View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF10188_low_8 (Length: 430)
Name: NF10188_low_8
Description: NF10188
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF10188_low_8 |
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Alignment Details
Target: chr7 (Bit Score: 369; Significance: 0; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 369; E-Value: 0
Query Start/End: Original strand, 6 - 417
Target Start/End: Original strand, 36345448 - 36345864
Alignment:
| Q |
6 |
agaagcaaaggcagaagctgcagcaggaggtggtgatggaagtaaatgaaaaaggtatcagaataaagaa-----tatgacgcttcaaattgaaggcgtg |
100 |
Q |
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| T |
36345448 |
agaaccaaaggcagaagctgcagcaggaggtggtgatggaagtaaatgaaaaaggtatcagaatgaagaacctactatgacgcttcaaattgaaggcgtg |
36345547 |
T |
|
| Q |
101 |
tctggtgtttgacaaagacacatatgattatggttacatttaatttatctacattcttaaattattacaggtgtcaacgttaagtgacgtgtccgatgta |
200 |
Q |
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| T |
36345548 |
ttcggtgtttgacaaagacacatatggttatggttacatttaatttatctacattcttaaattattacaggtgtcaacattaagtgacgtgtccgatgta |
36345647 |
T |
|
| Q |
201 |
tgtttctgggttattattccatattagatgcatattattctattctaacacaaacattatttttaagttagtaagtatataacttgatgtatgctttgtt |
300 |
Q |
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| T |
36345648 |
tgtttctgggttattattccatattagatgcatattattctattctaacacaaacattatttttaagttagtaagtatataacttgatgtatgctttgtt |
36345747 |
T |
|
| Q |
301 |
taatttcgctatagctagtgaatgctatgcgatacaagaaagtttagacaacttttaattaatgaatgtatagagtagcaatgtgttagttctagaacct |
400 |
Q |
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||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
36345748 |
taatttcgctatagctagtgaatgctatgtgatacaagaaagtttagacaacttttaattaatgaatgtatagagtagcaatgtgttagttctagaacct |
36345847 |
T |
|
| Q |
401 |
aagctactattgatgtc |
417 |
Q |
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| T |
36345848 |
aagctactattgatgtc |
36345864 |
T |
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