattttccggaaaacacccttaataggccattcaaaaaccaaaatttcttgaa 16274615  T

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Target: chr7; HSP #17
Raw Score: 57; E-Value: 9e-24
Query Start/End: Original strand, 1 - 96
Target Start/End: Original strand, 30441233 - 30441329
Alignment:
Q  1 cccctattaaattttcggtttgatttgcaccctcgtaaaatttttattttccggtaaacacctttaatagaccattc-aaaaccaaaattttttgaa 96  Q
    ||||||| |||||||||||||||||| ||||||||||||| ||||||||| ||| || |||||||||||| |||||| ||||||||||||| |||||    
T  30441233 cccctataaaattttcggtttgattttcaccctcgtaaaaattttatttttcggaaagcacctttaataggccattcaaaaaccaaaatttcttgaa 30441329  T

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Target: chr7; HSP #18
Raw Score: 57; E-Value: 9e-24
Query Start/End: Original strand, 1 - 96
Target Start/End: Complemental strand, 38416131 - 38416036
Alignment:
Q  1 cccctattaaattttcggtttgatttgcaccctcgtaaaatttttattttccggtaaacacctttaatagaccattc-aaaaccaaaattttttgaa 96  Q
    ||||||| |||||||||||||||||||||||||||||||||||||||||| ||| |||||||  |||||| |||||| ||||||||||||| |||||    
T  38416131 cccctataaaattttcggtttgatttgcaccctcgtaaaatttttatttttcggaaaacacc-ctaataggccattcaaaaaccaaaatttcttgaa 38416036  T

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Target: chr7; HSP #19
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 9 - 128
Target Start/End: Complemental strand, 38652012 - 38651884
Alignment:
Q  9 aaattttcggtttgatttgcaccctcgtaaaatttttattttccggtaaacacctttaatagaccattc-aaaaccaaaattttttgaa--------ctg 99  Q
    |||||||||||||||||||||||||||||||| ||||||||| ||| ||||||| ||||||| |||||| ||||||||||| | |||||        |||    
T  38652012 aaattttcggtttgatttgcaccctcgtaaaaattttatttttcggaaaacacccttaataggccattcaaaaaccaaaatatcttgaaaaaaaattctg 38651913  T
Q  100 aaaatgacctattaggggtgtttttcgga 128  Q
    |||||| ||||||||||||||||| ||||    
T  38651912 aaaatggcctattaggggtgttttccgga 38651884  T

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Target: chr7; HSP #20
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 1 - 87
Target Start/End: Original strand, 14542660 - 14542746
Alignment:
Q  1 cccctattaaattttcggtttgatttgcaccctcgtaaaatttttattttccggtaaacacctttaatagaccattcaaaaccaaaa 87  Q
    ||||||| ||||||||||||||||||||||||||||||||  |||||||| ||| ||||||| ||||||| |||||||||| |||||    
T  14542660 cccctataaaattttcggtttgatttgcaccctcgtaaaaaatttatttttcggaaaacacccttaataggccattcaaaaacaaaa 14542746  T

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Target: chr7; HSP #21
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 1 - 96
Target Start/End: Original strand, 31079160 - 31079256
Alignment:
Q  1 cccctattaaattttcggtttgatttgcaccctcgtaaaatttttattttccggtaaacacctttaatagaccattc-aaaaccaaaattttttgaa 96  Q
    ||||||| ||||||||||||||||||||||||| |||||||| ||||||| ||| ||||||| |||||||  ||||| ||||||||||||| |||||    
T  31079160 cccctataaaattttcggtttgatttgcaccctggtaaaattgttatttttcggaaaacacccttaataggtcattcaaaaaccaaaatttcttgaa 31079256  T

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Target: chr7; HSP #22
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 1 - 96
Target Start/End: Original strand, 37101361 - 37101457
Alignment:
Q  1 cccctattaaattttcggtttgatttgcaccctcgtaaaatttttattttccggtaaacacctttaatagaccattc-aaaaccaaaattttttgaa 96  Q
    ||||||| |||||||| ||||||||||||||||||||||| ||||||||| ||| ||||| | ||||||| |||||| ||||||||||||| |||||    
T  37101361 cccctataaaattttcagtttgatttgcaccctcgtaaaaattttatttttcggaaaacatccttaataggccattcaaaaaccaaaatttcttgaa 37101457  T

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Target: chr7; HSP #23
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 4 - 76
Target Start/End: Complemental strand, 43742211 - 43742139
Alignment:
Q  4 ctattaaattttcggtttgatttgcaccctcgtaaaatttttattttccggtaaacacctttaatagaccatt 76  Q
    |||| |||||||||||||||||||||||||||||||||||||||||||||| |||||||  |||||| |||||    
T  43742211 ctataaaattttcggtttgatttgcaccctcgtaaaatttttattttccggaaaacacccctaataggccatt 43742139  T

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Target: chr7; HSP #24
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 1 - 76
Target Start/End: Original strand, 22947417 - 22947492
Alignment:
Q  1 cccctattaaattttcggtttgatttgcaccctcgtaaaatttttattttccggtaaacacctttaatagaccatt 76  Q
    ||||||| ||||||||||||||||||||||||||||||||||||||||||| || |||||||  |||||| |||||    
T  22947417 cccctataaaattttcggtttgatttgcaccctcgtaaaatttttattttcaggaaaacacccctaataggccatt 22947492  T

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Target: chr7; HSP #25
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 1 - 60
Target Start/End: Complemental strand, 30441418 - 30441359
Alignment:
Q  1 cccctattaaattttcggtttgatttgcaccctcgtaaaatttttattttccggtaaaca 60  Q
    ||||||| |||||||||||||||||||||||||||||||||||||||||||||| |||||    
T  30441418 cccctataaaattttcggtttgatttgcaccctcgtaaaatttttattttccggaaaaca 30441359  T

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Target: chr7; HSP #26
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 1 - 76
Target Start/End: Original strand, 37391230 - 37391305
Alignment:
Q  1 cccctattaaattttcggtttgatttgcaccctcgtaaaatttttattttccggtaaacacctttaatagaccatt 76  Q
    ||||||| |||||||||||||||||||||||||||||||||||||||||| ||| |||||||  |||||| |||||    
T  37391230 cccctataaaattttcggtttgatttgcaccctcgtaaaatttttatttttcggaaaacacccctaataggccatt 37391305  T

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Target: chr7; HSP #27
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 1 - 76
Target Start/End: Original strand, 38415947 - 38416022
Alignment:
Q  1 cccctattaaattttcggtttgatttgcaccctcgtaaaatttttattttccggtaaacacctttaatagaccatt 76  Q
    ||||||| |||||||||||||||||| ||||||||||||||||||||||||||| |||||||  |||||| |||||    
T  38415947 cccctataaaattttcggtttgatttacaccctcgtaaaatttttattttccggaaaacacccctaataggccatt 38416022  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 2 - 76
Target Start/End: Complemental strand, 7881650 - 7881576
Alignment:
Q  2 ccctattaaattttcggtttgatttgcaccctcgtaaaatttttattttccggtaaacacctttaatagaccatt 76  Q
    |||||| ||||| |||||||||||||||||||||||||||||||||||||||| |||||||  |||||| |||||    
T  7881650 ccctataaaattctcggtttgatttgcaccctcgtaaaatttttattttccggaaaacacccctaataggccatt 7881576  T

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Target: chr7; HSP #29
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 9 - 90
Target Start/End: Complemental strand, 11469112 - 11469030
Alignment:
Q  9 aaattttcggtttgatttgcaccctcgtaaaatttttattttccggtaaacacctttaatagacca-ttcaaaaccaaaattt 90  Q
    ||||||||||||||||||||||||||||||||||| |||||||||| ||||| | ||||||| ||| || |||||||||||||    
T  11469112 aaattttcggtttgatttgcaccctcgtaaaatttatattttccggaaaacatccttaataggccatttaaaaaccaaaattt 11469030  T

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Target: chr7; HSP #30
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 2 - 76
Target Start/End: Complemental strand, 12180164 - 12180090
Alignment:
Q  2 ccctattaaattttcggtttgatttgcaccctcgtaaaatttttattttccggtaaacacctttaatagaccatt 76  Q
    |||||| |||||||||||||||||||||||||||||||||||||||||||||| ||| |||  |||||| |||||    
T  12180164 ccctataaaattttcggtttgatttgcaccctcgtaaaatttttattttccggaaaatacccctaataggccatt 12180090  T

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Target: chr7; HSP #31
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 1 - 94
Target Start/End: Original strand, 20033713 - 20033807
Alignment:
Q  1 cccctattaaattttcggtttgatttgcaccctcgtaaaatttttattttccggtaaacacctttaatagaccattc-aaaaccaaaattttttg 94  Q
    ||||||| ||||||||||||||||||||||  | ||||| |||||||||||||| ||||||| ||||||| |||||| |||| ||||||||||||    
T  20033713 cccctataaaattttcggtttgatttgcacttttgtaaattttttattttccggaaaacacccttaataggccattcaaaaatcaaaattttttg 20033807  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 11 - 81
Target Start/End: Complemental strand, 28311330 - 28311260
Alignment:
Q  11 attttcggtttgatttgcaccctcgtaaaatttttattttccggtaaacacctttaatagaccattcaaaa 81  Q
    |||||||||||||||||||||||||||||| |||||||| |||| ||||||| ||||||| ||||||||||    
T  28311330 attttcggtttgatttgcaccctcgtaaaaattttatttaccggaaaacacccttaataggccattcaaaa 28311260  T

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Target: chr7; HSP #33
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 2 - 76
Target Start/End: Original strand, 30631418 - 30631492
Alignment:
Q  2 ccctattaaattttcggtttgatttgcaccctcgtaaaatttttattttccggtaaacacctttaatagaccatt 76  Q
    |||||| |||||||||||||||||||||||||||||||| ||||||||||||| |||||||  |||||| |||||    
T  30631418 ccctataaaattttcggtttgatttgcaccctcgtaaaaattttattttccgggaaacacccataataggccatt 30631492  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 4 - 96
Target Start/End: Original strand, 21872165 - 21872257
Alignment:
Q  4 ctattaaattttcggtttgatttgcaccctcgtaaaatttttattttccggtaaacacctttaatagaccattc-aaaaccaaaattttttgaa 96  Q
    |||| |||||||||||||||||||||||||||||||| ||||||||| ||| ||||||| ||  ||| |||||| |||||||||||||||||||    
T  21872165 ctataaaattttcggtttgatttgcaccctcgtaaaa-ttttatttttcggaaaacacccttcgtaggccattcaaaaaccaaaattttttgaa 21872257  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 4 - 96
Target Start/End: Complemental strand, 46134858 - 46134765
Alignment:
Q  4 ctattaaattttcggtttgatttgcaccctcgtaaaatttttattttccggtaaacacctttaatagaccattc-aaaaccaaaattttttgaa 96  Q
    |||| ||||||||||||||||||| ||||||||||||  ||||||||| || ||||||| ||||||| |||||| ||||||||||||| |||||    
T  46134858 ctataaaattttcggtttgatttgtaccctcgtaaaaaatttattttctggaaaacacccttaataggccattcaaaaaccaaaatttcttgaa 46134765  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 1 - 62
Target Start/End: Complemental strand, 47668359 - 47668298
Alignment:
Q  1 cccctattaaattttcggtttgatttgcaccctcgtaaaatttttattttccggtaaacacc 62  Q
    ||||||| |||||||||||||||||||||||||||||||||||||||||||||  |||||||    
T  47668359 cccctataaaattttcggtttgatttgcaccctcgtaaaatttttattttccgaaaaacacc 47668298  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 9 - 96
Target Start/End: Original strand, 30538196 - 30538283
Alignment:
Q  9 aaattttcggtttgatttgcaccctcgtaaaatttttattttccggtaaacacctttaatagaccattc-aaaaccaaaattttttgaa 96  Q
    |||||||||||||||||| |||| |||||||| ||||||||||||| ||||||| ||||||| |||||| ||||||||||||| |||||    
T  30538196 aaattttcggtttgattttcacc-tcgtaaaaattttattttccggaaaacacccttaataggccattcaaaaaccaaaatttcttgaa 30538283  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 1 - 81
Target Start/End: Complemental strand, 35077864 - 35077784
Alignment:
Q  1 cccctattaaattttcggtttgatttgcaccctcgtaaaatttttattttccggtaaacacctttaatagaccattcaaaa 81  Q
    ||||||| ||||||||||||||||||  |||||||||||||||||||||| ||  ||||||| ||||||| ||||||||||    
T  35077864 cccctataaaattttcggtttgatttttaccctcgtaaaatttttatttttcgaaaaacacccttaataggccattcaaaa 35077784  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 1 - 69
Target Start/End: Complemental strand, 37446701 - 37446633
Alignment:
Q  1 cccctattaaattttcggtttgatttgcaccctcgtaaaatttttattttccggtaaacacctttaata 69  Q
    ||||||| |||||||||||||||||| ||| ||||||||||||||||||||||| ||||||| ||||||    
T  37446701 cccctataaaattttcggtttgatttacactctcgtaaaatttttattttccggaaaacacccttaata 37446633  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 1 - 76
Target Start/End: Original strand, 11666806 - 11666881
Alignment:
Q  1 cccctattaaattttcggtttgatttgcaccctcgtaaaatttttattttccggtaaacacctttaatagaccatt 76  Q
    ||||||| ||||||| ||||||||||||||||||||||||||||||||||| || |||||||  |||||| |||||    
T  11666806 cccctataaaatttttggtttgatttgcaccctcgtaaaatttttattttctggaaaacacccctaataggccatt 11666881  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 9 - 95
Target Start/End: Original strand, 18449416 - 18449503
Alignment:
Q  9 aaattttcggtttgatttgcaccctcgtaaaatttttattttccggtaaacacctttaatagaccattc-aaaaccaaaattttttga 95  Q
    ||||||||||||||||||||||||||||||||  ||||| |||||| ||||||| || |||| |||||| ||||||||||||| ||||    
T  18449416 aaattttcggtttgatttgcaccctcgtaaaaaatttatattccggaaaacaccctttataggccattcaaaaaccaaaatttcttga 18449503  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 1 - 76
Target Start/End: Complemental strand, 31079345 - 31079270
Alignment:
Q  1 cccctattaaattttcggtttgatttgcaccctcgtaaaatttttattttccggtaaacacctttaatagaccatt 76  Q
    ||||||| |||||||||||||||||| ||||||||||||| ||||||||||||| |||||||  |||||| |||||    
T  31079345 cccctataaaattttcggtttgattttcaccctcgtaaaaattttattttccggaaaacacccctaataggccatt 31079270  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 1 - 76
Target Start/End: Original strand, 41877136 - 41877211
Alignment:
Q  1 cccctattaaattttcggtttgatttgcaccctcgtaaaatttttattttccggtaaacacctttaatagaccatt 76  Q
    ||||||| |||||||||||||||||||||||||||||||| |||||||||| || |||||||  |||||| |||||    
T  41877136 cccctataaaattttcggtttgatttgcaccctcgtaaaaattttattttctggaaaacacccctaataggccatt 41877211  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 1 - 76
Target Start/End: Original strand, 47668178 - 47668253
Alignment:
Q  1 cccctattaaattttcggtttgatttgcaccctcgtaaaatttttattttccggtaaacacctttaatagaccatt 76  Q
    ||||||| ||||||||||||||||||||||||||||||||  |||||||||||| |||||||  |||||| |||||    
T  47668178 cccctataaaattttcggtttgatttgcaccctcgtaaaaaatttattttccggaaaacacccctaataggccatt 47668253  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 3 - 96
Target Start/End: Original strand, 31298600 - 31298694
Alignment:
Q  3 cctattaaattttcggtttgatttgcaccctcgtaaaatttttattttccggtaaacacctttaatagaccatt-caaaaccaaaattttttgaa 96  Q
    ||||| |||||||||||||||||| |||| |||||||||||||||||||||  ||| ||| ||||||| |||||  ||||||||||||| |||||    
T  31298600 cctataaaattttcggtttgatttacaccatcgtaaaatttttattttccgaaaaatacccttaataggccattgaaaaaccaaaatttcttgaa 31298694  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 1 - 62
Target Start/End: Complemental strand, 3687842 - 3687781
Alignment:
Q  1 cccctattaaattttcggtttgatttgcaccctcgtaaaatttttattttccggtaaacacc 62  Q
    ||||||| ||||||||||||||||||||||||||||||||||||  |||||||| |||||||    
T  3687842 cccctataaaattttcggtttgatttgcaccctcgtaaaattttatttttccggaaaacacc 3687781  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #47
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 1 - 96
Target Start/End: Complemental strand, 24932188 - 24932091
Alignment:
Q  1 cccctattaaattttcggtttgatttgcaccctcgtaaaat-ttttattttccggtaaacacctttaatagaccattc-aaaaccaaaattttttgaa 96  Q
    ||||||| ||||||||||||||||||||| ||||||||||| | || |||||||  ||||||| ||||||| |||||| ||||||||||||| |||||    
T  24932188 cccctataaaattttcggtttgatttgcatcctcgtaaaatatatttttttccgaaaaacacccttaataggccattcaaaaaccaaaatttcttgaa 24932091  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #48
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 4 - 96
Target Start/End: Original strand, 31643988 - 31644081
Alignment:
Q  4 ctattaaattttcggtttgatttgcaccctcgtaaaatttttattttccggtaaacacctttaatagaccattc-aaaaccaaaattttttgaa 96  Q
    |||| ||||||||| ||||||||||||||||||||||  |||||||||||  ||||||| |||||||  ||||| ||||||||||||| |||||    
T  31643988 ctataaaattttcgatttgatttgcaccctcgtaaaaaatttattttccgaaaaacacccttaataggtcattcaaaaaccaaaatttcttgaa 31644081  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #49
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 1 - 76
Target Start/End: Complemental strand, 18318699 - 18318623
Alignment:
Q  1 cccctattaaattttcggtttgatttgcaccctcgtaaaatt-tttattttccggtaaacacctttaatagaccatt 76  Q
    ||||||| |||||||||||||||||||||||||||||||||| ||| |||||||| |||||||  |||||| |||||    
T  18318699 cccctataaaattttcggtttgatttgcaccctcgtaaaattattttttttccggaaaacacccctaataggccatt 18318623  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #50
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 1 - 96
Target Start/End: Complemental strand, 25728426 - 25728330
Alignment:
Q  1 cccctattaaattttcggtttgatttgcaccctcgtaaaatttttattttccggtaaacacctttaatagaccattc-aaaaccaaaattttttgaa 96  Q
    ||||||| ||||||  ||||||||||||||||||||||||  |||||||| ||  ||||||| ||||||| |||||| ||||||||||||| |||||    
T  25728426 cccctataaaatttctggtttgatttgcaccctcgtaaaaaatttatttttcgaaaaacacccttaataggccattcaaaaaccaaaatttcttgaa 25728330  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #51
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 4 - 76
Target Start/End: Original strand, 33582835 - 33582907
Alignment:
Q  4 ctattaaattttcggtttgatttgcaccctcgtaaaatttttattttccggtaaacacctttaatagaccatt 76  Q
    |||| |||||||||||||||||||||||||||||||| ||||||||||||| |||| ||  |||||| |||||    
T  33582835 ctataaaattttcggtttgatttgcaccctcgtaaaaattttattttccggaaaacgcccctaataggccatt 33582907  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #52
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 1 - 76
Target Start/End: Complemental strand, 4098308 - 4098233
Alignment:
Q  1 cccctattaaattttcggtttgatttgcaccctcgtaaaatttttattttccggtaaacacctttaatagaccatt 76  Q
    ||||||| ||||||||||||| ||||||||||||||||||  |||||||||||| |||||||  |||||| |||||    
T  4098308 cccctataaaattttcggtttaatttgcaccctcgtaaaaaatttattttccggaaaacacccctaataggccatt 4098233  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #53
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 1 - 76
Target Start/End: Complemental strand, 16274704 - 16274629
Alignment:
Q  1 cccctattaaattttcggtttgatttgcaccctcgtaaaatttttattttccggtaaacacctttaatagaccatt 76  Q
    ||||||| ||||||| |||||||||||||| ||||||||| ||||||||||||| ||||||| || |||| |||||    
T  16274704 cccctataaaatttttggtttgatttgcactctcgtaaaaattttattttccggaaaacacccttgataggccatt 16274629  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #54
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 1 - 76
Target Start/End: Original strand, 17358054 - 17358129
Alignment:
Q  1 cccctattaaattttcggtttgatttgcaccctcgtaaaatttttattttccggtaaacacctttaatagaccatt 76  Q
    ||||||| ||||||| |||||||||||||||||||| |||||||||||||| || |||||||  |||||| |||||    
T  17358054 cccctataaaatttttggtttgatttgcaccctcgtgaaatttttattttctggaaaacacccctaataggccatt 17358129  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #55
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 3 - 62
Target Start/End: Complemental strand, 46483855 - 46483796
Alignment:
Q  3 cctattaaattttcggtttgatttgcaccctcgtaaaatttttattttccggtaaacacc 62  Q
    ||||| |||||||||||||||||| ||||||||||||||||||||||||| | |||||||    
T  46483855 cctataaaattttcggtttgatttacaccctcgtaaaatttttattttccagaaaacacc 46483796  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #56
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 4 - 62
Target Start/End: Complemental strand, 20033895 - 20033837
Alignment:
Q  4 ctattaaattttcggtttgatttgcaccctcgtaaaatttttattttccggtaaacacc 62  Q
    |||| |||||||||||||||||||||||||||||||| ||||||||||| | |||||||    
T  20033895 ctataaaattttcggtttgatttgcaccctcgtaaaaattttattttccagaaaacacc 20033837  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #57
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 9 - 128
Target Start/End: Original strand, 43989102 - 43989227
Alignment:
Q  9 aaattttcggtttgatttgcaccctcgtaaaatttttattttccggtaaacacctttaatagaccattc-aaaaccaaaattttttgaa-------ctga 100  Q
    ||||||||||||||||||||| ||||||||| | ||  ||||| |  ||||||| ||||||| |||||| |||||||||||||||||||       ||||    
T  43989102 aaattttcggtttgatttgcatcctcgtaaagtatt--ttttcggaaaaacacccttaataggccattcaaaaaccaaaattttttgaaaaaaattctga 43989199  T
Q  101 aaatgacctattaggggtgtttttcgga 128  Q
    ||||| ||||||| ||||||||||||||    
T  43989200 aaatggcctattaagggtgtttttcgga 43989227  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #58
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 4 - 76
Target Start/End: Complemental strand, 14542842 - 14542770
Alignment:
Q  4 ctattaaattttcggtttgatttgcaccctcgtaaaatttttattttccggtaaacacctttaatagaccatt 76  Q
    |||| ||||||||||||||||||| ||||||| |||||||||||||| | | |||||||| |||||| |||||    
T  14542842 ctataaaattttcggtttgatttgaaccctcgcaaaatttttatttttcagaaaacacctctaataggccatt 14542770  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #59
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 3 - 90
Target Start/End: Original strand, 39868518 - 39868606
Alignment:
Q  3 cctattaaattttcggtttgatttgcaccctcgtaaaatttttattttccggtaaacacctttaatagaccattc-aaaaccaaaattt 90  Q
    ||||| |||||||| |||||||||||||||||||||||   ||||||||||  ||| ||| ||||||| |||||| |||||||||||||    
T  39868518 cctataaaattttctgtttgatttgcaccctcgtaaaaaaattattttccgaaaaagacccttaataggccattcaaaaaccaaaattt 39868606  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #60
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 9 - 96
Target Start/End: Complemental strand, 46945134 - 46945046
Alignment:
Q  9 aaattttcggtttgatttgcaccctcgtaaaatttttattttccggtaaacacctttaatagaccatt-caaaaccaaaattttttgaa 96  Q
    ||||||||| ||||||||||||||||||||||  |||||||||||  ||||||| || |||| |||||  ||||||||||||| |||||    
T  46945134 aaattttcgatttgatttgcaccctcgtaaaaaatttattttccgaaaaacaccctttataggccattaaaaaaccaaaatttcttgaa 46945046  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #61
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 9 - 76
Target Start/End: Complemental strand, 30538364 - 30538297
Alignment:
Q  9 aaattttcggtttgatttgcaccctcgtaaaatttttattttccggtaaacacctttaatagaccatt 76  Q
    |||||||| |||||||||||||| |||||||||||||||||| ||| |||||||  |||||| |||||    
T  30538364 aaattttcagtttgatttgcaccatcgtaaaatttttatttttcggaaaacacccctaataggccatt 30538297  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #62
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 3 - 62
Target Start/End: Complemental strand, 49100317 - 49100258
Alignment:
Q  3 cctattaaattttcggtttgatttgcaccctcgtaaaatttttattttccggtaaacacc 62  Q
    ||||| ||||||||||||||||||||| ||| ||||||||||| |||||||| |||||||    
T  49100317 cctataaaattttcggtttgatttgcatccttgtaaaattttttttttccggaaaacacc 49100258  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #63
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 2 - 128
Target Start/End: Original strand, 18318515 - 18318649
Alignment:
Q  2 ccctattaaattttcggtttgatttgcaccctcgtaaaatttttattttccggtaaacacctttaatagaccattc-aaaaccaaaattttttgaa---- 96  Q
    |||||| |||||||  |||||||||||||||||||||  ||||| |||| ||| ||||||| ||||||| |||||| |||||||| |||| |||||        
T  18318515 ccctataaaattttatgtttgatttgcaccctcgtaatttttttctttt-cggaaaacacccttaataggccattcaaaaaccaatatttcttgaaattt 18318613  T
Q  97 ----ctgaaaatgacctattaggggtgtttttcgga 128  Q
        ||||||||| ||||||||||||||||| ||||    
T  18318614 ttttctgaaaatggcctattaggggtgttttccgga 18318649  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #64
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 1 - 62
Target Start/End: Original strand, 11684276 - 11684337
Alignment:
Q  1 cccctattaaattttcggtttgatttgcaccctcgtaaaatttttattttccggtaaacacc 62  Q
    ||||||| ||||||||||||||||||||| ||| |||||| |||| |||||||| |||||||    
T  11684276 cccctataaaattttcggtttgatttgcatccttgtaaaactttttttttccggaaaacacc 11684337  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #65
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 23 - 76
Target Start/End: Complemental strand, 39868682 - 39868629
Alignment:
Q  23 atttgcaccctcgtaaaatttttattttccggtaaacacctttaatagaccatt 76  Q
    |||| ||||||||||||||||||||||||||| |||||||  ||||||||||||    
T  39868682 attttcaccctcgtaaaatttttattttccggaaaacacccctaatagaccatt 39868629  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #66
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 9 - 62
Target Start/End: Original strand, 46944964 - 46945016
Alignment:
Q  9 aaattttcggtttgatttgcaccctcgtaaaatttttattttccggtaaacacc 62  Q
    ||||||||||||||||||||||||| |||||| ||||||||||||| |||||||    
T  46944964 aaattttcggtttgatttgcaccct-gtaaaaattttattttccggaaaacacc 46945016  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #67
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 1 - 76
Target Start/End: Complemental strand, 18449593 - 18449518
Alignment:
Q  1 cccctattaaattttcggtttgatttgcaccctcgtaaaatttttatt-ttccggtaaacacctttaatagaccatt 76  Q
    ||||||| ||||||||||||||||||||||||||||||  ||||| || |||||| |||||||  ||||||||||||    
T  18449593 cccctataaaattttcggtttgatttgcaccctcgtaattttttttttcttccggaaaacacc-ctaatagaccatt 18449518  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #68
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 3 - 51
Target Start/End: Complemental strand, 37101544 - 37101496
Alignment:
Q  3 cctattaaattttcggtttgatttgcaccctcgtaaaatttttattttc 51  Q
    ||||| ||| ||||||||||||||||||| |||||||||||||||||||    
T  37101544 cctataaaactttcggtttgatttgcaccatcgtaaaatttttattttc 37101496  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #69
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 1 - 40
Target Start/End: Original strand, 15984230 - 15984269
Alignment:
Q  1 cccctattaaattttcggtttgatttgcaccctcgtaaaa 40  Q
    ||||||| ||||||||||||||||||||||||||||||||    
T  15984230 cccctataaaattttcggtttgatttgcaccctcgtaaaa 15984269  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #70
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 2 - 80
Target Start/End: Original strand, 30165525 - 30165601
Alignment:
Q  2 ccctattaaattttcggtttgatttgcaccctcgtaaaatttttattttccggtaaacacctttaatagaccattcaaa 80  Q
    |||||| |||||||||||||||||| ||||||||| |||||||   ||||||  ||||||||||||||  |||||||||    
T  30165525 ccctataaaattttcggtttgatttacaccctcgtcaaatttt--atttccgaaaaacacctttaatacgccattcaaa 30165601  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #71
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 9 - 76
Target Start/End: Original strand, 41745147 - 41745214
Alignment:
Q  9 aaattttcggtttgatttgcaccctcgtaaaatttttattttccggtaaacacctttaatagaccatt 76  Q
    ||||||| ||||||||||| |||| |||||||||||||||||  || ||||||| ||||||| |||||    
T  41745147 aaatttttggtttgatttgtacccacgtaaaatttttattttttggaaaacacccttaataggccatt 41745214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #72
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 3 - 40
Target Start/End: Original strand, 3158438 - 3158475
Alignment:
Q  3 cctattaaattttcggtttgatttgcaccctcgtaaaa 40  Q
    ||||| ||||||||||||||||||||||||||||||||    
T  3158438 cctataaaattttcggtttgatttgcaccctcgtaaaa 3158475  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #73
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 1 - 38
Target Start/End: Complemental strand, 15093692 - 15093655
Alignment:
Q  1 cccctattaaattttcggtttgatttgcaccctcgtaa 38  Q
    ||||||| ||||||||||||||||||||||||||||||    
T  15093692 cccctataaaattttcggtttgatttgcaccctcgtaa 15093655  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #74
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 11 - 76
Target Start/End: Original strand, 25677152 - 25677217
Alignment:
Q  11 attttcggtttgatttgcaccctcgtaaaatttttattttccggtaaacacctttaatagaccatt 76  Q
    |||||||||||||||||   |||||||||| ||||||||| ||| ||||||| ||||||| |||||    
T  25677152 attttcggtttgatttgtgtcctcgtaaaaattttatttttcggaaaacacccttaataggccatt 25677217  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #75
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 2 - 39
Target Start/End: Complemental strand, 34116452 - 34116415
Alignment:
Q  2 ccctattaaattttcggtttgatttgcaccctcgtaaa 39  Q
    |||||| |||||||||||||||||||||||||||||||    
T  34116452 ccctataaaattttcggtttgatttgcaccctcgtaaa 34116415  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #76
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 2 - 43
Target Start/End: Original strand, 37536856 - 37536897
Alignment:
Q  2 ccctattaaattttcggtttgatttgcaccctcgtaaaattt 43  Q
    |||||| |||||||||||||||||| ||||||||||||||||    
T  37536856 ccctataaaattttcggtttgattttcaccctcgtaaaattt 37536897  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #77
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 9 - 41
Target Start/End: Original strand, 3687314 - 3687346
Alignment:
Q  9 aaattttcggtttgatttgcaccctcgtaaaat 41  Q
    |||||||||||||||||||||||||||||||||    
T  3687314 aaattttcggtttgatttgcaccctcgtaaaat 3687346  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #78
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 4 - 40
Target Start/End: Complemental strand, 9712626 - 9712590
Alignment:
Q  4 ctattaaattttcggtttgatttgcaccctcgtaaaa 40  Q
    |||| ||||||||||||||||||||||||||||||||    
T  9712626 ctataaaattttcggtttgatttgcaccctcgtaaaa 9712590  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #79
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 1 - 40
Target Start/End: Original strand, 9712452 - 9712491
Alignment:
Q  1 cccctattaaattttcggtttgatttgcaccctcgtaaaa 40  Q
    ||||||| |||||||||||||| |||||||||||||||||    
T  9712452 cccctataaaattttcggtttggtttgcaccctcgtaaaa 9712491  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #80
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 1 - 40
Target Start/End: Original strand, 15129660 - 15129699
Alignment:
Q  1 cccctattaaattttcggtttgatttgcaccctcgtaaaa 40  Q
    ||||||| ||||||||||||||||||||| ||||||||||    
T  15129660 cccctataaaattttcggtttgatttgcatcctcgtaaaa 15129699  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #81
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 1 - 52
Target Start/End: Original strand, 47532834 - 47532885
Alignment:
Q  1 cccctattaaattttcggtttgatttgcaccctcgtaaaatttttattttcc 52  Q
    ||||||| |||||||||||||||||| |||||||||||  ||||| ||||||    
T  47532834 cccctataaaattttcggtttgattttcaccctcgtaattttttttttttcc 47532885  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #82
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 10 - 76
Target Start/End: Original strand, 24438717 - 24438783
Alignment:
Q  10 aattttcggtttgatttgcaccctcgtaaaatttttattttccggtaaacacctttaatagaccatt 76  Q
    ||||||||||||||||||   ||||| ||||  |||||||||||| ||||||| ||||||| |||||    
T  24438717 aattttcggtttgatttgtgtcctcgaaaaaaatttattttccggaaaacacccttaataggccatt 24438783  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #83
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 9 - 39
Target Start/End: Original strand, 39459404 - 39459434
Alignment:
Q  9 aaattttcggtttgatttgcaccctcgtaaa 39  Q
    |||||||||||||||||||||||||||||||    
T  39459404 aaattttcggtttgatttgcaccctcgtaaa 39459434  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #84
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 9 - 62
Target Start/End: Complemental strand, 813645 - 813592
Alignment:
Q  9 aaattttcggtttgatttgcaccctcgtaaaatttttattttccggtaaacacc 62  Q
    ||||||||| ||||||||||| ||| |||||| |||| |||||||| |||||||    
T  813645 aaattttcgatttgatttgcatccttgtaaaactttttttttccggaaaacacc 813592  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #85
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 9 - 62
Target Start/End: Complemental strand, 9556803 - 9556751
Alignment:
Q  9 aaattttcggtttgatttgcaccctcgtaaaatttttattttccggtaaacacc 62  Q
    ||||||| ||||||||||||| ||| ||||||||||| |||||||| |||||||    
T  9556803 aaatttttggtttgatttgcatccttgtaaaattttt-ttttccggaaaacacc 9556751  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #86
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 50
Target Start/End: Complemental strand, 11685271 - 11685222
Alignment:
Q  1 cccctattaaattttcggtttgatttgcaccctcgtaaaatttttatttt 50  Q
    ||||||| ||||||||||||||||||||| ||| |||||| |||| ||||    
T  11685271 cccctataaaattttcggtttgatttgcatccttgtaaaacttttttttt 11685222  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #87
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 38
Target Start/End: Complemental strand, 25677298 - 25677261
Alignment:
Q  1 cccctattaaattttcggtttgatttgcaccctcgtaa 38  Q
    ||||||| ||||||||||||||||||||| ||||||||    
T  25677298 cccctataaaattttcggtttgatttgcatcctcgtaa 25677261  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #88
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 9 - 38
Target Start/End: Complemental strand, 31644167 - 31644138
Alignment:
Q  9 aaattttcggtttgatttgcaccctcgtaa 38  Q
    ||||||||||||||||||||||||||||||    
T  31644167 aaattttcggtttgatttgcaccctcgtaa 31644138  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #89
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 19 - 76
Target Start/End: Original strand, 38651853 - 38651910
Alignment:
Q  19 tttgatttgcaccctcgtaaaatttttattttccggtaaacacctttaatagaccatt 76  Q
    ||||||||||||||| ||||||  |||||||||||| |||||||  |||||| |||||    
T  38651853 tttgatttgcacccttgtaaaaaatttattttccggaaaacacccctaataggccatt 38651910  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #90
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 9 - 38
Target Start/End: Complemental strand, 47533731 - 47533702
Alignment:
Q  9 aaattttcggtttgatttgcaccctcgtaa 38  Q
    ||||||||||||||||||||||||||||||    
T  47533731 aaattttcggtttgatttgcaccctcgtaa 47533702  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #91
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 1 - 45
Target Start/End: Original strand, 9555605 - 9555649
Alignment:
Q  1 cccctattaaattttcggtttgatttgcaccctcgtaaaattttt 45  Q
    ||||||| ||||||||||||||||||||| ||| |||||| ||||    
T  9555605 cccctataaaattttcggtttgatttgcatccttgtaaaactttt 9555649  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #92
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 4 - 40
Target Start/End: Complemental strand, 15129842 - 15129806
Alignment:
Q  4 ctattaaattttcggtttgatttgcaccctcgtaaaa 40  Q
    |||| ||||||||||||||||||||| ||||||||||    
T  15129842 ctataaaattttcggtttgatttgcatcctcgtaaaa 15129806  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #93
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 4 - 40
Target Start/End: Complemental strand, 18024843 - 18024807
Alignment:
Q  4 ctattaaattttcggtttgatttgcaccctcgtaaaa 40  Q
    |||| ||||||||||||||||||||| ||||||||||    
T  18024843 ctataaaattttcggtttgatttgcatcctcgtaaaa 18024807  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #94
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 4 - 40
Target Start/End: Complemental strand, 24438890 - 24438854
Alignment:
Q  4 ctattaaattttcggtttgatttgcaccctcgtaaaa 40  Q
    |||| ||||||||||||||||||||| ||||||||||    
T  24438890 ctataaaattttcggtttgatttgcatcctcgtaaaa 24438854  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #95
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 1 - 62
Target Start/End: Complemental strand, 42042904 - 42042841
Alignment:
Q  1 cccctattaaattttcggtttgatttgcaccctcgtaaaa--tttttattttccggtaaacacc 62  Q
    ||||||| ||||||||||||||| ||||| ||| ||||||  ||||| |||||||| |||||||    
T  42042904 cccctataaaattttcggtttgaattgcatccttgtaaaactttttttttttccggaaaacacc 42042841  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0744 (Bit Score: 69; Significance: 6e-31; HSPs: 2)
Name: scaffold0744
Description:

Target: scaffold0744; HSP #1
Raw Score: 69; E-Value: 6e-31
Query Start/End: Original strand, 1 - 96
Target Start/End: Original strand, 1353 - 1449
Alignment:
Q  1 cccctattaaattttcggtttgatttgcaccctcgtaaaatttttattttccggtaaacacctttaatagaccattc-aaaaccaaaattttttgaa 96  Q
    ||||||| |||||||||||||||||||||||||||||||||||||||||||||| ||||||| ||||||| |||||| ||||||||||||| |||||    
T  1353 cccctataaaattttcggtttgatttgcaccctcgtaaaatttttattttccggaaaacacccttaataggccattcaaaaaccaaaatttcttgaa 1449  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0744; HSP #2
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 1 - 50
Target Start/End: Complemental strand, 1506 - 1457
Alignment:
Q  1 cccctattaaattttcggtttgatttgcaccctcgtaaaatttttatttt 50  Q
    ||||||| ||||||||||||||||||||||||||||||||  ||||||||    
T  1506 cccctataaaattttcggtttgatttgcaccctcgtaaaaaatttatttt 1457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 69; Significance: 6e-31; HSPs: 84)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 69; E-Value: 6e-31
Query Start/End: Original strand, 1 - 96
Target Start/End: Original strand, 19203638 - 19203734
Alignment:
Q  1 cccctattaaattttcggtttgatttgcaccctcgtaaaatttttattttccggtaaacacctttaatagaccattc-aaaaccaaaattttttgaa 96  Q
    |||||||||||||||||||||||||| ||||||||||||||||||||||||||| ||||||| ||||||| |||||| ||||||||||||| |||||    
T  19203638 cccctattaaattttcggtttgattttcaccctcgtaaaatttttattttccggaaaacacccttaataggccattcaaaaaccaaaatttcttgaa 19203734  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 2 - 93
Target Start/End: Complemental strand, 28755319 - 28755228
Alignment:
Q  2 ccctattaaattttcggtttgatttgcaccctcgtaaaatttttattttccggtaaacacctttaatagaccattcaaaaccaaaatttttt 93  Q
    |||||| |||||||||||||||||||||||||||||||||||||||||||||| ||||||| ||||||| |||||||||| | |||||||||    
T  28755319 ccctataaaattttcggtttgatttgcaccctcgtaaaatttttattttccggaaaacacccttaataggccattcaaaaactaaatttttt 28755228  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 1 - 96
Target Start/End: Complemental strand, 8401440 - 8401344
Alignment:
Q  1 cccctattaaattttcggtttgatttgcaccctcgtaaaatttttattttccggtaaacacctttaatagaccatt-caaaaccaaaattttttgaa 96  Q
    ||||||| |||||||||||||||||||||||||||||||||||||||||||||| ||||||| ||||||| |||||  ||||||||||||| |||||    
T  8401440 cccctataaaattttcggtttgatttgcaccctcgtaaaatttttattttccggaaaacacccttaataggccattaaaaaaccaaaatttcttgaa 8401344  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 4 - 128
Target Start/End: Complemental strand, 9663436 - 9663303
Alignment:
Q  4 ctattaaattttcggtttgatttgcaccctcgtaaaatttttattttccggtaaacacctttaatagaccattc-aaaaccaaaattttttgaa------ 96  Q
    |||| |||||||||||||||||||||||||||||||||||||||||||||| ||||| | ||||||| |||||| ||||||||||||| |||||          
T  9663436 ctataaaattttcggtttgatttgcaccctcgtaaaatttttattttccggaaaacatccttaataggccattcaaaaaccaaaatttcttgaaaaaaaa 9663337  T
Q  97 --ctgaaaatgacctattaggggtgtttttcgga 128  Q
      ||||||||| ||||||| ||||||||||||||    
T  9663336 ttctgaaaatggcctattacgggtgtttttcgga 9663303  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 4 - 128
Target Start/End: Complemental strand, 19495643 - 19495510
Alignment:
Q  4 ctattaaattttcggtttgatttgcaccctcgtaaaatttttattttccggtaaacacctttaatagaccattc-aaaaccaaaattttttgaa------ 96  Q
    |||| |||||||||||||||||| ||||||||||||||||||||||||||| ||||||| ||||||| |||||| ||||||||||||| |||||          
T  19495643 ctataaaattttcggtttgattttcaccctcgtaaaatttttattttccggaaaacacccttaataggccattcaaaaaccaaaatttcttgaaaaaaaa 19495544  T
Q  97 --ctgaaaatgacctattaggggtgtttttcgga 128  Q
      ||||||||| ||||||||||||||||| ||||    
T  19495543 ttctgaaaatggcctattaggggtgttttccgga 19495510  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 1 - 96
Target Start/End: Original strand, 47465227 - 47465323
Alignment:
Q  1 cccctattaaattttcggtttgatttgcaccctcgtaaaatttttattttccggtaaacacctttaatagaccattc-aaaaccaaaattttttgaa 96  Q
    ||||||| |||||||||||||||||||||||||||||||| ||||||||||||| ||||||| ||||||| |||||| ||||||||||||| |||||    
T  47465227 cccctataaaattttcggtttgatttgcaccctcgtaaaaattttattttccggaaaacacccttaataggccattcaaaaaccaaaatttcttgaa 47465323  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 64; E-Value: 6e-28
Query Start/End: Original strand, 1 - 128
Target Start/End: Original strand, 27487558 - 27487694
Alignment:
Q  1 cccctattaaattttcggtttgatttgcaccctcgtaaaatttttattttccggtaaacacctttaatagaccattc-aaaaccaaaattttttgaa--- 96  Q
    ||||||| |||||||||||||||||| ||||||| ||||||||||||||||||| ||||||| ||||||| |||| | ||||||||||||| |||||       
T  27487558 cccctataaaattttcggtttgattttcaccctcataaaatttttattttccggaaaacacccttaataggccatccaaaaaccaaaatttcttgaaaaa 27487657  T
Q  97 -----ctgaaaatgacctattaggggtgtttttcgga 128  Q
         ||||||||| ||||||||||||||||||||||    
T  27487658 tttttctgaaaatggcctattaggggtgtttttcgga 27487694  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 1 - 123
Target Start/End: Original strand, 4758501 - 4758632
Alignment:
Q  1 cccctattaaattttcggtttgatttgcaccctcgtaaaatttttattttccggtaaacacctttaatagaccattc-aaaaccaaaattttttgaa--- 96  Q
    ||||||| |||||||||||||||||||||||||||||||||||||||||| ||| ||||||| ||||||  |||||| ||||||||||||| |||||       
T  4758501 cccctataaaattttcggtttgatttgcaccctcgtaaaatttttatttttcggaaaacacccttaataagccattcaaaaaccaaaatttcttgaaaaa 4758600  T
Q  97 -----ctgaaaatgacctattaggggtgtttt 123  Q
         ||||||||| |||||||||||||||||    
T  4758601 aaattctgaaaatggcctattaggggtgtttt 4758632  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 3 - 96
Target Start/End: Complemental strand, 40269787 - 40269693
Alignment:
Q  3 cctattaaattttcggtttgatttgcaccctcgtaaaatttttattttccggtaaacacctttaatagaccattc-aaaaccaaaattttttgaa 96  Q
    ||||| |||||||||||||||||||| ||||| ||||||||||||||||||| ||||||||||||||| |||||| ||||||||||||| |||||    
T  40269787 cctataaaattttcggtttgatttgcgccctcttaaaatttttattttccggaaaacacctttaataggccattcaaaaaccaaaatttcttgaa 40269693  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 9 - 128
Target Start/End: Original strand, 17697212 - 17697341
Alignment:
Q  9 aaattttcggtttgatttgcaccctcgtaaaatttttattttccggtaaacacctttaatagaccattc-aaaaccaaaattttttgaa---------ct 98  Q
    |||||||||||||||||||||||||||||||| ||||||||||||| ||||||| ||||||| |||||| ||||||||||||| |||||         ||    
T  17697212 aaattttcggtttgatttgcaccctcgtaaaaattttattttccggaaaacacccttaataggccattcaaaaaccaaaatttcttgaaaaaaagattct 17697311  T
Q  99 gaaaatgacctattaggggtgtttttcgga 128  Q
    ||||||| ||||||||||||||||| ||||    
T  17697312 gaaaatggcctattaggggtgttttccgga 17697341  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 9 - 96
Target Start/End: Complemental strand, 6458150 - 6458062
Alignment:
Q  9 aaattttcggtttgatttgcaccctcgtaaaatttttattttccggtaaacacctttaatagaccattc-aaaaccaaaattttttgaa 96  Q
    |||||||||||||||||| ||||||||||||||||||||||||| | ||||||| ||||||| |||||| |||||||||||||||||||    
T  6458150 aaattttcggtttgattttcaccctcgtaaaatttttattttcctgaaaacacccttaataggccattcaaaaaccaaaattttttgaa 6458062  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 1 - 96
Target Start/End: Original strand, 49236376 - 49236472
Alignment:
Q  1 cccctattaaattttcggtttgatttgcaccctcgtaaaatttttattttccggtaaacacctttaatagaccattc-aaaaccaaaattttttgaa 96  Q
    ||||||| |||||||||||||||||||||||||||||||| ||||||||||||| ||||||| |||||||  ||||| ||||||||||||| |||||    
T  49236376 cccctataaaattttcggtttgatttgcaccctcgtaaaaattttattttccggaaaacacccttaataggtcattcaaaaaccaaaatttcttgaa 49236472  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 9 - 96
Target Start/End: Complemental strand, 49633163 - 49633075
Alignment:
Q  9 aaattttcggtttgatttgcaccctcgtaaaatttttattttccggtaaacacctttaatagaccattc-aaaaccaaaattttttgaa 96  Q
    ||||||||||||||||||||||||||||||||||||||||||  || ||||||||||||||| |||||| ||||||||||||| |||||    
T  49633163 aaattttcggtttgatttgcaccctcgtaaaatttttattttttggaaaacacctttaataggccattcaaaaaccaaaatttcttgaa 49633075  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 1 - 128
Target Start/End: Complemental strand, 13169017 - 13168883
Alignment:
Q  1 cccctattaaattttcggtttgatttgcaccctcgtaaaatttttattttccggtaaacacctttaatagaccattc-aaaaccaaaattttttgaa--- 96  Q
    ||||||| |||||||||||||||||| |||||||||||||  |||||||||||| ||||||| ||||||| |||||| ||||||||||||| |||||       
T  13169017 cccctataaaattttcggtttgatttacaccctcgtaaaaaatttattttccggaaaacacccttaataggccattcaaaaaccaaaatttcttgaaaaa 13168918  T
Q  97 ---ctgaaaatgacctattaggggtgtttttcgga 128  Q
       ||||||||| ||||||| ||||||||| ||||    
T  13168917 attctgaaaatggcctattaagggtgttttccgga 13168883  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 59; E-Value: 6e-25
Query Start/End: Original strand, 1 - 123
Target Start/End: Complemental strand, 19042269 - 19042138
Alignment:
Q  1 cccctattaaattttcggtttgatttgcaccctcgtaaaatttttattttccggtaaacacctttaatagaccattc-aaaaccaaaattttttgaa--- 96  Q
    ||||||| ||||||| |||||||||||||||||||||||| |||||||||| || ||||||| ||||||| |||||| ||||||||||||| |||||       
T  19042269 cccctataaaatttttggtttgatttgcaccctcgtaaaaattttattttctggaaaacacccttaataggccattcaaaaaccaaaatttcttgaaaaa 19042170  T
Q  97 -----ctgaaaatgacctattaggggtgtttt 123  Q
         ||||||||| |||||||||||||||||    
T  19042169 aaattctgaaaatggcctattaggggtgtttt 19042138  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 4 - 96
Target Start/End: Original strand, 18638186 - 18638279
Alignment:
Q  4 ctattaaattttcggtttgatttgcaccctcgtaaaatttttattttccggtaaacacctttaatagaccattc-aaaaccaaaattttttgaa 96  Q
    |||| |||||||| ||||||||| ||||||||||||||||||||||| ||| ||||||| |||||||||||||| ||||||||||||| |||||    
T  18638186 ctataaaattttcagtttgattttcaccctcgtaaaatttttatttttcggaaaacacccttaatagaccattcaaaaaccaaaatttcttgaa 18638279  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 57; E-Value: 9e-24
Query Start/End: Original strand, 1 - 123
Target Start/End: Complemental strand, 54442218 - 54442088
Alignment:
Q  1 cccctattaaattttcggtttgatttgcaccctcgtaaaatttttattttccggtaaacacctttaatagaccattc-aaaaccaaaattttttgaa--- 96  Q
    ||||||| ||||||||||||||||| |||||||||||||| ||||||||||| | ||||||  ||||||| |||||| ||||||||||||| |||||       
T  54442218 cccctataaaattttcggtttgattggcaccctcgtaaaaattttattttccagaaaacactcttaataggccattcaaaaaccaaaatttcttgaaaaa 54442119  T
Q  97 ----ctgaaaatgacctattaggggtgtttt 123  Q
        ||||||||| |||||||||||||||||    
T  54442118 aattctgaaaatggcctattaggggtgtttt 54442088  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 1 - 123
Target Start/End: Complemental strand, 11347452 - 11347321
Alignment:
Q  1 cccctattaaattttcggtttgatttgcaccctcgtaaaatttttattttccggtaaacacctttaatagaccattc-aaaaccaaaattttttgaa--- 96  Q
    ||||||| |||||||||||||||||||||||| | ||||| ||||||||| ||| ||||||| ||||||| |||||| ||||||||||||| |||||       
T  11347452 cccctataaaattttcggtttgatttgcacccacataaaaattttatttttcggaaaacacccttaataggccattcaaaaaccaaaatttcttgaaaaa 11347353  T
Q  97 -----ctgaaaatgacctattaggggtgtttt 123  Q
          ||||||||||||||||||||||||||    
T  11347352 aaattatgaaaatgacctattaggggtgtttt 11347321  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 1 - 128
Target Start/End: Complemental strand, 15323665 - 15323528
Alignment:
Q  1 cccctattaaattttcggtttgatttgcaccctcgtaaaatttttattttccggtaaacacctttaatagaccattc-aaaaccaaaattttttgaa--- 96  Q
    ||||||| |||||||| |||||||||| |||||||||||| ||||||||||||| ||||| | ||||||| |||||| ||||||||||||| |||||       
T  15323665 cccctataaaattttcagtttgatttgtaccctcgtaaaaattttattttccggaaaacaaccttaataggccattcaaaaaccaaaatttcttgaaaaa 15323566  T
Q  97 ------ctgaaaatgacctattaggggtgtttttcgga 128  Q
          ||||||||| ||||||||||||||||| ||||    
T  15323565 aaaaatctgaaaatggcctattaggggtgttttccgga 15323528  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 4 - 81
Target Start/End: Complemental strand, 21822695 - 21822618
Alignment:
Q  4 ctattaaattttcggtttgatttgcaccctcgtaaaatttttattttccggtaaacacctttaatagaccattcaaaa 81  Q
    |||| ||||||||||||||||||||||||||||||||  |||||||||||| ||||||| ||||||| ||||||||||    
T  21822695 ctataaaattttcggtttgatttgcaccctcgtaaaaaatttattttccggaaaacacccttaataggccattcaaaa 21822618  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 9 - 96
Target Start/End: Original strand, 6378430 - 6378518
Alignment:
Q  9 aaattttcggtttgatttgcaccctcgtaaaatttttattttccggtaaacacctttaatagaccattc-aaaaccaaaattttttgaa 96  Q
    ||||||||||||||||||||||||||||||||||||||||||| || ||||||| |||  || |||||| ||||||||||||| |||||    
T  6378430 aaattttcggtttgatttgcaccctcgtaaaatttttattttctggaaaacacccttacgaggccattcaaaaaccaaaatttcttgaa 6378518  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 1 - 61
Target Start/End: Original strand, 8401255 - 8401315
Alignment:
Q  1 cccctattaaattttcggtttgatttgcaccctcgtaaaatttttattttccggtaaacac 61  Q
    ||||||| |||||||||||||||||||||||||||||||||||||||||||||| ||||||    
T  8401255 cccctataaaattttcggtttgatttgcaccctcgtaaaatttttattttccggaaaacac 8401315  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 1 - 96
Target Start/End: Original strand, 49249468 - 49249564
Alignment:
Q  1 cccctattaaattttcggtttgatttgcaccctcgtaaaatttttattttccggtaaacacctttaatagaccattc-aaaaccaaaattttttgaa 96  Q
    ||||||| |||||||||||||||||| |||| |||||||||||||||||| ||| |||| || ||||||| |||||| ||||||||||||| |||||    
T  49249468 cccctataaaattttcggtttgatttacaccatcgtaaaatttttatttttcggaaaacgcccttaataggccattcaaaaaccaaaatttcttgaa 49249564  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 1 - 76
Target Start/End: Original strand, 15323479 - 15323554
Alignment:
Q  1 cccctattaaattttcggtttgatttgcaccctcgtaaaatttttattttccggtaaacacctttaatagaccatt 76  Q
    ||||||| ||||| |||||||||||||||||||||||||||||||||||||||| |||||||  |||||| |||||    
T  15323479 cccctataaaattctcggtttgatttgcaccctcgtaaaatttttattttccggaaaacacccctaataggccatt 15323554  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 9 - 76
Target Start/End: Complemental strand, 17697382 - 17697315
Alignment:
Q  9 aaattttcggtttgatttgcaccctcgtaaaatttttattttccggtaaacacctttaatagaccatt 76  Q
    |||||||||||||||||||||||||||||||||||||||||||||| |||||||  |||||| |||||    
T  17697382 aaattttcggtttgatttgcaccctcgtaaaatttttattttccggaaaacacccctaataggccatt 17697315  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 2 - 61
Target Start/End: Complemental strand, 18638367 - 18638308
Alignment:
Q  2 ccctattaaattttcggtttgatttgcaccctcgtaaaatttttattttccggtaaacac 61  Q
    |||||| |||||||||||||||||||||||||||||||||||||||||||||| ||||||    
T  18638367 ccctataaaattttcggtttgatttgcaccctcgtaaaatttttattttccggaaaacac 18638308  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 1 - 76
Target Start/End: Complemental strand, 20570136 - 20570061
Alignment:
Q  1 cccctattaaattttcggtttgatttgcaccctcgtaaaatttttattttccggtaaacacctttaatagaccatt 76  Q
    ||||||| ||||||||||||||||||||||||| |||||||||||||||||||| |||||||  |||||| |||||    
T  20570136 cccctataaaattttcggtttgatttgcacccttgtaaaatttttattttccggaaaacacccctaataggccatt 20570061  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 2 - 96
Target Start/End: Original strand, 45617512 - 45617607
Alignment:
Q  2 ccctattaaattttcggtttgatttgcaccctcgtaaaatttttattttccggtaaacacctttaatagaccattc-aaaaccaaaattttttgaa 96  Q
    |||||| ||||||||| ||||||||| |||||||||||||||||||||| ||| ||||| | ||||||| |||||| ||||||||||||| |||||    
T  45617512 ccctataaaattttcgatttgatttgtaccctcgtaaaatttttatttttcggaaaacagccttaataggccattcaaaaaccaaaatttcttgaa 45617607  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 1 - 123
Target Start/End: Complemental strand, 32630 - 32499
Alignment:
Q  1 cccctattaaattttcggtttgatttgcaccctcgtaaaatttttattttccggtaaacacctttaatagaccattc-aaaaccaaaattttttgaa--- 96  Q
    ||||||| |||||||||||||||||||||||||| |||||  |||||||||||  ||||||| ||||||| | |||| ||||||||||||| |||||       
T  32630 cccctataaaattttcggtttgatttgcaccctcataaaaaatttattttccgaaaaacacccttaataggctattcaaaaaccaaaatttcttgaaaca 32531  T
Q  97 -----ctgaaaatgacctattaggggtgtttt 123  Q
         ||||||||| |||||||||||||||||    
T  32530 aaaatctgaaaatggcctattaggggtgtttt 32499  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 1 - 123
Target Start/End: Complemental strand, 19291581 - 19291450
Alignment:
Q  1 cccctattaaattttcggtttgatttgcaccctcgtaaaatttttattttccggtaaacacctttaatagaccattc-aaaaccaaaattttttgaa--- 96  Q
    ||||||| ||||||||||||||||||||||||||||||||||| | |||  | | ||||||| ||||||| |||||| ||||||||||||| |||||       
T  19291581 cccctataaaattttcggtttgatttgcaccctcgtaaaatttgtttttctctgaaaacacccttaataggccattcaaaaaccaaaatttcttgaaaaa 19291482  T
Q  97 -----ctgaaaatgacctattaggggtgtttt 123  Q
         ||||||||| |||||||||||||||||    
T  19291481 aaaatctgaaaatggcctattaggggtgtttt 19291450  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 9 - 90
Target Start/End: Original strand, 20569957 - 20570039
Alignment:
Q  9 aaattttcggtttgatttgcaccctcgtaaaatttttattttccggtaaacacctttaatagaccattc-aaaaccaaaattt 90  Q
    |||||||| ||||||||| ||||||||||||||||||||||| ||| ||||||| ||||||| |||||| |||||||||||||    
T  20569957 aaattttcagtttgattttcaccctcgtaaaatttttatttttcggaaaacacccttaataggccattcaaaaaccaaaattt 20570039  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 4 - 76
Target Start/End: Original strand, 19495464 - 19495536
Alignment:
Q  4 ctattaaattttcggtttgatttgcaccctcgtaaaatttttattttccggtaaacacctttaatagaccatt 76  Q
    |||| ||||||||||||||||||||||||| |||||||||||||||||||| |||||||  |||||| |||||    
T  19495464 ctataaaattttcggtttgatttgcacccttgtaaaatttttattttccggaaaacacccctaataggccatt 19495536  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 9 - 76
Target Start/End: Complemental strand, 6810697 - 6810630
Alignment:
Q  9 aaattttcggtttgatttgcaccctcgtaaaatttttattttccggtaaacacctttaatagaccatt 76  Q
    |||||||||||||||||||||||||||||||| ||||||||||||  ||||||| ||||||| |||||    
T  6810697 aaattttcggtttgatttgcaccctcgtaaaaattttattttccgaaaaacacccttaataggccatt 6810630  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 9 - 76
Target Start/End: Original strand, 13168842 - 13168909
Alignment:
Q  9 aaattttcggtttgatttgcaccctcgtaaaatttttattttccggtaaacacctttaatagaccatt 76  Q
    ||||||||||||||||||||||||||||||||  |||||||||||| ||||||| ||||||| |||||    
T  13168842 aaattttcggtttgatttgcaccctcgtaaaaaatttattttccggaaaacacccttaataggccatt 13168909  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 1 - 76
Target Start/End: Complemental strand, 47465412 - 47465337
Alignment:
Q  1 cccctattaaattttcggtttgatttgcaccctcgtaaaatttttattttccggtaaacacctttaatagaccatt 76  Q
    ||||||| |||||||||||||||||||||||||||||||| |||||||||| |  ||||||| ||||||| |||||    
T  47465412 cccctataaaattttcggtttgatttgcaccctcgtaaaaattttattttctgaaaaacacccttaataggccatt 47465337  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 1 - 76
Target Start/End: Original strand, 54442034 - 54442109
Alignment:
Q  1 cccctattaaattttcggtttgatttgcaccctcgtaaaatttttattttccggtaaacacctttaatagaccatt 76  Q
    ||||||| |||||||| |||||||||||||||||||||||||||||||||| || |||||||  |||||| |||||    
T  54442034 cccctataaaattttcagtttgatttgcaccctcgtaaaatttttattttctggaaaacacccctaataggccatt 54442109  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 3 - 52
Target Start/End: Original strand, 9150774 - 9150823
Alignment:
Q  3 cctattaaattttcggtttgatttgcaccctcgtaaaatttttattttcc 52  Q
    ||||| ||||||||||||||||||||||||||||||||||||||||||||    
T  9150774 cctataaaattttcggtttgatttgcaccctcgtaaaatttttattttcc 9150823  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 9 - 128
Target Start/End: Complemental strand, 36498438 - 36498306
Alignment:
Q  9 aaattttcggtttgatttgcaccctcgtaaaatttttattttccggtaaaca-cct---ttaatagaccattc-aaaaccaaaattttttgaa------- 96  Q
    ||||||||||||||||||||||||||||||||  |||||||||||| ||||| |||   ||||||| |||||| ||||||||||||| |||||           
T  36498438 aaattttcggtttgatttgcaccctcgtaaaaaatttattttccggaaaacatccttaattaataggccattcaaaaaccaaaatttcttgaaaaaaaat 36498339  T
Q  97 -ctgaaaatgacctattaggggtgtttttcgga 128  Q
     ||||||||| ||||||||||||||||| ||||    
T  36498338 tctgaaaatggcctattaggggtgttttccgga 36498306  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 2 - 128
Target Start/End: Original strand, 10264449 - 10264583
Alignment:
Q  2 ccctattaaattttcggtttgatttgcaccctcgtaaaatttttattttccggtaaacacctttaatagaccattc-aaaaccaaaattttttgaa---- 96  Q
    |||||| |||||||  |||| ||||  |||||||||||||||||||||||||| ||| ||| ||||||| |||||| ||||||||||||| |||||        
T  10264449 ccctataaaatttttagttttattttaaccctcgtaaaatttttattttccggaaaagacccttaataggccattcaaaaaccaaaatttcttgaaaaaa 10264548  T
Q  97 ---ctgaaaatgacctattaggggtgtttttcgga 128  Q
       ||||||||| |||||||||||| |||| ||||    
T  10264549 attctgaaaatggcctattaggggtcttttccgga 10264583  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 9 - 81
Target Start/End: Original strand, 18909616 - 18909688
Alignment:
Q  9 aaattttcggtttgatttgcaccctcgtaaaatttttattttccggtaaacacctttaatagaccattcaaaa 81  Q
    ||||||||||||||||||||||| |||||||||||||||||| ||  ||||| | ||||||| ||||||||||    
T  18909616 aaattttcggtttgatttgcaccatcgtaaaatttttatttttcgaaaaacatccttaataggccattcaaaa 18909688  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 1 - 53
Target Start/End: Complemental strand, 19203823 - 19203771
Alignment:
Q  1 cccctattaaattttcggtttgatttgcaccctcgtaaaatttttattttccg 53  Q
    ||||||| |||||||||||||||||||||||||||||||| ||||||||||||    
T  19203823 cccctataaaattttcggtttgatttgcaccctcgtaaaaattttattttccg 19203771  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 2 - 96
Target Start/End: Original strand, 12294414 - 12294508
Alignment:
Q  2 ccctattaaattttcggtttgatttgcaccctcgtaaaatttttattttccggtaaacacctttaatagaccattc-aaaaccaaaattttttgaa 96  Q
    |||||| ||||||| ||||||||||||| |||||||||| ||||||||| ||| ||||| | ||||||| |||||| ||||||||||||| |||||    
T  12294414 ccctataaaatttttggtttgatttgca-cctcgtaaaaattttatttttcggaaaacatccttaataggccattcaaaaaccaaaatttcttgaa 12294508  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 1 - 63
Target Start/End: Original strand, 39534113 - 39534175
Alignment:
Q  1 cccctattaaattttcggtttgatttgcaccctcgtaaaatttttattttccggtaaacacct 63  Q
    ||||||| |||||||| |||||||||| |||||||||||||||||||||||| | ||||||||    
T  39534113 cccctataaaattttcagtttgatttgtaccctcgtaaaatttttattttccagaaaacacct 39534175  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 1 - 62
Target Start/End: Original strand, 11347267 - 11347328
Alignment:
Q  1 cccctattaaattttcggtttgatttgcaccctcgtaaaatttttattttccggtaaacacc 62  Q
    ||||||| ||| ||| |||||||||||||||||||||||||||||||||| ||| |||||||    
T  11347267 cccctataaaaattttggtttgatttgcaccctcgtaaaatttttatttttcggaaaacacc 11347328  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 3 - 76
Target Start/End: Complemental strand, 19675842 - 19675769
Alignment:
Q  3 cctattaaattttcggtttgatttgcaccctcgtaaaatttttattttccggtaaacacctttaatagaccatt 76  Q
    ||||| ||||||||||||||||||||||||| ||||||| ||| |||||||| |||||||  |||||| |||||    
T  19675842 cctataaaattttcggtttgatttgcacccttgtaaaatattttttttccggaaaacacccctaataggccatt 19675769  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 12 - 96
Target Start/End: Original strand, 38095097 - 38095182
Alignment:
Q  12 ttttcggtttgatttgcaccctcgtaaaatttttattttccggtaaacacctttaatagaccattc-aaaaccaaaattttttgaa 96  Q
    ||||||||||||||||||| || ||| |||||||||||| ||  |||||||||||||||  ||||| ||||||||||||| |||||    
T  38095097 ttttcggtttgatttgcactcttgtacaatttttatttttcgaaaaacacctttaataggtcattcaaaaaccaaaatttcttgaa 38095182  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 1 - 62
Target Start/End: Original strand, 49632971 - 49633032
Alignment:
Q  1 cccctattaaattttcggtttgatttgcaccctcgtaaaatttttattttccggtaaacacc 62  Q
    |||||||||||||||||||||||||||| |||||||||||   ||||||||||| |||||||    
T  49632971 cccctattaaattttcggtttgatttgctccctcgtaaaaaaattattttccggaaaacacc 49633032  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 24 - 128
Target Start/End: Original strand, 6810543 - 6810656
Alignment:
Q  24 tttgcaccctcgtaaaatttttattttccggtaaacacctttaatagacca-ttcaaaaccaaaattttttgaa--------ctgaaaatgacctattag 114  Q
    ||||||||||||||||||||||||||||||| ||||||| |||| |  ||| || ||||||||||||| |||||        ||||||||| |||||||     
T  6810543 tttgcaccctcgtaaaatttttattttccggaaaacacccttaacatgccatttaaaaaccaaaatttcttgaaaaaaaattctgaaaatggcctattaa 6810642  T
Q  115 gggtgtttttcgga 128  Q
    ||||||||||||||    
T  6810643 gggtgtttttcgga 6810656  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 9 - 96
Target Start/End: Complemental strand, 22324667 - 22324580
Alignment:
Q  9 aaattttcggtttgatttgcaccctcgtaaaatttttattttccggtaaacacctttaatagaccattc-aaaaccaaaattttttgaa 96  Q
    ||||||| |||||||||||||||||||| || |||||  ||||||| ||||||| ||||||| |||||| ||||||||||||| |||||    
T  22324667 aaatttttggtttgatttgcaccctcgt-aatttttttctttccggaaaacacccttaataggccattcaaaaaccaaaatttcttgaa 22324580  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 12 - 76
Target Start/End: Complemental strand, 27487732 - 27487668
Alignment:
Q  12 ttttcggtttgatttgcaccctcgtaaaatttttattttccggtaaacacctttaatagaccatt 76  Q
    |||||||||||||||||||| |||||||||||||||||||||  |||||||  |||||| |||||    
T  27487732 ttttcggtttgatttgcaccatcgtaaaatttttattttccgaaaaacacccctaataggccatt 27487668  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 4 - 76
Target Start/End: Original strand, 28755138 - 28755210
Alignment:
Q  4 ctattaaattttcggtttgatttgcaccctcgtaaaatttttattttccggtaaacacctttaatagaccatt 76  Q
    |||| |||||||| |||||||||| |||||||||||||||||||||||||  |||||| | |||||| |||||    
T  28755138 ctataaaattttctgtttgatttggaccctcgtaaaatttttattttccgtaaaacacatctaataggccatt 28755210  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #52
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 1 - 61
Target Start/End: Complemental strand, 47283617 - 47283557
Alignment:
Q  1 cccctattaaattttcggtttgatttgcaccctcgtaaaatttttattttccggtaaacac 61  Q
    |||||||||||||||| |||||||||||||||||||||| ||||| | |||||| ||||||    
T  47283617 cccctattaaattttcagtttgatttgcaccctcgtaaattttttttcttccggaaaacac 47283557  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #53
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 1 - 76
Target Start/End: Complemental strand, 4758686 - 4758611
Alignment:
Q  1 cccctattaaattttcggtttgatttgcaccctcgtaaaatttttattttccggtaaacacctttaatagaccatt 76  Q
    ||||||| ||||||||| |||||||||| ||||||||||| ||||||||||| | |||||||  |||||| |||||    
T  4758686 cccctataaaattttcgatttgatttgcgccctcgtaaaaattttattttccagaaaacacccctaataggccatt 4758611  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #54
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 1 - 76
Target Start/End: Original strand, 15977336 - 15977411
Alignment:
Q  1 cccctattaaattttcggtttgatttgcaccctcgtaaaatttttattttccggtaaacacctttaatagaccatt 76  Q
    ||||||| ||||||| |||||||||||   |||||||||||| ||||||||||| ||||||| ||||||| |||||    
T  15977336 cccctataaaatttttggtttgatttgtgtcctcgtaaaattgttattttccggaaaacacccttaataggccatt 15977411  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #55
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 1 - 76
Target Start/End: Original strand, 36498257 - 36498332
Alignment:
Q  1 cccctattaaattttcggtttgatttgcaccctcgtaaaatttttattttccggtaaacacctttaatagaccatt 76  Q
    ||||||| |||||||  ||||||||| ||||||||||||| ||||||||||||| |||||||  |||||| |||||    
T  36498257 cccctataaaatttttagtttgatttacaccctcgtaaaaattttattttccggaaaacacccctaataggccatt 36498332  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #56
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 11 - 96
Target Start/End: Complemental strand, 23573387 - 23573301
Alignment:
Q  11 attttcggtttgatttgcaccctcgtaaaatttttattttccggtaaacacctttaatagaccattc-aaaaccaaaattttttgaa 96  Q
    |||||||||||||||||||   |||||||||||||||||||||  |||||   ||||||| |||||| ||||||||||||| |||||    
T  23573387 attttcggtttgatttgcatattcgtaaaatttttattttccgaaaaacattcttaataggccattcaaaaaccaaaatttcttgaa 23573301  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #57
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 11 - 52
Target Start/End: Complemental strand, 45617684 - 45617643
Alignment:
Q  11 attttcggtttgatttgcaccctcgtaaaatttttattttcc 52  Q
    |||||||||||||||||||||||||||||| |||||||||||    
T  45617684 attttcggtttgatttgcaccctcgtaaaaattttattttcc 45617643  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #58
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 1 - 53
Target Start/End: Original strand, 43071064 - 43071116
Alignment:
Q  1 cccctattaaattttcggtttgatttgcaccctcgtaaaatttttattttccg 53  Q
    ||||||| |||||||||||||| ||||| ||||||||||| ||||||||||||    
T  43071064 cccctataaaattttcggtttgttttgcgccctcgtaaaaattttattttccg 43071116  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #59
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 1 - 40
Target Start/End: Complemental strand, 9150955 - 9150916
Alignment:
Q  1 cccctattaaattttcggtttgatttgcaccctcgtaaaa 40  Q
    ||||||| ||||||||||||||||||||||||||||||||    
T  9150955 cccctataaaattttcggtttgatttgcaccctcgtaaaa 9150916  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #60
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 5 - 76
Target Start/End: Complemental strand, 49249649 - 49249578
Alignment:
Q  5 tattaaattttcggtttgatttgcaccctcgtaaaatttttattttccggtaaacacctttaatagaccatt 76  Q
    ||||||||||||||||| ||||||||||| ||||||  |||||||| | | ||||||| ||||||| |||||    
T  49249649 tattaaattttcggtttaatttgcacccttgtaaaaaatttatttttcagaaaacacccttaataggccatt 49249578  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #61
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 2 - 39
Target Start/End: Complemental strand, 12294597 - 12294560
Alignment:
Q  2 ccctattaaattttcggtttgatttgcaccctcgtaaa 39  Q
    |||||| |||||||||||||||||||||||||||||||    
T  12294597 ccctataaaattttcggtttgatttgcaccctcgtaaa 12294560  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #62
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 1 - 50
Target Start/End: Original strand, 23573212 - 23573261
Alignment:
Q  1 cccctattaaattttcggtttgatttgcaccctcgtaaaatttttatttt 50  Q
    ||||||| ||||||||||||||||||||||| | |||||| |||||||||    
T  23573212 cccctataaaattttcggtttgatttgcacctttgtaaaaattttatttt 23573261  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #63
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 9 - 70
Target Start/End: Original strand, 26717145 - 26717206
Alignment:
Q  9 aaattttcggtttgatttgcaccctcgtaaaatttttattttccggtaaacacctttaatag 70  Q
    ||||||||||| |||||||||| || |||||||||||||||||||  ||||||  |||||||    
T  26717145 aaattttcggtctgatttgcactcttgtaaaatttttattttccgaaaaacactcttaatag 26717206  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #64
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 1 - 62
Target Start/End: Complemental strand, 34443533 - 34443473
Alignment:
Q  1 cccctattaaattttcggtttgatttgcaccctcgtaaaatttttattttccggtaaacacc 62  Q
    ||||||| ||||||||||||||||||||| ||| |||||| |||| |||||||| |||||||    
T  34443533 cccctataaaattttcggtttgatttgcatccttgtaaaactttt-ttttccggaaaacacc 34443473  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #65
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 9 - 50
Target Start/End: Complemental strand, 39537535 - 39537494
Alignment:
Q  9 aaattttcggtttgatttgcaccctcgtaaaatttttatttt 50  Q
    ||||||||||||||||||||||| |||||||| |||||||||    
T  39537535 aaattttcggtttgatttgcaccatcgtaaaaattttatttt 39537494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #66
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 9 - 62
Target Start/End: Complemental strand, 39702433 - 39702380
Alignment:
Q  9 aaattttcggtttgatttgcaccctcgtaaaatttttattttccggtaaacacc 62  Q
    ||||||||||||||||||||| ||| |||||| |||| |||||||| |||||||    
T  39702433 aaattttcggtttgatttgcatccttgtaaaactttttttttccggaaaacacc 39702380  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #67
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 1 - 62
Target Start/End: Original strand, 40269612 - 40269673
Alignment:
Q  1 cccctattaaattttcggtttgatttgcaccctcgtaaaatttttattttccggtaaacacc 62  Q
    ||||||| ||||||||||||| ||||||||||| ||||||| | | |||||||| |||||||    
T  40269612 cccctataaaattttcggtttaatttgcacccttgtaaaatatattttttccggaaaacacc 40269673  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #68
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 1 - 38
Target Start/End: Complemental strand, 44868128 - 44868091
Alignment:
Q  1 cccctattaaattttcggtttgatttgcaccctcgtaa 38  Q
    ||||||| ||||||||||||||||||||||||||||||    
T  44868128 cccctataaaattttcggtttgatttgcaccctcgtaa 44868091  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #69
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 4 - 40
Target Start/End: Complemental strand, 13578893 - 13578857
Alignment:
Q  4 ctattaaattttcggtttgatttgcaccctcgtaaaa 40  Q
    |||| ||||||||||||||||||||||||||||||||    
T  13578893 ctataaaattttcggtttgatttgcaccctcgtaaaa 13578857  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #70
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 95
Target Start/End: Complemental strand, 15977524 - 15977429
Alignment:
Q  1 cccctattaaattttcggtttgatttgcaccctcgtaaaat-ttttattttccggtaaacacctttaatagaccattc-aaaaccaaaattttttga 95  Q
    ||||||| ||||||| ||||||||||| | ||||||||||| |||  |||||| | ||||||| |||| || |||||| ||||||||||||||||||    
T  15977524 cccctataaaatttttggtttgatttgtatcctcgtaaaatatttctttttccagaaaacacc-ttaacaggccattcaaaaaccaaaattttttga 15977429  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #71
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 4 - 67
Target Start/End: Complemental strand, 6788118 - 6788055
Alignment:
Q  4 ctattaaattttcggtttgatttgcaccctcgtaaaatttttattttccggtaaacacctttaa 67  Q
    |||| ||||||||  |||||||||| | ||||||| ||||||||||||||| ||||||| ||||    
T  6788118 ctataaaattttcaatttgatttgcgctctcgtaacatttttattttccggaaaacacccttaa 6788055  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #72
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 1 - 40
Target Start/End: Original strand, 13578719 - 13578758
Alignment:
Q  1 cccctattaaattttcggtttgatttgcaccctcgtaaaa 40  Q
    ||||||| |||||||||||||| |||||||||||||||||    
T  13578719 cccctataaaattttcggtttggtttgcaccctcgtaaaa 13578758  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #73
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 2 - 60
Target Start/End: Complemental strand, 17138765 - 17138706
Alignment:
Q  2 ccctattaaattttcggtttgatttgcaccctcgtaaaa-tttttattttccggtaaaca 60  Q
    |||||| ||||||||||||||||||||| ||| |||||| ||||| |||||||| |||||    
T  17138765 ccctataaaattttcggtttgatttgcatccttgtaaaacttttttttttccggaaaaca 17138706  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #74
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 9 - 76
Target Start/End: Complemental strand, 18909785 - 18909719
Alignment:
Q  9 aaattttcggtttgatttgcaccctcgtaaaatttttattttccggtaaacacctttaatagaccatt 76  Q
    |||||||| |||||||||||||| ||||||||||||||||||| |  |||||||  |||||| |||||    
T  18909785 aaattttcagtttgatttgcacc-tcgtaaaatttttattttctgaaaaacaccgctaataggccatt 18909719  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #75
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 1 - 76
Target Start/End: Original strand, 19042084 - 19042159
Alignment:
Q  1 cccctattaaattttcggtttgatttgcaccctcgtaaaatttttattttccggtaaacacctttaatagaccatt 76  Q
    ||||||| ||||||| ||||||||||||||||||||||| | ||  |||||| | |||||||  |||||| |||||    
T  19042084 cccctataaaatttttggtttgatttgcaccctcgtaaattattatttttccagaaaacacccctaataggccatt 19042159  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #76
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 2 - 40
Target Start/End: Original strand, 44434267 - 44434305
Alignment:
Q  2 ccctattaaattttcggtttgatttgcaccctcgtaaaa 40  Q
    |||||| ||||||||||||||||||||| ||||||||||    
T  44434267 ccctataaaattttcggtttgatttgcatcctcgtaaaa 44434305  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #77
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 3 - 40
Target Start/End: Complemental strand, 3239524 - 3239487
Alignment:
Q  3 cctattaaattttcggtttgatttgcaccctcgtaaaa 40  Q
    ||||| ||||||| ||||||||||||||||||||||||    
T  3239524 cctataaaatttttggtttgatttgcaccctcgtaaaa 3239487  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #78
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 38
Target Start/End: Complemental strand, 6378610 - 6378573
Alignment:
Q  1 cccctattaaattttcggtttgatttgcaccctcgtaa 38  Q
    ||||||| ||||||| ||||||||||||||||||||||    
T  6378610 cccctataaaatttttggtttgatttgcaccctcgtaa 6378573  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #79
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 3 - 76
Target Start/End: Original strand, 22324492 - 22324565
Alignment:
Q  3 cctattaaattttcggtttgatttgcaccctcgtaaaatttttattttccggtaaacacctttaatagaccatt 76  Q
    ||||| ||||||||||||||||||||| ||||| ||||  ||||||||  || |||||||  |||||| |||||    
T  22324492 cctataaaattttcggtttgatttgcatcctcgaaaaaaatttattttttggaaaacacccctaataggccatt 22324565  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #80
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 2 - 95
Target Start/End: Original strand, 23962752 - 23962848
Alignment:
Q  2 ccctattaaattttcggtttgatttgcaccctcgtaaa--atttttattttccggtaaacacctttaatagaccattc-aaaaccaaaattttttga 95  Q
    |||||| ||||||||||||||||||||| | |||||||   ||||| ||||||   ||||||| |||||||  ||||| ||||||||||||| ||||    
T  23962752 ccctatcaaattttcggtttgatttgcatcatcgtaaatttttttttttttccataaaacacccttaataggtcattcaaaaaccaaaatttcttga 23962848  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #81
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 50
Target Start/End: Original strand, 34442654 - 34442703
Alignment:
Q  1 cccctattaaattttcggtttgatttgcaccctcgtaaaatttttatttt 50  Q
    ||||||| ||||||||||||||||||||| ||| |||||| |||| ||||    
T  34442654 cccctataaaattttcggtttgatttgcatccttgtaaaacttttttttt 34442703  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #82
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 9 - 50
Target Start/End: Complemental strand, 55807647 - 55807606
Alignment:
Q  9 aaattttcggtttgatttgcaccctcgtaaaatttttatttt 50  Q
    ||||||||||||||||||||| ||| |||||| |||||||||    
T  55807647 aaattttcggtttgatttgcatccttgtaaaacttttatttt 55807606  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #83
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 4 - 40
Target Start/End: Original strand, 9663259 - 9663295
Alignment:
Q  4 ctattaaattttcggtttgatttgcaccctcgtaaaa 40  Q
    |||| |||||||||||||||||||||||||| |||||    
T  9663259 ctataaaattttcggtttgatttgcaccctcataaaa 9663295  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #84
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 1 - 45
Target Start/End: Original strand, 39702049 - 39702093
Alignment:
Q  1 cccctattaaattttcggtttgatttgcaccctcgtaaaattttt 45  Q
    ||||||| ||||||||||||||||||||| ||| |||||| ||||    
T  39702049 cccctataaaattttcggtttgatttgcatccttgtaaaactttt 39702093  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 68; Significance: 3e-30; HSPs: 76)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 1 - 128
Target Start/End: Original strand, 15734524 - 15734660
Alignment:
Q  1 cccctattaaattttcggtttgatttgcaccctcgtaaaatttttattttccggtaaacacctttaatagaccattc-aaaaccaaaattttttgaa--- 96  Q
    ||||||| |||||||||||||||||||||||||||||||| ||||||||||||| ||||||| ||||||| |||||| ||||||||||||| |||||       
T  15734524 cccctataaaattttcggtttgatttgcaccctcgtaaaaattttattttccggaaaacacccttaataggccattcaaaaaccaaaatttcttgaaaaa 15734623  T
Q  97 -----ctgaaaatgacctattaggggtgtttttcgga 128  Q
         ||||||||| ||||||||||||||||| ||||    
T  15734624 aaattctgaaaatggcctattaggggtgttttccgga 15734660  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 2 - 96
Target Start/End: Original strand, 39934982 - 39935077
Alignment:
Q  2 ccctattaaattttcggtttgatttgcaccctcgtaaaatttttattttccggtaaacacctttaatagaccattc-aaaaccaaaattttttgaa 96  Q
    |||||| |||||||||||||||||||||||||||||||||||||||||||||| ||||||| ||||||| |||||| ||||||||||||| |||||    
T  39934982 ccctataaaattttcggtttgatttgcaccctcgtaaaatttttattttccggaaaacacccttaataggccattcaaaaaccaaaatttcttgaa 39935077  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 1 - 128
Target Start/End: Original strand, 13430301 - 13430436
Alignment:
Q  1 cccctattaaattttcggtttgatttgcaccctcgtaaaatttttattttccggtaaacacctttaatagaccattc-aaaaccaaaattttttgaa--- 96  Q
    ||||||| |||||||| |||||||||||||||||||||||||||||||||| || ||||||| ||||||| |||||| |||| |||||||| |||||       
T  13430301 cccctataaaattttcagtttgatttgcaccctcgtaaaatttttattttctggaaaacacccttaataggccattcaaaaatcaaaatttcttgaaaaa 13430400  T
Q  97 ----ctgaaaatgacctattaggggtgtttttcgga 128  Q
        ||||||||| ||||||||||||||||||||||    
T  13430401 aattctgaaaatggcctattaggggtgtttttcgga 13430436  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 1 - 96
Target Start/End: Original strand, 11586279 - 11586375
Alignment:
Q  1 cccctattaaattttcggtttgatttgcaccctcgtaaaatttttattttccggtaaacacctttaatagaccattc-aaaaccaaaattttttgaa 96  Q
    ||||||| ||||||||||||||||||||||||| |||||||||||||||||||| ||||||| ||||||| |||||| ||||||||||||| |||||    
T  11586279 cccctataaaattttcggtttgatttgcacccttgtaaaatttttattttccggaaaacacccttaataggccattcaaaaaccaaaatttcttgaa 11586375  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 4 - 128
Target Start/End: Original strand, 12163218 - 12163349
Alignment:
Q  4 ctattaaattttcggtttgatttgcaccctcgtaaaatttttattttccggtaaacacctttaatagaccattc-aaaaccaaaattttttgaa------ 96  Q
    |||| |||||||||||||||||||||||||||||||||||||||||||||| ||||| | ||||||| ||| || ||||||||||||| |||||          
T  12163218 ctataaaattttcggtttgatttgcaccctcgtaaaatttttattttccggaaaacaaccttaataggccaatcaaaaaccaaaatttcttgaaaaaatt 12163317  T
Q  97 ctgaaaatgacctattaggggtgtttttcgga 128  Q
    ||||||||| ||||||||||||||||| ||||    
T  12163318 ctgaaaatggcctattaggggtgttttccgga 12163349  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 2 - 128
Target Start/End: Complemental strand, 26712243 - 26712109
Alignment:
Q  2 ccctattaaattttcggtttgatttgcaccctcgtaaaatttttattttccggtaaacacctttaatagaccattc-aaaaccaaaattttttgaa---- 96  Q
    |||||| |||||||||||||||||||||||||||||||||||||||||| ||| ||||||| ||||| | |||||| ||||||||||||| |||||        
T  26712243 ccctataaaattttcggtttgatttgcaccctcgtaaaatttttatttttcggaaaacacccttaattggccattcaaaaaccaaaatttcttgaaaaaa 26712144  T
Q  97 ---ctgaaaatgacctattaggggtgtttttcgga 128  Q
       ||||||||| ||||||||||||||||| ||||    
T  26712143 aatctgaaaatggcctattaggggtgttttccgga 26712109  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 64; E-Value: 6e-28
Query Start/End: Original strand, 1 - 76
Target Start/End: Complemental strand, 16985425 - 16985350
Alignment:
Q  1 cccctattaaattttcggtttgatttgcaccctcgtaaaatttttattttccggtaaacacctttaatagaccatt 76  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| |||||| |||||    
T  16985425 cccctattaaattttcggtttgatttgcaccctcgtaaaatttttattttccggaaaacacctctaataggccatt 16985350  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 1 - 90
Target Start/End: Complemental strand, 40633323 - 40633233
Alignment:
Q  1 cccctattaaattttcggtttgatttgcaccctcgtaaaatttttattttccggtaaacacctttaatagaccattc-aaaaccaaaattt 90  Q
    ||||||| |||||||||||||||||||||||||||||||||||||||||| ||| ||||||| ||||||| |||||| |||||||||||||    
T  40633323 cccctataaaattttcggtttgatttgcaccctcgtaaaatttttatttttcggaaaacacccttaataggccattcaaaaaccaaaattt 40633233  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 4 - 96
Target Start/End: Original strand, 16985243 - 16985336
Alignment:
Q  4 ctattaaattttcggtttgatttgcaccctcgtaaaatttttattttccggtaaacacctttaatagaccattc-aaaaccaaaattttttgaa 96  Q
    |||| |||||||||||||||||||||||||||||||||||||||||||||  ||||||| ||||||| |||||| ||||||||||||| |||||    
T  16985243 ctataaaattttcggtttgatttgcaccctcgtaaaatttttattttccgaaaaacacccttaataggccattcaaaaaccaaaatttcttgaa 16985336  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 12 - 123
Target Start/End: Complemental strand, 12886977 - 12886868
Alignment:
Q  12 ttttcggtttgatttgcaccctcgtaaaatttttattttccggtaaacacctttaatagaccattcaaaaccaaaattttttgaactgaaaatgacctat 111  Q
    ||||||||||||||||||||||||||||||||||||||||| | ||||||| ||||||| |||||||||| | |||||||||    |||||||| |||||    
T  12886977 ttttcggtttgatttgcaccctcgtaaaatttttattttccagaaaacacccttaataggccattcaaaaaccaaatttttt--tttgaaaatggcctat 12886880  T
Q  112 taggggtgtttt 123  Q
    ||| ||||||||    
T  12886879 tagtggtgtttt 12886868  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 4 - 128
Target Start/End: Complemental strand, 24169339 - 24169206
Alignment:
Q  4 ctattaaattttcggtttgatttgcaccctcgtaaaatttttattttccggtaaacacctttaatagaccattc-aaaaccaaaattttttgaa------ 96  Q
    |||| |||||||||||||||||||||||||||||||||||||||||||||  ||||||| ||||||| |||||| ||||||| ||||| |||||          
T  24169339 ctataaaattttcggtttgatttgcaccctcgtaaaatttttattttccgaaaaacacccttaataggccattcaaaaaccagaatttcttgaaaaaaaa 24169240  T
Q  97 --ctgaaaatgacctattaggggtgtttttcgga 128  Q
      ||||||||| ||||||||||||||||| ||||    
T  24169239 ttctgaaaatggcctattaggggtgttttccgga 24169206  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 12 - 123
Target Start/End: Complemental strand, 1340906 - 1340786
Alignment:
Q  12 ttttcggtttgatttgcaccctcgtaaaatttttattttccggtaaacacctttaatagaccattc-aaaaccaaaattttttgaa--------ctgaaa 102  Q
    ||||||||||||||||||||||||||||||||||||||||||| || |||||||||||| |||||| ||||||||| ||| |||||        ||||||    
T  1340906 ttttcggtttgatttgcaccctcgtaaaatttttattttccggaaagcacctttaataggccattcaaaaaccaaagtttcttgaaaaaaaattctgaaa 1340807  T
Q  103 atgacctattaggggtgtttt 123  Q
    ||| |||||||||||||||||    
T  1340806 atggcctattaggggtgtttt 1340786  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 1 - 128
Target Start/End: Original strand, 9631705 - 9631841
Alignment:
Q  1 cccctattaaattttcggtttgatttgcaccctcgtaaaatttttattttccggtaaacacctttaatagaccattc-aaaaccaaaattttttgaa--- 96  Q
    ||||||| |||||||||||||||||||||| ||||||||||||||||||||| | |||||||  |||||| |||||| ||||||||||||| |||||       
T  9631705 cccctataaaattttcggtttgatttgcactctcgtaaaatttttattttcctgaaaacacccctaataggccattcaaaaaccaaaatttcttgaaaaa 9631804  T
Q  97 -----ctgaaaatgacctattaggggtgtttttcgga 128  Q
         ||||||||| ||||||||||||||||| ||||    
T  9631805 aaattctgaaaatggcctattaggggtgttttccgga 9631841  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 59; E-Value: 6e-25
Query Start/End: Original strand, 1 - 123
Target Start/End: Complemental strand, 22374797 - 22374666
Alignment:
Q  1 cccctattaaattttcggtttgatttgcaccctcgtaaaatttttattttccggtaaacacctttaatagaccattc-aaaaccaaaattttttgaa--- 96  Q
    ||||||| ||||||||||||||||||||||||||||||||  ||||||||| || ||||||| ||||||| |||||| ||||||||||||| |||||       
T  22374797 cccctataaaattttcggtttgatttgcaccctcgtaaaaaatttattttctggaaaacacccttaataggccattcaaaaaccaaaatttcttgaaaaa 22374698  T
Q  97 -----ctgaaaatgacctattaggggtgtttt 123  Q
         ||||||||| |||||||||||||||||    
T  22374697 aaattctgaaaatggcctattaggggtgtttt 22374666  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 57; E-Value: 9e-24
Query Start/End: Original strand, 9 - 96
Target Start/End: Original strand, 1613649 - 1613737
Alignment:
Q  9 aaattttcggtttgatttgcaccctcgtaaaatttttattttccggtaaacacctttaatagaccattc-aaaaccaaaattttttgaa 96  Q
    |||||||||||||||||||||| ||||||||||||||||||| ||| ||||||| ||||||| |||||| ||||||||||||| |||||    
T  1613649 aaattttcggtttgatttgcacactcgtaaaatttttatttttcggaaaacacccttaataggccattcaaaaaccaaaatttcttgaa 1613737  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 9 - 128
Target Start/End: Original strand, 6953938 - 6954066
Alignment:
Q  9 aaattttcggtttgatttgcaccctcgtaaaatttttattttccggtaaacacctttaatagaccattc-aaaaccaaaattttttgaa--------ctg 99  Q
    |||||||||||||||||||||  |||||||||||||||||||| || ||||||| ||||||| |||||| ||||||||||||| |||||        |||    
T  6953938 aaattttcggtttgatttgcatactcgtaaaatttttattttctggaaaacacccttaataggccattcaaaaaccaaaatttcttgaaaaaaaattctg 6954037  T
Q  100 aaaatgacctattaggggtgtttttcgga 128  Q
    |||||| ||||||||||||||||| ||||    
T  6954038 aaaatggcctattaggggtgttttccgga 6954066  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 1 - 76
Target Start/End: Complemental strand, 6954115 - 6954040
Alignment:
Q  1 cccctattaaattttcggtttgatttgcaccctcgtaaaatttttattttccggtaaacacctttaatagaccatt 76  Q
    ||||||| |||||||||||||||||||||||||||||||||||||||||||||| |||||||  |||||| |||||    
T  6954115 cccctataaaattttcggtttgatttgcaccctcgtaaaatttttattttccggaaaacacccctaataggccatt 6954040  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 1 - 76
Target Start/End: Original strand, 40633138 - 40633213
Alignment:
Q  1 cccctattaaattttcggtttgatttgcaccctcgtaaaatttttattttccggtaaacacctttaatagaccatt 76  Q
    ||||||| ||||||||||| |||||||||||||||||||||||||||||||||| ||||||| ||||||| |||||    
T  40633138 cccctataaaattttcggtgtgatttgcaccctcgtaaaatttttattttccggaaaacacccttaataggccatt 40633213  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 1 - 128
Target Start/End: Original strand, 51166731 - 51166867
Alignment:
Q  1 cccctattaaattttcggtttgatttgcaccctcgtaaaatttttattttccggtaaacacctttaatagaccattc-aaaaccaaaattttttgaa--- 96  Q
    ||||||| |||||||||||||||||||||||||||||||| ||||||||| ||  ||||||| |||||||  ||||| ||||||||||||| |||||       
T  51166731 cccctataaaattttcggtttgatttgcaccctcgtaaaaattttatttttcgaaaaacacccttaataggtcattcaaaaaccaaaatttcttgaaata 51166830  T
Q  97 -----ctgaaaatgacctattaggggtgtttttcgga 128  Q
         ||||||||| ||||||||||||||||| ||||    
T  51166831 aaattctgaaaatggcctattaggggtgttttccgga 51166867  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 9 - 90
Target Start/End: Complemental strand, 6587706 - 6587624
Alignment:
Q  9 aaattttcggtttgatttgcaccctcgtaaaatttttattttccggtaaacacctttaatagaccattc-aaaaccaaaattt 90  Q
    |||||||||||||||||||||| ||||||||| ||||||||||||| ||||||| ||||||| |||||| |||||||||||||    
T  6587706 aaattttcggtttgatttgcacactcgtaaaaattttattttccggaaaacacccttaataggccattcaaaaaccaaaattt 6587624  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 1 - 90
Target Start/End: Original strand, 9403372 - 9403462
Alignment:
Q  1 cccctattaaattttcggtttgatttgcaccctcgtaaaatttttattttccggtaaacacctttaatagaccattc-aaaaccaaaattt 90  Q
    ||||||| |||||||||||||||||||||||||||||||| |||||||| |||| ||| ||| ||||||| |||||| |||||||||||||    
T  9403372 cccctataaaattttcggtttgatttgcaccctcgtaaaaattttatttcccggaaaatacccttaataggccattcaaaaaccaaaattt 9403462  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 3 - 81
Target Start/End: Original strand, 26379694 - 26379772
Alignment:
Q  3 cctattaaattttcggtttgatttgcaccctcgtaaaatttttattttccggtaaacacctttaatagaccattcaaaa 81  Q
    ||||| ||||||||||||| |||||||| |||||||||||| |||||||||  ||||||||||||||||||||||||||    
T  26379694 cctataaaattttcggtttaatttgcacactcgtaaaatttgtattttccgaaaaacacctttaatagaccattcaaaa 26379772  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 9 - 90
Target Start/End: Complemental strand, 45323414 - 45323332
Alignment:
Q  9 aaattttcggtttgatttgcaccctcgtaaaatttttattttccggtaaacacctttaatagaccattc-aaaaccaaaattt 90  Q
    ||||||||||||||||||||||||||||||| ||||||||||  || ||||||| |||||||||||||| |||||||||||||    
T  45323414 aaattttcggtttgatttgcaccctcgtaaattttttattttttggaaaacacccttaatagaccattcaaaaaccaaaattt 45323332  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 4 - 96
Target Start/End: Original strand, 5246325 - 5246418
Alignment:
Q  4 ctattaaattttcggtttgatttgcaccctcgtaaaatttttattttccggtaaacacctttaatagaccattc-aaaaccaaaattttttgaa 96  Q
    |||| |||||||||||||||||||||||||||||||| ||||||||||||| | ||| | ||||||| |||||| ||||||||||||| |||||    
T  5246325 ctataaaattttcggtttgatttgcaccctcgtaaaaattttattttccggaagacatccttaataggccattcaaaaaccaaaatttcttgaa 5246418  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 3 - 76
Target Start/End: Original strand, 29525674 - 29525747
Alignment:
Q  3 cctattaaattttcggtttgatttgcaccctcgtaaaatttttattttccggtaaacacctttaatagaccatt 76  Q
    ||||| |||||||||||||||||||||||||| ||||||||||||||||||| |||||||| |||||| |||||    
T  29525674 cctataaaattttcggtttgatttgcaccctcataaaatttttattttccggaaaacacctctaataggccatt 29525747  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 2 - 123
Target Start/End: Complemental strand, 38601404 - 38601274
Alignment:
Q  2 ccctattaaattttcggtttgatttgcaccctcgtaaaatttttattttccggtaaacacctttaatagaccattc-aaaaccaaaattttttgaa---- 96  Q
    |||||| ||||||||||||||||||  ||||||||||||| |||||||||||| ||||||| |||||||  ||||| ||||||||||||| |||||        
T  38601404 ccctataaaattttcggtttgatttttaccctcgtaaaatctttattttccggaaaacacccttaatagggcattcaaaaaccaaaatttcttgaaaaaa 38601305  T
Q  97 ----ctgaaaatgacctattaggggtgtttt 123  Q
        ||||||||| |||||||||||||||||    
T  38601304 aaatctgaaaatggcctattaggggtgtttt 38601274  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 1 - 61
Target Start/End: Original strand, 15541479 - 15541539
Alignment:
Q  1 cccctattaaattttcggtttgatttgcaccctcgtaaaatttttattttccggtaaacac 61  Q
    ||||||| |||||||||||||||||||||||||||||||||||||||||||||| ||||||    
T  15541479 cccctataaaattttcggtttgatttgcaccctcgtaaaatttttattttccggaaaacac 15541539  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 1 - 96
Target Start/End: Complemental strand, 15541664 - 15541568
Alignment:
Q  1 cccctattaaattttcggtttgatttgcaccctcgtaaaatttttattttccggtaaacacctttaatagaccattc-aaaaccaaaattttttgaa 96  Q
    ||||||| |||||||| ||||||||||||||||||||||| ||||||||| ||| ||||||| |||||||  ||||| ||||||||||||| |||||    
T  15541664 cccctataaaattttcagtttgatttgcaccctcgtaaaacttttatttttcggaaaacacccttaataggtcattcaaaaaccaaaatttcttgaa 15541568  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 9 - 96
Target Start/End: Complemental strand, 25395645 - 25395557
Alignment:
Q  9 aaattttcggtttgatttgcaccctcgtaaaatttttattttccggtaaacacctttaatagaccattc-aaaaccaaaattttttgaa 96  Q
    ||||||| ||||||||||||||||||||||||| |||||||||||| ||||||| |||||||  ||||| ||||||||||||| |||||    
T  25395645 aaatttttggtttgatttgcaccctcgtaaaatatttattttccggaaaacacccttaataggtcattcaaaaaccaaaatttcttgaa 25395557  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 1 - 76
Target Start/End: Complemental strand, 5246506 - 5246431
Alignment:
Q  1 cccctattaaattttcggtttgatttgcaccctcgtaaaatttttattttccggtaaacacctttaatagaccatt 76  Q
    ||||||| |||||||||||||||||||||||||||||||||||||||||||  | ||||||| ||||||| |||||    
T  5246506 cccctataaaattttcggtttgatttgcaccctcgtaaaatttttattttctagaaaacacccttaataggccatt 5246431  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 1 - 76
Target Start/End: Complemental strand, 9631890 - 9631815
Alignment:
Q  1 cccctattaaattttcggtttgatttgcaccctcgtaaaatttttattttccggtaaacacctttaatagaccatt 76  Q
    ||||||| |||||||||||||||||||||||||||||||| ||||||||||||| |||||||  |||||| |||||    
T  9631890 cccctataaaattttcggtttgatttgcaccctcgtaaaaattttattttccggaaaacacccctaataggccatt 9631815  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 9 - 76
Target Start/End: Complemental strand, 15734788 - 15734721
Alignment:
Q  9 aaattttcggtttgatttgcaccctcgtaaaatttttattttccggtaaacacctttaatagaccatt 76  Q
    |||||||||||||||||||||||||||||||||||||||||||||| |||||||  |||||| |||||    
T  15734788 aaattttcggtttgatttgcaccctcgtaaaatttttattttccggaaaacacccctaataggccatt 15734721  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 1 - 90
Target Start/End: Complemental strand, 23284914 - 23284824
Alignment:
Q  1 cccctattaaattttcggtttgatttgcaccctcgtaaaatttttattttccggtaaacacctttaatagaccattc-aaaaccaaaattt 90  Q
    ||||||| |||||||||||||||||| ||| ||||||||||||||||||||||  ||||| | ||||||| |||||| |||||||||||||    
T  23284914 cccctataaaattttcggtttgatttacactctcgtaaaatttttattttccgaaaaacatccttaataggccattcaaaaaccaaaattt 23284824  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 9 - 123
Target Start/End: Original strand, 44545691 - 44545814
Alignment:
Q  9 aaattttcggtttgatttgcaccctcgtaaaatttttattttccggtaaacacctttaatagaccattc-aaaaccaaaattttttgaa--------ctg 99  Q
    |||||||| ||||||||||| ||||||||||| ||||||||||||  ||||||| ||||||| |||||| ||||||||||||| |||||        |||    
T  44545691 aaattttctgtttgatttgcgccctcgtaaaaattttattttccgcaaaacacccttaataggccattcaaaaaccaaaatttcttgaaaaaaaaatctg 44545790  T
Q  100 aaaatgacctattaggggtgtttt 123  Q
    |||||| |||||||||||||||||    
T  44545791 aaaatggcctattaggggtgtttt 44545814  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 1 - 62
Target Start/End: Original strand, 27270387 - 27270448
Alignment:
Q  1 cccctattaaattttcggtttgatttgcaccctcgtaaaatttttattttccggtaaacacc 62  Q
    |||||||  ||||||||||||||||||||||||||||||||||||||||||||| |||||||    
T  27270387 cccctatacaattttcggtttgatttgcaccctcgtaaaatttttattttccggaaaacacc 27270448  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 9 - 89
Target Start/End: Complemental strand, 29525849 - 29525768
Alignment:
Q  9 aaattttcggtttgatttgcaccctcgtaaaatttttattttccggtaaacacctttaatagaccattc-aaaaccaaaatt 89  Q
    ||||||||||| |||||||||||||||||||| ||||||||||||| ||||| | ||||||| |||||| ||||||||||||    
T  29525849 aaattttcggtatgatttgcaccctcgtaaaaattttattttccggaaaacatccttaataggccattcaaaaaccaaaatt 29525768  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 3 - 76
Target Start/End: Complemental strand, 39935164 - 39935091
Alignment:
Q  3 cctattaaattttcggtttgatttgcaccctcgtaaaatttttattttccggtaaacacctttaatagaccatt 76  Q
    ||||| |||||||||||||||||||||||||||||||| ||||||||||||| |||||||  |||||| |||||    
T  39935164 cctataaaattttcggtttgatttgcaccctcgtaaaaattttattttccggaaaacacccctaataggccatt 39935091  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 2 - 128
Target Start/End: Complemental strand, 29641826 - 29641692
Alignment:
Q  2 ccctattaaattttcggtttgatttgcaccctcgtaaaatttttattttccggtaaacacctttaatagaccattc-aaaaccaaaattttttgaa---- 96  Q
    |||||| ||||||||||||||||||||||| || ||||| |||||||||||   ||||||| ||||||| |||||| ||||||||||||| |||||        
T  29641826 ccctataaaattttcggtttgatttgcaccttcataaaaattttattttccaaaaaacacccttaataggccattcaaaaaccaaaatttcttgaaaaaa 29641727  T
Q  97 ---ctgaaaatgacctattaggggtgtttttcgga 128  Q
       ||||||||  | ||||||||||||||||||||    
T  29641726 aatctgaaaatagcttattaggggtgtttttcgga 29641692  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 9 - 76
Target Start/End: Complemental strand, 12163390 - 12163323
Alignment:
Q  9 aaattttcggtttgatttgcaccctcgtaaaatttttattttccggtaaacacctttaatagaccatt 76  Q
    ||||||||||||||| |||||||||||||||||||||||||||||| |||||||  |||||| |||||    
T  12163390 aaattttcggtttgaattgcaccctcgtaaaatttttattttccggaaaacacccctaataggccatt 12163323  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 1 - 76
Target Start/End: Original strand, 12886814 - 12886889
Alignment:
Q  1 cccctattaaattttcggtttgatttgcaccctcgtaaaatttttattttccggtaaacacctttaatagaccatt 76  Q
    ||||||| |||||||||||||||||||||||||||||||| ||||||||||| | |||||||  |||||| |||||    
T  12886814 cccctataaaattttcggtttgatttgcaccctcgtaaaaattttattttccagaaaacaccactaataggccatt 12886889  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 2 - 61
Target Start/End: Complemental strand, 37216474 - 37216415
Alignment:
Q  2 ccctattaaattttcggtttgatttgcaccctcgtaaaatttttattttccggtaaacac 61  Q
    |||||| |||||||||||||||||||||||||||||||| ||||||||||||| ||||||    
T  37216474 ccctataaaattttcggtttgatttgcaccctcgtaaaaattttattttccggaaaacac 37216415  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 1 - 76
Target Start/End: Original strand, 38601220 - 38601295
Alignment:
Q  1 cccctattaaattttcggtttgatttgcaccctcgtaaaatttttattttccggtaaacacctttaatagaccatt 76  Q
    ||||||| ||||||||||||||||||||| |||||||||||||||||||| ||| |||||||  |||||| |||||    
T  38601220 cccctataaaattttcggtttgatttgcagcctcgtaaaatttttatttttcggaaaacacccctaataggccatt 38601295  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 1 - 76
Target Start/End: Original strand, 48044734 - 48044809
Alignment:
Q  1 cccctattaaattttcggtttgatttgcaccctcgtaaaatttttattttccggtaaacacctttaatagaccatt 76  Q
    ||||||| |||||||||||||||||||||||||| ||||| ||||||||||||| |||||||  |||||| |||||    
T  48044734 cccctataaaattttcggtttgatttgcaccctcataaaaattttattttccggaaaacacccctaataggccatt 48044809  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 9 - 90
Target Start/End: Original strand, 1819142 - 1819223
Alignment:
Q  9 aaattttcggtttgatttgcaccctcgtaaaatttttattttccggtaaacacctttaatagaccattc-aaaaccaaaattt 90  Q
    ||||||||||||||||||||| |||||||||||||  ||||||||| ||||||| ||||||| |||||| |||||||||||||    
T  1819142 aaattttcggtttgatttgcatcctcgtaaaatttaaattttccgg-aaacacccttaataggccattcaaaaaccaaaattt 1819223  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 4 - 53
Target Start/End: Original strand, 16985074 - 16985123
Alignment:
Q  4 ctattaaattttcggtttgatttgcaccctcgtaaaatttttattttccg 53  Q
    |||| |||||||||||||||||||||||||||||||||||||||||||||    
T  16985074 ctataaaattttcggtttgatttgcaccctcgtaaaatttttattttccg 16985123  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 1 - 76
Target Start/End: Original strand, 1340732 - 1340807
Alignment:
Q  1 cccctattaaattttcggtttgatttgcaccctcgtaaaatttttattttccggtaaacacctttaatagaccatt 76  Q
    ||||||| ||||||||||||| |||||||||||||||||| ||||||||||| | |||||||  |||||| |||||    
T  1340732 cccctataaaattttcggtttaatttgcaccctcgtaaaaattttattttccagaaaacacccctaataggccatt 1340807  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 9 - 76
Target Start/End: Complemental strand, 1613820 - 1613753
Alignment:
Q  9 aaattttcggtttgatttgcaccctcgtaaaatttttattttccggtaaacacctttaatagaccatt 76  Q
    ||||||| ||||| ||||||||| |||||||||||||||||||||| ||||||| ||||||| |||||    
T  1613820 aaatttttggtttaatttgcaccttcgtaaaatttttattttccggaaaacacccttaataggccatt 1613753  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #48
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 1 - 76
Target Start/End: Complemental strand, 1819318 - 1819243
Alignment:
Q  1 cccctattaaattttcggtttgatttgcaccctcgtaaaatttttattttccggtaaacacctttaatagaccatt 76  Q
    ||||||| ||||||||||||||||||| ||| |||||||| ||||||||||||| |||||||  |||||| |||||    
T  1819318 cccctataaaattttcggtttgatttgtaccatcgtaaaaattttattttccggaaaacacccctaataggccatt 1819243  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #49
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 9 - 76
Target Start/End: Complemental strand, 9403548 - 9403481
Alignment:
Q  9 aaattttcggtttgatttgcaccctcgtaaaatttttattttccggtaaacacctttaatagaccatt 76  Q
    ||||||||||||||||||| |||||||||||||||||||||||| | |||||||  |||||| |||||    
T  9403548 aaattttcggtttgatttgtaccctcgtaaaatttttattttccagaaaacacccctaataggccatt 9403481  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #50
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 1 - 76
Target Start/End: Original strand, 22374612 - 22374687
Alignment:
Q  1 cccctattaaattttcggtttgatttgcaccctcgtaaaatttttattttccggtaaacacctttaatagaccatt 76  Q
    ||||||| |||||||| ||||||||| ||||||||||||||||||||||||| | |||||||  |||||| |||||    
T  22374612 cccctataaaattttcagtttgatttacaccctcgtaaaatttttattttccagaaaacacccctaataggccatt 22374687  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #51
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 1 - 52
Target Start/End: Original strand, 46173102 - 46173153
Alignment:
Q  1 cccctattaaattttcggtttgatttgcaccctcgtaaaatttttattttcc 52  Q
    ||||||| |||||||||||||||||||||||||||||||| |||||||||||    
T  46173102 cccctataaaattttcggtttgatttgcaccctcgtaaaaattttattttcc 46173153  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #52
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 1 - 62
Target Start/End: Complemental strand, 11586464 - 11586403
Alignment:
Q  1 cccctattaaattttcggtttgatttgcaccctcgtaaaatttttattttccggtaaacacc 62  Q
    ||||||| |||||||||||||| |||||||| |||||||||||||||||||| | |||||||    
T  11586464 cccctataaaattttcggtttggtttgcaccatcgtaaaatttttattttccagaaaacacc 11586403  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #53
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 2 - 96
Target Start/End: Complemental strand, 51238190 - 51238098
Alignment:
Q  2 ccctattaaattttcggtttgatttgcaccctcgtaaaatttttattttccggtaaacacctttaatagaccattc-aaaaccaaaattttttgaa 96  Q
    |||||| ||||||||||||||||||||||||||||||| ||||| | || ||| |||||   ||||||| |||||| ||||||||||||| |||||    
T  51238190 ccctataaaattttcggtttgatttgcaccctcgtaaattttttttatttcggaaaaca---ttaataggccattcaaaaaccaaaatttcttgaa 51238098  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #54
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 4 - 60
Target Start/End: Complemental strand, 47675405 - 47675349
Alignment:
Q  4 ctattaaattttcggtttgatttgcaccctcgtaaaatttttattttccggtaaaca 60  Q
    |||| |||||||||||||||||||||||||||||||| ||||||||| ||| |||||    
T  47675405 ctataaaattttcggtttgatttgcaccctcgtaaaaattttatttttcggaaaaca 47675349  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #55
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 1 - 76
Target Start/End: Complemental strand, 13430484 - 13430410
Alignment:
Q  1 cccctattaaattttcggtttgatttgcaccctcgtaaaatttttattttccggtaaacacctttaatagaccatt 76  Q
    ||||||| |||||||||||||||||||||||||||| ||||| ||||||||||  |||||||  |||||| |||||    
T  13430484 cccctataaaattttcggtttgatttgcaccctcgt-aaattattattttccgaaaaacacccctaataggccatt 13430410  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #56
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 9 - 76
Target Start/End: Original strand, 25395476 - 25395543
Alignment:
Q  9 aaattttcggtttgatttgcaccctcgtaaaatttttattttccggtaaacacctttaatagaccatt 76  Q
    ||||||||||||||||||||||||||||||| |||||||| || || |||||||  |||||| |||||    
T  25395476 aaattttcggtttgatttgcaccctcgtaaattttttattctctggaaaacacccataataggccatt 25395543  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #57
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 1 - 76
Target Start/End: Original strand, 26712060 - 26712135
Alignment:
Q  1 cccctattaaattttcggtttgatttgcaccctcgtaaaatttttattttccggtaaacacctttaatagaccatt 76  Q
    ||||||| ||||||||||||||||||||||||| ||||||   ||||||||||| |||||||  |||||| |||||    
T  26712060 cccctataaaattttcggtttgatttgcacccttgtaaaaaaattattttccggaaaacacccctaataggccatt 26712135  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #58
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 9 - 76
Target Start/End: Complemental strand, 35552206 - 35552139
Alignment:
Q  9 aaattttcggtttgatttgcaccctcgtaaaatttttattttccggtaaacacctttaatagaccatt 76  Q
    |||||||||||||||||||||||||||| ||| |||||||||  || ||||||| ||||||| |||||    
T  35552206 aaattttcggtttgatttgcaccctcgtgaaaattttattttttggaaaacacccttaataggccatt 35552139  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #59
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 2 - 95
Target Start/End: Complemental strand, 16087382 - 16087288
Alignment:
Q  2 ccctattaaattttcggtttgatttgcaccctcgtaaaatttttattttccggtaaacacctttaatagaccattc-aaaaccaaaattttttga 95  Q
    |||||| ||||||||| ||||||||||| ||||||||||| | | ||||||   ||||||| ||||||| |||||| ||||||||||||| ||||    
T  16087382 ccctataaaattttcgatttgatttgcatcctcgtaaaatatattttttccaaaaaacacccttaataggccattcaaaaaccaaaatttcttga 16087288  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #60
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 9 - 128
Target Start/End: Complemental strand, 48044911 - 48044783
Alignment:
Q  9 aaattttcggtttgatttgcaccctcgtaaaatttttattttccggtaaacacctttaatagaccattc-aaaaccaaaattttttgaa---------ct 98  Q
    ||||||||||||| ||||||| ||||||||  | ||| |||||||| ||||||| ||||||| |||||| ||||||||||||| |||||         ||    
T  48044911 aaattttcggtttaatttgca-cctcgtaatttattttttttccggaaaacacccttaataggccattcaaaaaccaaaatttcttgaaaaaaaaattct 48044813  T
Q  99 gaaaatgacctattaggggtgtttttcgga 128  Q
    ||||||| ||||||||||||||||| ||||    
T  48044812 gaaaatggcctattaggggtgttttccgga 48044783  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #61
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 20 - 81
Target Start/End: Complemental strand, 49613749 - 49613688
Alignment:
Q  20 ttgatttgcaccctcgtaaaatttttattttccggtaaacacctttaatagaccattcaaaa 81  Q
    ||||||||||||||| ||||||||||||||||| | ||||| | ||||||| ||||||||||    
T  49613749 ttgatttgcaccctcttaaaatttttattttcccgaaaacatccttaataggccattcaaaa 49613688  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #62
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 4 - 76
Target Start/End: Original strand, 24169160 - 24169232
Alignment:
Q  4 ctattaaattttcggtttgatttgcaccctcgtaaaatttttattttccggtaaacacctttaatagaccatt 76  Q
    |||| |||||||||||||||||||||||||||||||| ||  | ||||||| |||||||  |||||| |||||    
T  24169160 ctataaaattttcggtttgatttgcaccctcgtaaaaattaaaatttccggaaaacacccctaataggccatt 24169232  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #63
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 2 - 62
Target Start/End: Original strand, 35552034 - 35552094
Alignment:
Q  2 ccctattaaattttcggtttgatttgcaccctcgtaaaatttttattttccggtaaacacc 62  Q
    |||||| ||| ||| ||||||||||||||||||||||||  |||||||||||| |||||||    
T  35552034 ccctataaaaattttggtttgatttgcaccctcgtaaaaaatttattttccggaaaacacc 35552094  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #64
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 4 - 76
Target Start/End: Original strand, 49613579 - 49613651
Alignment:
Q  4 ctattaaattttcggtttgatttgcaccctcgtaaaatttttattttccggtaaacacctttaatagaccatt 76  Q
    |||| ||||||||| |||||||||||  ||||||||| ||||||||||||| |||||||  ||| ||||||||    
T  49613579 ctataaaattttcgatttgatttgcaatctcgtaaaaattttattttccggaaaacacccctaagagaccatt 49613651  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #65
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 1 - 40
Target Start/End: Original strand, 44345055 - 44345094
Alignment:
Q  1 cccctattaaattttcggtttgatttgcaccctcgtaaaa 40  Q
    ||||||| ||||||||||||||||||||||||||||||||    
T  44345055 cccctataaaattttcggtttgatttgcaccctcgtaaaa 44345094  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #66
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 1 - 44
Target Start/End: Original strand, 45323239 - 45323282
Alignment:
Q  1 cccctattaaattttcggtttgatttgcaccctcgtaaaatttt 44  Q
    ||||||| ||||||||||||||||||||||||| ||||||||||    
T  45323239 cccctataaaattttcggtttgatttgcacccttgtaaaatttt 45323282  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #67
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 1 - 96
Target Start/End: Original strand, 163157 - 163254
Alignment:
Q  1 cccctattaaattttcggtttgatttgcaccctcgtaaaatttttattttccggtaaacacctttaatagaccattcaaaa--ccaaaattttttgaa 96  Q
    ||||||| ||||||||| |||||||| || ||||||||||| ||| |||||||  ||||||| ||| |||  |||||||||  ||||||||| |||||    
T  163157 cccctataaaattttcgatttgatttacatcctcgtaaaatattttttttccgaaaaacacccttactaggtcattcaaaaacccaaaatttcttgaa 163254  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #68
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 4 - 40
Target Start/End: Original strand, 17889576 - 17889612
Alignment:
Q  4 ctattaaattttcggtttgatttgcaccctcgtaaaa 40  Q
    |||| ||||||||||||||||||||||||||||||||    
T  17889576 ctataaaattttcggtttgatttgcaccctcgtaaaa 17889612  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #69
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 9 - 40
Target Start/End: Complemental strand, 17889755 - 17889724
Alignment:
Q  9 aaattttcggtttgatttgcaccctcgtaaaa 40  Q
    ||||||||||||||||||||||||||||||||    
T  17889755 aaattttcggtttgatttgcaccctcgtaaaa 17889724  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #70
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 3 - 38
Target Start/End: Complemental strand, 44345233 - 44345198
Alignment:
Q  3 cctattaaattttcggtttgatttgcaccctcgtaa 38  Q
    ||||| ||||||||||||||||||||||||||||||    
T  44345233 cctataaaattttcggtttgatttgcaccctcgtaa 44345198  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #71
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 2 - 76
Target Start/End: Complemental strand, 32116404 - 32116331
Alignment:
Q  2 ccctattaaattttcggtttgatttgcaccctcgtaaaatttttattttccggtaaacacctttaatagaccatt 76  Q
    |||||| ||||||||||||||||||| | ||||||||||| | | |||| ||| ||||||| ||||||| |||||    
T  32116404 ccctataaaattttcggtttgatttgtatcctcgtaaaatatat-tttttcggaaaacacccttaataggccatt 32116331  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #72
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 9 - 62
Target Start/End: Original strand, 43060977 - 43061031
Alignment:
Q  9 aaattttcggtttgatttgcaccctcgtaaaa-tttttattttccggtaaacacc 62  Q
    ||||||||||||||||||||| ||| |||||| ||||| |||||||| |||||||    
T  43060977 aaattttcggtttgatttgcatccttgtaaaacttttttttttccggaaaacacc 43061031  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #73
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 62
Target Start/End: Original strand, 23513760 - 23513820
Alignment:
Q  1 cccctattaaattttcggtttgatttgcaccctcgtaaaatttttattttccggtaaacacc 62  Q
    ||||| ||||||||||||||||||||||| ||| |||||| |||| |||||| | |||||||    
T  23513760 cccctgttaaattttcggtttgatttgcatccttgtaaaactttt-ttttccagaaaacacc 23513820  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #74
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 2 - 38
Target Start/End: Original strand, 29641643 - 29641679
Alignment:
Q  2 ccctattaaattttcggtttgatttgcaccctcgtaa 38  Q
    |||||| ||||||||||||||| ||||||||||||||    
T  29641643 ccctataaaattttcggtttgagttgcaccctcgtaa 29641679  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #75
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 2 - 50
Target Start/End: Complemental strand, 33465843 - 33465795
Alignment:
Q  2 ccctattaaattttcggtttgatttgcaccctcgtaaaatttttatttt 50  Q
    |||||| ||||||||||||||||||||| ||| ||||||| ||| ||||    
T  33465843 ccctataaaattttcggtttgatttgcatccttgtaaaatatttttttt 33465795  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #76
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 1 - 41
Target Start/End: Original strand, 52881260 - 52881300
Alignment:
Q  1 cccctattaaattttcggtttgatttgcaccctcgtaaaat 41  Q
    ||||||| ||||||||||||||||||||| |||| ||||||    
T  52881260 cccctataaaattttcggtttgatttgcatcctcataaaat 52881300  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0420 (Bit Score: 65; Significance: 2e-28; HSPs: 2)
Name: scaffold0420
Description:

Target: scaffold0420; HSP #1
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 1 - 96
Target Start/End: Complemental strand, 4480 - 4384
Alignment:
Q  1 cccctattaaattttcggtttgatttgcaccctcgtaaaatttttattttccggtaaacacctttaatagaccattc-aaaaccaaaattttttgaa 96  Q
    ||||||| ||||||||||||||||||||||||||||||| |||||||||||||| ||||||| ||||||| |||||| ||||||||||||| |||||    
T  4480 cccctataaaattttcggtttgatttgcaccctcgtaaattttttattttccggaaaacacccttaataggccattcaaaaaccaaaatttcttgaa 4384  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0420; HSP #2
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 3 - 62
Target Start/End: Original strand, 4296 - 4356
Alignment:
Q  3 cctattaaattttcggtttgatttgcaccctcgtaaaa-tttttattttccggtaaacacc 62  Q
    ||||| |||||||||||||||||||||||||||||||| |||||||||||||| |||||||    
T  4296 cctataaaattttcggtttgatttgcaccctcgtaaaattttttattttccggaaaacacc 4356  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0599 (Bit Score: 64; Significance: 6e-28; HSPs: 2)
Name: scaffold0599
Description:

Target: scaffold0599; HSP #1
Raw Score: 64; E-Value: 6e-28
Query Start/End: Original strand, 1 - 128
Target Start/End: Original strand, 6642 - 6778
Alignment:
Q  1 cccctattaaattttcggtttgatttgcaccctcgtaaaatttttattttccggtaaacacctttaatagaccattc-aaaaccaaaattttttgaa--- 96  Q
    ||||||| ||||||||||||| |||| |||||||||||||||||||||||| || ||||||| ||||||| |||||| |||||||||||||||||||       
T  6642 cccctataaaattttcggtttaattttcaccctcgtaaaatttttattttctggaaaacacccttaataggccattcaaaaaccaaaattttttgaaaaa 6741  T
Q  97 -----ctgaaaatgacctattaggggtgtttttcgga 128  Q
         ||||||||| ||||||||||||||||| ||||    
T  6742 aaattctgaaaatggcctattaggggtgttttccgga 6778  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0599; HSP #2
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 4 - 76
Target Start/End: Complemental strand, 6824 - 6752
Alignment:
Q  4 ctattaaattttcggtttgatttgcaccctcgtaaaatttttattttccggtaaacacctttaatagaccatt 76  Q
    |||| |||||||||||||||||||||||||||||||| ||||||||||||| |||||||  |||||| |||||    
T  6824 ctataaaattttcggtttgatttgcaccctcgtaaaaattttattttccggaaaacacccctaataggccatt 6752  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0031 (Bit Score: 64; Significance: 6e-28; HSPs: 1)
Name: scaffold0031
Description:

Target: scaffold0031; HSP #1
Raw Score: 64; E-Value: 6e-28
Query Start/End: Original strand, 1 - 128
Target Start/End: Complemental strand, 92900 - 92764
Alignment:
Q  1 cccctattaaattttcggtttgatttgcaccctcgtaaaatttttattttccggtaaacacctttaatagaccattc-aaaaccaaaattttttgaa--- 96  Q
    ||||||| |||||||| |||||||||||||||||||||||||||||||||| || ||||||| ||||||| |||||| ||||||||||||| |||||       
T  92900 cccctataaaattttcagtttgatttgcaccctcgtaaaatttttattttctggaaaacacccttaataggccattcaaaaaccaaaatttcttgaaatt 92801  T
Q  97 -----ctgaaaatgacctattaggggtgtttttcgga 128  Q
         ||||||||  ||||||||||||||||||||||    
T  92800 tttttctgaaaatagcctattaggggtgtttttcgga 92764  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0740 (Bit Score: 63; Significance: 2e-27; HSPs: 2)
Name: scaffold0740
Description:

Target: scaffold0740; HSP #1
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 2 - 128
Target Start/End: Original strand, 2944 - 3079
Alignment:
Q  2 ccctattaaattttcggtttgatttgcaccctcgtaaaatttttattttccggtaaacacctttaatagaccattc-aaaaccaaaattttttgaa---- 96  Q
    |||||| |||||||||||||||||| ||||||| ||||||||||||||||||| ||||||| ||||||| |||||| ||||||||||||| |||||        
T  2944 ccctataaaattttcggtttgattttcaccctcataaaatttttattttccggaaaacacccttaataggccattcaaaaaccaaaatttcttgaaattt 3043  T
Q  97 ----ctgaaaatgacctattaggggtgtttttcgga 128  Q
        ||||||||| ||||||||||||||||| ||||    
T  3044 ttttctgaaaatggcctattaggggtgttttccgga 3079  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0740; HSP #2
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 9 - 76
Target Start/End: Complemental strand, 3120 - 3053
Alignment:
Q  9 aaattttcggtttgatttgcaccctcgtaaaatttttattttccggtaaacacctttaatagaccatt 76  Q
    |||||||| |||| |||||||||||||||||||||||||||||||| |||||||  |||||| |||||    
T  3120 aaattttcagtttaatttgcaccctcgtaaaatttttattttccggaaaacacccctaataggccatt 3053  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0199 (Bit Score: 63; Significance: 2e-27; HSPs: 2)
Name: scaffold0199
Description:

Target: scaffold0199; HSP #1
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 4 - 128
Target Start/End: Original strand, 11895 - 12027
Alignment:
Q  4 ctattaaattttcggtttgatttgcaccctcgtaaaatttttattttccggtaaacacctttaatagaccattc-aaaaccaaaattttttgaa------ 96  Q
    |||| |||||||||||||||||||| ||||||||||||||||||||||||| ||||||| ||||||| |||||| ||||||||||||| |||||          
T  11895 ctataaaattttcggtttgatttgcgccctcgtaaaatttttattttccggaaaacacccttaataggccattcaaaaaccaaaatttcttgaaaaaaat 11994  T
Q  97 -ctgaaaatgacctattaggggtgtttttcgga 128  Q
     ||||||||| ||||||| ||||||||| ||||    
T  11995 tctgaaaatggcctattaagggtgttttccgga 12027  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0199; HSP #2
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 1 - 76
Target Start/End: Complemental strand, 12076 - 12001
Alignment:
Q  1 cccctattaaattttcggtttgatttgcaccctcgtaaaatttttattttccggtaaacacctttaatagaccatt 76  Q
    ||||||| |||||||||||||||||||| ||||||||||||||||||||||||| ||||||| ||||||| |||||    
T  12076 cccctataaaattttcggtttgatttgcgccctcgtaaaatttttattttccggaaaacacccttaataggccatt 12001  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0001 (Bit Score: 63; Significance: 2e-27; HSPs: 2)
Name: scaffold0001
Description:

Target: scaffold0001; HSP #1
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 3 - 96
Target Start/End: Complemental strand, 403701 - 403607
Alignment:
Q  3 cctattaaattttcggtttgatttgcaccctcgtaaaatttttattttccggtaaacacctttaatagaccattc-aaaaccaaaattttttgaa 96  Q
    ||||| |||||||||||||||||||||||||||||||||||||||||||| | ||||||| ||||||| |||||| ||||||||||||| |||||    
T  403701 cctataaaattttcggtttgatttgcaccctcgtaaaatttttattttccagaaaacacccttaataggccattcaaaaaccaaaatttcttgaa 403607  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0001; HSP #2
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 3 - 76
Target Start/End: Original strand, 403520 - 403593
Alignment:
Q  3 cctattaaattttcggtttgatttgcaccctcgtaaaatttttattttccggtaaacacctttaatagaccatt 76  Q
    ||||| ||||||| | |||||||||||||||||||||| ||||||||||||| ||||||| ||||||| |||||    
T  403520 cctataaaatttttgatttgatttgcaccctcgtaaaaattttattttccggaaaacacccttaataggccatt 403593  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0035 (Bit Score: 62; Significance: 1e-26; HSPs: 2)
Name: scaffold0035
Description:

Target: scaffold0035; HSP #1
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 1 - 128
Target Start/End: Original strand, 72230 - 72365
Alignment:
Q  1 cccctattaaattttcggtttgatttgcaccctcgtaaaatttttattttccggtaaacacctttaatagacca-ttcaaaaccaaaattttttgaa--- 96  Q
    ||||||| ||||||||||||||||||||||| ||||||||  |||||||||||| ||||||| ||||||| ||| || ||||||||||||| |||||       
T  72230 cccctataaaattttcggtttgatttgcaccatcgtaaaaaatttattttccggaaaacacccttaataggccatttaaaaaccaaaatttcttgaaaaa 72329  T
Q  97 ----ctgaaaatgacctattaggggtgtttttcgga 128  Q
        ||||||||| ||||||||||||||||||||||    
T  72330 aattctgaaaatggcctattaggggtgtttttcgga 72365  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0035; HSP #2
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 4 - 76
Target Start/End: Complemental strand, 72411 - 72339
Alignment:
Q  4 ctattaaattttcggtttgatttgcaccctcgtaaaatttttattttccggtaaacacctttaatagaccatt 76  Q
    |||| |||||||||||||||||||||||||||||||| ||||||||||||  |||||||  |||||| |||||    
T  72411 ctataaaattttcggtttgatttgcaccctcgtaaaaattttattttccgaaaaacacccctaataggccatt 72339  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0090 (Bit Score: 61; Significance: 4e-26; HSPs: 2)
Name: scaffold0090
Description:

Target: scaffold0090; HSP #1
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 1 - 81
Target Start/End: Original strand, 15416 - 15496
Alignment:
Q  1 cccctattaaattttcggtttgatttgcaccctcgtaaaatttttattttccggtaaacacctttaatagaccattcaaaa 81  Q
    ||||||| |||||||||||||||||||||||||||||||||||||||||||||  ||||||| ||||||| ||||||||||    
T  15416 cccctataaaattttcggtttgatttgcaccctcgtaaaatttttattttccgaaaaacacccttaataggccattcaaaa 15496  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0090; HSP #2
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 9 - 76
Target Start/End: Complemental strand, 15593 - 15526
Alignment:
Q  9 aaattttcggtttgatttgcaccctcgtaaaatttttattttccggtaaacacctttaatagaccatt 76  Q
    |||||||||||||||||||||||||| ||||||||||||||||||| |||||||  |||||| |||||    
T  15593 aaattttcggtttgatttgcaccctcataaaatttttattttccggaaaacacccctaataggccatt 15526  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0023 (Bit Score: 59; Significance: 6e-25; HSPs: 2)
Name: scaffold0023
Description:

Target: scaffold0023; HSP #1
Raw Score: 59; E-Value: 6e-25
Query Start/End: Original strand, 1 - 90
Target Start/End: Complemental strand, 125550 - 125460
Alignment:
Q  1 cccctattaaattttcggtttgatttgcaccctcgtaaaatttttattttccggtaaacacctttaatagaccattc-aaaaccaaaattt 90  Q
    ||||||| |||||||||||||||||||||||||||||||| ||||||||| ||| ||||||| ||||||| |||||| |||||||||||||    
T  125550 cccctataaaattttcggtttgatttgcaccctcgtaaaaattttatttttcggaaaacacccttaataggccattcaaaaaccaaaattt 125460  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0023; HSP #2
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 1 - 40
Target Start/End: Original strand, 125366 - 125405
Alignment:
Q  1 cccctattaaattttcggtttgatttgcaccctcgtaaaa 40  Q
    ||||||| ||||||||||||||||||||||||||||||||    
T  125366 cccctataaaattttcggtttgatttgcaccctcgtaaaa 125405  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0235 (Bit Score: 58; Significance: 2e-24; HSPs: 3)
Name: scaffold0235
Description:

Target: scaffold0235; HSP #1
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 3 - 128
Target Start/End: Original strand, 24243 - 24377
Alignment:
Q  3 cctattaaattttcggtttgatttgcaccctcgtaaaatttttattttccggtaaacacctttaatagaccattc-aaaaccaaaattttttgaa----- 96  Q
    ||||| ||||||| ||||||||||||||||||||||| |||||||||||| | ||||||| ||||||| |||||| ||||||||||||| |||||         
T  24243 cctataaaatttttggtttgatttgcaccctcgtaaattttttattttccagaaaacacccttaataggccattcaaaaaccaaaatttcttgaaaaaaa 24342  T
Q  97 ---ctgaaaatgacctattaggggtgtttttcgga 128  Q
       ||||||||| ||||||||||||||||| ||||    
T  24343 attctgaaaatggcctattaggggtgttttccgga 24377  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0235; HSP #2
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 3 - 76
Target Start/End: Complemental strand, 12722 - 12649
Alignment:
Q  3 cctattaaattttcggtttgatttgcaccctcgtaaaatttttattttccggtaaacacctttaatagaccatt 76  Q
    ||||| |||||||||||||||||||||||||||||||| ||||||||||||| |||||||  |||||| |||||    
T  12722 cctataaaattttcggtttgatttgcaccctcgtaaaaattttattttccggaaaacacccctaataggccatt 12649  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0235; HSP #3
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 3 - 76
Target Start/End: Complemental strand, 24424 - 24351
Alignment:
Q  3 cctattaaattttcggtttgatttgcaccctcgtaaaatttttattttccggtaaacacctttaatagaccatt 76  Q
    ||||| |||||||||||||||||||||||||||||||| ||||||||||||| |||||||  |||||| |||||    
T  24424 cctataaaattttcggtttgatttgcaccctcgtaaaaattttattttccggaaaacacccctaataggccatt 24351  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0734 (Bit Score: 57; Significance: 9e-24; HSPs: 2)
Name: scaffold0734
Description:

Target: scaffold0734; HSP #1
Raw Score: 57; E-Value: 9e-24
Query Start/End: Original strand, 1 - 96
Target Start/End: Original strand, 3021 - 3117
Alignment:
Q  1 cccctattaaattttcggtttgatttgcaccctcgtaaaatttttattttccggtaaacacctttaatagaccattc-aaaaccaaaattttttgaa 96  Q
    ||||||| ||||||| |||||||||||||||||||||||| ||||||||||||  ||||||| ||||||| |||||| ||||||||||||| |||||    
T  3021 cccctataaaatttttggtttgatttgcaccctcgtaaaaattttattttccgaaaaacacccttaataggccattcaaaaaccaaaatttcttgaa 3117  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0734; HSP #2
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 1 - 76
Target Start/End: Complemental strand, 3206 - 3131
Alignment:
Q  1 cccctattaaattttcggtttgatttgcaccctcgtaaaatttttattttccggtaaacacctttaatagaccatt 76  Q
    ||||||| |||||||||||||||||||||||||||||||| ||||||||||||| ||||||| ||||||| |||||    
T  3206 cccctataaaattttcggtttgatttgcaccctcgtaaaaattttattttccggaaaacacccttaataggccatt 3131  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0116 (Bit Score: 57; Significance: 9e-24; HSPs: 2)
Name: scaffold0116
Description:

Target: scaffold0116; HSP #1
Raw Score: 57; E-Value: 9e-24
Query Start/End: Original strand, 1 - 96
Target Start/End: Original strand, 5210 - 5306
Alignment:
Q  1 cccctattaaattttcggtttgatttgcaccctcgtaaaatttttattttccggtaaacacctttaatagaccattc-aaaaccaaaattttttgaa 96  Q
    ||||||| ||||||||| ||||||||||||||||||||| |||||||||||||| ||||||| |||||||  ||||| ||||||||||||| |||||    
T  5210 cccctataaaattttcgatttgatttgcaccctcgtaaattttttattttccggaaaacacccttaatagggcattcaaaaaccaaaatttcttgaa 5306  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0116; HSP #2
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 9 - 53
Target Start/End: Complemental strand, 5389 - 5344
Alignment:
Q  9 aaattttcggtttgatttgcaccctcgtaaaatt-tttattttccg 53  Q
    ||||||||||||||||||||||||| |||||||| |||||||||||    
T  5389 aaattttcggtttgatttgcacccttgtaaaattatttattttccg 5344  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0148 (Bit Score: 53; Significance: 2e-21; HSPs: 2)
Name: scaffold0148
Description:

Target: scaffold0148; HSP #1
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 9 - 96
Target Start/End: Complemental strand, 24656 - 24568
Alignment:
Q  9 aaattttcggtttgatttgcaccctcgtaaaatttttattttccggtaaacacctttaatagaccattc-aaaaccaaaattttttgaa 96  Q
    |||||||||||||||| | ||||||||||||||||||||||| ||| ||||||| ||||||| |||||| ||||||||||||| |||||    
T  24656 aaattttcggtttgatattcaccctcgtaaaatttttatttttcggaaaacacccttaataggccattcaaaaaccaaaatttcttgaa 24568  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0148; HSP #2
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 3 - 62
Target Start/End: Original strand, 24480 - 24538
Alignment:
Q  3 cctattaaattttcggtttgatttgcaccctcgtaaaatttttattttccggtaaacacc 62  Q
    ||||| ||||||| ||||||||||||||||| || ||||||||||||||||| |||||||    
T  24480 cctataaaatttttggtttgatttgcacccttgt-aaatttttattttccggaaaacacc 24538  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0098 (Bit Score: 53; Significance: 2e-21; HSPs: 2)
Name: scaffold0098
Description:

Target: scaffold0098; HSP #1
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 1 - 81
Target Start/End: Original strand, 4011 - 4091
Alignment:
Q  1 cccctattaaattttcggtttgatttgcaccctcgtaaaatttttattttccggtaaacacctttaatagaccattcaaaa 81  Q
    ||||||| |||||||||||||||||||||||||||||||| |||||||| |||| ||||||| | ||||| ||||||||||    
T  4011 cccctataaaattttcggtttgatttgcaccctcgtaaaaattttatttgccggaaaacaccctcaataggccattcaaaa 4091  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0098; HSP #2
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 1 - 76
Target Start/End: Complemental strand, 4195 - 4120
Alignment:
Q  1 cccctattaaattttcggtttgatttgcaccctcgtaaaatttttattttccggtaaacacctttaatagaccatt 76  Q
    ||||||| ||||||||||||||||||||||||||||||| ||||||||||| || ||||||| ||| ||| |||||    
T  4195 cccctataaaattttcggtttgatttgcaccctcgtaaattttttattttctggaaaacacccttagtaggccatt 4120  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0555 (Bit Score: 51; Significance: 4e-20; HSPs: 2)
Name: scaffold0555
Description:

Target: scaffold0555; HSP #1
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 1 - 123
Target Start/End: Original strand, 6735 - 6866
Alignment:
Q  1 cccctattaaattttcggtttgatttgcaccctcgtaaaatttttattttccggtaaacacctttaatagaccattc-aaaaccaaaattttttgaa--- 96  Q
    ||||||| ||||||||||||||||||||||||||||||||  |||||||||| | ||||||| |||||||  ||||| |||||||||| || |||||       
T  6735 cccctataaaattttcggtttgatttgcaccctcgtaaaaaatttattttccagaaaacacccttaataggtcattcaaaaaccaaaaattcttgaaaaa 6834  T
Q  97 -----ctgaaaatgacctattaggggtgtttt 123  Q
         ||||||||| |||||||||||||||||    
T  6835 aaattctgaaaatggcctattaggggtgtttt 6866  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0555; HSP #2
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 2 - 76
Target Start/End: Complemental strand, 6919 - 6845
Alignment:
Q  2 ccctattaaattttcggtttgatttgcaccctcgtaaaatttttattttccggtaaacacctttaatagaccatt 76  Q
    |||||| |||||||| |||||| |||||||||||||||| ||||||||||| | |||||||  |||||| |||||    
T  6919 ccctataaaattttctgtttgaattgcaccctcgtaaaaattttattttccagaaaacacccctaataggccatt 6845  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0352 (Bit Score: 51; Significance: 4e-20; HSPs: 2)
Name: scaffold0352
Description:

Target: scaffold0352; HSP #1
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 11 - 123
Target Start/End: Complemental strand, 9802 - 9691
Alignment:
Q  11 attttcggtttgatttgcaccctcgtaaaatttttattttccggtaaacacctttaatagaccattc-aaaaccaaaattttttgaactgaaaatgacct 109  Q
    |||||||||||||||| ||||||| ||||||||||||||||||  |||||||  |||||| | |||| ||||||||||||| |||||   ||||||||||    
T  9802 attttcggtttgattttcaccctcataaaatttttattttccgaaaaacacccataataggctattcaaaaaccaaaatttcttgaa--aaaaatgacct 9705  T
Q  110 attaggggtgtttt 123  Q
    |||||| |||||||    
T  9704 attaggagtgtttt 9691  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0352; HSP #2
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 1 - 61
Target Start/End: Original strand, 9637 - 9697
Alignment:
Q  1 cccctattaaattttcggtttgatttgcaccctcgtaaaatttttattttccggtaaacac 61  Q
    ||||||| ||||||||  ||||||||| ||||||||||||||||||||||| || ||||||    
T  9637 cccctataaaattttcaatttgatttgtaccctcgtaaaatttttattttctggaaaacac 9697  T

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Target: scaffold0043 (Bit Score: 49; Significance: 6e-19; HSPs: 1)
Name: scaffold0043
Description:

Target: scaffold0043; HSP #1
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 1 - 96
Target Start/End: Original strand, 47120 - 47216
Alignment:
Q  1 cccctattaaattttcggtttgatttgcaccctcgtaaaatttttattttccggtaaacacctttaatagaccattc-aaaaccaaaattttttgaa 96  Q
    ||||||| |||||||| ||||||||||| ||||  ||||||||||||||||| | ||||||| ||||||| |||||| ||||||||||||| |||||    
T  47120 cccctataaaattttcagtttgatttgcgccctgataaaatttttattttccagaaaacacccttaataggccattcaaaaaccaaaatttcttgaa 47216  T

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Target: scaffold0009 (Bit Score: 48; Significance: 2e-18; HSPs: 4)
Name: scaffold0009
Description:

Target: scaffold0009; HSP #1
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 2 - 96
Target Start/End: Complemental strand, 7570 - 7475
Alignment:
Q  2 ccctattaaattttcggtttgatttgcaccctcgtaaaatttttattttccggtaaacacctttaatagaccattc-aaaaccaaaattttttgaa 96  Q
    |||||| |||||||||||||||||||||||||||||||||||||||||| | | |||||   |||||||  ||||| ||||||||||||| |||||    
T  7570 ccctataaaattttcggtttgatttgcaccctcgtaaaatttttatttttcagaaaacattcttaataggtcattcaaaaaccaaaatttcttgaa 7475  T

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Target: scaffold0009; HSP #2
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 9 - 76
Target Start/End: Original strand, 7394 - 7461
Alignment:
Q  9 aaattttcggtttgatttgcaccctcgtaaaatttttattttccggtaaacacctttaatagaccatt 76  Q
    ||||||| |||||||||||||| ||| ||||||||||||||| ||| |||||||| |||||| |||||    
T  7394 aaatttttggtttgatttgcactctcctaaaatttttatttttcggaaaacacctctaataggccatt 7461  T

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Target: scaffold0009; HSP #3
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 1 - 76
Target Start/End: Complemental strand, 25000 - 24924
Alignment:
Q  1 cccctattaaattttcggtttgatttgcaccctcgtaaaatt-tttattttccggtaaacacctttaatagaccatt 76  Q
    ||||||| ||||||||||||||||||||||||||||||| || ||| |||||| | |||||||  |||||| |||||    
T  25000 cccctataaaattttcggtttgatttgcaccctcgtaaatttattttttttccagaaaacacccctaataggccatt 24924  T

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Target: scaffold0009; HSP #4
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 2 - 90
Target Start/End: Original strand, 24814 - 24904
Alignment:
Q  2 ccctattaaattttcggtttgatttgcaccctcgtaaaatttttattt-tccggtaaacacctttaatagaccattc-aaaaccaaaattt 90  Q
    |||||| ||||||||||||||||||| || |||||||| ||||| ||| | | | ||| ||| ||||||| |||||| |||||||||||||    
T  24814 ccctataaaattttcggtttgatttgaactctcgtaaattttttttttcttcagaaaatacccttaataggccattcaaaaaccaaaattt 24904  T

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Target: scaffold0559 (Bit Score: 47; Significance: 9e-18; HSPs: 1)
Name: scaffold0559
Description:

Target: scaffold0559; HSP #1
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 2 - 90
Target Start/End: Original strand, 3248 - 3338
Alignment:
Q  2 ccctattaaattttcggtttgatttgcaccctcgtaaaa-tttttattttccggtaaacacctttaatagaccattcaaaa-ccaaaattt 90  Q
    |||||| |||||||| ||||||||||||||||||||||| |||||||||||  | ||||||| ||||||| |||||||||| |||||||||    
T  3248 ccctataaaattttcagtttgatttgcaccctcgtaaaattttttattttctagaaaacacccttaataggccattcaaaagccaaaattt 3338  T

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Target: scaffold0019 (Bit Score: 46; Significance: 3e-17; HSPs: 1)
Name: scaffold0019
Description:

Target: scaffold0019; HSP #1
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 1 - 62
Target Start/End: Original strand, 142306 - 142367
Alignment:
Q  1 cccctattaaattttcggtttgatttgcaccctcgtaaaatttttattttccggtaaacacc 62  Q
    ||||||| ||||||| |||||||||||||||||||||||||||||||||||| | |||||||    
T  142306 cccctataaaatttttggtttgatttgcaccctcgtaaaatttttattttccagaaaacacc 142367  T

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Target: scaffold0284 (Bit Score: 44; Significance: 5e-16; HSPs: 2)
Name: scaffold0284
Description:

Target: scaffold0284; HSP #1
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 1 - 76
Target Start/End: Original strand, 3413 - 3488
Alignment:
Q  1 cccctattaaattttcggtttgatttgcaccctcgtaaaatttttattttccggtaaacacctttaatagaccatt 76  Q
    ||||||| |||||||||||||||||||||||  ||||||| ||||||||||||| |||||||  |||||| |||||    
T  3413 cccctataaaattttcggtttgatttgcaccaacgtaaaaattttattttccggaaaacacccctaataggccatt 3488  T

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Target: scaffold0284; HSP #2
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 1 - 44
Target Start/End: Complemental strand, 3543 - 3500
Alignment:
Q  1 cccctattaaattttcggtttgatttgcaccctcgtaaaatttt 44  Q
    ||||||| ||||||||||||||||||||||||||||||||||||    
T  3543 cccctataaaattttcggtttgatttgcaccctcgtaaaatttt 3500  T

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Target: scaffold0037 (Bit Score: 42; Significance: 0.000000000000008; HSPs: 2)
Name: scaffold0037
Description:

Target: scaffold0037; HSP #1
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 1 - 54
Target Start/End: Complemental strand, 96679 - 96626
Alignment:
Q  1 cccctattaaattttcggtttgatttgcaccctcgtaaaatttttattttccgg 54  Q
    ||||||| |||| |||||||||||||||||||| ||||||||||||||||||||    
T  96679 cccctataaaatcttcggtttgatttgcaccctggtaaaatttttattttccgg 96626  T

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Target: scaffold0037; HSP #2
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 1 - 40
Target Start/End: Original strand, 96513 - 96552
Alignment:
Q  1 cccctattaaattttcggtttgatttgcaccctcgtaaaa 40  Q
    ||||||| ||||||||||||||||||||||||||||||||    
T  96513 cccctataaaattttcggtttgatttgcaccctcgtaaaa 96552  T

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Target: scaffold0003 (Bit Score: 42; Significance: 0.000000000000008; HSPs: 1)
Name: scaffold0003
Description:

Target: scaffold0003; HSP #1
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 1 - 62
Target Start/End: Complemental strand, 250039 - 249978
Alignment:
Q  1 cccctattaaattttcggtttgatttgcaccctcgtaaaatttttattttccggtaaacacc 62  Q
    ||||||| |||||||||||||||||||| ||||||||||| ||||||||| ||| |||||||    
T  250039 cccctataaaattttcggtttgatttgctccctcgtaaaaattttatttttcggaaaacacc 249978  T

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Target: scaffold0021 (Bit Score: 38; Significance: 0.000000000002; HSPs: 1)
Name: scaffold0021
Description:

Target: scaffold0021; HSP #1
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 9 - 62
Target Start/End: Original strand, 23954 - 24007
Alignment:
Q  9 aaattttcggtttgatttgcaccctcgtaaaatttttattttccggtaaacacc 62  Q
    ||||||| ||||||||||||||||||||||||  |||||||||||| |||||||    
T  23954 aaatttttggtttgatttgcaccctcgtaaaaaatttattttccggaaaacacc 24007  T

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Target: scaffold0809 (Bit Score: 37; Significance: 0.000000000008; HSPs: 1)
Name: scaffold0809
Description:

Target: scaffold0809; HSP #1
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 9 - 96
Target Start/End: Original strand, 1862 - 1950
Alignment:
Q  9 aaattttcggtttgatttgcaccctcgtaaaatttttattttccggtaaacacctttaatagaccattc-aaaaccaaaattttttgaa 96  Q
    ||||||||| ||||||||||||||| ||||||   ||||||||||  ||||||| ||||||  |||||| ||||||||||||| |||||    
T  1862 aaattttcgatttgatttgcacccttgtaaaaaaattattttccgaaaaacacccttaatatgccattcaaaaaccaaaatttcttgaa 1950  T

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Target: scaffold0038 (Bit Score: 35; Significance: 0.0000000001; HSPs: 1)
Name: scaffold0038
Description:

Target: scaffold0038; HSP #1
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 9 - 90
Target Start/End: Original strand, 29158 - 29240
Alignment:
Q  9 aaattttcggtttgatttgcaccctcgtaaaatttttattttccggtaaacacctttaatagaccattc-aaaaccaaaattt 90  Q
    ||||||||||||||||||||||||||||||||  |  |  | |||| ||||||| ||||||| |||||| |||||||||||||    
T  29158 aaattttcggtttgatttgcaccctcgtaaaaaataaaaataccggaaaacacccttaataggccattcaaaaaccaaaattt 29240  T

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Target: scaffold0473 (Bit Score: 30; Significance: 0.0000001; HSPs: 1)
Name: scaffold0473
Description:

Target: scaffold0473; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 9 - 96
Target Start/End: Original strand, 1682 - 1764
Alignment:
Q  9 aaattttcggtttgatttgcaccctcgtaaaatttttattttccggtaaacacctttaatagaccattc-aaaaccaaaattttttgaa 96  Q
    ||||||||||||||||||      ||||||||| |||||||||||| ||||||  |||| || |||||| ||||||||||||| |||||    
T  1682 aaattttcggtttgattt------tcgtaaaatatttattttccggaaaacactcttaacaggccattcaaaaaccaaaatttcttgaa 1764  T

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