View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF10187_low_23 (Length: 342)
Name: NF10187_low_23
Description: NF10187
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF10187_low_23 |
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Alignment Details
Target: chr7 (Bit Score: 201; Significance: 1e-109; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 201; E-Value: 1e-109
Query Start/End: Original strand, 1 - 326
Target Start/End: Complemental strand, 7685711 - 7685386
Alignment:
| Q |
1 |
aagaaaacaatcggaatatatccaaactaaatatggttttttatggtttcagcttcgatttgttcaatttgaaannnnnnnattgaattggttcggtttc |
100 |
Q |
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| T |
7685711 |
aagaaaatgatcggaatatatccaaactaaatgtggttttttgtggtttcagattggatttgttcaatttgagatttttctattgaattggtttggtttt |
7685612 |
T |
|
| Q |
101 |
gaacgccctaacgttgt------atgctgccgcaagaaagtctgcagatacaagatgagtttttacagcttgttctcgacgaaatcgaaggaggacctca |
194 |
Q |
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||||||||||| ||| | ||||||||||| |||| | ||||||||||||||||||||||||||||||||||||||||||||||||||| |||||| |
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| T |
7685611 |
gaacgccctaatgttatctacttatgctgccgcatgaaaatttgcagatacaagatgagtttttacagcttgttctcgacgaaatcgaaggagaacctca |
7685512 |
T |
|
| Q |
195 |
ctttggttgactccttcttcaccgtcaccgatatggtggtatgttaatagctgtcataaaaggtagaacattagcacaatatttcaagttttccttttag |
294 |
Q |
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|||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||| |
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| T |
7685511 |
ctttggttgactccttcttcaccg------atatggtggtatgttaatagctgtcataaaaggtagaacattagcacaataattcaagttttccttttag |
7685418 |
T |
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| Q |
295 |
tttccaaaatatatatcctcacgtccaaggtg |
326 |
Q |
| |
|
|||||||||||||||||||||||||||||||| |
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| T |
7685417 |
tttccaaaatatatatcctcacgtccaaggtg |
7685386 |
T |
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