View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
|
Alignment Overview
Query: NF10188_high_5 (Length: 354)
Name: NF10188_high_5
Description: NF10188
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF10188_high_5 |
 | |
|
| [»] scaffold0521 (1 HSPs) |
| | |
|
| [»] scaffold0359 (1 HSPs) |
| | |
|
| [»] scaffold0226 (4 HSPs) |
| | |
|
| [»] scaffold0103 (3 HSPs) |
| | |
|
| [»] scaffold0213 (1 HSPs) |
| | |
|
| [»] scaffold0020 (1 HSPs) |
| | |
|
| [»] scaffold0008 (1 HSPs) |
| | |
|
Alignment Details
Target: scaffold0521 (Bit Score: 301; Significance: 1e-169; HSPs: 1)
Name: scaffold0521
Description:
Target: scaffold0521; HSP #1
Raw Score: 301; E-Value: 1e-169
Query Start/End: Original strand, 1 - 313
Target Start/End: Complemental strand, 5683 - 5371
Alignment:
| Q |
1 |
aggaatttatttttcctctgctctatgtggtgaaggatgttgaaacatccagtttgtaggcaacttatgtttcctctctgcatcataggaatttattttt |
100 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||| |
|
|
| T |
5683 |
aggaatttatttttcctctgctctatgtggtgaaggatgttgaaacatccagtttgtaggcaacttatgtttcctctctgtatcataggaatttattttt |
5584 |
T |
|
| Q |
101 |
cctcttctcttgtgagactatgcttttttatcttatatgctgctgcatatctctgatcaagtgtaatacctctactagctgaagttgtgattgaagactc |
200 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
5583 |
cctcttctcttgtgagactatgcttttttatcttatatgctgctgcatatctctaatcaagtgtaatacctctactagctgaagttgtgattgaagactc |
5484 |
T |
|
| Q |
201 |
gtgaggtattctatgtatgcacactcttgctatctctagagtgatattgtctgctactccttcttcttgaatatgtgttcatgatgacttgaggaagtgt |
300 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
5483 |
gtgaggtattctatgtatgcacactcttgctatctctagagtgatattgtttgctactccttcttcttgaatatgtgttcatgatgacttgaggaagtgt |
5384 |
T |
|
| Q |
301 |
atctaaagtatct |
313 |
Q |
| |
|
||||||||||||| |
|
|
| T |
5383 |
atctaaagtatct |
5371 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5 (Bit Score: 211; Significance: 1e-115; HSPs: 3)
Name: chr5
Description:
Target: chr5; HSP #1
Raw Score: 211; E-Value: 1e-115
Query Start/End: Original strand, 4 - 341
Target Start/End: Original strand, 22250846 - 22251183
Alignment:
| Q |
4 |
aatttatttttcctctgctctatgtggtgaaggatgttgaaacatccagtttgtaggcaacttatgtttcctctctgcatcataggaatttatttttcct |
103 |
Q |
| |
|
||||||||||||||||||||||||| ||||||||||| ||||||| ||||||||| ||||||||||||||||||| | |||||||||||||||||||| |
|
|
| T |
22250846 |
aatttatttttcctctgctctatgttgtgaaggatgtctgaacatccggtttgtagggaacttatgtttcctctctgtagcataggaatttatttttcct |
22250945 |
T |
|
| Q |
104 |
cttctcttgtgagactatgcttttttatcttatatgctgctgcatatctctgatcaagtgtaatacctctactagctgaagttgtgattgaagactcgtg |
203 |
Q |
| |
|
| |||||||||||||||| | ||| |||| || |||||| ||| |||||||||||||||||||||||||| |||||||| ||||||||||||||| || |
|
|
| T |
22250946 |
atgctcttgtgagactatgatattt-atctgatccgctgctacatgtctctgatcaagtgtaatacctctaccagctgaagctgtgattgaagactcctg |
22251044 |
T |
|
| Q |
204 |
aggtattctatgtatgcacactctt-gctatctctagagtgatattgtctgctactccttcttcttgaatatgtgttcatgatgacttgaggaagtgtat |
302 |
Q |
| |
|
||||||||||||||||||||||||| |||||||||||||||||| ||| |||||||||||||||||||||||||||| ||||||||||||||||||||| |
|
|
| T |
22251045 |
aggtattctatgtatgcacactctttgctatctctagagtgatactgtttgctactccttcttcttgaatatgtgttggtgatgacttgaggaagtgtat |
22251144 |
T |
|
| Q |
303 |
ctaaagtatctctttagattctgtgtgcttgctgtttct |
341 |
Q |
| |
|
|||| | ||||| ||||||| |||||||||||||||||| |
|
|
| T |
22251145 |
ctaaggcatctccttagattatgtgtgcttgctgtttct |
22251183 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #2
Raw Score: 141; E-Value: 7e-74
Query Start/End: Original strand, 1 - 340
Target Start/End: Complemental strand, 26038138 - 26037800
Alignment:
| Q |
1 |
aggaatttatttttcctctgctct-atgtggtgaaggatgttgaaacatccagtttgta-ggcaacttatgtttcctctctgcatcataggaatttattt |
98 |
Q |
| |
|
|||||||||||||||||||||| | |||| |||||||| |||| |||||||| | |||| || ||||||||||||||||||| | ||||||||||||||| |
|
|
| T |
26038138 |
aggaatttatttttcctctgctattatgtagtgaaggaggttggaacatccaatgtgtatgggaacttatgtttcctctctgtagcataggaatttattt |
26038039 |
T |
|
| Q |
99 |
ttcctcttctcttgtgagactatgcttttttatcttatatgctgctgcatatctctgatcaagtgtaatacctctactagctgaagttgtgattgaagac |
198 |
Q |
| |
|
||||||| |||||||||||||||||| | ||||||| |||||||||| ||| |||| ||||||||||||||||| |||||||| | |||| ||||| |
|
|
| T |
26038038 |
ttcctctgctcttgtgagactatgctaat--atcttatccgctgctgcatgtctatgat-aagtgtaatacctctac-agctgaagctatgatagaagat |
26037943 |
T |
|
| Q |
199 |
tc-gtgaggtattctatgtatgcacactcttgctatctctagagtgatattgtc-tgctactccttcttcttgaatatgtgttcatgatgacttgaggaa |
296 |
Q |
| |
|
| |||||||||||| |||||||||||| || ||||||| ||||||| ||| ||||||||||||||||||||||||| ||| ||||||||||||||| |
|
|
| T |
26037942 |
tatgtgaggtattct-tgtatgcacacttctgatatctctttagtgatactgttatgctactccttcttcttgaatatgtattcgtgatgacttgaggaa |
26037844 |
T |
|
| Q |
297 |
gtgtatctaaagtatctctttagattctgtgtgcttgctgtttc |
340 |
Q |
| |
|
|||||||||| ||||| ||||||||| |||||||| |||||||| |
|
|
| T |
26037843 |
gtgtatctaaggtatccctttagattatgtgtgctagctgtttc |
26037800 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #3
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 260 - 329
Target Start/End: Complemental strand, 23624942 - 23624874
Alignment:
| Q |
260 |
cttcttcttgaatatgtgttcatgatgacttgaggaagtgtatctaaagtatctctttagattctgtgtg |
329 |
Q |
| |
|
|||||||||||||||||||| ||||||||||||||||||||| ||| ||| ||||||||||| |||||| |
|
|
| T |
23624942 |
cttcttcttgaatatgtgtttatgatgacttgaggaagtgta-ataaggtacctctttagattgtgtgtg |
23624874 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8 (Bit Score: 207; Significance: 1e-113; HSPs: 1)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 207; E-Value: 1e-113
Query Start/End: Original strand, 3 - 341
Target Start/End: Complemental strand, 22477427 - 22477090
Alignment:
| Q |
3 |
gaatttatttttcctctgctctatgtggtgaaggatgttgaaacatccagtttgtaggcaacttatgtttcctctctgcatcataggaatttatttttcc |
102 |
Q |
| |
|
||||||||||||||| || ||||||| ||||||||||| |||||||| |||||||| ||||||||||||||||||| | ||||||||||||||||||| |
|
|
| T |
22477427 |
gaatttatttttcctatgttctatgttgtgaaggatgtctgaacatccaatttgtagggaacttatgtttcctctctgtagcataggaatttatttttcc |
22477328 |
T |
|
| Q |
103 |
tcttctcttgtgagactatgcttttttatcttatatgctgctgcatatctctgatcaagtgtaatacctctactagctgaagttgtgattgaagactcgt |
202 |
Q |
| |
|
||| ||||||||||||||| || ||| |||| || |||||||||| |||||||||||||||||||||||||| |||||||| |||||||||||| |||| |
|
|
| T |
22477327 |
tctgctcttgtgagactatcctattt-atctgatccgctgctgcatgtctctgatcaagtgtaatacctctaccagctgaagctgtgattgaagattcgt |
22477229 |
T |
|
| Q |
203 |
gaggtattctatgtatgcacactcttgctatctctagagtgatattgtctgctactccttcttcttgaatatgtgttcatgatgacttgaggaagtgtat |
302 |
Q |
| |
|
||||||||||||||||||||| ||||||||||||| |||||||| ||||||||||| ||||||||||||||||||||||| ||| |||||| |||||||| |
|
|
| T |
22477228 |
gaggtattctatgtatgcacaatcttgctatctctggagtgatactgtctgctactacttcttcttgaatatgtgttcataatggcttgagaaagtgtat |
22477129 |
T |
|
| Q |
303 |
ctaaagtatctctttagattctgtgtgcttgctgtttct |
341 |
Q |
| |
|
|||| || ||||||||||||||||||||| | ||||||| |
|
|
| T |
22477128 |
ctaaggtgtctctttagattctgtgtgctagttgtttct |
22477090 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0359 (Bit Score: 204; Significance: 1e-111; HSPs: 1)
Name: scaffold0359
Description:
Target: scaffold0359; HSP #1
Raw Score: 204; E-Value: 1e-111
Query Start/End: Original strand, 1 - 341
Target Start/End: Complemental strand, 3247 - 2906
Alignment:
| Q |
1 |
aggaatttatttttcctctgctctatgtggtgaaggatgttgaaacatccagtttgtaggcaacttatgtttcctctctgcatcataggaatttattttt |
100 |
Q |
| |
|
|||| |||||||||| |||||||||||| |||||||||||| ||||||| |||| |||| ||||||||||||||||||| | ||||||||||||||||| |
|
|
| T |
3247 |
aggactttatttttcttctgctctatgttgtgaaggatgtttgaacatccggtttatagggaacttatgtttcctctctgtaacataggaatttattttt |
3148 |
T |
|
| Q |
101 |
cctcttctcttgtgagactatgcttttttatcttatatgctgctgcatatctctgatcaagtgtaatacctctactagctgaagttgtgattgaagactc |
200 |
Q |
| |
|
||||| ||||||||||||||| || ||||||| || | |||||||| |||||||||||||||||||||||||| |||||||||||||||||||| || |
|
|
| T |
3147 |
cctctgctcttgtgagactatt-ttatttatctgattcgttgctgcatgtctctgatcaagtgtaatacctctaccagctgaagttgtgattgaagcttc |
3049 |
T |
|
| Q |
201 |
gtgaggtattctatgtatgcacactcttgctatctctagagtgatattgt--ctgctactccttcttcttgaatatgtgttcatgatgacttgaggaagt |
298 |
Q |
| |
|
||||||||||||||| ||||||||||||||||||||| ||||||| |||| || ||||| |||||||||| |||||||||| ||||||||||||||||| |
|
|
| T |
3048 |
gtgaggtattctatgaatgcacactcttgctatctctggagtgatgttgttgctactacttcttcttcttggatatgtgttcgtgatgacttgaggaagt |
2949 |
T |
|
| Q |
299 |
gtatctaaagtatctctttagattctgtgtgcttgctgtttct |
341 |
Q |
| |
|
|||||||| |||||||||||||||||||||||| ||||||||| |
|
|
| T |
2948 |
gtatctaaggtatctctttagattctgtgtgctagctgtttct |
2906 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3 (Bit Score: 189; Significance: 1e-102; HSPs: 9)
Name: chr3
Description:
Target: chr3; HSP #1
Raw Score: 189; E-Value: 1e-102
Query Start/End: Original strand, 1 - 341
Target Start/End: Original strand, 15571806 - 15572148
Alignment:
| Q |
1 |
aggaatttatttttcctctgctctatgtggtgaaggatgttgaaacatccagtttgtaggcaacttatgtttcctctctgcatcataggaatttattt-t |
99 |
Q |
| |
|
||||||||||||||||| |||| ||||| ||||||||||||||||||| ||||||||||| |||| ||||||||||| || | ||||||||||||||| | |
|
|
| T |
15571806 |
aggaatttatttttcctatgctttatgttgtgaaggatgttgaaacatgcagtttgtagggaactcatgtttcctctatgtagcataggaatttatttct |
15571905 |
T |
|
| Q |
100 |
tcctcttctcttgtgagactatgcttttttatcttatatgctgctgcatatctctgatcaagtgtaatacctctactagctgaagttgtgattgaagact |
199 |
Q |
| |
|
||||| |||||||||||||||||| ||| |||| || |||||||||| |||||||||||||||||||||||||| ||||||||||| ||||||||||| |
|
|
| T |
15571906 |
tcctcagctcttgtgagactatgctattt-atctgatccgctgctgcatgtctctgatcaagtgtaatacctctaccagctgaagttgagattgaagact |
15572004 |
T |
|
| Q |
200 |
cgtgaggtattctatgtatgcacactcttgct--atctctagagtgatattgtctgctactccttcttcttgaatatgtgttcatgatgacttgaggaag |
297 |
Q |
| |
|
|||||||||||||||||||||||||| ||| ||||||| ||| ||| || |||||||| ||||||||||||||||||||| ||||||||||||||| |
|
|
| T |
15572005 |
cgtgaggtattctatgtatgcacacttcggctacatctctatagtcatactgcctgctacttcttcttcttgaatatgtgttcgtgatgacttgaggaaa |
15572104 |
T |
|
| Q |
298 |
tgtatctaaagtatctctttagattctgtgtgcttgctgtttct |
341 |
Q |
| |
|
||||||||| ||||||||||||||| | |||||| ||||||||| |
|
|
| T |
15572105 |
tgtatctaaggtatctctttagattttatgtgctagctgtttct |
15572148 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #2
Raw Score: 179; E-Value: 1e-96
Query Start/End: Original strand, 37 - 341
Target Start/End: Complemental strand, 19635153 - 19634854
Alignment:
| Q |
37 |
atgttgaaacatccagtttgtaggcaacttatgtttcctctctgcatcataggaatttatttttcctcttctcttgtgagactatgcttttttatcttat |
136 |
Q |
| |
|
|||||||||||||||||| ||||| ||||||||||||||||||| | |||||||||||||||||||||| ||||||||||||||| || ||| ||| || |
|
|
| T |
19635153 |
atgttgaaacatccagtt-gtagggaacttatgtttcctctctgtagcataggaatttatttttcctctgctcttgtgagactattctattt-atccgat |
19635056 |
T |
|
| Q |
137 |
atgctgctgcatatctctgatcaagtgtaatacctctactagctgaagttgtgattgaagactcgtgaggtattctatgtatgcacactcttgctatctc |
236 |
Q |
| |
|
|||| ||||| |||||||||||||||||||||||||| |||||||| ||||||||||| ||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
19635055 |
ccgctgttgcatgtctctgatcaagtgtaatacctctaccagctgaagatgtgattgaagtctcgtgaggtattctatgtatgcacactcttgctatctc |
19634956 |
T |
|
| Q |
237 |
tagagtgatattgtctgctactccttcttcttgaatatgtgttcatgatgacttgaggaagtgtatctaaagtatctctttagattctgtgtgcttgctg |
336 |
Q |
| |
|
|| |||||| | ||||||||||| |||||||||||||||| ||||||||||||||||||||||||| ||||||||||||||| |||||||||| || |
|
|
| T |
19634955 |
tacagtgattctacctgctactcct---tcttgaatatgtgttcgtgatgacttgaggaagtgtatctaaggtatctctttagattatgtgtgcttgttg |
19634859 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #3
Raw Score: 147; E-Value: 2e-77
Query Start/End: Original strand, 143 - 341
Target Start/End: Original strand, 18482317 - 18482515
Alignment:
| Q |
143 |
ctgcatatctctgatcaagtgtaatacctctactagctgaagttgtgattgaagactcgtgaggtattctatgtatgcacactcttgctatctctagagt |
242 |
Q |
| |
|
|||||| |||||||||||||||||||||||||| ||||||| || |||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
18482317 |
ctgcatgtctctgatcaagtgtaatacctctaccagctgaaactgagattgaagactcgtgaggtattctatgtatgcacactcttgctatctctagagt |
18482416 |
T |
|
| Q |
243 |
gatattgtctgctactccttcttcttgaatatgtgttcatgatgacttgaggaagtgtatctaaagtatctctttagattctgtgtgcttgctgtttct |
341 |
Q |
| |
|
|||| || |||||| ||||||||||||||||||||| ||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||| |
|
|
| T |
18482417 |
gatactgcttgctacctcttcttcttgaatatgtgttcgtgatgacttgaggaagtgtatctaagatatctctttagattctgtgtgcttgctgtttct |
18482515 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #4
Raw Score: 105; E-Value: 2e-52
Query Start/End: Original strand, 84 - 256
Target Start/End: Complemental strand, 17703236 - 17703065
Alignment:
| Q |
84 |
cataggaatttatttttcctcttctcttgtgagactatgcttttttatcttatatgctgctgcatatctctgatcaagtgtaatacctctactagctgaa |
183 |
Q |
| |
|
|||||||||||||||||||||| |||||||||||||||||| ||| |||| || |||||||||| ||||||||||||| |||||||||||| | ||||| |
|
|
| T |
17703236 |
cataggaatttatttttcctctgctcttgtgagactatgctattt-atctgattcgctgctgcatgtctctgatcaagtctaatacctctaccatctgaa |
17703138 |
T |
|
| Q |
184 |
gttgtgattgaagactcgtgaggtattctatgtatgcacactcttgctatctctagagtgatattgtctgcta |
256 |
Q |
| |
|
|||||||||||||| |||||||||||||||||||||||||||||| |||| ||| ||| |||||||| ||||| |
|
|
| T |
17703137 |
gttgtgattgaagattcgtgaggtattctatgtatgcacactctttctatttctggagagatattgtgtgcta |
17703065 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #5
Raw Score: 104; E-Value: 9e-52
Query Start/End: Original strand, 87 - 270
Target Start/End: Original strand, 17702882 - 17703064
Alignment:
| Q |
87 |
aggaatttatttttcctcttctcttgtgagactatgcttttttatcttatatgctgctgcatatctctgatcaagtgtaatacctctactagctgaagtt |
186 |
Q |
| |
|
||||||||||||||||||| |||||||||||||||||| ||| |||| || ||||||||| ||||||||||||| |||||||||||| | |||||||| |
|
|
| T |
17702882 |
aggaatttatttttcctctgctcttgtgagactatgctattt-atctgattccctgctgcatgtctctgatcaagtctaatacctctaccatctgaagtt |
17702980 |
T |
|
| Q |
187 |
gtgattgaagactcgtgaggtattctatgtatgcacactcttgctatctctagagtgatattgtctgctactccttcttcttga |
270 |
Q |
| |
|
||||||||||| ||||||||||||||||||||||||||||||||||| || ||| |||||||| ||||| | ||||||||||| |
|
|
| T |
17702981 |
gtgattgaagattcgtgaggtattctatgtatgcacactcttgctatttcgggagggatattgtgtgctattacttcttcttga |
17703064 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #6
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 67 - 306
Target Start/End: Original strand, 18043676 - 18043913
Alignment:
| Q |
67 |
atgtttcctctctgcatcataggaatttatttttcctcttctcttgtgagactatgcttttttatcttatatgctgctgcatatctctgatcaagtgtaa |
166 |
Q |
| |
|
||||| ||||| || | |||||||||||||||||| ||| || |||||||||| ||| | | ||||||| | || ||||| ||||||||||||||||| |
|
|
| T |
18043676 |
atgttccctctttgtaacataggaatttatttttcatctgctattgtgagactttgcatat--atcttatccgttgttgcatgtctctgatcaagtgtaa |
18043773 |
T |
|
| Q |
167 |
tacctctactagctgaagttgtgattgaagactcgtgaggtattctatgtatgcacactcttgctatctctagagtgatattgtc-tgctactccttctt |
265 |
Q |
| |
|
|||||||| || ||||| ||| ||||||||||| ||||||||||| |||| |||||| | || || || ||||||| | || |||||||||||||| |
|
|
| T |
18043774 |
tacctctaacagttgaagctgtaattgaagactcttgaggtattct-tgtacgcacacgcctgttaattcattagtgatactatcatgctactccttctt |
18043872 |
T |
|
| Q |
266 |
cttgaatatgtgttcatgatgacttgaggaagtgtatctaa |
306 |
Q |
| |
|
||||||||||||||| ||||||||||||||||||||||||| |
|
|
| T |
18043873 |
cttgaatatgtgttcgtgatgacttgaggaagtgtatctaa |
18043913 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #7
Raw Score: 74; E-Value: 7e-34
Query Start/End: Original strand, 67 - 302
Target Start/End: Original strand, 18059707 - 18059940
Alignment:
| Q |
67 |
atgtttcctctctgcatcataggaatttatttttcctcttctcttgtgagactatgcttttttatcttatatgctgctgcatatctctgatcaagtgtaa |
166 |
Q |
| |
|
||||| ||||| || | |||||||||||||||||| ||| || |||||||||| ||| | | ||||||| | || ||||| ||||||||||||||||| |
|
|
| T |
18059707 |
atgttccctctttgtaacataggaatttatttttcatctgctattgtgagactttgcatat--atcttatccgttgttgcatgtctctgatcaagtgtaa |
18059804 |
T |
|
| Q |
167 |
tacctctactagctgaagttgtgattgaagactcgtgaggtattctatgtatgcacactcttgctatctctagagtgatattgtc-tgctactccttctt |
265 |
Q |
| |
|
|||||||| || ||||| ||| ||||||||||| ||||||| ||| |||| |||||| | || || || ||||||| | || |||||||||||||| |
|
|
| T |
18059805 |
tacctctaacagttgaagctgtaattgaagactcttgaggtactct-tgtacgcacacgcctgttaattcattagtgatactatcatgctactccttctt |
18059903 |
T |
|
| Q |
266 |
cttgaatatgtgttcatgatgacttgaggaagtgtat |
302 |
Q |
| |
|
||||||||||||||| ||||||||||||||||||||| |
|
|
| T |
18059904 |
cttgaatatgtgttcgtgatgacttgaggaagtgtat |
18059940 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #8
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 1 - 117
Target Start/End: Original strand, 18043526 - 18043644
Alignment:
| Q |
1 |
aggaatttatttttcctctgctctat-gtggtgaaggatgttgaaacatccagtttgta-ggcaacttatgtttcctctctgcatcataggaatttattt |
98 |
Q |
| |
|
||||||||||||||||||| |||| | ||||||||||||||| |||||||| | |||| || ||||||||||||| ||||| | || |||||||||||| |
|
|
| T |
18043526 |
aggaatttatttttcctcttctcttttgtggtgaaggatgtttgaacatccaatgtgtatgggaacttatgtttccactctgtagcaaaggaatttattt |
18043625 |
T |
|
| Q |
99 |
ttcctcttctcttgtgaga |
117 |
Q |
| |
|
||||||| ||||||||||| |
|
|
| T |
18043626 |
ttcctctgctcttgtgaga |
18043644 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #9
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 1 - 117
Target Start/End: Original strand, 18059557 - 18059675
Alignment:
| Q |
1 |
aggaatttatttttcctctgctctat-gtggtgaaggatgttgaaacatccagtttgta-ggcaacttatgtttcctctctgcatcataggaatttattt |
98 |
Q |
| |
|
||||||||||||||||||| |||| | ||||||||||||||| |||||||| | |||| || ||||||||||||| ||||| | || |||||||||||| |
|
|
| T |
18059557 |
aggaatttatttttcctcttctcttttgtggtgaaggatgtttgaacatccaatgtgtatgggaacttatgtttccactctgtagcaaaggaatttattt |
18059656 |
T |
|
| Q |
99 |
ttcctcttctcttgtgaga |
117 |
Q |
| |
|
||||||| ||||||||||| |
|
|
| T |
18059657 |
ttcctctgctcttgtgaga |
18059675 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7 (Bit Score: 156; Significance: 8e-83; HSPs: 4)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 156; E-Value: 8e-83
Query Start/End: Original strand, 1 - 341
Target Start/End: Original strand, 16221377 - 16221715
Alignment:
| Q |
1 |
aggaatttatttttcctctgctct--atgtggtgaaggatgttgaaacatcca--gtttgtaggcaacttatgtttcctctctgcatcataggaatttat |
96 |
Q |
| |
|
||||||||||||||||||| |||| | || |||||||||||||||||||||| |||||| || |||||||||||||| |||| | ||||||||||||| |
|
|
| T |
16221377 |
aggaatttatttttcctctactctggaggt-gtgaaggatgttgaaacatccattgtttgt-gggaacttatgtttcctttctgtagcataggaatttat |
16221474 |
T |
|
| Q |
97 |
ttttcctcttctcttgtgagactatgcttttttatcttatatgctgctgcatatctctgatcaagtgtaatacctctactagctgaagttgtgattgaag |
196 |
Q |
| |
|
||||||||| ||||||||||||||||| | ||||||||||| |||||||| ||||||| | ||||||||||||||||||||||||| ||||||||||| |
|
|
| T |
16221475 |
ttttcctctgctcttgtgagactatgc--atatatcttatatgttgctgcatgtctctga-cgagtgtaatacctctactagctgaagctgtgattgaag |
16221571 |
T |
|
| Q |
197 |
actcgtgaggtattctatgtatgcacactcttgctatctctagagtgatattgtctgctactccttcttcttgaatatgtgttcatgatgacttgaggaa |
296 |
Q |
| |
|
|||| |||| ||||||| ||| |||||| || || ||| ||||||| |||||||||||| |||||||||||||||||||| ||||||||||||||| |
|
|
| T |
16221572 |
actcatgagatattcta-gtaagcacacatctgttacttctttagtgatactgtctgctactcattcttcttgaatatgtgttcgtgatgacttgaggaa |
16221670 |
T |
|
| Q |
297 |
gtgtatctaaagtatctctttagattctgtgtgcttgctgtttct |
341 |
Q |
| |
|
|||||||||| ||||| |||||||||||||||||| | ||||||| |
|
|
| T |
16221671 |
gtgtatctaaggtatccctttagattctgtgtgctagttgtttct |
16221715 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #2
Raw Score: 150; E-Value: 3e-79
Query Start/End: Original strand, 10 - 342
Target Start/End: Complemental strand, 14166503 - 14166176
Alignment:
| Q |
10 |
tttttcctctgctctatgtggtgaaggatgttgaaacatccagtttgtaggcaacttatgtttcctctctgcatcataggaatttatttttcctcttctc |
109 |
Q |
| |
|
||||||||||||||| ||||||||||||||||| ||||||| | | ||| |||||||||| ||| || | | |||||||||||||||||| | ||| |
|
|
| T |
14166503 |
tttttcctctgctct-tgtggtgaaggatgttggaacatcctctgtacagg-aacttatgttccctagttgtagcttaggaatttatttttcctttgctc |
14166406 |
T |
|
| Q |
110 |
ttgtgagactatgcttttttatcttatatgctgctgcatatctctgatcaagtgtaatacctctactagctgaagttgtgattgaagactcgtgaggtat |
209 |
Q |
| |
|
||| |||| |||| || |||| || |||||||||| ||||||||| |||||||||||||||| |||| ||| |||||||||||||||||||||||| |
|
|
| T |
14166405 |
ttg--agacaatgccatta-atctgatccgctgctgcatgtctctgatctagtgtaatacctctaccagctaaagctgtgattgaagactcgtgaggtat |
14166309 |
T |
|
| Q |
210 |
tctatgtatgcacactcttgctatctctagagtgatattgtctgctactccttcttcttgaatatgtgttcatgatgacttgaggaagtgtatctaaagt |
309 |
Q |
| |
|
||| ||||||||||||||||||| ||||||||||||| || ||||||| ||||||||||||||||||||| ||||||||||||||||||||||||| || |
|
|
| T |
14166308 |
tctctgtatgcacactcttgctacctctagagtgatactgcttgctacttcttcttcttgaatatgtgttcgtgatgacttgaggaagtgtatctaaggt |
14166209 |
T |
|
| Q |
310 |
atctctttagattctgtgtgcttgctgtttctg |
342 |
Q |
| |
|
|||||||||||| ||||||||| |||||||||| |
|
|
| T |
14166208 |
atctctttagatcctgtgtgctagctgtttctg |
14166176 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #3
Raw Score: 59; E-Value: 6e-25
Query Start/End: Original strand, 240 - 321
Target Start/End: Complemental strand, 10662671 - 10662589
Alignment:
| Q |
240 |
agtgatattgtct-gctactccttcttcttgaatatgtgttcatgatgacttgaggaagtgtatctaaagtatctctttagat |
321 |
Q |
| |
|
||||||||||||| ||| |||||||||||||||||||||||| |||||||||||||||||||||| || |||||||||||||| |
|
|
| T |
10662671 |
agtgatattgtcttgctgctccttcttcttgaatatgtgttcgtgatgacttgaggaagtgtatcgaaggtatctctttagat |
10662589 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #4
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 84 - 123
Target Start/End: Complemental strand, 10662873 - 10662834
Alignment:
| Q |
84 |
cataggaatttatttttcctcttctcttgtgagactatgc |
123 |
Q |
| |
|
|||||||||||||| ||||||| ||||||||||||||||| |
|
|
| T |
10662873 |
cataggaatttattcttcctctgctcttgtgagactatgc |
10662834 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1 (Bit Score: 152; Significance: 2e-80; HSPs: 6)
Name: chr1
Description:
Target: chr1; HSP #1
Raw Score: 152; E-Value: 2e-80
Query Start/End: Original strand, 6 - 341
Target Start/End: Original strand, 22890652 - 22890984
Alignment:
| Q |
6 |
tttatttttcctctgctctatgtggtgaaggatgttgaaacatcca--gtttgtaggcaacttatgtttcctctctgcatcataggaatttatttttcct |
103 |
Q |
| |
|
||||||||||||||| ||||||| ||||||||||| |||||||||| |||||| || ||||| ||||||||||||| | |||||||||||||||||||| |
|
|
| T |
22890652 |
tttatttttcctctggtctatgttgtgaaggatgtcgaaacatccattgtttgtggg-aacttgtgtttcctctctgtagcataggaatttatttttcct |
22890750 |
T |
|
| Q |
104 |
cttctcttgtgagactatgcttttttatcttatatgctgctgcatatctctgatcaagtgtaatacctctactagctgaagttgtgattgaagactcgtg |
203 |
Q |
| |
|
|| ||||| ||||||||||| | | ||||||| |||||||||| |||||||| ||||||||||||||||| ||| |||| |||||||||||||||||| |
|
|
| T |
22890751 |
ctgctcttatgagactatgcatat--atcttattcgctgctgcatgtctctgat-aagtgtaatacctctaccagcagaagctgtgattgaagactcgtg |
22890847 |
T |
|
| Q |
204 |
aggtattctatgtatgcacactcttgctatctctagagtgatattgtctgctactccttcttcttgaatatgtgttcatgatgacttgaggaagtgtatc |
303 |
Q |
| |
|
|||||||||| ||| |||||| || || ||| ||||||| || |||||||| ||||||||||||||||||||| |||||||||||||||||||||| |
|
|
| T |
22890848 |
aggtattcta-gtaagcacacgtctgttacttctttagtgatactgcctgctacttcttcttcttgaatatgtgttcgtgatgacttgaggaagtgtatc |
22890946 |
T |
|
| Q |
304 |
taaagtatctctttagattctgtgtgcttgctgtttct |
341 |
Q |
| |
|
||| ||||| ||||||||| | |||||| ||||||||| |
|
|
| T |
22890947 |
taaggtatccctttagattatttgtgctagctgtttct |
22890984 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #2
Raw Score: 128; E-Value: 4e-66
Query Start/End: Original strand, 1 - 331
Target Start/End: Original strand, 20199893 - 20200221
Alignment:
| Q |
1 |
aggaatttatttttcctctgctcta-tgtggtgaaggatgttgaaacatcca--gtttgtaggcaacttatgtttcctctctgcatcataggaatttatt |
97 |
Q |
| |
|
||||||||||||||||||||||||| ||| |||||||||| ||||||||||| |||||| || |||||||||||||||||| | |||||||||||| | |
|
|
| T |
20199893 |
aggaatttatttttcctctgctctaatgttgtgaaggatgctgaaacatccactgtttgtggg-aacttatgtttcctctctatagcataggaatttaat |
20199991 |
T |
|
| Q |
98 |
tttcctcttctcttgtgagactatgcttttttatcttatatgctgctgcatatctctgatcaagtgtaatacctctactagctgaagttgtgattgaaga |
197 |
Q |
| |
|
|| ||||| | ||||||||||||||| | | ||||||| | || ||||| | |||||| ||||| |||||| ||| |||||||| |||||||||||| |
|
|
| T |
20199992 |
ttccctctgcacttgtgagactatgcatat--atcttattcgttgttgcatgtttctgat-aagtgcaatacccttac-agctgaagctgtgattgaaga |
20200087 |
T |
|
| Q |
198 |
ctcgtgaggtattctatgtatgcacactcttgctatctctagagtgatattgtctgctactccttcttcttgaatatgtgttcatgatgacttgaggaag |
297 |
Q |
| |
|
|| |||||||||||||||||||||||| |||||| ||| ||||| ||||| |||||||| |||||||||||||||||||||||||| ||||||||||| |
|
|
| T |
20200088 |
ttcttgaggtattctatgtatgcacacttctgctatatcttgagtggtattgcctgctacttcttcttcttgaatatgtgttcatgataacttgaggaag |
20200187 |
T |
|
| Q |
298 |
tgtatctaaagtatctctttagattctgtgtgct |
331 |
Q |
| |
|
||||||| | ||||| |||||||| | |||||| |
|
|
| T |
20200188 |
tgtatctgaggtatccttttagattatatgtgct |
20200221 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #3
Raw Score: 73; E-Value: 3e-33
Query Start/End: Original strand, 13 - 224
Target Start/End: Original strand, 20850540 - 20850748
Alignment:
| Q |
13 |
ttcctctgctctatgtggtgaaggatgttgaaacatccagtttgtaggcaacttatgtttcctctctgcatcataggaatttatttttcctcttctcttg |
112 |
Q |
| |
|
|||||||||||||||| |||||||||||||||||||||| | ||| | || |||| ||||| |||| | |||| |||||| ||||||| || |||||| |
|
|
| T |
20850540 |
ttcctctgctctatgttgtgaaggatgttgaaacatccattgtgtggagaagttatttttccactctatagcatatgaatttgtttttccactactcttg |
20850639 |
T |
|
| Q |
113 |
tgagactatgcttttttatcttatatgctgctgcatatctctgatcaagtgtaatacctctactagctgaagttgtgattgaagactcgtgaggtattct |
212 |
Q |
| |
|
||||||||||| | || |||||| || |||||||| |||||||| |||||||||| |||| | | |||||| | |||||||||| | ||||||||||| |
|
|
| T |
20850640 |
tgagactatgcatatt--tcttatctgttgctgcatgtctctgataaagtgtaatatctctgc-aactgaagctttgattgaagatccttgaggtattct |
20850736 |
T |
|
| Q |
213 |
atgtatgcacac |
224 |
Q |
| |
|
|||||||||||| |
|
|
| T |
20850737 |
atgtatgcacac |
20850748 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #4
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 252 - 328
Target Start/End: Complemental strand, 1990339 - 1990263
Alignment:
| Q |
252 |
tgctactccttcttcttgaatatgtgttcatgatgacttgaggaagtgtatctaaagtatctctttagattctgtgt |
328 |
Q |
| |
|
|||||||| |||||||||||||||||||| ||||||||||||||||||||||||| ||||||||||||||| ||||| |
|
|
| T |
1990339 |
tgctactctttcttcttgaatatgtgttcgtgatgacttgaggaagtgtatctaaggtatctctttagattatgtgt |
1990263 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #5
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 255 - 341
Target Start/End: Original strand, 20859510 - 20859596
Alignment:
| Q |
255 |
tactccttcttcttgaatatgtgttcatgatgacttgaggaagtgtatctaaagtatctctttagattctgtgtgcttgctgtttct |
341 |
Q |
| |
|
|||| ||||||||| ||||||||||| ||||||| ||||||| ||||||||| ||||| ||||||||||||| |||| | ||||||| |
|
|
| T |
20859510 |
tacttcttcttcttaaatatgtgttcctgatgacatgaggaaatgtatctaaggtatccctttagattctgtttgctagttgtttct |
20859596 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #6
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 13 - 51
Target Start/End: Original strand, 20199820 - 20199858
Alignment:
| Q |
13 |
ttcctctgctctatgtggtgaaggatgttgaaacatcca |
51 |
Q |
| |
|
|||||||||||||||||||||||||||||| || ||||| |
|
|
| T |
20199820 |
ttcctctgctctatgtggtgaaggatgttggaaaatcca |
20199858 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6 (Bit Score: 138; Significance: 4e-72; HSPs: 6)
Name: chr6
Description:
Target: chr6; HSP #1
Raw Score: 138; E-Value: 4e-72
Query Start/End: Original strand, 1 - 341
Target Start/End: Original strand, 21722215 - 21722549
Alignment:
| Q |
1 |
aggaatttatttttcctctgctctatgtggtgaaggatgttgaaacatccagtttgtaggcaacttatgtttcctctctgcatcataggaatttattttt |
100 |
Q |
| |
|
||||||||||||||||||||||||| ||| |||||||| | ||| ||||| | | ||| |||||||||| ||| || | | ||||||||||||||| |
|
|
| T |
21722215 |
aggaatttatttttcctctgctcta-gtgatgaaggatatggaa-catcctctgtacagg-aacttatgttccctagttgtagcttaggaatttattttt |
21722311 |
T |
|
| Q |
101 |
cctcttctcttgtgagactatgcttttttatcttatatgctgctgcatatctctgatcaagtgtaatacctctactagctgaagttgtgattgaagactc |
200 |
Q |
| |
|
||| | |||||| |||||||||| || | || || |||||||||| ||| ||||| |||||||||||||||| | ||||| ||||||||||||||| |
|
|
| T |
21722312 |
cctttgctcttg--agactatgctattgaa-ctgattcgctgctgcatgtctttgatctagtgtaatacctctaccatttgaagctgtgattgaagactc |
21722408 |
T |
|
| Q |
201 |
gtgaggtattctatgtatgcacactcttgctatctctagagtgatattgtctgctactccttcttcttgaatatgtgttcatgatgacttgaggaagtgt |
300 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||| ||||||||| || |||||||| |||||||||||||||||||| ||||||||||||||||||| |
|
|
| T |
21722409 |
gtgaggtattctatgtatgcacactcttgctatctcgagagtgatactgcctgctacttattcttcttgaatatgtgttcgtgatgacttgaggaagtgt |
21722508 |
T |
|
| Q |
301 |
atctaaagtatctctttagattctgtgtgcttgctgtttct |
341 |
Q |
| |
|
|||||| ||||||||||||||||| ||||| ||||||||| |
|
|
| T |
21722509 |
atctaaggtatctctttagattctaagtgctagctgtttct |
21722549 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #2
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 240 - 329
Target Start/End: Original strand, 23880717 - 23880807
Alignment:
| Q |
240 |
agtgatattgtct-gctactccttcttcttgaatatgtgttcatgatgacttgaggaagtgtatctaaagtatctctttagattctgtgtg |
329 |
Q |
| |
|
||||||||||||| |||||||||||||||||||||||||||| |||||||| |||||| ||||||||| || |||||||||| | |||||| |
|
|
| T |
23880717 |
agtgatattgtcttgctactccttcttcttgaatatgtgttcgtgatgactcgaggaaatgtatctaaggtgtctctttagactgtgtgtg |
23880807 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #3
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 282 - 341
Target Start/End: Original strand, 13869488 - 13869547
Alignment:
| Q |
282 |
tgatgacttgaggaagtgtatctaaagtatctctttagattctgtgtgcttgctgtttct |
341 |
Q |
| |
|
||||||||||||||||| ||||||| |||||||||||||||||||||||| | ||||||| |
|
|
| T |
13869488 |
tgatgacttgaggaagtatatctaaggtatctctttagattctgtgtgctagttgtttct |
13869547 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #4
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 84 - 124
Target Start/End: Original strand, 23880513 - 23880553
Alignment:
| Q |
84 |
cataggaatttatttttcctcttctcttgtgagactatgct |
124 |
Q |
| |
|
|||||||||||||||||| ||| |||||||||||||||||| |
|
|
| T |
23880513 |
cataggaatttatttttcttctgctcttgtgagactatgct |
23880553 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #5
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 311 - 341
Target Start/End: Complemental strand, 25970724 - 25970694
Alignment:
| Q |
311 |
tctctttagattctgtgtgcttgctgtttct |
341 |
Q |
| |
|
||||||||||||||||||||||||||||||| |
|
|
| T |
25970724 |
tctctttagattctgtgtgcttgctgtttct |
25970694 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #6
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 311 - 341
Target Start/End: Complemental strand, 25975164 - 25975134
Alignment:
| Q |
311 |
tctctttagattctgtgtgcttgctgtttct |
341 |
Q |
| |
|
||||||||||||||||||||||||||||||| |
|
|
| T |
25975164 |
tctctttagattctgtgtgcttgctgtttct |
25975134 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0226 (Bit Score: 131; Significance: 7e-68; HSPs: 4)
Name: scaffold0226
Description:
Target: scaffold0226; HSP #1
Raw Score: 131; E-Value: 7e-68
Query Start/End: Original strand, 1 - 341
Target Start/End: Original strand, 16930 - 17265
Alignment:
| Q |
1 |
aggaatttatttttcctctgctcta-tgtggtgaaggatgttgaaacatccagtttgta-ggcaacttatgtttcctctctgcatcataggaatttattt |
98 |
Q |
| |
|
||||||||||||||||||| ||||| ||| |||||||||||||||||||||| | |||| || ||||||||||||||||||| | ||||||||||||||| |
|
|
| T |
16930 |
aggaatttatttttcctcttctctagtgttgtgaaggatgttgaaacatccaatgtgtacgggaacttatgtttcctctctgtagcataggaatttattt |
17029 |
T |
|
| Q |
99 |
ttcctcttctcttgtgagactatgcttttttatcttatatgctgctgcatatctctgatcaagtgtaatacctctactagctgaagttgtgattgaagac |
198 |
Q |
| |
|
||||||| |||||| ||||||||| | |||||||| ||| |||||| |||||||| |||||||||||||| |||| ||| ||||||||||||| |
|
|
| T |
17030 |
ttcctctgctcttggaagactatgc--atatatcttatccgcttctgcatgtctctgat-gagtgtaatacctct-taagctaaagctgtgattgaagac |
17125 |
T |
|
| Q |
199 |
tcgtgaggtattctatgtatgcacactcttgctatctctagagtgatattgtc-tgctactccttcttcttgaatatgtgttcatgatgacttgaggaag |
297 |
Q |
| |
|
|||||||||||||| ||||||||||| || || || ||||||| | || |||| ||||||||||||||||||||||| |||||||||||||||| |
|
|
| T |
17126 |
tcgtgaggtattct-tgtatgcacacatctgtta---ctttagtgatactatcaggctattccttcttcttgaatatgtgttcgtgatgacttgaggaag |
17221 |
T |
|
| Q |
298 |
tgtatctaaagtatctctttagattctgtgtgcttgctgtttct |
341 |
Q |
| |
|
||||||||| |||||||||||||||||||||||| ||| ||||| |
|
|
| T |
17222 |
tgtatctaaggtatctctttagattctgtgtgctagctatttct |
17265 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0226; HSP #2
Raw Score: 131; E-Value: 7e-68
Query Start/End: Original strand, 1 - 341
Target Start/End: Original strand, 26324 - 26659
Alignment:
| Q |
1 |
aggaatttatttttcctctgctcta-tgtggtgaaggatgttgaaacatccagtttgta-ggcaacttatgtttcctctctgcatcataggaatttattt |
98 |
Q |
| |
|
||||||||||||||||||| ||||| ||| |||||||||||||||||||||| | |||| || ||||||||||||||||||| | ||||||||||||||| |
|
|
| T |
26324 |
aggaatttatttttcctcttctctagtgttgtgaaggatgttgaaacatccaatgtgtacgggaacttatgtttcctctctgtagcataggaatttattt |
26423 |
T |
|
| Q |
99 |
ttcctcttctcttgtgagactatgcttttttatcttatatgctgctgcatatctctgatcaagtgtaatacctctactagctgaagttgtgattgaagac |
198 |
Q |
| |
|
||||||| |||||| ||||||||| | |||||||| ||| |||||| |||||||| |||||||||||||| |||| ||| ||||||||||||| |
|
|
| T |
26424 |
ttcctctgctcttggaagactatgc--atatatcttatccgcttctgcatgtctctgat-gagtgtaatacctct-taagctaaagctgtgattgaagac |
26519 |
T |
|
| Q |
199 |
tcgtgaggtattctatgtatgcacactcttgctatctctagagtgatattgtc-tgctactccttcttcttgaatatgtgttcatgatgacttgaggaag |
297 |
Q |
| |
|
|||||||||||||| ||||||||||| || || || ||||||| | || |||| ||||||||||||||||||||||| |||||||||||||||| |
|
|
| T |
26520 |
tcgtgaggtattct-tgtatgcacacatctgtta---ctttagtgatactatcaggctattccttcttcttgaatatgtgttcgtgatgacttgaggaag |
26615 |
T |
|
| Q |
298 |
tgtatctaaagtatctctttagattctgtgtgcttgctgtttct |
341 |
Q |
| |
|
||||||||| |||||||||||||||||||||||| ||| ||||| |
|
|
| T |
26616 |
tgtatctaaggtatctctttagattctgtgtgctagctatttct |
26659 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0226; HSP #3
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 1 - 51
Target Start/End: Original strand, 16845 - 16895
Alignment:
| Q |
1 |
aggaatttatttttcctctgctctatgtggtgaaggatgttgaaacatcca |
51 |
Q |
| |
|
|||||||| |||||||||||||||||||||||||||||| || |||||||| |
|
|
| T |
16845 |
aggaatttgtttttcctctgctctatgtggtgaaggatgatggaacatcca |
16895 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0226; HSP #4
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 1 - 51
Target Start/End: Original strand, 26239 - 26289
Alignment:
| Q |
1 |
aggaatttatttttcctctgctctatgtggtgaaggatgttgaaacatcca |
51 |
Q |
| |
|
|||||||| |||||||||||||||||||||||||||||| || |||||||| |
|
|
| T |
26239 |
aggaatttgtttttcctctgctctatgtggtgaaggatgatggaacatcca |
26289 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4 (Bit Score: 127; Significance: 2e-65; HSPs: 8)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 127; E-Value: 2e-65
Query Start/End: Original strand, 90 - 341
Target Start/End: Complemental strand, 16385153 - 16384907
Alignment:
| Q |
90 |
aatttatttttcctcttctcttgtgagactatgcttttttatcttatatgctgctgcatatctctgatcaagtgtaatacctctactagctgaagttgtg |
189 |
Q |
| |
|
|||||||||||||||| ||||||||||||||||| ||| |||| || | || || || |||||||||||||||||||||||||| |||||| | || | |
|
|
| T |
16385153 |
aatttatttttcctctgctcttgtgagactatgccttt--atctaattcgatgttgtatgtctctgatcaagtgtaatacctctaccagctgatgctgag |
16385056 |
T |
|
| Q |
190 |
attgaagactcgtgaggtattctatgtatgcacactcttgctatctctagagtgatattgtctgctactccttcttcttgaatatgtgttcatgatgact |
289 |
Q |
| |
|
||||||||||| ||||||||||||||||||||| ||||| ||||||||||||||||| ||||||||| ||||||||||||||||||||| |||| ||| |
|
|
| T |
16385055 |
attgaagactcatgaggtattctatgtatgcactctcttactatctctagagtgatactgtctgcta---cttcttcttgaatatgtgttcgtgataact |
16384959 |
T |
|
| Q |
290 |
tgaggaagtgtatctaaagtatctctttagattctgtgtgcttgctgtttct |
341 |
Q |
| |
|
||||||||||||| ||| |||||||||| |||| ||||||||| || ||||| |
|
|
| T |
16384958 |
tgaggaagtgtatataaggtatctctttggattttgtgtgctttctatttct |
16384907 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #2
Raw Score: 122; E-Value: 2e-62
Query Start/End: Original strand, 1 - 341
Target Start/End: Complemental strand, 10719010 - 10718671
Alignment:
| Q |
1 |
aggaatttatttttcctctgctcta-tgtggtgaaggatgttgaaacatccagtttgta-ggcaacttatgtttcctctctgcatcataggaatttattt |
98 |
Q |
| |
|
||||||||||||||||||||||||| ||| |||||||||||||||||||||| | || || || |||| ||||| ||||| ||||||||||||||| |
|
|
| T |
10719010 |
aggaatttatttttcctctgctctagtgttgtgaaggatgttgaaacatccattgagtgtgggaagttatttttccactctgtggcataggaatttattt |
10718911 |
T |
|
| Q |
99 |
ttcctcttctcttgtgagactatgcttttttatcttatatgctgctgcatatctctgatcaagtgtaatacctctactagctgaagttgtgattgaagac |
198 |
Q |
| |
|
||||||| |||||||||||||||| | ||||||| | || |||||||||||||| ||||||||||| ||||| ||| ||| |||||||||||| |
|
|
| T |
10718910 |
ttcctctgctcttgtgagactatgaaaat--atcttatccgttgatgcatatctctgat-aagtgtaatacgtctac-agccaaagctgtgattgaagat |
10718815 |
T |
|
| Q |
199 |
tc-gtgaggtattctatgtatgcacactcttgctatctctagagtgatattgtc-tgctactccttcttcttgaatatgtgttcatgatgacttgaggaa |
296 |
Q |
| |
|
| |||||||||||| ||||||||||| || ||| ||| ||||||| |||| |||||||| |||||||||||||||||||||||||||||||||||| |
|
|
| T |
10718814 |
tatgtgaggtattct-tgtatgcacacgtctgatatttctgtagtgataatgtcatgctactctttcttcttgaatatgtgttcatgatgacttgaggaa |
10718716 |
T |
|
| Q |
297 |
gtgtatctaaagtatctctttagattctgtgtgcttgctgtttct |
341 |
Q |
| |
|
|||||||||| ||||| |||||||||||||||||| ||||||||| |
|
|
| T |
10718715 |
gtgtatctaaggtatccctttagattctgtgtgctagctgtttct |
10718671 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #3
Raw Score: 122; E-Value: 2e-62
Query Start/End: Original strand, 1 - 341
Target Start/End: Complemental strand, 10932779 - 10932440
Alignment:
| Q |
1 |
aggaatttatttttcctctgctcta-tgtggtgaaggatgttgaaacatccagtttgta-ggcaacttatgtttcctctctgcatcataggaatttattt |
98 |
Q |
| |
|
||||||||||||||||||||||||| ||| |||||||||||||||||||||| | || || || |||| ||||| ||||| ||||||||||||||| |
|
|
| T |
10932779 |
aggaatttatttttcctctgctctagtgttgtgaaggatgttgaaacatccattgagtgtgggaagttatttttccactctgtggcataggaatttattt |
10932680 |
T |
|
| Q |
99 |
ttcctcttctcttgtgagactatgcttttttatcttatatgctgctgcatatctctgatcaagtgtaatacctctactagctgaagttgtgattgaagac |
198 |
Q |
| |
|
||||||| |||||||||||||||| | ||||||| | || |||||||||||||| ||||||||||| ||||| ||| ||| |||||||||||| |
|
|
| T |
10932679 |
ttcctctgctcttgtgagactatgaaaat--atcttatccgttgatgcatatctctgat-aagtgtaatacgtctac-agccaaagctgtgattgaagat |
10932584 |
T |
|
| Q |
199 |
tc-gtgaggtattctatgtatgcacactcttgctatctctagagtgatattgtc-tgctactccttcttcttgaatatgtgttcatgatgacttgaggaa |
296 |
Q |
| |
|
| |||||||||||| ||||||||||| || ||| ||| ||||||| |||| |||||||| |||||||||||||||||||||||||||||||||||| |
|
|
| T |
10932583 |
tatgtgaggtattct-tgtatgcacacgtctgatatttctgtagtgataatgtcatgctactctttcttcttgaatatgtgttcatgatgacttgaggaa |
10932485 |
T |
|
| Q |
297 |
gtgtatctaaagtatctctttagattctgtgtgcttgctgtttct |
341 |
Q |
| |
|
|||||||||| ||||| |||||||||||||||||| ||||||||| |
|
|
| T |
10932484 |
gtgtatctaaggtatccctttagattctgtgtgctagctgtttct |
10932440 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #4
Raw Score: 120; E-Value: 2e-61
Query Start/End: Original strand, 1 - 341
Target Start/End: Complemental strand, 10683783 - 10683444
Alignment:
| Q |
1 |
aggaatttatttttcctctgctcta-tgtggtgaaggatgttgaaacatccagtt--tgtaggcaacttatgtttcctctctgcatcataggaatttatt |
97 |
Q |
| |
|
||||||||||||||||||||||||| ||| | ||||||||||||||||||| | ||| || || |||| ||||| ||||| | |||||||||||||| |
|
|
| T |
10683783 |
aggaatttatttttcctctgctctagtgttataaaggatgttgaaacatccattgaatgtggg-aagttatttttccactctgtagcataggaatttatt |
10683685 |
T |
|
| Q |
98 |
tttcctcttctcttgtgagactatgcttttttatcttatatgctgctgcatatctctgatcaagtgtaatacctctactagctgaagttgtgattgaaga |
197 |
Q |
| |
|
|||| ||| |||||||||||||||| | ||||||| |||||||||| |||||||| ||||||||||||||||| |||||||| |||||||||||| |
|
|
| T |
10683684 |
tttcttctgctcttgtgagactatgaaaat--atcttatccgctgctgcatgtctctgat-aagtgtaatacctctac-agctgaagctgtgattgaaga |
10683589 |
T |
|
| Q |
198 |
ctc-gtgaggtattctatgtatgcacactcttgctatctctagagtgatattgtc-tgctactccttcttcttgaatatgtgttcatgatgacttgagga |
295 |
Q |
| |
|
| |||||||||||| ||||||||||| || ||| ||| | ||||||| || |||||||| ||||||||||||||||||||||||||||||||||| |
|
|
| T |
10683588 |
ttatgtgaggtattct-tgtatgcacacgtctgatatttctttaatgatattatcatgctactctttcttcttgaatatgtgttcatgatgacttgagga |
10683490 |
T |
|
| Q |
296 |
agtgtatctaaagtatctctttagattctgtgtgcttgctgtttct |
341 |
Q |
| |
|
||||||||||| ||||| |||||||||||||||||| | ||||||| |
|
|
| T |
10683489 |
agtgtatctaaggtatccctttagattctgtgtgctagttgtttct |
10683444 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #5
Raw Score: 120; E-Value: 2e-61
Query Start/End: Original strand, 1 - 341
Target Start/End: Complemental strand, 10897423 - 10897084
Alignment:
| Q |
1 |
aggaatttatttttcctctgctcta-tgtggtgaaggatgttgaaacatccagtt--tgtaggcaacttatgtttcctctctgcatcataggaatttatt |
97 |
Q |
| |
|
||||||||||||||||||||||||| ||| | ||||||||||||||||||| | ||| || || |||| ||||| ||||| | |||||||||||||| |
|
|
| T |
10897423 |
aggaatttatttttcctctgctctagtgttataaaggatgttgaaacatccattgaatgtggg-aagttatttttccactctgtagcataggaatttatt |
10897325 |
T |
|
| Q |
98 |
tttcctcttctcttgtgagactatgcttttttatcttatatgctgctgcatatctctgatcaagtgtaatacctctactagctgaagttgtgattgaaga |
197 |
Q |
| |
|
|||| ||| |||||||||||||||| | ||||||| |||||||||| |||||||| ||||||||||||||||| |||||||| |||||||||||| |
|
|
| T |
10897324 |
tttcttctgctcttgtgagactatgaaaat--atcttatccgctgctgcatgtctctgat-aagtgtaatacctctac-agctgaagctgtgattgaaga |
10897229 |
T |
|
| Q |
198 |
ctc-gtgaggtattctatgtatgcacactcttgctatctctagagtgatattgtc-tgctactccttcttcttgaatatgtgttcatgatgacttgagga |
295 |
Q |
| |
|
| |||||||||||| ||||||||||| || ||| ||| | ||||||| || |||||||| ||||||||||||||||||||||||||||||||||| |
|
|
| T |
10897228 |
ttatgtgaggtattct-tgtatgcacacgtctgatatttctttaatgatattatcatgctactctttcttcttgaatatgtgttcatgatgacttgagga |
10897130 |
T |
|
| Q |
296 |
agtgtatctaaagtatctctttagattctgtgtgcttgctgtttct |
341 |
Q |
| |
|
||||||||||| ||||| |||||||||||||||||| | ||||||| |
|
|
| T |
10897129 |
agtgtatctaaggtatccctttagattctgtgtgctagttgtttct |
10897084 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #6
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 201 - 322
Target Start/End: Complemental strand, 33744827 - 33744706
Alignment:
| Q |
201 |
gtgaggtattctatgtatgcacactcttgctatctctagagtgatattgtc-tgctactccttcttcttgaatatgtgttcatgatgacttgaggaagtg |
299 |
Q |
| |
|
|||||||||||| |||||||||||| || ||| || ||||||| |||| |||||||| |||||||||||||||||||| |||||||||||||||||| |
|
|
| T |
33744827 |
gtgaggtattct-tgtatgcacacttctgatattgctttagtgatactgtcatgctactcattcttcttgaatatgtgttcgtgatgacttgaggaagtg |
33744729 |
T |
|
| Q |
300 |
tatctaaagtatctctttagatt |
322 |
Q |
| |
|
||||||| |||| ||||||||| |
|
|
| T |
33744728 |
tatctaagatatccctttagatt |
33744706 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #7
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 13 - 42
Target Start/End: Complemental strand, 10683854 - 10683825
Alignment:
| Q |
13 |
ttcctctgctctatgtggtgaaggatgttg |
42 |
Q |
| |
|
|||||||||||||||||||||||||||||| |
|
|
| T |
10683854 |
ttcctctgctctatgtggtgaaggatgttg |
10683825 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #8
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 13 - 42
Target Start/End: Complemental strand, 10897494 - 10897465
Alignment:
| Q |
13 |
ttcctctgctctatgtggtgaaggatgttg |
42 |
Q |
| |
|
|||||||||||||||||||||||||||||| |
|
|
| T |
10897494 |
ttcctctgctctatgtggtgaaggatgttg |
10897465 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0103 (Bit Score: 99; Significance: 8e-49; HSPs: 3)
Name: scaffold0103
Description:
Target: scaffold0103; HSP #1
Raw Score: 99; E-Value: 8e-49
Query Start/End: Original strand, 177 - 341
Target Start/End: Original strand, 24659 - 24820
Alignment:
| Q |
177 |
agctgaagttgtgattgaagactcgtgaggtattctatgtatgcacactcttgctatctctagagtgatattgtctgctactccttcttcttgaatatgt |
276 |
Q |
| |
|
|||||||| |||||||||||| || ||||||||||||||||||||||||||||||||||| |||||||| |||||||| || |||| ||||||| || |
|
|
| T |
24659 |
agctgaagctgtgattgaagattctggaggtattctatgtatgcacactcttgctatctctggagtgatactgtctgctgctacttc---ttgaatacgt |
24755 |
T |
|
| Q |
277 |
gttcatgatgacttgaggaagtgtatctaaagtatctctttagattctgtgtgcttgctgtttct |
341 |
Q |
| |
|
|||| ||||||||||||||||||||||||| |||||||||||||||||||||||| ||| ||||| |
|
|
| T |
24756 |
gttcgtgatgacttgaggaagtgtatctaaggtatctctttagattctgtgtgctagctatttct |
24820 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0103; HSP #2
Raw Score: 91; E-Value: 5e-44
Query Start/End: Original strand, 1 - 182
Target Start/End: Complemental strand, 21108 - 20930
Alignment:
| Q |
1 |
aggaatttatttttcctctgctctatgtggtgaaggatgttgaaacatccagtttgtaggcaacttatgtttcctctctgcatcataggaatttattttt |
100 |
Q |
| |
|
||||||||||||||||| ||||||||| ||||||||||| ||||||||||||||||| ||||| |||||||||||| | ||| ||||||||||||| |
|
|
| T |
21108 |
aggaatttatttttcctttgctctatgatgtgaaggatgtctgaacatccagtttgtaggaaactt--gtttcctctctgtagcatgggaatttattttt |
21011 |
T |
|
| Q |
101 |
cctcttctcttgtgagactatgcttttttatcttatatgctgctgcatatctctgatcaagtgtaatacctctactagctga |
182 |
Q |
| |
|
||||| ||||||||||||||||| | ||||||| || |||||||||| ||| |||||||||||||||||||||| |||||| |
|
|
| T |
21010 |
cctctgctcttgtgagactatgc-tatttatctgatccgctgctgcatgtctttgatcaagtgtaatacctctaccagctga |
20930 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0103; HSP #3
Raw Score: 91; E-Value: 5e-44
Query Start/End: Original strand, 1 - 182
Target Start/End: Original strand, 22476 - 22654
Alignment:
| Q |
1 |
aggaatttatttttcctctgctctatgtggtgaaggatgttgaaacatccagtttgtaggcaacttatgtttcctctctgcatcataggaatttattttt |
100 |
Q |
| |
|
||||||||||||||||| ||||||||| ||||||||||| ||||||||||||||||| ||||| |||||||||||| | ||| ||||||||||||| |
|
|
| T |
22476 |
aggaatttatttttcctttgctctatgatgtgaaggatgtctgaacatccagtttgtaggaaactt--gtttcctctctgtagcatgggaatttattttt |
22573 |
T |
|
| Q |
101 |
cctcttctcttgtgagactatgcttttttatcttatatgctgctgcatatctctgatcaagtgtaatacctctactagctga |
182 |
Q |
| |
|
||||| ||||||||||||||||| | ||||||| || |||||||||| ||| |||||||||||||||||||||| |||||| |
|
|
| T |
22574 |
cctctgctcttgtgagactatgc-tatttatctgatccgctgctgcatgtctttgatcaagtgtaatacctctaccagctga |
22654 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0213 (Bit Score: 94; Significance: 8e-46; HSPs: 1)
Name: scaffold0213
Description:
Target: scaffold0213; HSP #1
Raw Score: 94; E-Value: 8e-46
Query Start/End: Original strand, 24 - 341
Target Start/End: Original strand, 7406 - 7721
Alignment:
| Q |
24 |
tatgtggtgaaggatgttgaaacatccagtttgtaggc-aacttatgtttcctctctgcatcataggaatttatttttcctcttctcttgtgagactatg |
122 |
Q |
| |
|
||||||||||||||||||| |||||||| | |||||| ||||||||||||||||||| | |||||||||||||||||||| | || ||||||||||||| |
|
|
| T |
7406 |
tatgtggtgaaggatgttggaacatccaatgtgtaggggaacttatgtttcctctctgtagcataggaatttatttttcctttgcttttgtgagactatg |
7505 |
T |
|
| Q |
123 |
cttttttatcttatatgctgctgcatatctctgatcaagtgtaatacctctactagctgaagttgtgattgaagactc-gtgaggtattctatgtatgca |
221 |
Q |
| |
|
|| | || ||| ||||||||| ||||| || ||||||||||||||||| | |||||| ||| |||||||| | |||||||||||| |||||||| |
|
|
| T |
7506 |
ctaat--attgtatcctctgctgcatgtctctaat-aagtgtaatacctctacaa-ctgaagctgtaattgaagattatgtgaggtattct-tgtatgca |
7600 |
T |
|
| Q |
222 |
cactcttgctatctctagagtgatattgtc-tgctactccttcttcttgaatatgtgttcatgatgacttgaggaagtgtatctaaagtatctctttaga |
320 |
Q |
| |
|
|||| ||| ||||||| ||||||| | || || ||||||| ||||| ||||| ||||| ||||||| ||||||||||||||||| ||||| ||||| | |
|
|
| T |
7601 |
cacttttgatatctctttagtgatactatcatgttactcctctttcttaaatatttgttcgtgatgacatgaggaagtgtatctaaggtatccctttata |
7700 |
T |
|
| Q |
321 |
ttctgtgtgcttgctgtttct |
341 |
Q |
| |
|
|| |||||||| | ||||||| |
|
|
| T |
7701 |
ttttgtgtgctagttgtttct |
7721 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0020 (Bit Score: 90; Significance: 2e-43; HSPs: 1)
Name: scaffold0020
Description:
Target: scaffold0020; HSP #1
Raw Score: 90; E-Value: 2e-43
Query Start/End: Original strand, 1 - 182
Target Start/End: Original strand, 12002 - 12182
Alignment:
| Q |
1 |
aggaatttatttttcctctgctctatgtggtgaaggatgttgaaacatccagtttgtaggcaacttatgtttcctctctgcatcataggaatttattttt |
100 |
Q |
| |
|
||||||||| |||||||||||||||||| ||||||||||| |||||| ||||||||| | |||| |||||||||||||| | ||||||||||||||||| |
|
|
| T |
12002 |
aggaatttagttttcctctgctctatgttgtgaaggatgtctaaacattcagtttgtaaggaactcatgtttcctctctgtagcataggaatttattttt |
12101 |
T |
|
| Q |
101 |
cctcttctcttgtgagactatgcttttttatcttatatgctgctgcatatctctgatcaagtgtaatacctctactagctga |
182 |
Q |
| |
|
||| | ||||||||||||||||| | ||||||| | ||||||| || |||| ||||||||||||||||||||| |||||| |
|
|
| T |
12102 |
cctttgctcttgtgagactatgc-tatttatctgacccgctgctggatgtctcagatcaagtgtaatacctctaccagctga |
12182 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0008 (Bit Score: 51; Significance: 4e-20; HSPs: 1)
Name: scaffold0008
Description:
Target: scaffold0008; HSP #1
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 255 - 341
Target Start/End: Complemental strand, 36847 - 36761
Alignment:
| Q |
255 |
tactccttcttcttgaatatgtgttcatgatgacttgaggaagtgtatctaaagtatctctttagattctgtgtgcttgctgtttct |
341 |
Q |
| |
|
|||| ||||||||||||||||||| | ||||||||||||| ||||||||||| ||||||||| ||||| |||||||| | ||||||| |
|
|
| T |
36847 |
tactacttcttcttgaatatgtgtccgtgatgacttgaggcagtgtatctaaggtatctcttcagattgtgtgtgctagttgtttct |
36761 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
© Oklahoma State University