View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF10187_low_25 (Length: 339)
Name: NF10187_low_25
Description: NF10187
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF10187_low_25 |
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Alignment Details
Target: chr4 (Bit Score: 308; Significance: 1e-173; HSPs: 1)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 308; E-Value: 1e-173
Query Start/End: Original strand, 18 - 325
Target Start/End: Original strand, 45810165 - 45810472
Alignment:
| Q |
18 |
tttgagtgctttgaaaaactgttttgtcaaaccaaacacagttagaatagagtgcaacttcttgcacaaataatatatactcgagttggaaaataagaaa |
117 |
Q |
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| T |
45810165 |
tttgagtgctttgaaaaactgttttgtcaaaccaaacacagttagaatagagtgcaacttcttgcacaaataatatatactcgagttggaaaataagaaa |
45810264 |
T |
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| Q |
118 |
taattattattgggaaattgaatgtgaagtgcatcccaaggaaattctcacgaacttttctagcttctaatttttaaatactactagtatatattttgaa |
217 |
Q |
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| T |
45810265 |
taattattattgggaaattgaatgtgaagtgcatcccaaggaaattctcacgaacttttctagcttctaatttttaaatactactagtatatattttgaa |
45810364 |
T |
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| Q |
218 |
tgatccaagaaaccccatcagtgagaaagtttccactagtatatactaatactattattgtttaggagtactattcaaacacctaaacattgagtagtgt |
317 |
Q |
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| T |
45810365 |
tgatccaagaaaccccatcagtgagaaagtttccactagtatatactaatactattattgtttaggagtactattcaaacacctaaacattgagtagtgt |
45810464 |
T |
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| Q |
318 |
ctctagtc |
325 |
Q |
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|||||||| |
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| T |
45810465 |
ctctagtc |
45810472 |
T |
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