View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF10187_low_88 (Length: 219)

Name: NF10187_low_88
Description: NF10187
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF10187_low_88
NF10187_low_88
[»] chr7 (23 HSPs)
chr7 (20-195)||(10980617-10980794)
chr7 (55-168)||(47639491-47639605)
chr7 (57-150)||(24613189-24613280)
chr7 (57-173)||(28749918-28750035)
chr7 (57-175)||(10701643-10701763)
chr7 (20-57)||(48945183-48945220)
chr7 (66-162)||(7431203-7431299)
chr7 (80-139)||(29997381-29997440)
chr7 (20-58)||(24555922-24555960)
chr7 (20-58)||(31186666-31186704)
chr7 (20-57)||(10688457-10688494)
chr7 (20-57)||(13882602-13882639)
chr7 (68-175)||(44592319-44592425)
chr7 (20-75)||(38193215-38193270)
chr7 (20-57)||(2624404-2624441)
chr7 (20-57)||(6269527-6269564)
chr7 (20-57)||(19272470-19272507)
chr7 (20-57)||(23784583-23784620)
chr7 (24-57)||(48168849-48168882)
chr7 (21-57)||(1594146-1594182)
chr7 (20-56)||(13279438-13279474)
chr7 (20-56)||(23371449-23371485)
chr7 (20-56)||(39580187-39580223)
[»] chr6 (16 HSPs)
chr6 (64-173)||(9062850-9062960)
chr6 (57-174)||(27133919-27134037)
chr6 (83-162)||(2660340-2660420)
chr6 (64-173)||(8307915-8308023)
chr6 (57-175)||(23898752-23898871)
chr6 (66-142)||(31238332-31238408)
chr6 (66-142)||(31247702-31247778)
chr6 (20-58)||(16659512-16659550)
chr6 (97-142)||(17848235-17848280)
chr6 (20-57)||(29942464-29942501)
chr6 (21-57)||(3063505-3063541)
chr6 (20-56)||(3593593-3593629)
chr6 (20-56)||(5334643-5334679)
chr6 (20-56)||(10344050-10344086)
chr6 (20-64)||(10546200-10546244)
chr6 (20-56)||(13114398-13114434)
[»] chr1 (27 HSPs)
chr1 (57-172)||(14321020-14321136)
chr1 (57-196)||(27858670-27858809)
chr1 (57-175)||(35838317-35838435)
chr1 (64-174)||(24084153-24084264)
chr1 (64-167)||(44107701-44107805)
chr1 (57-173)||(34767275-34767392)
chr1 (64-142)||(1656789-1656868)
chr1 (57-152)||(26663110-26663205)
chr1 (57-150)||(5302381-5302475)
chr1 (57-113)||(15646130-15646186)
chr1 (84-142)||(15932677-15932735)
chr1 (20-69)||(50595987-50596035)
chr1 (20-56)||(5330420-5330456)
chr1 (20-56)||(5348163-5348199)
chr1 (20-67)||(18458823-18458870)
chr1 (20-58)||(24987606-24987644)
chr1 (89-142)||(25113837-25113891)
chr1 (20-57)||(16698868-16698905)
chr1 (21-58)||(26095812-26095849)
chr1 (21-58)||(32131925-32131962)
chr1 (24-65)||(43635826-43635867)
chr1 (20-57)||(47022090-47022127)
chr1 (20-56)||(10027998-10028034)
chr1 (21-57)||(25235773-25235809)
chr1 (21-57)||(26097049-26097085)
chr1 (21-57)||(33936099-33936135)
chr1 (20-59)||(36343151-36343191)
[»] chr8 (16 HSPs)
chr8 (57-175)||(11517562-11517681)
chr8 (85-142)||(31592703-31592760)
chr8 (20-57)||(29309795-29309832)
chr8 (68-175)||(26750438-26750546)
chr8 (20-64)||(34985343-34985387)
chr8 (95-162)||(7671729-7671796)
chr8 (57-116)||(21575445-21575504)
chr8 (64-123)||(45120972-45121031)
chr8 (57-142)||(3490219-3490304)
chr8 (20-57)||(4482044-4482081)
chr8 (20-57)||(14329621-14329658)
chr8 (20-57)||(25277727-25277764)
chr8 (20-57)||(29309564-29309601)
chr8 (20-56)||(960518-960554)
chr8 (23-59)||(12330330-12330366)
chr8 (20-56)||(27543646-27543682)
[»] chr4 (32 HSPs)
chr4 (65-175)||(52708489-52708600)
chr4 (57-175)||(16467843-16467961)
chr4 (57-174)||(32004414-32004532)
chr4 (64-173)||(779744-779855)
chr4 (65-175)||(35803499-35803610)
chr4 (57-175)||(46737248-46737367)
chr4 (57-175)||(55292278-55292397)
chr4 (57-175)||(27923974-27924096)
chr4 (61-175)||(53599336-53599450)
chr4 (57-142)||(38179836-38179921)
chr4 (64-174)||(47769663-47769770)
chr4 (20-59)||(50727587-50727626)
chr4 (20-59)||(50735601-50735640)
chr4 (23-57)||(6595268-6595302)
chr4 (20-57)||(22272929-22272966)
chr4 (20-56)||(46094261-46094297)
chr4 (67-131)||(49767573-49767637)
chr4 (20-59)||(35539801-35539840)
chr4 (82-152)||(53920211-53920282)
chr4 (25-59)||(9001441-9001475)
chr4 (20-58)||(11563538-11563576)
chr4 (20-58)||(37273416-37273454)
chr4 (20-57)||(20125439-20125476)
chr4 (20-57)||(21780121-21780158)
chr4 (20-57)||(24215762-24215799)
chr4 (94-162)||(43134465-43134531)
chr4 (20-56)||(550673-550709)
chr4 (20-56)||(3525889-3525925)
chr4 (20-64)||(18509975-18510019)
chr4 (23-59)||(39868465-39868501)
chr4 (20-76)||(44519437-44519493)
chr4 (20-56)||(50138488-50138524)
[»] chr5 (17 HSPs)
chr5 (57-173)||(39075000-39075114)
chr5 (57-175)||(3247678-3247797)
chr5 (57-142)||(40197647-40197732)
chr5 (95-174)||(4828872-4828952)
chr5 (61-152)||(26362447-26362538)
chr5 (61-152)||(22732140-22732232)
chr5 (20-56)||(36993004-36993040)
chr5 (20-59)||(22551519-22551558)
chr5 (20-59)||(37205001-37205040)
chr5 (20-58)||(10976768-10976806)
chr5 (21-59)||(15395541-15395579)
chr5 (20-54)||(16305130-16305164)
chr5 (20-57)||(26034844-26034881)
chr5 (20-57)||(29104443-29104480)
chr5 (21-57)||(9751698-9751734)
chr5 (20-76)||(33052797-33052853)
chr5 (21-57)||(38482317-38482353)
[»] chr3 (22 HSPs)
chr3 (64-173)||(45745515-45745625)
chr3 (68-172)||(48861207-48861312)
chr3 (57-175)||(51672510-51672630)
chr3 (61-175)||(11083220-11083333)
chr3 (57-135)||(24924577-24924655)
chr3 (60-163)||(34809148-34809252)
chr3 (61-162)||(26502775-26502877)
chr3 (83-151)||(31311490-31311559)
chr3 (20-71)||(7272546-7272597)
chr3 (20-59)||(49872970-49873009)
chr3 (57-142)||(52201301-52201383)
chr3 (20-58)||(6510213-6510251)
chr3 (21-59)||(12066226-12066264)
chr3 (20-57)||(14220707-14220744)
chr3 (20-57)||(14224934-14224971)
chr3 (20-57)||(19624031-19624068)
chr3 (20-57)||(20737509-20737546)
chr3 (20-57)||(30271543-30271580)
chr3 (20-57)||(51460784-51460821)
chr3 (20-59)||(5205375-5205415)
chr3 (20-56)||(47115583-47115619)
chr3 (20-56)||(49880758-49880794)
[»] chr2 (24 HSPs)
chr2 (64-175)||(37985156-37985267)
chr2 (57-173)||(37807239-37807356)
chr2 (64-141)||(5963957-5964034)
chr2 (61-142)||(32810002-32810083)
chr2 (74-142)||(33839592-33839658)
chr2 (20-56)||(28149687-28149723)
chr2 (57-173)||(31364878-31364999)
chr2 (20-56)||(33641132-33641168)
chr2 (20-59)||(33315446-33315485)
chr2 (95-142)||(33500104-33500151)
chr2 (20-59)||(34635703-34635742)
chr2 (20-59)||(45464632-45464671)
chr2 (20-58)||(19493469-19493507)
chr2 (20-58)||(20182262-20182300)
chr2 (20-54)||(21302284-21302318)
chr2 (20-58)||(22116153-22116191)
chr2 (20-57)||(17328091-17328128)
chr2 (69-142)||(18701845-18701918)
chr2 (23-59)||(16577371-16577407)
chr2 (20-56)||(19641446-19641482)
chr2 (20-56)||(19840039-19840075)
chr2 (20-59)||(25227820-25227860)
chr2 (20-56)||(29835102-29835138)
chr2 (20-56)||(37147551-37147587)
[»] scaffold0136 (1 HSPs)
scaffold0136 (20-59)||(657-696)
[»] scaffold0024 (1 HSPs)
scaffold0024 (69-134)||(36255-36320)
[»] scaffold0769 (1 HSPs)
scaffold0769 (20-59)||(4172-4211)
[»] scaffold0450 (1 HSPs)
scaffold0450 (20-59)||(8116-8155)
[»] scaffold0010 (2 HSPs)
scaffold0010 (20-59)||(26554-26593)
scaffold0010 (20-56)||(26308-26344)
[»] scaffold0809 (1 HSPs)
scaffold0809 (20-74)||(3751-3804)
[»] scaffold0032 (1 HSPs)
scaffold0032 (20-57)||(91049-91086)
[»] scaffold0384 (1 HSPs)
scaffold0384 (20-56)||(4448-4484)
[»] scaffold0142 (1 HSPs)
scaffold0142 (20-56)||(34847-34883)
[»] scaffold0031 (1 HSPs)
scaffold0031 (20-56)||(1827-1863)


Alignment Details
Target: chr7 (Bit Score: 131; Significance: 4e-68; HSPs: 23)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 131; E-Value: 4e-68
Query Start/End: Original strand, 20 - 195
Target Start/End: Original strand, 10980617 - 10980794
Alignment:
Q  20 atgacctatattacagagggtaaaaacctattaaccctaagaaaattaatatataaattatgcattgaaaattagtgaaaagtagaatgtttaactttat 119  Q
    |||||||||||||||||||||||| |||||||||||||||||| |||||||||||||||||| |||||||||||||||||||||||||||||||||||||    
T  10980617 atgacctatattacagagggtaaagacctattaaccctaagaagattaatatataaattatgtattgaaaattagtgaaaagtagaatgtttaactttat 10980716  T
Q  120 aaaagttaaaaagttgttgttttaatgaaa--aatatttatttttgacatccttaacctgcttttaagacactggtta 195  Q
    ||||||||||||||||||||||||||| ||    | |||||||||||||| |||||||||| ||||||||||||||||    
T  10980717 aaaagttaaaaagttgttgttttaatgtaatttttttttatttttgacattcttaacctgcctttaagacactggtta 10980794  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 55 - 168
Target Start/End: Original strand, 47639491 - 47639605
Alignment:
Q  55 cctaagaaaattaatatataaattatgcattgaaaattagtgaaaagtagaatgtttaactttataaaagttaaaaagttgttg-ttttaatgaaaaata 153  Q
    |||||||| ||||||||| ||||||| |||||||||||  |||||| |  ||||||||||||||||||||| |||||||||||| |||||||||||| |     
T  47639491 cctaagaatattaatatagaaattattcattgaaaattgatgaaaaatgaaatgtttaactttataaaagtcaaaaagttgttgtttttaatgaaaattt 47639590  T
Q  154 tttatttttgacatc 168  Q
    | |||||||||||||    
T  47639591 tctatttttgacatc 47639605  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 55; E-Value: 9e-23
Query Start/End: Original strand, 57 - 150
Target Start/End: Original strand, 24613189 - 24613280
Alignment:
Q  57 taagaaaattaatatataaattatgcattgaaaattagtgaaaagtagaatgtttaactttataaaagttaaaaagttgttgttttaatgaaaa 150  Q
    |||||||| ||||||| ||||| |||||||| |||||||||||||||||||||| |||||||| ||||| ||||||||||  ||||||||||||    
T  24613189 taagaaaactaatatagaaattttgcattgagaattagtgaaaagtagaatgttcaactttatgaaagtcaaaaagttgt--ttttaatgaaaa 24613280  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 57 - 173
Target Start/End: Original strand, 28749918 - 28750035
Alignment:
Q  57 taagaaaattaatatataaattatgcattgaaaattagtgaaaagtagaatgtttaactttataaaagttaaaaagttgttgttttaatgaaaaatatt- 155  Q
    |||||| ||||||||| ||||||||||||| |||||  ||||||||||||||||||||||||| ||||| |||||| || | |||| |  |||||| ||     
T  28749918 taagaagattaatatagaaattatgcattggaaattgatgaaaagtagaatgtttaactttatgaaagtaaaaaagatgatatttttaataaaaatgttc 28750017  T
Q  156 tatttttgacatccttaa 173  Q
    ||||||||||||||||||    
T  28750018 tatttttgacatccttaa 28750035  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 57 - 175
Target Start/End: Original strand, 10701643 - 10701763
Alignment:
Q  57 taagaaaattaatatataaattatgcattgaaaattagtgaaaagtagaatgtttaactttataaaagttaaaaagttgttg-ttttaat-gaaaaatat 154  Q
    |||||| ||||||||| |||||||  |||  ||||||||||||||| |||||||||| ||||||||||| ||||| | | || ||||||| ||||||| |    
T  10701643 taagaagattaatatagaaattatatattagaaattagtgaaaagttgaatgtttaagtttataaaagtcaaaaaatcgatgtttttaatggaaaaattt 10701742  T
Q  155 ttatttttgacatccttaacc 175  Q
     ||||||| ||||| ||||||    
T  10701743 ctatttttaacatcattaacc 10701763  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 20 - 57
Target Start/End: Complemental strand, 48945220 - 48945183
Alignment:
Q  20 atgacctatattacagagggtaaaaacctattaaccct 57  Q
    ||||||||||||||||||||||||||||||||||||||    
T  48945220 atgacctatattacagagggtaaaaacctattaaccct 48945183  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 66 - 162
Target Start/End: Complemental strand, 7431299 - 7431203
Alignment:
Q  66 taatatataaattatgcattgaaaattagtgaaaagtagaatgtttaactttataaaagttaaaaagttgttgttttaatgaaaaatatttattttt 162  Q
    ||||||| ||||| | ||||||||| |  | ||||||| ||| ||| ||||||||||||| ||||| ||||| ||||||||||| || |||||||||    
T  7431299 taatataaaaattttacattgaaaaatgataaaaagtaaaatatttcactttataaaagtgaaaaaattgttattttaatgaaagatttttattttt 7431203  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 80 - 139
Target Start/End: Original strand, 29997381 - 29997440
Alignment:
Q  80 tgcattgaaaattagtgaaaagtagaatgtttaactttataaaagttaaaaagttgttgt 139  Q
    ||||||||||| || |||||||| |||||||  |||||| ||||||||||||||||||||    
T  29997381 tgcattgaaaaataatgaaaagtggaatgttccactttaaaaaagttaaaaagttgttgt 29997440  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 20 - 58
Target Start/End: Original strand, 24555922 - 24555960
Alignment:
Q  20 atgacctatattacagagggtaaaaacctattaacccta 58  Q
    |||||||||||||||| ||||||||||||||||||||||    
T  24555922 atgacctatattacagggggtaaaaacctattaacccta 24555960  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 20 - 58
Target Start/End: Complemental strand, 31186704 - 31186666
Alignment:
Q  20 atgacctatattacagagggtaaaaacctattaacccta 58  Q
    |||||||||||||||||||||||| ||||||||||||||    
T  31186704 atgacctatattacagagggtaaagacctattaacccta 31186666  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 20 - 57
Target Start/End: Complemental strand, 10688494 - 10688457
Alignment:
Q  20 atgacctatattacagagggtaaaaacctattaaccct 57  Q
    |||||||||||||||||||||||| |||||||||||||    
T  10688494 atgacctatattacagagggtaaagacctattaaccct 10688457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 20 - 57
Target Start/End: Complemental strand, 13882639 - 13882602
Alignment:
Q  20 atgacctatattacagagggtaaaaacctattaaccct 57  Q
    |||||||||||||||||||||||| |||||||||||||    
T  13882639 atgacctatattacagagggtaaagacctattaaccct 13882602  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 68 - 175
Target Start/End: Original strand, 44592319 - 44592425
Alignment:
Q  68 atatataaattatgcattgaaaattagtgaaaagtagaatgtttaactttataaaagttaaaaagttgttg-ttttaatgaaaaatatttatttttgaca 166  Q
    |||||||||||||||||| |||||| |||||||||  | |||||||  |||||||| |  |||| |||||| ||||||| ||||| | |||||||| |||    
T  44592319 atatataaattatgcattaaaaattggtgaaaagtgaagtgtttaaacttataaaaat--aaaaattgttgtttttaataaaaaaaaattatttttaaca 44592416  T
Q  167 tccttaacc 175  Q
    | |||||||    
T  44592417 ttcttaacc 44592425  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 20 - 75
Target Start/End: Original strand, 38193215 - 38193270
Alignment:
Q  20 atgacctatattacagagggtaaaaacctattaaccctaagaaaattaatatataa 75  Q
    |||||||||||||||| ||||||| |||||||||||| || ||||| | |||||||    
T  38193215 atgacctatattacagggggtaaagacctattaacccaaaaaaaataagtatataa 38193270  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 20 - 57
Target Start/End: Complemental strand, 2624441 - 2624404
Alignment:
Q  20 atgacctatattacagagggtaaaaacctattaaccct 57  Q
    |||||||||||||||||||||||||  |||||||||||    
T  2624441 atgacctatattacagagggtaaaagactattaaccct 2624404  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 20 - 57
Target Start/End: Complemental strand, 6269564 - 6269527
Alignment:
Q  20 atgacctatattacagagggtaaaaacctattaaccct 57  Q
    |||||||||||||||| ||||||| |||||||||||||    
T  6269564 atgacctatattacagggggtaaagacctattaaccct 6269527  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 20 - 57
Target Start/End: Original strand, 19272470 - 19272507
Alignment:
Q  20 atgacctatattacagagggtaaaaacctattaaccct 57  Q
    |||||||||||||||| ||||||| |||||||||||||    
T  19272470 atgacctatattacagggggtaaagacctattaaccct 19272507  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 20 - 57
Target Start/End: Complemental strand, 23784620 - 23784583
Alignment:
Q  20 atgacctatattacagagggtaaaaacctattaaccct 57  Q
    |||||||||||||||| ||||||| |||||||||||||    
T  23784620 atgacctatattacagggggtaaagacctattaaccct 23784583  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 24 - 57
Target Start/End: Complemental strand, 48168882 - 48168849
Alignment:
Q  24 cctatattacagagggtaaaaacctattaaccct 57  Q
    |||||||||||||||||||| |||||||||||||    
T  48168882 cctatattacagagggtaaagacctattaaccct 48168849  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 21 - 57
Target Start/End: Original strand, 1594146 - 1594182
Alignment:
Q  21 tgacctatattacagagggtaaaaacctattaaccct 57  Q
    ||||||||||||||| ||||||| |||||||||||||    
T  1594146 tgacctatattacagggggtaaagacctattaaccct 1594182  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 20 - 56
Target Start/End: Original strand, 13279438 - 13279474
Alignment:
Q  20 atgacctatattacagagggtaaaaacctattaaccc 56  Q
    |||||||||||||||| ||||||| ||||||||||||    
T  13279438 atgacctatattacagggggtaaagacctattaaccc 13279474  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 20 - 56
Target Start/End: Complemental strand, 23371485 - 23371449
Alignment:
Q  20 atgacctatattacagagggtaaaaacctattaaccc 56  Q
    |||||||||||||||| ||||||| ||||||||||||    
T  23371485 atgacctatattacagggggtaaagacctattaaccc 23371449  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 20 - 56
Target Start/End: Original strand, 39580187 - 39580223
Alignment:
Q  20 atgacctatattacagagggtaaaaacctattaaccc 56  Q
    |||||||||||||||| ||||||| ||||||||||||    
T  39580187 atgacctatattacagggggtaaagacctattaaccc 39580223  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 67; Significance: 6e-30; HSPs: 16)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 67; E-Value: 6e-30
Query Start/End: Original strand, 64 - 173
Target Start/End: Complemental strand, 9062960 - 9062850
Alignment:
Q  64 attaatatataaattatgcattgaaaattagtgaaaagtagaatgtttaactttataaaagttaaaaagttgttg-ttttaatgaaaaatatttattttt 162  Q
    ||||||||| ||||||||||||| ||||| ||||||||| |||||||||||||||| |||| ||||||||||||| |||||||||||| | | |||||||    
T  9062960 attaatatagaaattatgcattggaaattggtgaaaagttgaatgtttaactttatgaaagataaaaagttgttgtttttaatgaaaattttctattttt 9062861  T
Q  163 gacatccttaa 173  Q
    |||||||||||    
T  9062860 gacatccttaa 9062850  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 57 - 174
Target Start/End: Original strand, 27133919 - 27134037
Alignment:
Q  57 taagaaaattaatatataaattatgcattgaaaattagtgaaaagtagaatgtttaactttataaaagttaaaaagttgttg-ttttaatgaaaaatatt 155  Q
    |||||| |||||||||  |||| ||||||||||||| ||||||||| |||||||||||| ||| ||||| ||||| |||||| |||||||||||  | ||    
T  27133919 taagaagattaatatagtaattttgcattgaaaattggtgaaaagtggaatgtttaactatatgaaagtaaaaaaattgttgtttttaatgaaatttttt 27134018  T
Q  156 tatttttgacatccttaac 174  Q
    |||||||||||||||||||    
T  27134019 tatttttgacatccttaac 27134037  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 45; E-Value: 8e-17
Query Start/End: Original strand, 83 - 162
Target Start/End: Original strand, 2660340 - 2660420
Alignment:
Q  83 attgaaaattagtgaaaagtagaatgtttaactttataaaagttaaaaagttgttg-ttttaatgaaaaatatttattttt 162  Q
    ||||||||||  |||||||||||| |||| |||||||||||||||||||||||||| |||||||  ||||||| |||||||    
T  2660340 attgaaaattgatgaaaagtagaacgtttcactttataaaagttaaaaagttgttgtttttaatagaaaatatctattttt 2660420  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 64 - 173
Target Start/End: Original strand, 8307915 - 8308023
Alignment:
Q  64 attaatatataaattatgcattgaaaattagtgaaaagtagaatgtttaactttataaaagttaaaaagttgttgtttt-aatgaaaaatatttattttt 162  Q
    ||||||||| ||||||||||||| |||||  |||||||| |||||||| | |||||||||||   |||||||||||||| |||||||| | | |||||||    
T  8307915 attaatatagaaattatgcattggaaattgatgaaaagtggaatgtttgattttataaaagt--caaagttgttgttttaaatgaaaattttctattttt 8308012  T
Q  163 gacatccttaa 173  Q
     ||||||||||    
T  8308013 aacatccttaa 8308023  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 57 - 175
Target Start/End: Complemental strand, 23898871 - 23898752
Alignment:
Q  57 taagaaaattaatatataaattatgcattgaaaattagtgaaaagtagaatgtttaactttataaaagt-taaaaagttgttgttttaatgaaaaatatt 155  Q
    |||||| ||||| ||| |||||||| |||| |||||  || ||||| |||||||||||||||| |||||  |||||||| |  |||||||||||| | |     
T  23898871 taagaagattaacatagaaattatgtattggaaattgatggaaagtggaatgtttaactttatgaaagtaaaaaaagttttgtttttaatgaaaattttc 23898772  T
Q  156 tatttttgacatccttaacc 175  Q
    ||||||||||||||||||||    
T  23898771 tatttttgacatccttaacc 23898752  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 66 - 142
Target Start/End: Original strand, 31238332 - 31238408
Alignment:
Q  66 taatatataaattatgcattgaaaattagtgaaaagtagaatgtttaactttataaaagttaaaaagttgttgtttt 142  Q
    ||||||| ||||| ||||||| ||| |  ||||||||  ||||||  ||||||||||||| ||||||||||||||||    
T  31238332 taatatagaaattttgcattggaaaatgatgaaaagtgaaatgttccactttataaaagtcaaaaagttgttgtttt 31238408  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 66 - 142
Target Start/End: Original strand, 31247702 - 31247778
Alignment:
Q  66 taatatataaattatgcattgaaaattagtgaaaagtagaatgtttaactttataaaagttaaaaagttgttgtttt 142  Q
    ||||||| ||||| ||||||| ||| |  ||||||||  ||||||  ||||||||||||| ||||||||||||||||    
T  31247702 taatatagaaattttgcattggaaaatgatgaaaagtgaaatgttccactttataaaagtcaaaaagttgttgtttt 31247778  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 20 - 58
Target Start/End: Complemental strand, 16659550 - 16659512
Alignment:
Q  20 atgacctatattacagagggtaaaaacctattaacccta 58  Q
    |||||||||||||||||||||||||  ||||||||||||    
T  16659550 atgacctatattacagagggtaaaatactattaacccta 16659512  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 97 - 142
Target Start/End: Complemental strand, 17848280 - 17848235
Alignment:
Q  97 aaaagtagaatgtttaactttataaaagttaaaaagttgttgtttt 142  Q
    |||||| |||||||||||||||||||| | ||| ||||||||||||    
T  17848280 aaaagtggaatgtttaactttataaaaatcaaatagttgttgtttt 17848235  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 20 - 57
Target Start/End: Original strand, 29942464 - 29942501
Alignment:
Q  20 atgacctatattacagagggtaaaaacctattaaccct 57  Q
    |||||||||||||||| ||||||| |||||||||||||    
T  29942464 atgacctatattacagggggtaaagacctattaaccct 29942501  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 21 - 57
Target Start/End: Original strand, 3063505 - 3063541
Alignment:
Q  21 tgacctatattacagagggtaaaaacctattaaccct 57  Q
    ||||||||||||||| ||||||| |||||||||||||    
T  3063505 tgacctatattacagggggtaaagacctattaaccct 3063541  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 20 - 56
Target Start/End: Original strand, 3593593 - 3593629
Alignment:
Q  20 atgacctatattacagagggtaaaaacctattaaccc 56  Q
    ||||| |||||||||||||||||| ||||||||||||    
T  3593593 atgacatatattacagagggtaaagacctattaaccc 3593629  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 20 - 56
Target Start/End: Complemental strand, 5334679 - 5334643
Alignment:
Q  20 atgacctatattacagagggtaaaaacctattaaccc 56  Q
    ||||| |||||||||| ||||||||||||||||||||    
T  5334679 atgacttatattacagggggtaaaaacctattaaccc 5334643  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 20 - 56
Target Start/End: Complemental strand, 10344086 - 10344050
Alignment:
Q  20 atgacctatattacagagggtaaaaacctattaaccc 56  Q
    |||||||||||||||| ||||||| ||||||||||||    
T  10344086 atgacctatattacagggggtaaagacctattaaccc 10344050  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 20 - 64
Target Start/End: Original strand, 10546200 - 10546244
Alignment:
Q  20 atgacctatattacagagggtaaaaacctattaaccctaagaaaa 64  Q
    |||||||||||||||||||||||||  |||||||| | |||||||    
T  10546200 atgacctatattacagagggtaaaacactattaacacaaagaaaa 10546244  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 20 - 56
Target Start/End: Complemental strand, 13114434 - 13114398
Alignment:
Q  20 atgacctatattacagagggtaaaaacctattaaccc 56  Q
    |||||||||||||||| ||||||| ||||||||||||    
T  13114434 atgacctatattacagggggtaaagacctattaaccc 13114398  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 65; Significance: 1e-28; HSPs: 27)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 57 - 172
Target Start/End: Complemental strand, 14321136 - 14321020
Alignment:
Q  57 taagaaaattaatatataaattatgcattgaaaattagtgaaaagtagaatgtttaactttataaaagttaaaaagttgttg-ttttaatgaaaaatatt 155  Q
    |||||| ||||||||| |||||||||||||||||||  ||||||||| ||||||||| ||||| ||||| |||||||||||| |||||||||||| | |     
T  14321136 taagaagattaatatagaaattatgcattgaaaattgatgaaaagtaaaatgtttaattttatgaaagtaaaaaagttgttgtttttaatgaaaattttc 14321037  T
Q  156 tatttttgacatcctta 172  Q
    |||||||||||||||||    
T  14321036 tatttttgacatcctta 14321020  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 57 - 196
Target Start/End: Complemental strand, 27858809 - 27858670
Alignment:
Q  57 taagaaaattaatatataaattatgcattgaaaattagtgaaaagtagaatgtttaactttataaaagttaaaaagttgttgttttaatgaaaaatattt 156  Q
    |||||| ||||||||| ||||||||| ||||||||| ||||||||| |||||||||| ||||| ||||| ||||| |||||  |||||| |||||| | |    
T  27858809 taagaagattaatataaaaattatgcgttgaaaattggtgaaaagttgaatgtttaagtttatgaaagtcaaaaaattgtt--tttaataaaaaatttct 27858712  T
Q  157 atttttgacatccttaacc--tgcttttaagacactggttag 196  Q
    ||||| | |||||||||||  ||| |||||| ||||||||||    
T  27858711 attttagtcatccttaaccattgcctttaaggcactggttag 27858670  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 57 - 175
Target Start/End: Complemental strand, 35838435 - 35838317
Alignment:
Q  57 taagaaaattaatatataaattatgcattgaaaattagtgaaaagtagaatgtttaactttataaaagttaaaaagttgtt-gttttaatgaaaaatatt 155  Q
    |||||| || |||||| ||||||||||||||||||| ||||||||||||||| |||||||||| ||||| ||||| |||||  ||||||| |||| | |     
T  35838435 taagaagataaatataaaaattatgcattgaaaattggtgaaaagtagaatg-ttaactttatgaaagtcaaaaaattgttatttttaataaaaatttta 35838337  T
Q  156 tatttttgacatccttaacc 175  Q
    ||||||||||||||||||||    
T  35838336 tatttttgacatccttaacc 35838317  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 52; E-Value: 5e-21
Query Start/End: Original strand, 64 - 174
Target Start/End: Original strand, 24084153 - 24084264
Alignment:
Q  64 attaatatataaattatgcattgaaaattagtgaaaagtagaatgtttaactttataaaagttaaaaagttgttg-ttttaatgaaaaatatttattttt 162  Q
    ||||||||| |||||||| ||||||||||  | |||||| |||||||||||||||| ||||| ||||| |||||| |||| ||||||| | | |||||||    
T  24084153 attaatataaaaattatgtattgaaaattgataaaaagtggaatgtttaactttatgaaagtcaaaaaattgttgtttttgatgaaaattttctattttt 24084252  T
Q  163 gacatccttaac 174  Q
    ||||||||||||    
T  24084253 gacatccttaac 24084264  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 49; E-Value: 3e-19
Query Start/End: Original strand, 64 - 167
Target Start/End: Original strand, 44107701 - 44107805
Alignment:
Q  64 attaatatataaattatgcattgaaaattagtgaaaagtagaatgtttaactttataaaagttaaaaagttgttg-ttttaatgaaaaatatttattttt 162  Q
    ||||||||  |||||||| |||| ||||| ||||||||||||||||||| |||||| ||||| |||||||||||| ||||||||||   | |||||||||    
T  44107701 attaatattgaaattatgtattggaaattggtgaaaagtagaatgtttacctttatgaaagtcaaaaagttgttgtttttaatgaattttttttattttt 44107800  T
Q  163 gacat 167  Q
    |||||    
T  44107801 gacat 44107805  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 57 - 173
Target Start/End: Original strand, 34767275 - 34767392
Alignment:
Q  57 taagaaaattaatatataaattatgcattgaaaattagtgaaaagtagaatgtttaactttataaaagttaaaaagttgttgtttt-aatgaaaaatatt 155  Q
    |||||| ||||||||| ||||||||| ||||||||| ||||||| || ||||| ||||| ||||||||| ||||| || || |||| |||||||| | |     
T  34767275 taagaagattaatataaaaattatgccttgaaaattggtgaaaaataaaatgtgtaactatataaaagtcaaaaaattattatttttaatgaaaatttta 34767374  T
Q  156 tatttttgacatccttaa 173  Q
    ||| ||||||||||||||    
T  34767375 tatgtttgacatccttaa 34767392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 64 - 142
Target Start/End: Complemental strand, 1656868 - 1656789
Alignment:
Q  64 attaatatataaattatgcattgaaaattagtgaaaa-gtagaatgtttaactttataaaagttaaaaagttgttgtttt 142  Q
    ||||||||||||||||||||||  ||||| ||||||| || |||||||||| ||||||||||| |||||| |||||||||    
T  1656868 attaatatataaattatgcattataaattggtgaaaaagtggaatgtttaaatttataaaagtaaaaaaggtgttgtttt 1656789  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 57 - 152
Target Start/End: Original strand, 26663110 - 26663205
Alignment:
Q  57 taagaaaattaatatataaattatgcattgaaaattagtgaaaagtagaatgtttaactttataaaagttaaaaagttgttgttttaatgaaaaat 152  Q
    |||||| ||||||||| || || |||||| ||||||  |||||||| ||||||| |||| ||| ||| | |||| |||||||||||||||||||||    
T  26663110 taagaagattaatatagaatttttgcattaaaaattgatgaaaagttgaatgttcaactctatgaaaatcaaaaggttgttgttttaatgaaaaat 26663205  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 57 - 150
Target Start/End: Complemental strand, 5302475 - 5302381
Alignment:
Q  57 taagaaaattaatatataaattatgcattgaaaattagtgaaaagtagaatgtttaactttataaaagttaaaaagttgttg-ttttaatgaaaa 150  Q
    |||||| ||||||| ||| ||||||||||| ||||  ||||||| |  ||| ||||||||||| ||||||||||| |||||| ||||||||||||    
T  5302475 taagaagattaatacatagattatgcattggaaatcggtgaaaaatgaaatatttaactttatgaaagttaaaaaattgttgtttttaatgaaaa 5302381  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 57 - 113
Target Start/End: Original strand, 15646130 - 15646186
Alignment:
Q  57 taagaaaattaatatataaattatgcattgaaaattagtgaaaagtagaatgtttaa 113  Q
    |||||| ||||||||| |||||||||||||||||||  |||||||| ||||||||||    
T  15646130 taagaagattaatatagaaattatgcattgaaaattgatgaaaagtggaatgtttaa 15646186  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 84 - 142
Target Start/End: Complemental strand, 15932735 - 15932677
Alignment:
Q  84 ttgaaaattagtgaaaagtagaatgtttaactttataaaagttaaaaagttgttgtttt 142  Q
    ||||||| | ||||||||| |||||||||||||||||||||  ||||| ||||||||||    
T  15932735 ttgaaaaatggtgaaaagtggaatgtttaactttataaaagaaaaaaaattgttgtttt 15932677  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 20 - 69
Target Start/End: Complemental strand, 50596035 - 50595987
Alignment:
Q  20 atgacctatattacagagggtaaaaacctattaaccctaagaaaattaat 69  Q
    ||||||||||||||| |||||||| ||||||||||||||| |||||||||    
T  50596035 atgacctatattaca-agggtaaagacctattaaccctaaaaaaattaat 50595987  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 20 - 56
Target Start/End: Complemental strand, 5330456 - 5330420
Alignment:
Q  20 atgacctatattacagagggtaaaaacctattaaccc 56  Q
    ||||||||||||||| |||||||||||||||||||||    
T  5330456 atgacctatattacatagggtaaaaacctattaaccc 5330420  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 20 - 56
Target Start/End: Complemental strand, 5348199 - 5348163
Alignment:
Q  20 atgacctatattacagagggtaaaaacctattaaccc 56  Q
    |||||||||||||||||||||||| ||||||||||||    
T  5348199 atgacctatattacagagggtaaagacctattaaccc 5348163  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 20 - 67
Target Start/End: Original strand, 18458823 - 18458870
Alignment:
Q  20 atgacctatattacagagggtaaaaacctattaaccctaagaaaatta 67  Q
    |||||||||||||||| ||||||| ||||||||||||| | |||||||    
T  18458823 atgacctatattacagggggtaaagacctattaacccttaaaaaatta 18458870  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 20 - 58
Target Start/End: Complemental strand, 24987644 - 24987606
Alignment:
Q  20 atgacctatattacagagggtaaaaacctattaacccta 58  Q
    |||||||||||||||| ||||||| ||||||||||||||    
T  24987644 atgacctatattacagggggtaaagacctattaacccta 24987606  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 89 - 142
Target Start/End: Original strand, 25113837 - 25113891
Alignment:
Q  89 aattagtgaaaagtagaatgtttaactttataaaagt-taaaaagttgttgtttt 142  Q
    |||| ||||||| |||||||||||||||||| |||||  ||||||||||||||||    
T  25113837 aattggtgaaaaatagaatgtttaactttatgaaagtcaaaaaagttgttgtttt 25113891  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 20 - 57
Target Start/End: Complemental strand, 16698905 - 16698868
Alignment:
Q  20 atgacctatattacagagggtaaaaacctattaaccct 57  Q
    |||| ||||||||||||||||||| |||||||||||||    
T  16698905 atgatctatattacagagggtaaagacctattaaccct 16698868  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 21 - 58
Target Start/End: Complemental strand, 26095849 - 26095812
Alignment:
Q  21 tgacctatattacagagggtaaaaacctattaacccta 58  Q
    ||||||||||||||| ||||||| ||||||||||||||    
T  26095849 tgacctatattacagggggtaaagacctattaacccta 26095812  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 21 - 58
Target Start/End: Original strand, 32131925 - 32131962
Alignment:
Q  21 tgacctatattacagagggtaaaaacctattaacccta 58  Q
    ||||||||||||||| ||||||| ||||||||||||||    
T  32131925 tgacctatattacagggggtaaagacctattaacccta 32131962  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 24 - 65
Target Start/End: Complemental strand, 43635867 - 43635826
Alignment:
Q  24 cctatattacagagggtaaaaacctattaaccctaagaaaat 65  Q
    |||||||||||| ||||||| ||||||||||||||| |||||    
T  43635867 cctatattacagggggtaaagacctattaaccctaaaaaaat 43635826  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 20 - 57
Target Start/End: Original strand, 47022090 - 47022127
Alignment:
Q  20 atgacctatattacagagggtaaaaacctattaaccct 57  Q
    |||||||||||||||| ||||||| |||||||||||||    
T  47022090 atgacctatattacagggggtaaagacctattaaccct 47022127  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 20 - 56
Target Start/End: Original strand, 10027998 - 10028034
Alignment:
Q  20 atgacctatattacagagggtaaaaacctattaaccc 56  Q
    |||||||||||||||| ||||||| ||||||||||||    
T  10027998 atgacctatattacagggggtaaagacctattaaccc 10028034  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 21 - 57
Target Start/End: Complemental strand, 25235809 - 25235773
Alignment:
Q  21 tgacctatattacagagggtaaaaacctattaaccct 57  Q
    ||||||||||||||| ||||||| |||||||||||||    
T  25235809 tgacctatattacagggggtaaagacctattaaccct 25235773  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 21 - 57
Target Start/End: Original strand, 26097049 - 26097085
Alignment:
Q  21 tgacctatattacagagggtaaaaacctattaaccct 57  Q
    ||||||||||||||| ||||||| |||||||||||||    
T  26097049 tgacctatattacagggggtaaagacctattaaccct 26097085  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 21 - 57
Target Start/End: Original strand, 33936099 - 33936135
Alignment:
Q  21 tgacctatattacagagggtaaaaacctattaaccct 57  Q
    ||||||||||||||| |||||||| ||||||||||||    
T  33936099 tgacctatattacagggggtaaaatcctattaaccct 33936135  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 20 - 59
Target Start/End: Complemental strand, 36343191 - 36343151
Alignment:
Q  20 atgacctatattacag-agggtaaaaacctattaaccctaa 59  Q
    |||||||||||||||| |||||||| |||||||||||||||    
T  36343191 atgacctatattacaggagggtaaagacctattaaccctaa 36343151  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 64; Significance: 4e-28; HSPs: 16)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 57 - 175
Target Start/End: Complemental strand, 11517681 - 11517562
Alignment:
Q  57 taagaaaattaatatataaattatgcattgaaaattagtgaaaagtagaatgtttaactttataaaagttaaaaagttgttgttttaatgaaaaatatt- 155  Q
    |||||||||||||||| ||||||||||||| ||||| || ||||||||||||||||||||||| ||||| |||||||||||||||| |  |||  | ||     
T  11517681 taagaaaattaatataaaaattatgcattggaaattggtaaaaagtagaatgtttaactttatgaaagtcaaaaagttgttgtttttaataaattttttc 11517582  T
Q  156 tatttttgacatccttaacc 175  Q
    ||||||||||||||||||||    
T  11517581 tatttttgacatccttaacc 11517562  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 85 - 142
Target Start/End: Original strand, 31592703 - 31592760
Alignment:
Q  85 tgaaaattagtgaaaagtagaatgtttaactttataaaagttaaaaagttgttgtttt 142  Q
    |||||||| ||||||| | |||||||||| ||||||||||||||||||||||| ||||    
T  31592703 tgaaaattggtgaaaaattgaatgtttaattttataaaagttaaaaagttgttatttt 31592760  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 20 - 57
Target Start/End: Original strand, 29309795 - 29309832
Alignment:
Q  20 atgacctatattacagagggtaaaaacctattaaccct 57  Q
    |||||||||||||||| |||||||||||||||||||||    
T  29309795 atgacctatattacagggggtaaaaacctattaaccct 29309832  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 68 - 175
Target Start/End: Complemental strand, 26750546 - 26750438
Alignment:
Q  68 atatataaattatgcattgaaaattagtgaaaagtagaatgtttaactttataaaagttaaaaagttgttgtttt-aatgaaaaatatttatttttgaca 166  Q
    ||||| |||||||| |||| |||||  |||||| |   |||||||||||||| ||||| |||| |||   ||||| ||| ||||| ||||||||||||||    
T  26750546 atatagaaattatgtattggaaattgatgaaaaatgagatgtttaactttatgaaagtcaaaaggtttaagtttttaataaaaaaaatttatttttgaca 26750447  T
Q  167 tccttaacc 175  Q
    |||||||||    
T  26750446 tccttaacc 26750438  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 20 - 64
Target Start/End: Original strand, 34985343 - 34985387
Alignment:
Q  20 atgacctatattacagagggtaaaaacctattaaccctaagaaaa 64  Q
    |||||||||||||||| ||||||| ||||||||||||||| ||||    
T  34985343 atgacctatattacagggggtaaagacctattaaccctaaaaaaa 34985387  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 95 - 162
Target Start/End: Original strand, 7671729 - 7671796
Alignment:
Q  95 tgaaaagtagaatgtttaactttataaaagttaaaaagttgttgttttaatgaaaaatatttattttt 162  Q
    ||||||||| ||||||  | |||| |||||| |||||||||||||||| |  ||||||||||||||||    
T  7671729 tgaaaagtaaaatgttccattttaaaaaagtcaaaaagttgttgtttttaataaaaatatttattttt 7671796  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 57 - 116
Target Start/End: Original strand, 21575445 - 21575504
Alignment:
Q  57 taagaaaattaatatataaattatgcattgaaaattagtgaaaagtagaatgtttaactt 116  Q
    |||||| ||||||||| ||||||| ||||| ||||| || |||| |||||||||||||||    
T  21575445 taagaagattaatatagaaattatacattggaaattggttaaaaatagaatgtttaactt 21575504  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 64 - 123
Target Start/End: Original strand, 45120972 - 45121031
Alignment:
Q  64 attaatatataaattatgcattgaaaattagtgaaaagtagaatgtttaactttataaaa 123  Q
    ||||||||| ||||||||||| | || || ||||||||| |||| |||||||||||||||    
T  45120972 attaatatagaaattatgcatcggaagttggtgaaaagtggaatatttaactttataaaa 45121031  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 57 - 142
Target Start/End: Complemental strand, 3490304 - 3490219
Alignment:
Q  57 taagaaaattaatatataaattatgcattgaaaattagtgaaaagtagaatgtttaactttataaaagttaaaaagttgttgtttt 142  Q
    |||||||||| || ||  |||| |||||||||||||  | |||||| | |||||||||||| ||||||| ||||  ||||||||||    
T  3490304 taagaaaatttatttaggaattttgcattgaaaattgttaaaaagtggtatgtttaactttttaaaagtcaaaagtttgttgtttt 3490219  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 20 - 57
Target Start/End: Complemental strand, 4482081 - 4482044
Alignment:
Q  20 atgacctatattacagagggtaaaaacctattaaccct 57  Q
    ||||| |||||||||| |||||||||||||||||||||    
T  4482081 atgacatatattacagggggtaaaaacctattaaccct 4482044  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 20 - 57
Target Start/End: Original strand, 14329621 - 14329658
Alignment:
Q  20 atgacctatattacagagggtaaaaacctattaaccct 57  Q
    |||||||||||||||| ||||||| |||||||||||||    
T  14329621 atgacctatattacagggggtaaagacctattaaccct 14329658  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 20 - 57
Target Start/End: Original strand, 25277727 - 25277764
Alignment:
Q  20 atgacctatattacagagggtaaaaacctattaaccct 57  Q
    |||||||||||||||| ||||||| |||||||||||||    
T  25277727 atgacctatattacagggggtaaagacctattaaccct 25277764  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 20 - 57
Target Start/End: Complemental strand, 29309601 - 29309564
Alignment:
Q  20 atgacctatattacagagggtaaaaacctattaaccct 57  Q
    |||||||||||||||| ||||||| |||||||||||||    
T  29309601 atgacctatattacagggggtaaagacctattaaccct 29309564  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 20 - 56
Target Start/End: Original strand, 960518 - 960554
Alignment:
Q  20 atgacctatattacagagggtaaaaacctattaaccc 56  Q
    |||||||||||||||| ||||||| ||||||||||||    
T  960518 atgacctatattacagggggtaaagacctattaaccc 960554  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 23 - 59
Target Start/End: Complemental strand, 12330366 - 12330330
Alignment:
Q  23 acctatattacagagggtaaaaacctattaaccctaa 59  Q
    ||||||||||||| ||||||| |||||||||||||||    
T  12330366 acctatattacagggggtaaagacctattaaccctaa 12330330  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 20 - 56
Target Start/End: Original strand, 27543646 - 27543682
Alignment:
Q  20 atgacctatattacagagggtaaaaacctattaaccc 56  Q
    |||||||||||||||| ||||||| ||||||||||||    
T  27543646 atgacctatattacagggggtaaagacctattaaccc 27543682  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 60; Significance: 9e-26; HSPs: 32)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 60; E-Value: 9e-26
Query Start/End: Original strand, 65 - 175
Target Start/End: Complemental strand, 52708600 - 52708489
Alignment:
Q  65 ttaatatataaattatgcattgaaaattagtgaaaagtagaatgtttaactttataaaagttaaaaagttgttg-ttttaatgaaaaatatttatttttg 163  Q
    |||||||| ||||| | ||||||||||||||||||||| |||||||||||||||| ||||| |||||||||||| ||||||| |||||| | | |||||     
T  52708600 ttaatatagaaattgtacattgaaaattagtgaaaagttgaatgtttaactttatgaaagtcaaaaagttgttgtttttaataaaaaatttctcttttta 52708501  T
Q  164 acatccttaacc 175  Q
    ||||||||||||    
T  52708500 acatccttaacc 52708489  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 57 - 175
Target Start/End: Complemental strand, 16467961 - 16467843
Alignment:
Q  57 taagaaaattaatatataaattatgcattgaaaattagtgaaaagtagaatgtttaactttataaaagttaaaaagttgttg-ttttaatgaaaaatatt 155  Q
    |||||| ||||||||| ||||||||||||| |||||  ||||| || |||||||||||||||| ||||| |||||||| ||| |||||||||||  | ||    
T  16467961 taagaagattaatatagaaattatgcattggaaattgatgaaa-gttgaatgtttaactttatgaaagtaaaaaagttattgtttttaatgaaatttttt 16467863  T
Q  156 tatttttgacatccttaacc 175  Q
    ||||||||||||||||||||    
T  16467862 tatttttgacatccttaacc 16467843  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 55; E-Value: 9e-23
Query Start/End: Original strand, 57 - 174
Target Start/End: Original strand, 32004414 - 32004532
Alignment:
Q  57 taagaaaattaatatataaattatgcattgaaaattagtgaaaagtagaatgtttaactttataaaagttaaaaagttgttg-ttttaatgaaaaatatt 155  Q
    |||||| ||||||||| |||||||||||| |||||| | ||||||| |||||||||||||||| ||||| |||||||||||| |||||||||||  | |     
T  32004414 taagaagattaatatagaaattatgcatttaaaattggggaaaagtggaatgtttaactttatgaaagtcaaaaagttgttgtttttaatgaaatttttc 32004513  T
Q  156 tatttttgacatccttaac 174  Q
    ||||||| ||||| |||||    
T  32004514 tatttttaacatctttaac 32004532  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 52; E-Value: 5e-21
Query Start/End: Original strand, 64 - 173
Target Start/End: Original strand, 779744 - 779855
Alignment:
Q  64 attaatatataaattatgcattgaaaattagtgaaaagtagaatgtttaactttataaaagt-taaaaagttgttg-ttttaatgaaaaatatttatttt 161  Q
    ||||||||| ||||||||||||  ||||| ||||||||| |||||||||||||||| |||||  |||||||||||| |||||||||||| | | ||||||    
T  779744 attaatatagaaattatgcatttgaaattggtgaaaagttgaatgtttaactttatgaaagtcaaaaaagttgttgtttttaatgaaaattttctatttt 779843  T
Q  162 tgacatccttaa 173  Q
    |||||| |||||    
T  779844 tgacattcttaa 779855  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 52; E-Value: 5e-21
Query Start/End: Original strand, 65 - 175
Target Start/End: Complemental strand, 35803610 - 35803499
Alignment:
Q  65 ttaatatataaattatgcattgaaaattagtgaaaagtagaatgtttaactttataaaagttaaaaagttgttg-ttttaatgaaaaatatttatttttg 163  Q
    |||||||| ||||||||||||||||||| || ||||||  ||| |||||||||||||| |||||||| |||||| ||||||||||   | ||||||||||    
T  35803610 ttaatatagaaattatgcattgaaaattggtaaaaagtgaaatatttaactttataaacgttaaaaaattgttgtttttaatgaattttttttatttttg 35803511  T
Q  164 acatccttaacc 175  Q
    ||||| ||||||    
T  35803510 acatcattaacc 35803499  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 57 - 175
Target Start/End: Original strand, 46737248 - 46737367
Alignment:
Q  57 taagaaaattaatatataaattatgcattgaaaattagtgaaaagtagaatgtttaactttataaaagttaaaaagttgttg-ttttaatgaaaaatatt 155  Q
    |||||| || |||||| ||||| ||||||| |||||  |||||||| |||||||||||||||| ||| | |||||||| ||| |||||||||||| | |     
T  46737248 taagaagataaatatagaaattctgcattggaaattgatgaaaagtggaatgtttaactttatgaaaatcaaaaagttattgtttttaatgaaaattttc 46737347  T
Q  156 tatttttgacatccttaacc 175  Q
    ||||||||| ||||||||||    
T  46737348 tatttttgaaatccttaacc 46737367  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 57 - 175
Target Start/End: Complemental strand, 55292397 - 55292278
Alignment:
Q  57 taagaaaattaatatataaattatgcattgaaaattagtgaaaagtagaatgtttaactttataaaagttaaaaagttgttg-ttttaatgaaaaatatt 155  Q
    |||||| ||||||||| |||||||| ||| |||||| ||||||| |  ||||||||| ||||| ||| | |||||||||||| |||||||||||||  |     
T  55292397 taagaagattaatatagaaattatgtattaaaaattggtgaaaactgaaatgtttaattttatgaaaatcaaaaagttgttgtttttaatgaaaaaattc 55292298  T
Q  156 tatttttgacatccttaacc 175  Q
    ||||||||| ||||||||||    
T  55292297 tatttttgatatccttaacc 55292278  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 45; E-Value: 8e-17
Query Start/End: Original strand, 57 - 175
Target Start/End: Complemental strand, 27924096 - 27923974
Alignment:
Q  57 taagaaaattaatatataaattatgcattgaaaattagtgaaaagtagaatgtttaactttataaaagt---taaaaagttgttg-ttttaatgaaaaat 152  Q
    |||||| ||||||||| ||||||||||||| ||||| ||| ||||| ||||||||||||||||||| ||    ||||| |||||| ||||||||||   |    
T  27924096 taagaagattaatatagaaattatgcattggaaattggtggaaagttgaatgtttaactttataaaggtaaaaaaaaaattgttgtttttaatgaatttt 27923997  T
Q  153 atttatttttgacatccttaacc 175  Q
     || |||||||||||||||||||    
T  27923996 tttaatttttgacatccttaacc 27923974  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 61 - 175
Target Start/End: Original strand, 53599336 - 53599450
Alignment:
Q  61 aaaattaatatataaattatgcattgaaaattagtgaaaagtagaatgtttaactttataaaagttaaaaagttgttgttttaatgaaaaatatttattt 160  Q
    |||||||||||| ||||||| ||||  |||||  |||||| |  ||||||||||||||| ||||| |||||||| ||||||| |  ||||| | ||||||    
T  53599336 aaaattaatatagaaattatacattagaaattgatgaaaaatgtaatgtttaactttatgaaagtaaaaaagttattgtttttaataaaaaaaattattt 53599435  T
Q  161 ttgacatccttaacc 175  Q
    |||||||| ||||||    
T  53599436 ttgacatctttaacc 53599450  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 57 - 142
Target Start/End: Original strand, 38179836 - 38179921
Alignment:
Q  57 taagaaaattaatatataaattatgcattgaaaattagtgaaaagtagaatgtttaactttataaaagttaaaaagttgttgtttt 142  Q
    |||||| ||||||||| |||||||| |||  |||||  |||||||| |||||||||||||||| ||||| ||||||||| ||||||    
T  38179836 taagaagattaatatagaaattatgtattagaaatttatgaaaagttgaatgtttaactttatgaaagtcaaaaagttgatgtttt 38179921  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 64 - 174
Target Start/End: Original strand, 47769663 - 47769770
Alignment:
Q  64 attaatatataaattatgcattgaaaattagtgaaaagtagaatgtttaactttataaaagttaaaaagttgttgttttaatgaaaaatatttatttttg 163  Q
    ||||||||| |||||||| |||||||||| |||||  ||  ||||||||||||||||||| | ||||| ||  | |||||||||||| | | ||||||||    
T  47769663 attaatataaaaattatgtattgaaaattggtgaa--gtgaaatgtttaactttataaaaatcaaaaaatttgt-ttttaatgaaaattttatatttttg 47769759  T
Q  164 acatccttaac 174  Q
    ||||| |||||    
T  47769760 acatctttaac 47769770  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 20 - 59
Target Start/End: Complemental strand, 50727626 - 50727587
Alignment:
Q  20 atgacctatattacagagggtaaaaacctattaaccctaa 59  Q
    |||||||||||||||| |||||||||||||||||||||||    
T  50727626 atgacctatattacagggggtaaaaacctattaaccctaa 50727587  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 20 - 59
Target Start/End: Complemental strand, 50735640 - 50735601
Alignment:
Q  20 atgacctatattacagagggtaaaaacctattaaccctaa 59  Q
    |||||||||||||||| |||||||||||||||||||||||    
T  50735640 atgacctatattacagggggtaaaaacctattaaccctaa 50735601  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 23 - 57
Target Start/End: Original strand, 6595268 - 6595302
Alignment:
Q  23 acctatattacagagggtaaaaacctattaaccct 57  Q
    |||||||||||||||||||||||||||||||||||    
T  6595268 acctatattacagagggtaaaaacctattaaccct 6595302  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 20 - 57
Target Start/End: Complemental strand, 22272966 - 22272929
Alignment:
Q  20 atgacctatattacagagggtaaaaacctattaaccct 57  Q
    |||||||||||||||| |||||||||||||||||||||    
T  22272966 atgacctatattacagggggtaaaaacctattaaccct 22272929  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 20 - 56
Target Start/End: Original strand, 46094261 - 46094297
Alignment:
Q  20 atgacctatattacagagggtaaaaacctattaaccc 56  Q
    |||||||||||||||||||||||| ||||||||||||    
T  46094261 atgacctatattacagagggtaaagacctattaaccc 46094297  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 67 - 131
Target Start/End: Original strand, 49767573 - 49767637
Alignment:
Q  67 aatatataaattatgcattgaaaattagtgaaaagtagaatgtttaactttataaaagttaaaaa 131  Q
    |||||| |||||  ||||||||||||  ||||||||  |||||||||||||||||||||| ||||    
T  49767573 aatataaaaattcagcattgaaaattgatgaaaagtgaaatgtttaactttataaaagtttaaaa 49767637  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 20 - 59
Target Start/End: Original strand, 35539801 - 35539840
Alignment:
Q  20 atgacctatattacagagggtaaaaacctattaaccctaa 59  Q
    |||||||||||||||| ||||||| |||||||||||||||    
T  35539801 atgacctatattacagggggtaaatacctattaaccctaa 35539840  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 82 - 152
Target Start/End: Complemental strand, 53920282 - 53920211
Alignment:
Q  82 cattgaaaattagtgaaaagtagaatgtttaactttataaaagttaaaaagttgttgt-tttaatgaaaaat 152  Q
    ||||| ||| || ||| |||| |||||||| |||||| |||||| ||||||||||||| |||||||||||||    
T  53920282 cattggaaaataatgagaagtggaatgtttcactttagaaaagtcaaaaagttgttgtctttaatgaaaaat 53920211  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 25 - 59
Target Start/End: Complemental strand, 9001475 - 9001441
Alignment:
Q  25 ctatattacagagggtaaaaacctattaaccctaa 59  Q
    ||||||||||| |||||||||||||||||||||||    
T  9001475 ctatattacagggggtaaaaacctattaaccctaa 9001441  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 20 - 58
Target Start/End: Original strand, 11563538 - 11563576
Alignment:
Q  20 atgacctatattacagagggtaaaaacctattaacccta 58  Q
    |||||||||||||||| ||||||| ||||||||||||||    
T  11563538 atgacctatattacagggggtaaagacctattaacccta 11563576  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 20 - 58
Target Start/End: Original strand, 37273416 - 37273454
Alignment:
Q  20 atgacctatattacagagggtaaaaacctattaacccta 58  Q
    |||||||||||||||| ||||||| ||||||||||||||    
T  37273416 atgacctatattacagggggtaaagacctattaacccta 37273454  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 20 - 57
Target Start/End: Original strand, 20125439 - 20125476
Alignment:
Q  20 atgacctatattacagagggtaaaaacctattaaccct 57  Q
    |||||||||||||||| ||||||| |||||||||||||    
T  20125439 atgacctatattacagggggtaaagacctattaaccct 20125476  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 20 - 57
Target Start/End: Complemental strand, 21780158 - 21780121
Alignment:
Q  20 atgacctatattacagagggtaaaaacctattaaccct 57  Q
    |||||||||||||||| ||||||| |||||||||||||    
T  21780158 atgacctatattacagggggtaaagacctattaaccct 21780121  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 20 - 57
Target Start/End: Original strand, 24215762 - 24215799
Alignment:
Q  20 atgacctatattacagagggtaaaaacctattaaccct 57  Q
    |||||||||||||||| ||||||| |||||||||||||    
T  24215762 atgacctatattacagggggtaaagacctattaaccct 24215799  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 94 - 162
Target Start/End: Complemental strand, 43134531 - 43134465
Alignment:
Q  94 gtgaaaagtagaatgtttaactttataaaagttaaaaagttgttgttttaatgaaaaatatttattttt 162  Q
    |||| |||||||||||| |||||| | ||||||||||||||||  |||| ||||||||| | |||||||    
T  43134531 gtgataagtagaatgttcaactttttgaaagttaaaaagttgt--tttttatgaaaaatttctattttt 43134465  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 20 - 56
Target Start/End: Complemental strand, 550709 - 550673
Alignment:
Q  20 atgacctatattacagagggtaaaaacctattaaccc 56  Q
    |||||||||||||||| ||||||| ||||||||||||    
T  550709 atgacctatattacagggggtaaagacctattaaccc 550673  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 20 - 56
Target Start/End: Original strand, 3525889 - 3525925
Alignment:
Q  20 atgacctatattacagagggtaaaaacctattaaccc 56  Q
    |||||||||||||||||||||||| || |||||||||    
T  3525889 atgacctatattacagagggtaaagacttattaaccc 3525925  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 20 - 64
Target Start/End: Complemental strand, 18510019 - 18509975
Alignment:
Q  20 atgacctatattacagagggtaaaaacctattaaccctaagaaaa 64  Q
    |||||||||||||||| || |||||  ||||||||||||||||||    
T  18510019 atgacctatattacaggggataaaacactattaaccctaagaaaa 18509975  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 23 - 59
Target Start/End: Complemental strand, 39868501 - 39868465
Alignment:
Q  23 acctatattacagagggtaaaaacctattaaccctaa 59  Q
    ||||||||||||| |||||||||||||||| ||||||    
T  39868501 acctatattacagggggtaaaaacctattatccctaa 39868465  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 20 - 76
Target Start/End: Complemental strand, 44519493 - 44519437
Alignment:
Q  20 atgacctatattacagagggtaaaaacctattaaccctaagaaaattaatatataaa 76  Q
    ||||||| ||||||||  |||||| ||||||||||||||| | | ||||||||||||    
T  44519493 atgacctctattacaggaggtaaagacctattaaccctaaaatatttaatatataaa 44519437  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 20 - 56
Target Start/End: Complemental strand, 50138524 - 50138488
Alignment:
Q  20 atgacctatattacagagggtaaaaacctattaaccc 56  Q
    |||||||||||||||| ||||||| ||||||||||||    
T  50138524 atgacctatattacagggggtaaagacctattaaccc 50138488  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 58; Significance: 1e-24; HSPs: 17)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 58; E-Value: 1e-24
Query Start/End: Original strand, 57 - 173
Target Start/End: Original strand, 39075000 - 39075114
Alignment:
Q  57 taagaaaattaatatataaattatgcattgaaaattagtgaaaagtagaatgtttaactttataaaagttaaaaagttgttgttttaatgaaaaatattt 156  Q
    |||||| ||||||||| |||||||||||||||||||  | ||| || |||||||||||||||||||||| ||||||||||  |||||||||||| | | |    
T  39075000 taagaagattaatatagaaattatgcattgaaaattgataaaaggtggaatgtttaactttataaaagtcaaaaagttgt--ttttaatgaaaattttct 39075097  T
Q  157 atttttgacatccttaa 173  Q
    ||||||| |||||||||    
T  39075098 atttttggcatccttaa 39075114  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 57 - 175
Target Start/End: Complemental strand, 3247797 - 3247678
Alignment:
Q  57 taagaaaattaatatataaattatgcattgaaaattagtgaaaagtagaatgtttaactttataaaagttaaaaagttgttgtttt-aatgaaaaatatt 155  Q
    |||||| ||||||||| || ||||||||| |||||| |||||||||  |||||||||||| || ||||| |||||||||||||||| |||||||  | ||    
T  3247797 taagaagattaatatagaagttatgcattaaaaattggtgaaaagtgtaatgtttaacttcatgaaagtaaaaaagttgttgttttcaatgaaatttttt 3247698  T
Q  156 tatttttgacatccttaacc 175  Q
    ||||| ||||||||||||||    
T  3247697 tatttatgacatccttaacc 3247678  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 57 - 142
Target Start/End: Complemental strand, 40197732 - 40197647
Alignment:
Q  57 taagaaaattaatatataaattatgcattgaaaattagtgaaaagtagaatgtttaactttataaaagttaaaaagttgttgtttt 142  Q
    |||||| ||||||||| ||||||||||||| ||||||||||||||| |||||||||| ||||||||| | ||||| | ||||||||    
T  40197732 taagaagattaatatagaaattatgcattggaaattagtgaaaagtggaatgtttaattttataaaaataaaaaaatcgttgtttt 40197647  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 95 - 174
Target Start/End: Complemental strand, 4828952 - 4828872
Alignment:
Q  95 tgaaaagtagaatgtttaactttataaaagttaaaaagttgttg-ttttaatgaaaaatatttatttttgacatccttaac 174  Q
    ||||||||||||| ||||||||||| |||||||||| ||||||| |||||||||||| | | |||||||||  ||||||||    
T  4828952 tgaaaagtagaatatttaactttatgaaagttaaaaggttgttgtttttaatgaaaattttctatttttgaactccttaac 4828872  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 61 - 152
Target Start/End: Original strand, 26362447 - 26362538
Alignment:
Q  61 aaaattaatatataaattatgcattgaaaattagtgaaaagtagaatgtttaactttataaaagttaaaaagttgttgttttaatgaaaaat 152  Q
    |||| ||||||| ||||| | |||||  || | |||||||||| ||| || |||||||| ||||| |||||||||||||||| |||||||||    
T  26362447 aaaactaatataaaaattttacattgggaagtggtgaaaagtaaaatattcaactttatgaaagtcaaaaagttgttgtttttatgaaaaat 26362538  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 61 - 152
Target Start/End: Complemental strand, 22732232 - 22732140
Alignment:
Q  61 aaaattaatatataaattatgcattgaaaattagtgaaaagtagaatgtttaactttataaaagttaaaaagttgttg-ttttaatgaaaaat 152  Q
    |||| ||||||| || || ||||||||||| | |||||||||||||| || |||||||| ||| | ||||| || ||| ||||||||||||||    
T  22732232 aaaactaatatagaagttttgcattgaaaagtggtgaaaagtagaatattcaactttatgaaattcaaaaaattattgtttttaatgaaaaat 22732140  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 20 - 56
Target Start/End: Original strand, 36993004 - 36993040
Alignment:
Q  20 atgacctatattacagagggtaaaaacctattaaccc 56  Q
    |||||||||||||||||||||||| ||||||||||||    
T  36993004 atgacctatattacagagggtaaagacctattaaccc 36993040  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 20 - 59
Target Start/End: Complemental strand, 22551558 - 22551519
Alignment:
Q  20 atgacctatattacagagggtaaaaacctattaaccctaa 59  Q
    |||||||||||||||| ||||||| |||||||||||||||    
T  22551558 atgacctatattacagggggtaaagacctattaaccctaa 22551519  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 20 - 59
Target Start/End: Original strand, 37205001 - 37205040
Alignment:
Q  20 atgacctatattacagagggtaaaaacctattaaccctaa 59  Q
    |||||||||||||||||||||||| || ||||||||||||    
T  37205001 atgacctatattacagagggtaaagacatattaaccctaa 37205040  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 20 - 58
Target Start/End: Original strand, 10976768 - 10976806
Alignment:
Q  20 atgacctatattacagagggtaaaaacctattaacccta 58  Q
    |||||||||||||||| ||||||| ||||||||||||||    
T  10976768 atgacctatattacagggggtaaagacctattaacccta 10976806  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 21 - 59
Target Start/End: Complemental strand, 15395579 - 15395541
Alignment:
Q  21 tgacctatattacagagggtaaaaacctattaaccctaa 59  Q
    |||||||| |||||| |||||||||||||||||||||||    
T  15395579 tgacctattttacagggggtaaaaacctattaaccctaa 15395541  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 20 - 54
Target Start/End: Original strand, 16305130 - 16305164
Alignment:
Q  20 atgacctatattacagagggtaaaaacctattaac 54  Q
    |||||||||||||||||||||||| ||||||||||    
T  16305130 atgacctatattacagagggtaaagacctattaac 16305164  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 20 - 57
Target Start/End: Complemental strand, 26034881 - 26034844
Alignment:
Q  20 atgacctatattacagagggtaaaaacctattaaccct 57  Q
    |||||||||||| ||||||||||| |||||||||||||    
T  26034881 atgacctatattgcagagggtaaagacctattaaccct 26034844  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 20 - 57
Target Start/End: Complemental strand, 29104480 - 29104443
Alignment:
Q  20 atgacctatattacagagggtaaaaacctattaaccct 57  Q
    |||||||||||||||| ||||||| |||||||||||||    
T  29104480 atgacctatattacagggggtaaagacctattaaccct 29104443  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 21 - 57
Target Start/End: Original strand, 9751698 - 9751734
Alignment:
Q  21 tgacctatattacagagggtaaaaacctattaaccct 57  Q
    ||||||||||||||| |||||||| ||||||||||||    
T  9751698 tgacctatattacagggggtaaaagcctattaaccct 9751734  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 20 - 76
Target Start/End: Complemental strand, 33052853 - 33052797
Alignment:
Q  20 atgacctatattacagagggtaaaaacctattaaccctaagaaaattaatatataaa 76  Q
    |||||||||||||||  ||||||| ||||||||||||||| | | |||||| |||||    
T  33052853 atgacctatattacaaggggtaaagacctattaaccctaaaatatttaatagataaa 33052797  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 21 - 57
Target Start/End: Complemental strand, 38482353 - 38482317
Alignment:
Q  21 tgacctatattacagagggtaaaaacctattaaccct 57  Q
    ||||||||||||||| ||||||| |||||||||||||    
T  38482353 tgacctatattacagggggtaaagacctattaaccct 38482317  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 51; Significance: 2e-20; HSPs: 22)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 64 - 173
Target Start/End: Original strand, 45745515 - 45745625
Alignment:
Q  64 attaatatataaattatgcattgaaaattagtgaaaagtagaatgtttaactttataaaagttaaaaagttgttg-ttttaatgaaaaatatttattttt 162  Q
    ||||||||| |||||||||||||||||||  | |||| | |||||||||||||||| ||||| ||||| |||||| ||||||| |||||| |  ||||||    
T  45745515 attaatatagaaattatgcattgaaaattgataaaaaatggaatgtttaactttatgaaagtcaaaaaattgttgattttaataaaaaatttcaattttt 45745614  T
Q  163 gacatccttaa 173  Q
    |||||||||||    
T  45745615 gacatccttaa 45745625  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 68 - 172
Target Start/End: Original strand, 48861207 - 48861312
Alignment:
Q  68 atatataaattatgcattgaaaattagtgaaaagtagaatgtttaactttataaaagttaaaaagttgttg-ttttaatgaaaaatatttatttttgaca 166  Q
    ||||||||||||||||||||||| | || ||| ||  ||| ||||||||||||||||| ||||| |||||| |||||||||||| | | |||||||||||    
T  48861207 atatataaattatgcattgaaaaatggtaaaaggtgaaatatttaactttataaaagtcaaaaaattgttgtttttaatgaaaattttctatttttgaca 48861306  T
Q  167 tcctta 172  Q
    ||||||    
T  48861307 tcctta 48861312  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 49; E-Value: 3e-19
Query Start/End: Original strand, 57 - 175
Target Start/End: Original strand, 51672510 - 51672630
Alignment:
Q  57 taagaaaattaatatataaattatgcattgaaaattagtgaaaagtagaatgtttaactttataaaagttaaaaagttgttgttt-taatgaa-aaatat 154  Q
    |||||| ||||||||| ||||||||||||  ||||| ||||||| |  ||||||||||||||| |||||||||||| |||||||| |||||||    | |    
T  51672510 taagaagattaatatagaaattatgcattagaaattggtgaaaaatgaaatgtttaactttattaaagttaaaaagctgttgtttataatgaattttttt 51672609  T
Q  155 ttatttttgacatccttaacc 175  Q
    |||||||||||||||||||||    
T  51672610 ttatttttgacatccttaacc 51672630  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 61 - 175
Target Start/End: Original strand, 11083220 - 11083333
Alignment:
Q  61 aaaattaatatataaattatgcattgaaaattagtgaaaagtagaatgtttaactttataaaagttaaaaagttgttgttttaatgaaaaatatttattt 160  Q
    |||||||||||| |||||||||| || |||| |||||||| | ||||||||||||||||||||| |||||| || ||||||| |  |||||| | |||||    
T  11083220 aaaattaatatagaaattatgcaatggaaatgagtgaaaaatggaatgtttaactttataaaag-taaaaaattattgtttttaataaaaatttctattt 11083318  T
Q  161 ttgacatccttaacc 175  Q
    || ||||| ||||||    
T  11083319 ttaacatctttaacc 11083333  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 57 - 135
Target Start/End: Complemental strand, 24924655 - 24924577
Alignment:
Q  57 taagaaaattaatatataaattatgcattgaaaattagtgaaaagtagaatgtttaactttataaaagttaaaaagttg 135  Q
    |||||| ||||||||| |||||||||||| |||||| |||||||||| |||||||| |||||| |||||||||| ||||    
T  24924655 taagaagattaatatagaaattatgcattaaaaattggtgaaaagtataatgtttagctttatgaaagttaaaacgttg 24924577  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 45; E-Value: 8e-17
Query Start/End: Original strand, 60 - 163
Target Start/End: Original strand, 34809148 - 34809252
Alignment:
Q  60 gaaaattaatatataaattatgcattgaaaattagtgaaaagtagaatgtttaactttataaaagttaaaaagttgttg-ttttaatgaaaaatatttat 158  Q
    ||||| ||||||| ||| | |||||||| || | |||||||||||||||||||||||||| ||||| ||||| |||||| ||||||| ||||| || |||    
T  34809148 gaaaactaatatagaaactttgcattgagaaatggtgaaaagtagaatgtttaactttatgaaagtcaaaaaattgttgcttttaataaaaaaaatctat 34809247  T
Q  159 ttttg 163  Q
    |||||    
T  34809248 ttttg 34809252  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 61 - 162
Target Start/End: Original strand, 26502775 - 26502877
Alignment:
Q  61 aaaattaatatataaattatgcattgaaaattagtgaaaagtagaatgtttaactttataaaagttaaaaagttgttgt-tttaatgaaaaatatttatt 159  Q
    |||| ||||||||||| | |||||||| || | | ||||||||||||||| |||||| ||||||| ||||||||||||| ||| ||||||||| | ||||    
T  26502775 aaaactaatatataaactttgcattgagaagtggcgaaaagtagaatgttcaactttttaaaagtcaaaaagttgttgtgttttatgaaaaatttctatt 26502874  T
Q  160 ttt 162  Q
    |||    
T  26502875 ttt 26502877  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 83 - 151
Target Start/End: Original strand, 31311490 - 31311559
Alignment:
Q  83 attgaaaattagtgaaaagtagaatgtttaactttataaaagttaaaaagttgttg-ttttaatgaaaaa 151  Q
    |||| ||| ||| |||||||||||||||||| ||||| ||||| ||||||||| || |||||||||||||    
T  31311490 attggaaagtagagaaaagtagaatgtttaattttatgaaagtcaaaaagttgatgtttttaatgaaaaa 31311559  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 20 - 71
Target Start/End: Complemental strand, 7272597 - 7272546
Alignment:
Q  20 atgacctatattacagagggtaaaaacctattaaccctaagaaaattaatat 71  Q
    ||||||||||||| || ||||||||  |||||||||||||||||||| ||||    
T  7272597 atgacctatattagagggggtaaaatactattaaccctaagaaaattgatat 7272546  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 20 - 59
Target Start/End: Original strand, 49872970 - 49873009
Alignment:
Q  20 atgacctatattacagagggtaaaaacctattaaccctaa 59  Q
    |||||||||||||||| ||||||| |||||||||||||||    
T  49872970 atgacctatattacagggggtaaagacctattaaccctaa 49873009  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 57 - 142
Target Start/End: Original strand, 52201301 - 52201383
Alignment:
Q  57 taagaaaattaatatataaattatgcattgaaaattagtgaaaagtagaatgtttaactttataaaagttaaaaagttgttgtttt 142  Q
    |||||| ||||||||||||||| || |||  ||||| || ||||||  |||||||||||||   ||||| ||||||||||||||||    
T  52201301 taagaagattaatatataaattttggattagaaattggtaaaaagtgaaatgtttaacttt---aaagtcaaaaagttgttgtttt 52201383  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 20 - 58
Target Start/End: Complemental strand, 6510251 - 6510213
Alignment:
Q  20 atgacctatattacagagggtaaaaacctattaacccta 58  Q
    |||||||||||||||| ||||||| ||||||||||||||    
T  6510251 atgacctatattacagggggtaaagacctattaacccta 6510213  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 21 - 59
Target Start/End: Complemental strand, 12066264 - 12066226
Alignment:
Q  21 tgacctatattacagagggtaaaaacctattaaccctaa 59  Q
    ||||||||||||||| ||||||||| |||||||||||||    
T  12066264 tgacctatattacagggggtaaaaaactattaaccctaa 12066226  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 20 - 57
Target Start/End: Original strand, 14220707 - 14220744
Alignment:
Q  20 atgacctatattacagagggtaaaaacctattaaccct 57  Q
    |||||||||||||||||||||||||  |||||||||||    
T  14220707 atgacctatattacagagggtaaaatactattaaccct 14220744  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 20 - 57
Target Start/End: Original strand, 14224934 - 14224971
Alignment:
Q  20 atgacctatattacagagggtaaaaacctattaaccct 57  Q
    |||||||||||||||||||||||||  |||||||||||    
T  14224934 atgacctatattacagagggtaaaatactattaaccct 14224971  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 20 - 57
Target Start/End: Original strand, 19624031 - 19624068
Alignment:
Q  20 atgacctatattacagagggtaaaaacctattaaccct 57  Q
    ||||||||||||||||||| |||| |||||||||||||    
T  19624031 atgacctatattacagaggataaagacctattaaccct 19624068  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 20 - 57
Target Start/End: Complemental strand, 20737546 - 20737509
Alignment:
Q  20 atgacctatattacagagggtaaaaacctattaaccct 57  Q
    ||||||||||||| || |||||||||||||||||||||    
T  20737546 atgacctatattatagggggtaaaaacctattaaccct 20737509  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 20 - 57
Target Start/End: Complemental strand, 30271580 - 30271543
Alignment:
Q  20 atgacctatattacagagggtaaaaacctattaaccct 57  Q
    |||||||||||||||||||||||| | |||||||||||    
T  30271580 atgacctatattacagagggtaaagaactattaaccct 30271543  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 20 - 57
Target Start/End: Original strand, 51460784 - 51460821
Alignment:
Q  20 atgacctatattacagagggtaaaaacctattaaccct 57  Q
    |||||||||||||||| ||||||| |||||||||||||    
T  51460784 atgacctatattacagggggtaaagacctattaaccct 51460821  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 20 - 59
Target Start/End: Original strand, 5205375 - 5205415
Alignment:
Q  20 atgacctatattacagaggg-taaaaacctattaaccctaa 59  Q
    |||||||||||||||| ||| ||||||||||||||||||||    
T  5205375 atgacctatattacaggggggtaaaaacctattaaccctaa 5205415  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 20 - 56
Target Start/End: Original strand, 47115583 - 47115619
Alignment:
Q  20 atgacctatattacagagggtaaaaacctattaaccc 56  Q
    |||||||||||||||| ||||||| ||||||||||||    
T  47115583 atgacctatattacagggggtaaagacctattaaccc 47115619  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 20 - 56
Target Start/End: Original strand, 49880758 - 49880794
Alignment:
Q  20 atgacctatattacagagggtaaaaacctattaaccc 56  Q
    |||||||||||||||| ||||||| ||||||||||||    
T  49880758 atgacctatattacagggggtaaagacctattaaccc 49880794  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 49; Significance: 3e-19; HSPs: 24)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 49; E-Value: 3e-19
Query Start/End: Original strand, 64 - 175
Target Start/End: Original strand, 37985156 - 37985267
Alignment:
Q  64 attaatatataaattatgcattgaaaattagtgaaaagtagaatgtttaactttataaaagttaaaaagttgttgttttaatgaaaaatatt-tattttt 162  Q
    ||||||||| ||||||| ||||||||||| |||||||||  |||||| |||||||| ||||| ||||| |||||||||||| | ||||| || |||||||    
T  37985156 attaatatagaaattatacattgaaaattggtgaaaagtgaaatgttaaactttatgaaagtcaaaaa-ttgttgttttaaaggaaaattttctattttt 37985254  T
Q  163 gacatccttaacc 175  Q
    || ||||||||||    
T  37985255 gatatccttaacc 37985267  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 57 - 173
Target Start/End: Original strand, 37807239 - 37807356
Alignment:
Q  57 taagaaaattaatatataaattatgcattgaaaattagtgaaaagtagaatgtttaactttataaaagttaaaaagttgttg-ttttaatgaaaaatatt 155  Q
    |||||| ||||||||| ||||||||||||  ||||| ||||||| |  ||||||||||||||| ||||| |||||| ||||| ||||||| |||||| |     
T  37807239 taagaagattaatatagaaattatgcattacaaattggtgaaaaatgaaatgtttaactttatgaaagtcaaaaaggtgttgtttttaataaaaaatttc 37807338  T
Q  156 tatttttgacatccttaa 173  Q
    ||||||| | ||||||||    
T  37807339 tatttttaatatccttaa 37807356  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 64 - 141
Target Start/End: Original strand, 5963957 - 5964034
Alignment:
Q  64 attaatatataaattatgcattgaaaattagtgaaaagtagaatgtttaactttataaaagttaaaaagttgttgttt 141  Q
    ||||||||| |||||||||||||||||||  |||||||| |||| ||||| ||||| ||||||||||| || ||||||    
T  5963957 attaatataaaaattatgcattgaaaattgatgaaaagtggaatatttaattttatgaaagttaaaaaattattgttt 5964034  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 61 - 142
Target Start/End: Original strand, 32810002 - 32810083
Alignment:
Q  61 aaaattaatatataaattatgcattgaaaattagtgaaaagtagaatgtttaactttataaaagttaaaaagttgttgtttt 142  Q
    |||| ||||||| ||| | |||||||  || | |||||||||| |||||| |||||||||||||| |||| |||||||||||    
T  32810002 aaaactaatatagaaactttgcattgggaagtggtgaaaagtaaaatgttcaactttataaaagtcaaaatgttgttgtttt 32810083  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 74 - 142
Target Start/End: Complemental strand, 33839658 - 33839592
Alignment:
Q  74 aaattatgcattgaaaattagtgaaaagtagaatgtttaactttataaaagttaaaaagttgttgtttt 142  Q
    ||||||||||||||||||| ||||||| |  ||| ||||||||  ||||| ||||||||||||||||||    
T  33839658 aaattatgcattgaaaattggtgaaaaatgaaatatttaactt--taaaaattaaaaagttgttgtttt 33839592  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 20 - 56
Target Start/End: Original strand, 28149687 - 28149723
Alignment:
Q  20 atgacctatattacagagggtaaaaacctattaaccc 56  Q
    |||||||||||||||| ||||||||||||||||||||    
T  28149687 atgacctatattacagggggtaaaaacctattaaccc 28149723  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 57 - 173
Target Start/End: Complemental strand, 31364999 - 31364878
Alignment:
Q  57 taagaaaattaatatataaattatg----cattgaaaattagtgaaaagtagaatgtttaactttataaaagttaaaaagttgttgtttt-aatgaaaaa 151  Q
    |||||||||||||||| |||||||     ||||| ||||| |||||||||  ||| ||||| ||||| ||||| ||||| || || |||| ||| |||||    
T  31364999 taagaaaattaatatagaaattatatatccattggaaattggtgaaaagtgaaatatttaattttatgaaagtcaaaaaattattatttttaataaaaaa 31364900  T
Q  152 tatttatttttgacatccttaa 173  Q
     || ||||||||||||||||||    
T  31364899 aatctatttttgacatccttaa 31364878  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 20 - 56
Target Start/End: Complemental strand, 33641168 - 33641132
Alignment:
Q  20 atgacctatattacagagggtaaaaacctattaaccc 56  Q
    |||||||||||||||||||||||| ||||||||||||    
T  33641168 atgacctatattacagagggtaaagacctattaaccc 33641132  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 20 - 59
Target Start/End: Original strand, 33315446 - 33315485
Alignment:
Q  20 atgacctatattacagagggtaaaaacctattaaccctaa 59  Q
    |||||||||||||||||||||||||  |||||||||||||    
T  33315446 atgacctatattacagagggtaaaatactattaaccctaa 33315485  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 95 - 142
Target Start/End: Complemental strand, 33500151 - 33500104
Alignment:
Q  95 tgaaaagtagaatgtttaactttataaaagttaaaaagttgttgtttt 142  Q
    |||||||| |||||||| || ||||||||||||||||||||| |||||    
T  33500151 tgaaaagtggaatgtttcaccttataaaagttaaaaagttgtcgtttt 33500104  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 20 - 59
Target Start/End: Complemental strand, 34635742 - 34635703
Alignment:
Q  20 atgacctatattacagagggtaaaaacctattaaccctaa 59  Q
    |||||||||||||||| ||||||| |||||||||||||||    
T  34635742 atgacctatattacagggggtaaagacctattaaccctaa 34635703  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 20 - 59
Target Start/End: Original strand, 45464632 - 45464671
Alignment:
Q  20 atgacctatattacagagggtaaaaacctattaaccctaa 59  Q
    ||||||||||||||||  ||||||||||||||||||||||    
T  45464632 atgacctatattacaggaggtaaaaacctattaaccctaa 45464671  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 20 - 58
Target Start/End: Original strand, 19493469 - 19493507
Alignment:
Q  20 atgacctatattacagagggtaaaaacctattaacccta 58  Q
    |||||||||||||||| ||||||| ||||||||||||||    
T  19493469 atgacctatattacagggggtaaagacctattaacccta 19493507  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 20 - 58
Target Start/End: Complemental strand, 20182300 - 20182262
Alignment:
Q  20 atgacctatattacagagggtaaaaacctattaacccta 58  Q
    |||||||||||||||| || |||||||||||||||||||    
T  20182300 atgacctatattacaggggataaaaacctattaacccta 20182262  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 20 - 54
Target Start/End: Original strand, 21302284 - 21302318
Alignment:
Q  20 atgacctatattacagagggtaaaaacctattaac 54  Q
    ||||||||||||||||| |||||||||||||||||    
T  21302284 atgacctatattacagaaggtaaaaacctattaac 21302318  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 20 - 58
Target Start/End: Complemental strand, 22116191 - 22116153
Alignment:
Q  20 atgacctatattacagagggtaaaaacctattaacccta 58  Q
    |||||||||||||||| ||||||| ||||||||||||||    
T  22116191 atgacctatattacagggggtaaagacctattaacccta 22116153  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 20 - 57
Target Start/End: Complemental strand, 17328128 - 17328091
Alignment:
Q  20 atgacctatattacagagggtaaaaacctattaaccct 57  Q
    |||||||||||||||| ||||||| |||||||||||||    
T  17328128 atgacctatattacagggggtaaagacctattaaccct 17328091  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 69 - 142
Target Start/End: Original strand, 18701845 - 18701918
Alignment:
Q  69 tatataaattatgcattgaaaattagtgaaaagtagaatgtttaactttataaaagttaaaaagttgttgtttt 142  Q
    ||||||||||  |||||| |||||  ||||||||| ||| ||  |||||||||||||||||| ||| |||||||    
T  18701845 tatataaatttagcattggaaattgatgaaaagtaaaatattctactttataaaagttaaaatgttattgtttt 18701918  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 23 - 59
Target Start/End: Original strand, 16577371 - 16577407
Alignment:
Q  23 acctatattacagagggtaaaaacctattaaccctaa 59  Q
    ||||||||||||| ||||||| |||||||||||||||    
T  16577371 acctatattacagggggtaaagacctattaaccctaa 16577407  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 20 - 56
Target Start/End: Complemental strand, 19641482 - 19641446
Alignment:
Q  20 atgacctatattacagagggtaaaaacctattaaccc 56  Q
    |||||||||||||||| ||||||| ||||||||||||    
T  19641482 atgacctatattacagggggtaaagacctattaaccc 19641446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 20 - 56
Target Start/End: Complemental strand, 19840075 - 19840039
Alignment:
Q  20 atgacctatattacagagggtaaaaacctattaaccc 56  Q
    |||||||||||||||| ||||||| ||||||||||||    
T  19840075 atgacctatattacagggggtaaagacctattaaccc 19840039  T

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Target: chr2; HSP #22
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 20 - 59
Target Start/End: Complemental strand, 25227860 - 25227820
Alignment:
Q  20 atgacctatattacag-agggtaaaaacctattaaccctaa 59  Q
    |||||||||||||||| |||||||| |||||||||||||||    
T  25227860 atgacctatattacaggagggtaaagacctattaaccctaa 25227820  T

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Target: chr2; HSP #23
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 20 - 56
Target Start/End: Complemental strand, 29835138 - 29835102
Alignment:
Q  20 atgacctatattacagagggtaaaaacctattaaccc 56  Q
    |||||||||||||||| ||||||| ||||||||||||    
T  29835138 atgacctatattacagggggtaaagacctattaaccc 29835102  T

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Target: chr2; HSP #24
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 20 - 56
Target Start/End: Complemental strand, 37147587 - 37147551
Alignment:
Q  20 atgacctatattacagagggtaaaaacctattaaccc 56  Q
    |||||||||||||||| ||||||| ||||||||||||    
T  37147587 atgacctatattacagggggtaaagacctattaaccc 37147551  T

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Target: scaffold0136 (Bit Score: 36; Significance: 0.00000000002; HSPs: 1)
Name: scaffold0136
Description:

Target: scaffold0136; HSP #1
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 20 - 59
Target Start/End: Original strand, 657 - 696
Alignment:
Q  20 atgacctatattacagagggtaaaaacctattaaccctaa 59  Q
    |||||||||||||||||||||||| |||||||||||||||    
T  657 atgacctatattacagagggtaaagacctattaaccctaa 696  T

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Target: scaffold0024 (Bit Score: 34; Significance: 0.0000000003; HSPs: 1)
Name: scaffold0024
Description:

Target: scaffold0024; HSP #1
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 69 - 134
Target Start/End: Original strand, 36255 - 36320
Alignment:
Q  69 tatataaattatgcattgaaaattagtgaaaagtagaatgtttaactttataaaagttaaaaagtt 134  Q
    |||| ||||||||||||| ||||  ||||||| | |||||||||||||||| ||||| ||||||||    
T  36255 tatagaaattatgcattggaaatcggtgaaaaatggaatgtttaactttatgaaagtcaaaaagtt 36320  T

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Target: scaffold0769 (Bit Score: 32; Significance: 0.000000005; HSPs: 1)
Name: scaffold0769
Description:

Target: scaffold0769; HSP #1
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 20 - 59
Target Start/End: Original strand, 4172 - 4211
Alignment:
Q  20 atgacctatattacagagggtaaaaacctattaaccctaa 59  Q
    |||||||||||||||| ||||||| |||||||||||||||    
T  4172 atgacctatattacagggggtaaagacctattaaccctaa 4211  T

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Target: scaffold0450 (Bit Score: 32; Significance: 0.000000005; HSPs: 1)
Name: scaffold0450
Description:

Target: scaffold0450; HSP #1
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 20 - 59
Target Start/End: Original strand, 8116 - 8155
Alignment:
Q  20 atgacctatattacagagggtaaaaacctattaaccctaa 59  Q
    |||||||||||||||| ||||||| |||||||||||||||    
T  8116 atgacctatattacagtgggtaaagacctattaaccctaa 8155  T

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Target: scaffold0010 (Bit Score: 32; Significance: 0.000000005; HSPs: 2)
Name: scaffold0010
Description:

Target: scaffold0010; HSP #1
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 20 - 59
Target Start/End: Original strand, 26554 - 26593
Alignment:
Q  20 atgacctatattacagagggtaaaaacctattaaccctaa 59  Q
    ||||||||||||||| |||||||| |||||||||||||||    
T  26554 atgacctatattacaaagggtaaacacctattaaccctaa 26593  T

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Target: scaffold0010; HSP #2
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 20 - 56
Target Start/End: Complemental strand, 26344 - 26308
Alignment:
Q  20 atgacctatattacagagggtaaaaacctattaaccc 56  Q
    |||||||||||||||| ||||||| ||||||||||||    
T  26344 atgacctatattacagggggtaaagacctattaaccc 26308  T

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Target: scaffold0809 (Bit Score: 31; Significance: 0.00000002; HSPs: 1)
Name: scaffold0809
Description:

Target: scaffold0809; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 20 - 74
Target Start/End: Complemental strand, 3804 - 3751
Alignment:
Q  20 atgacctatattacagagggtaaaaacctattaaccctaagaaaattaatatata 74  Q
    |||||||||||||||| ||||||| ||||||||||| ||| |||||| |||||||    
T  3804 atgacctatattacag-gggtaaagacctattaaccttaataaaattgatatata 3751  T

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Target: scaffold0032 (Bit Score: 30; Significance: 0.00000007; HSPs: 1)
Name: scaffold0032
Description:

Target: scaffold0032; HSP #1
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 20 - 57
Target Start/End: Complemental strand, 91086 - 91049
Alignment:
Q  20 atgacctatattacagagggtaaaaacctattaaccct 57  Q
    |||||||||||||||| ||||||| |||||||||||||    
T  91086 atgacctatattacagggggtaaagacctattaaccct 91049  T

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Target: scaffold0384 (Bit Score: 29; Significance: 0.0000003; HSPs: 1)
Name: scaffold0384
Description:

Target: scaffold0384; HSP #1
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 20 - 56
Target Start/End: Original strand, 4448 - 4484
Alignment:
Q  20 atgacctatattacagagggtaaaaacctattaaccc 56  Q
    |||||||||||||||| ||||||| ||||||||||||    
T  4448 atgacctatattacagggggtaaagacctattaaccc 4484  T

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Target: scaffold0142 (Bit Score: 29; Significance: 0.0000003; HSPs: 1)
Name: scaffold0142
Description:

Target: scaffold0142; HSP #1
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 20 - 56
Target Start/End: Original strand, 34847 - 34883
Alignment:
Q  20 atgacctatattacagagggtaaaaacctattaaccc 56  Q
    |||||||||||||||| ||||||| ||||||||||||    
T  34847 atgacctatattacagggggtaaagacctattaaccc 34883  T

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Target: scaffold0031 (Bit Score: 29; Significance: 0.0000003; HSPs: 1)
Name: scaffold0031
Description:

Target: scaffold0031; HSP #1
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 20 - 56
Target Start/End: Complemental strand, 1863 - 1827
Alignment:
Q  20 atgacctatattacagagggtaaaaacctattaaccc 56  Q
    |||||||||||||||| ||||||| ||||||||||||    
T  1863 atgacctatattacagggggtaaagacctattaaccc 1827  T

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