View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF10187_low_42 (Length: 265)

Name: NF10187_low_42
Description: NF10187
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF10187_low_42
NF10187_low_42
[»] chr5 (9 HSPs)
chr5 (1-142)||(35779311-35779452)
chr5 (188-252)||(35779504-35779568)
chr5 (40-111)||(9049390-9049461)
chr5 (40-111)||(13239800-13239871)
chr5 (50-112)||(16137074-16137137)
chr5 (33-84)||(28277528-28277579)
chr5 (40-111)||(28278365-28278436)
chr5 (58-111)||(16135490-16135544)
chr5 (40-94)||(42310000-42310054)
[»] chr2 (5 HSPs)
chr2 (38-86)||(4561135-4561183)
chr2 (40-111)||(24398106-24398178)
chr2 (40-111)||(45726978-45727049)
chr2 (50-111)||(5723304-5723365)
chr2 (40-112)||(7815320-7815392)
[»] chr8 (4 HSPs)
chr8 (51-111)||(3073921-3073981)
chr8 (40-111)||(12702682-12702753)
chr8 (40-111)||(15212835-15212906)
chr8 (50-111)||(34254379-34254440)
[»] chr7 (4 HSPs)
chr7 (40-111)||(23555089-23555160)
chr7 (40-111)||(5116653-5116725)
chr7 (39-111)||(34310764-34310836)
chr7 (52-103)||(38280867-38280919)
[»] chr4 (6 HSPs)
chr4 (40-111)||(27417013-27417084)
chr4 (40-111)||(40632494-40632565)
chr4 (40-111)||(56178685-56178756)
chr4 (40-110)||(4588008-4588078)
chr4 (40-111)||(26699490-26699562)
chr4 (40-84)||(44570441-44570485)
[»] chr3 (3 HSPs)
chr3 (40-111)||(7762314-7762385)
chr3 (40-111)||(30236174-30236245)
chr3 (40-112)||(51398863-51398935)
[»] chr1 (3 HSPs)
chr1 (40-111)||(31659287-31659358)
chr1 (43-84)||(1050519-1050560)
chr1 (51-83)||(48260373-48260405)
[»] scaffold0219 (1 HSPs)
scaffold0219 (40-111)||(27490-27562)
[»] scaffold0053 (1 HSPs)
scaffold0053 (40-84)||(25102-25146)


Alignment Details
Target: chr5 (Bit Score: 138; Significance: 3e-72; HSPs: 9)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 138; E-Value: 3e-72
Query Start/End: Original strand, 1 - 142
Target Start/End: Original strand, 35779311 - 35779452
Alignment:
Q  1 cacaagaagaggtgcaaagagtaaacatacaagttgttattgttgaagataatttcttgtaacattttggtttctctttgtaaaaacttattgacaatga 100  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||    
T  35779311 cacaagaagaggtgcaaagagtaaacatacaagttgttattgttgaagataatttcttgtaacattttggtttctctttgtaaaaatttattgacaatga 35779410  T
Q  101 attggagagattcctcttttgcgatgtggatcaaatttgggc 142  Q
    ||||||||||||||||||||||||||||||||||||||||||    
T  35779411 attggagagattcctcttttgcgatgtggatcaaatttgggc 35779452  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 188 - 252
Target Start/End: Original strand, 35779504 - 35779568
Alignment:
Q  188 tattgtcatatttttctttattctcctttatcgtgtagttttgtcttcgcttgtttgatcacctt 252  Q
    |||||||||||||||||||||||||||||||||||| |||||||||| |||||||||||||||||    
T  35779504 tattgtcatatttttctttattctcctttatcgtgttgttttgtctttgcttgtttgatcacctt 35779568  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 40 - 111
Target Start/End: Complemental strand, 9049461 - 9049390
Alignment:
Q  40 ttgttgaagataatttcttgtaacattttggtttctctttgtaaaaacttattgacaatgaattggagagat 111  Q
    ||||||||| ||||||||||||||  ||| || ||||||||||| |||| ||||||| || |||||||||||    
T  9049461 ttgttgaagctaatttcttgtaaccattttgtatctctttgtaagaactcattgacagtggattggagagat 9049390  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 40 - 111
Target Start/End: Original strand, 13239800 - 13239871
Alignment:
Q  40 ttgttgaagataatttcttgtaacattttggtttctctttgtaaaaacttattgacaatgaattggagagat 111  Q
    ||||||||| ||||||||||||||  ||| || ||||||||||| |||| ||||| | || |||||||||||    
T  13239800 ttgttgaagctaatttcttgtaactcttttgtatctctttgtaagaactcattgatagtggattggagagat 13239871  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 50 - 112
Target Start/End: Original strand, 16137074 - 16137137
Alignment:
Q  50 taatttcttgtaacattttggtttctctttgtaaa-aacttattgacaatgaattggagagatt 112  Q
    |||||||||||||| |||||||||||||||| ||| |||| ||||| | |||||| ||||||||    
T  16137074 taatttcttgtaaccttttggtttctctttgaaaacaactcattgatagtgaatttgagagatt 16137137  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 33 - 84
Target Start/End: Original strand, 28277528 - 28277579
Alignment:
Q  33 gttgttattgttgaagataatttcttgtaacattttggtttctctttgtaaa 84  Q
    |||||||||||| | | ||||||||| |||||||||||||||||||| ||||    
T  28277528 gttgttattgttaaggttaatttcttataacattttggtttctctttctaaa 28277579  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 40 - 111
Target Start/End: Original strand, 28278365 - 28278436
Alignment:
Q  40 ttgttgaagataatttcttgtaacattttggtttctctttgtaaaaacttattgacaatgaattggagagat 111  Q
    ||||||||| ||||||||||||||   || || |||||||||||||||| ||||| | || |||||||||||    
T  28278365 ttgttgaagctaatttcttgtaacccatttgtatctctttgtaaaaactcattgatagtggattggagagat 28278436  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 58 - 111
Target Start/End: Original strand, 16135490 - 16135544
Alignment:
Q  58 tgtaacattttggtttctctttgtaaa-aacttattgacaatgaattggagagat 111  Q
    |||||| |||||||||||||||||||| |||| ||| | ||||||||||||||||    
T  16135490 tgtaaccttttggtttctctttgtaaataactcattcataatgaattggagagat 16135544  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 40 - 94
Target Start/End: Complemental strand, 42310054 - 42310000
Alignment:
Q  40 ttgttgaagataatttcttgtaacattttggtttctctttgtaaaaacttattga 94  Q
    ||||||||| ||||||||||||||  ||| || ||||||||||| ||||||||||    
T  42310054 ttgttgaagctaatttcttgtaactcttttgtatctctttgtaagaacttattga 42310000  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 37; Significance: 0.000000000006; HSPs: 5)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 38 - 86
Target Start/End: Original strand, 4561135 - 4561183
Alignment:
Q  38 tattgttgaagataatttcttgtaacattttggtttctctttgtaaaaa 86  Q
    ||||||||||| ||||||||||||||||||| || ||||||||||||||    
T  4561135 tattgttgaagctaatttcttgtaacatttttgtatctctttgtaaaaa 4561183  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 40 - 111
Target Start/End: Original strand, 24398106 - 24398178
Alignment:
Q  40 ttgttgaagataatttcttgtaacattttggtttctctttgtaaa-aacttattgacaatgaattggagagat 111  Q
    ||||||||| ||||||||||||||  ||| || |||||||||||| |||| ||||| |||| |||||||||||    
T  24398106 ttgttgaagctaatttcttgtaacccttttgtatctctttgtaaagaactcattgataatggattggagagat 24398178  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 40 - 111
Target Start/End: Original strand, 45726978 - 45727049
Alignment:
Q  40 ttgttgaagataatttcttgtaacattttggtttctctttgtaaaaacttattgacaatgaattggagagat 111  Q
    ||||||||| |||||||||||||| | || || ||||||||||| |||| ||||| | || |||||||||||    
T  45726978 ttgttgaagctaatttcttgtaacctatttgtatctctttgtaagaactcattgatagtggattggagagat 45727049  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 50 - 111
Target Start/End: Complemental strand, 5723365 - 5723304
Alignment:
Q  50 taatttcttgtaacattttggtttctctttgtaaaaacttattgacaatgaattggagagat 111  Q
    |||||||||||||| |||| || ||||||||||| |||| ||||| | || |||||||||||    
T  5723365 taatttcttgtaacctttttgtatctctttgtaagaactcattgatagtggattggagagat 5723304  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 40 - 112
Target Start/End: Complemental strand, 7815392 - 7815320
Alignment:
Q  40 ttgttgaagataatttcttgtaacattttggtttctctttgtaaaaacttattgacaatgaattggagagatt 112  Q
    ||||||||| ||||||||||||||  ||| || ||||||||||| |||| ||| | | || ||||||||||||    
T  7815392 ttgttgaagctaatttcttgtaactcttttgtatctctttgtaagaactcatttatagtggattggagagatt 7815320  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 33; Significance: 0.000000001; HSPs: 4)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 51 - 111
Target Start/End: Complemental strand, 3073981 - 3073921
Alignment:
Q  51 aatttcttgtaacattttggtttctctttgtaaaaacttattgacaatgaattggagagat 111  Q
    |||||||||||||||||| || ||||||||||| |||| ||||| ||||  ||||||||||    
T  3073981 aatttcttgtaacatttttgtatctctttgtaagaactcattgataatggcttggagagat 3073921  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 40 - 111
Target Start/End: Complemental strand, 12702753 - 12702682
Alignment:
Q  40 ttgttgaagataatttcttgtaacattttggtttctctttgtaaaaacttattgacaatgaattggagagat 111  Q
    ||||||||| ||||||||||||||  ||| || ||||||||||| |||| ||||| | || |||||||||||    
T  12702753 ttgttgaagctaatttcttgtaacccttttgtgtctctttgtaagaactcattgatattggattggagagat 12702682  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 40 - 111
Target Start/End: Original strand, 15212835 - 15212906
Alignment:
Q  40 ttgttgaagataatttcttgtaacattttggtttctctttgtaaaaacttattgacaatgaattggagagat 111  Q
    ||||||||| ||||||||||||||   || || ||||||||||| |||| ||||| |||| |||||||||||    
T  15212835 ttgttgaagctaatttcttgtaacccatttgtatctctttgtaagaactcattgataatggattggagagat 15212906  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 50 - 111
Target Start/End: Complemental strand, 34254440 - 34254379
Alignment:
Q  50 taatttcttgtaacattttggtttctctttgtaaaaacttattgacaatgaattggagagat 111  Q
    ||||||||||||||  ||| || ||||||||||| |||||||||| | || |||||||||||    
T  34254440 taatttcttgtaacccttttgtatctctttgtaagaacttattgatagtggattggagagat 34254379  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 32; Significance: 0.000000006; HSPs: 4)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 40 - 111
Target Start/End: Original strand, 23555089 - 23555160
Alignment:
Q  40 ttgttgaagataatttcttgtaacattttggtttctctttgtaaaaacttattgacaatgaattggagagat 111  Q
    ||||||||| ||||||||||||||| ||| ||  |||||||||| |||| ||||| | || |||||||||||    
T  23555089 ttgttgaagctaatttcttgtaacacttttgtacctctttgtaagaactcattgatagtggattggagagat 23555160  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 40 - 111
Target Start/End: Original strand, 5116653 - 5116725
Alignment:
Q  40 ttgttgaagataatttcttgtaacattttggtttctctttgtaaa-aacttattgacaatgaattggagagat 111  Q
    |||||||||||||||| ||||||   ||| || |||||||||||| |||| ||||| | ||||||||||||||    
T  5116653 ttgttgaagataatttattgtaaaccttttgtatctctttgtaaagaactcattgatagtgaattggagagat 5116725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 39 - 111
Target Start/End: Complemental strand, 34310836 - 34310764
Alignment:
Q  39 attgttgaagataatttcttgtaacattttggtttctctttgtaaaaacttattgacaatgaattggagagat 111  Q
    |||||||||| |||||||||||||||  || || ||| ||||||| |||| ||||| | || |||||||||||    
T  34310836 attgttgaagctaatttcttgtaacacatttgtatctttttgtaagaactcattgatagtggattggagagat 34310764  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 52 - 103
Target Start/End: Original strand, 38280867 - 38280919
Alignment:
Q  52 atttcttgtaacattttggtttctctttgt-aaaaacttattgacaatgaatt 103  Q
    |||||||||||| ||||||||||||||||| || |||| ||||||||| ||||    
T  38280867 atttcttgtaactttttggtttctctttgtgaagaactcattgacaataaatt 38280919  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 32; Significance: 0.000000006; HSPs: 6)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 40 - 111
Target Start/End: Complemental strand, 27417084 - 27417013
Alignment:
Q  40 ttgttgaagataatttcttgtaacattttggtttctctttgtaaaaacttattgacaatgaattggagagat 111  Q
    ||||||||| ||||||||||||||   || || |||||||||||||||| ||||| | || |||||||||||    
T  27417084 ttgttgaagctaatttcttgtaacccatttgtatctctttgtaaaaactcattgatagtggattggagagat 27417013  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 40 - 111
Target Start/End: Original strand, 40632494 - 40632565
Alignment:
Q  40 ttgttgaagataatttcttgtaacattttggtttctctttgtaaaaacttattgacaatgaattggagagat 111  Q
    ||||||||| |||||||||||||| | || || ||||||||||| |||| ||||| | || |||||||||||    
T  40632494 ttgttgaagctaatttcttgtaacctatttgtatctctttgtaagaactcattgatagtggattggagagat 40632565  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 40 - 111
Target Start/End: Complemental strand, 56178756 - 56178685
Alignment:
Q  40 ttgttgaagataatttcttgtaacattttggtttctctttgtaaaaacttattgacaatgaattggagagat 111  Q
    ||||||||| ||||||||||||||  ||| || ||||||||||| |||| ||||| | || |||||||||||    
T  56178756 ttgttgaagctaatttcttgtaacccttttgtatctctttgtaagaactcattgatagtggattggagagat 56178685  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 40 - 110
Target Start/End: Original strand, 4588008 - 4588078
Alignment:
Q  40 ttgttgaagataatttcttgtaacattttggtttctctttgtaaaaacttattgacaatgaattggagaga 110  Q
    ||||||||| ||||||||||||||  ||| || ||||||||||| |||| ||||| | || ||||||||||    
T  4588008 ttgttgaagctaatttcttgtaacccttttgtatctctttgtaagaactcattgatagtggattggagaga 4588078  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 40 - 111
Target Start/End: Complemental strand, 26699562 - 26699490
Alignment:
Q  40 ttgttgaagataatttcttgtaacattttggtttctctttgtaaa-aacttattgacaatgaattggagagat 111  Q
    ||||||||| ||||||||||||||  ||| || |||||||||||| |||| ||| | |||| |||||||||||    
T  26699562 ttgttgaagctaatttcttgtaactcttttgtatctctttgtaaagaactcatttataatggattggagagat 26699490  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 40 - 84
Target Start/End: Complemental strand, 44570485 - 44570441
Alignment:
Q  40 ttgttgaagataatttcttgtaacattttggtttctctttgtaaa 84  Q
    ||||||||  ||||||||||||||||||| || ||||||||||||    
T  44570485 ttgttgaaactaatttcttgtaacatttttgtatctctttgtaaa 44570441  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 32; Significance: 0.000000006; HSPs: 3)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 40 - 111
Target Start/End: Original strand, 7762314 - 7762385
Alignment:
Q  40 ttgttgaagataatttcttgtaacattttggtttctctttgtaaaaacttattgacaatgaattggagagat 111  Q
    ||||||||| ||||||||||||||  ||| || ||||||||||| |||| ||||| | || |||||||||||    
T  7762314 ttgttgaagctaatttcttgtaactcttttgtatctctttgtaagaactcattgatagtggattggagagat 7762385  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 40 - 111
Target Start/End: Original strand, 30236174 - 30236245
Alignment:
Q  40 ttgttgaagataatttcttgtaacattttggtttctctttgtaaaaacttattgacaatgaattggagagat 111  Q
    ||||||||| |||||||||||||| | || || ||||||||||| |||| ||||| | || |||||||||||    
T  30236174 ttgttgaagctaatttcttgtaacctatttgtatctctttgtaagaactcattgatagtggattggagagat 30236245  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 40 - 112
Target Start/End: Original strand, 51398863 - 51398935
Alignment:
Q  40 ttgttgaagataatttcttgtaacattttggtttctctttgtaaaaacttattgacaatgaattggagagatt 112  Q
    ||||||||| ||||||||||||||   || || ||||||||||| |||| ||||| | || ||||||||||||    
T  51398863 ttgttgaagctaatttcttgtaactcatttgtatctctttgtaagaactcattgatagtggattggagagatt 51398935  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 32; Significance: 0.000000006; HSPs: 3)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 40 - 111
Target Start/End: Original strand, 31659287 - 31659358
Alignment:
Q  40 ttgttgaagataatttcttgtaacattttggtttctctttgtaaaaacttattgacaatgaattggagagat 111  Q
    ||||||||| ||||||||||||||   || || ||||||||||| |||||||||| | || |||||||||||    
T  31659287 ttgttgaagctaatttcttgtaacccatttgtatctctttgtaagaacttattgatagtggattggagagat 31659358  T

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Target: chr1; HSP #2
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 43 - 84
Target Start/End: Complemental strand, 1050560 - 1050519
Alignment:
Q  43 ttgaagataatttcttgtaacattttggtttctctttgtaaa 84  Q
    |||||| ||||||||||||||||||| || ||||||||||||    
T  1050560 ttgaagctaatttcttgtaacatttttgtgtctctttgtaaa 1050519  T

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Target: chr1; HSP #3
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 51 - 83
Target Start/End: Original strand, 48260373 - 48260405
Alignment:
Q  51 aatttcttgtaacattttggtttctctttgtaa 83  Q
    ||||| |||||||||||||||||||||||||||    
T  48260373 aatttattgtaacattttggtttctctttgtaa 48260405  T

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Target: scaffold0219 (Bit Score: 29; Significance: 0.0000004; HSPs: 1)
Name: scaffold0219
Description:

Target: scaffold0219; HSP #1
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 40 - 111
Target Start/End: Complemental strand, 27562 - 27490
Alignment:
Q  40 ttgttgaagataatttcttgtaacattttggtttctctttgtaaa-aacttattgacaatgaattggagagat 111  Q
    ||||||||| ||||||||||||||   || || |||||||||||| |||||||||| | || |||||||||||    
T  27562 ttgttgaagctaatttcttgtaactcatttgtatctctttgtaaataacttattgatagtggattggagagat 27490  T

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Target: scaffold0053 (Bit Score: 29; Significance: 0.0000004; HSPs: 1)
Name: scaffold0053
Description:

Target: scaffold0053; HSP #1
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 40 - 84
Target Start/End: Original strand, 25102 - 25146
Alignment:
Q  40 ttgttgaagataatttcttgtaacattttggtttctctttgtaaa 84  Q
    ||||||||| |||||||||||||| |||| || ||||||||||||    
T  25102 ttgttgaaggtaatttcttgtaacctttttgtatctctttgtaaa 25146  T

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