View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF10187_low_32 (Length: 302)
Name: NF10187_low_32
Description: NF10187
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF10187_low_32 |
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| [»] chr8 (1 HSPs) |
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Alignment Details
Target: chr8 (Bit Score: 302; Significance: 1e-170; HSPs: 1)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 302; E-Value: 1e-170
Query Start/End: Original strand, 1 - 302
Target Start/End: Original strand, 36536962 - 36537263
Alignment:
| Q |
1 |
atgtggcggttcaatgattcttttggtttgttttgtggttggattccaaaggaaaagggttgagtattggtctaaggaataatgagcaatacaaaataaa |
100 |
Q |
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| T |
36536962 |
atgtggcggttcaatgattcttttggtttgttttgtggttggattccaaaggaaaagggttgagtattggtctaaggaataatgagcaatacaaaataaa |
36537061 |
T |
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| Q |
101 |
ccattgcatgaagctatgatcttataacccatatcagaatttgtaactcttggaatatgaagctctttgagatgttttgttttggtatctagaagaaata |
200 |
Q |
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| T |
36537062 |
ccattgcatgaagctatgatcttataacccatatcagaatttgtaactcttggaatatgaagctctttgagatgttttgttttggtatctagaagaaata |
36537161 |
T |
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| Q |
201 |
ggtgttggccacatacattgttatctttgtagtaaaagcgatcaaggattagaagtgagtttgttttggtggagaaaagaaagtgttttggagcttcaac |
300 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
36537162 |
ggtgttggccacatacattgttatctttgtagtaaaagcgatcaaggattagaagtgagtttgttttggtggagaaaagaaagtgttttggagcttcaac |
36537261 |
T |
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| Q |
301 |
ta |
302 |
Q |
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|| |
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| T |
36537262 |
ta |
36537263 |
T |
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