View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF10187_low_49 (Length: 251)
Name: NF10187_low_49
Description: NF10187
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF10187_low_49 |
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Alignment Details
Target: chr2 (Bit Score: 175; Significance: 3e-94; HSPs: 1)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 175; E-Value: 3e-94
Query Start/End: Original strand, 47 - 241
Target Start/End: Original strand, 19982072 - 19982266
Alignment:
| Q |
47 |
aatttcaagaattatatctagaaaaccattattatttaatttcttcaataaattttttatttagtatttctttgtgctatatgaccgaaataattttgtc |
146 |
Q |
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| T |
19982072 |
aatttcaaaaattatatctagaaaaccattattatttaatttcttcaataaattttttatttagtatttctttgtgctatatggctgaaataattttgtc |
19982171 |
T |
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| Q |
147 |
ataaaaaacgtatgactgaaataattaggaggagaatagttttctaagaggaatatgtccttattctttggttattcttagggtgtggttctgtg |
241 |
Q |
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| T |
19982172 |
aaaaaaaacgtatgactgaaataattaggaggagaatagttttctaagaggaatatgtccttattctttggttattcttagggtgtggttttgtg |
19982266 |
T |
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