View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF10189_high_3 (Length: 561)

Name: NF10189_high_3
Description: NF10189
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF10189_high_3
NF10189_high_3
[»] chr7 (21 HSPs)
chr7 (1-543)||(511536-512071)
chr7 (341-416)||(6667790-6667865)
chr7 (341-416)||(17508855-17508930)
chr7 (341-416)||(17544284-17544359)
chr7 (341-416)||(21991057-21991132)
chr7 (341-416)||(36253325-36253400)
chr7 (341-416)||(43847368-43847443)
chr7 (341-416)||(46025706-46025781)
chr7 (342-416)||(37593478-37593552)
chr7 (342-416)||(39707663-39707737)
chr7 (345-418)||(10574758-10574831)
chr7 (344-416)||(24319877-24319949)
chr7 (344-416)||(31254785-31254857)
chr7 (342-405)||(21603864-21603927)
chr7 (341-416)||(41288351-41288426)
chr7 (354-416)||(36719224-36719286)
chr7 (342-416)||(39532627-39532701)
chr7 (342-416)||(39989841-39989915)
chr7 (343-416)||(25112882-25112955)
chr7 (344-416)||(11833413-11833485)
chr7 (388-416)||(43398742-43398770)
[»] chr5 (18 HSPs)
chr5 (345-416)||(6012716-6012787)
chr5 (341-402)||(34866820-34866881)
chr5 (341-416)||(11734496-11734571)
chr5 (341-416)||(42781396-42781471)
chr5 (344-416)||(177758-177830)
chr5 (341-416)||(17095892-17095967)
chr5 (341-416)||(17331723-17331798)
chr5 (341-416)||(39179496-39179571)
chr5 (342-408)||(13161748-13161814)
chr5 (342-416)||(34431459-34431533)
chr5 (383-416)||(11647579-11647612)
chr5 (342-403)||(42505065-42505126)
chr5 (341-416)||(17732038-17732113)
chr5 (341-416)||(23881767-23881842)
chr5 (341-416)||(26294005-26294080)
chr5 (342-416)||(7771473-7771547)
chr5 (344-416)||(6281439-6281511)
chr5 (343-403)||(15710931-15710991)
[»] chr3 (26 HSPs)
chr3 (341-416)||(14585857-14585932)
chr3 (342-416)||(53155090-53155164)
chr3 (341-416)||(13701661-13701736)
chr3 (341-416)||(19645585-19645660)
chr3 (341-416)||(30155949-30156024)
chr3 (344-416)||(2192473-2192545)
chr3 (341-416)||(33637789-33637864)
chr3 (341-416)||(45047892-45047967)
chr3 (341-416)||(48652108-48652183)
chr3 (341-416)||(55455257-55455332)
chr3 (345-407)||(41598139-41598201)
chr3 (342-416)||(41867993-41868067)
chr3 (342-416)||(55090359-55090433)
chr3 (341-402)||(4019986-4020047)
chr3 (344-416)||(3457317-3457389)
chr3 (341-417)||(11819478-11819554)
chr3 (344-416)||(50981128-50981200)
chr3 (344-416)||(51084262-51084334)
chr3 (341-416)||(24483355-24483430)
chr3 (341-416)||(31270704-31270779)
chr3 (345-416)||(32080426-32080497)
chr3 (342-416)||(49627764-49627838)
chr3 (388-416)||(550575-550603)
chr3 (388-416)||(2522785-2522813)
chr3 (341-416)||(19148370-19148446)
chr3 (344-416)||(31462417-31462489)
[»] chr1 (20 HSPs)
chr1 (342-416)||(32879088-32879162)
chr1 (344-416)||(25032757-25032829)
chr1 (341-417)||(4882028-4882104)
chr1 (341-416)||(15790927-15791002)
chr1 (342-403)||(22031768-22031829)
chr1 (344-416)||(13488190-13488262)
chr1 (344-403)||(26771493-26771552)
chr1 (341-416)||(28677790-28677865)
chr1 (341-416)||(29205663-29205738)
chr1 (341-416)||(32784474-32784549)
chr1 (341-416)||(44517543-44517618)
chr1 (341-415)||(1141074-1141148)
chr1 (387-417)||(8737911-8737941)
chr1 (342-416)||(10188542-10188616)
chr1 (342-416)||(37822015-37822089)
chr1 (342-416)||(27535092-27535162)
chr1 (383-416)||(29938595-29938628)
chr1 (341-416)||(7995230-7995303)
chr1 (344-416)||(12537914-12537986)
chr1 (388-416)||(25689551-25689579)
[»] chr6 (16 HSPs)
chr6 (341-416)||(30813452-30813527)
chr6 (341-416)||(31705560-31705635)
chr6 (343-417)||(5527301-5527375)
chr6 (341-416)||(6295900-6295975)
chr6 (341-416)||(6302710-6302785)
chr6 (341-416)||(21507505-21507580)
chr6 (341-416)||(23654644-23654719)
chr6 (342-416)||(12653970-12654044)
chr6 (341-416)||(2304489-2304564)
chr6 (341-416)||(5146321-5146396)
chr6 (341-416)||(12481030-12481105)
chr6 (341-416)||(35219564-35219639)
chr6 (366-412)||(16328766-16328812)
chr6 (342-416)||(19402504-19402578)
chr6 (346-415)||(14731001-14731070)
chr6 (341-405)||(21942092-21942156)
[»] chr4 (31 HSPs)
chr4 (341-416)||(6912075-6912150)
chr4 (341-416)||(18502493-18502568)
chr4 (369-415)||(31444766-31444812)
chr4 (342-416)||(56062369-56062443)
chr4 (341-416)||(20887408-20887483)
chr4 (341-416)||(24100528-24100603)
chr4 (341-416)||(27395211-27395286)
chr4 (341-416)||(42197948-42198023)
chr4 (341-416)||(56236482-56236557)
chr4 (342-416)||(36124009-36124083)
chr4 (342-416)||(41837709-41837783)
chr4 (342-416)||(45350722-45350796)
chr4 (342-416)||(45360201-45360275)
chr4 (344-416)||(626213-626285)
chr4 (344-416)||(28837450-28837522)
chr4 (341-416)||(3159357-3159432)
chr4 (341-416)||(6882339-6882414)
chr4 (341-416)||(13965938-13966013)
chr4 (341-416)||(38943808-38943883)
chr4 (341-416)||(43244032-43244107)
chr4 (342-416)||(393926-394000)
chr4 (342-416)||(8517111-8517185)
chr4 (342-416)||(11209965-11210039)
chr4 (342-416)||(37431551-37431625)
chr4 (342-400)||(55600198-55600256)
chr4 (268-306)||(56062405-56062443)
chr4 (341-402)||(7242451-7242512)
chr4 (345-406)||(22121837-22121898)
chr4 (341-394)||(30416292-30416345)
chr4 (344-416)||(7060709-7060781)
chr4 (344-416)||(50801597-50801669)
[»] chr2 (27 HSPs)
chr2 (341-416)||(11798189-11798264)
chr2 (342-416)||(18089064-18089138)
chr2 (341-417)||(19904883-19904959)
chr2 (344-416)||(34962649-34962721)
chr2 (341-416)||(9689636-9689711)
chr2 (341-416)||(25068236-25068311)
chr2 (341-416)||(27096084-27096159)
chr2 (341-416)||(38384117-38384192)
chr2 (341-416)||(43696263-43696338)
chr2 (342-416)||(13548571-13548645)
chr2 (341-403)||(15920261-15920323)
chr2 (342-416)||(20560785-20560859)
chr2 (342-416)||(29543188-29543262)
chr2 (342-416)||(33012443-33012517)
chr2 (341-402)||(11550331-11550392)
chr2 (341-421)||(7581758-7581838)
chr2 (344-416)||(12705081-12705153)
chr2 (341-416)||(4703526-4703601)
chr2 (341-416)||(4739724-4739799)
chr2 (341-416)||(11937517-11937592)
chr2 (341-416)||(12890768-12890843)
chr2 (341-416)||(13878660-13878735)
chr2 (341-416)||(14018785-14018860)
chr2 (342-416)||(13740306-13740380)
chr2 (342-416)||(28230749-28230823)
chr2 (342-416)||(35333900-35333974)
chr2 (383-416)||(20607147-20607180)
[»] scaffold0007 (1 HSPs)
scaffold0007 (344-409)||(201731-201796)
[»] chr8 (21 HSPs)
chr8 (341-417)||(24790829-24790905)
chr8 (341-416)||(2234129-2234204)
chr8 (345-416)||(28296778-28296849)
chr8 (344-416)||(2968910-2968982)
chr8 (344-416)||(13575871-13575943)
chr8 (341-416)||(9501963-9502038)
chr8 (341-416)||(11162281-11162356)
chr8 (344-403)||(13977797-13977856)
chr8 (342-416)||(15286692-15286767)
chr8 (342-416)||(15467061-15467136)
chr8 (341-416)||(31202843-31202918)
chr8 (341-416)||(39067349-39067424)
chr8 (344-403)||(41362141-41362200)
chr8 (342-416)||(37613031-37613105)
chr8 (274-303)||(14918354-14918383)
chr8 (341-402)||(41996931-41996992)
chr8 (342-402)||(5990001-5990061)
chr8 (344-400)||(9799679-9799735)
chr8 (344-416)||(9802051-9802123)
chr8 (341-401)||(13570426-13570486)
chr8 (360-416)||(31407429-31407485)
[»] scaffold0056 (1 HSPs)
scaffold0056 (341-416)||(74559-74634)
[»] scaffold0321 (1 HSPs)
scaffold0321 (341-416)||(6780-6856)
[»] scaffold0536 (1 HSPs)
scaffold0536 (341-416)||(3290-3365)
[»] scaffold0155 (1 HSPs)
scaffold0155 (341-416)||(35470-35545)
[»] scaffold0090 (1 HSPs)
scaffold0090 (342-416)||(11220-11294)
[»] scaffold0001 (1 HSPs)
scaffold0001 (342-416)||(403900-403974)


Alignment Details
Target: chr7 (Bit Score: 367; Significance: 0; HSPs: 21)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 367; E-Value: 0
Query Start/End: Original strand, 1 - 543
Target Start/End: Complemental strand, 512071 - 511536
Alignment:
Q  1 tgagataatttagaaatccctgccaaattagataaacatgttcatagatcaatagtaatggataaacatgtttatcgtgatatacatgtgaaacattgat 100  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  512071 tgagataatttagaaatccctgccaaattagataaacatgttcatagatcaatagtaatggataaacatgtttatcgtgatatacatgtgaaacattgat 511972  T
Q  101 gacatgaaccgttacagacatgttgatgcataattacatactatcgactaatcctaatatcagattttagaagcatcttagaacacgcgttggcacttgg 200  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||| |||  |||||||||||||    
T  511971 gacatgaaccgttacagacatgttgatgcataattacatactatcgactaatgctaatatcagattttagaagcatcttagtaca--cgttggcacttgg 511874  T
Q  201 atcttaggaaattaacatgtgaggcaagtaggaagcacatgatagagtattcaaagac---nnnnnnnnnacaaagataaataatattcattcgtttaaa 297  Q
    ||| |||||||||||      ||||||||||||||||||||| |||||||||||||||            |||||||||||| |||||||||| ||||||    
T  511873 atcgtaggaaattaa------aggcaagtaggaagcacatgagagagtattcaaagacattttctttttaacaaagataaatgatattcattcctttaaa 511780  T
Q  298 ttgatataggaagcacatgagaatatttaaagacannnnnnnngacaaaaataaatgatactcattcgtttaaattgatgtagtgcatcaatacaataca 397  Q
    |||||||||||||||||||||||||||||||||||        |||||||||||||||||||||||||||||||||||| |||| |||||||||||||||    
T  511779 ttgatataggaagcacatgagaatatttaaagacattttttttgacaaaaataaatgatactcattcgtttaaattgatatagttcatcaatacaataca 511680  T
Q  398 aattcaaagtcgctaaaaaatgattagcttagaaacaaactcacaacattctttttaactgcgtaaaacagaaannnnnnnnnnnnttacaaatatgact 497  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||             ||||||||||||||    
T  511679 aattcaaagtcgctaaaaaatgattagcttagaaacaaactcacaacattctttttaactgcgtaaaacagaa--tatatatatatttacaaatatgact 511582  T
Q  498 attgagaatatctaaagacatgttaacacatgaaacatgtagacat 543  Q
    |||||||||||||||||||| |||||||||||||||||||||||||    
T  511581 attgagaatatctaaagacaggttaacacatgaaacatgtagacat 511536  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 341 - 416
Target Start/End: Complemental strand, 6667865 - 6667790
Alignment:
Q  341 gacaaaaataaatgatactcattcgtttaaattgatgtagtgcatcaatacaatacaaattcaaagtcgctaaaaa 416  Q
    |||||||||||| |||| |||||| || ||||||||  ||  |||| |||||||||||||||||| ||||||||||    
T  6667865 gacaaaaataaacgatattcattcattcaaattgatagagcacatcgatacaatacaaattcaaattcgctaaaaa 6667790  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 341 - 416
Target Start/End: Original strand, 17508855 - 17508930
Alignment:
Q  341 gacaaaaataaatgatactcattcgtttaaattgatgtagtgcatcaatacaatacaaattcaaagtcgctaaaaa 416  Q
    ||||||| ||||||||| |||||| |||||||||||  ||| |||| |||||||||||||  ||| ||||||||||    
T  17508855 gacaaaagtaaatgatattcattcttttaaattgatagagtacatcgatacaatacaaatctaaattcgctaaaaa 17508930  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 341 - 416
Target Start/End: Complemental strand, 17544359 - 17544284
Alignment:
Q  341 gacaaaaataaatgatactcattcgtttaaattgatgtagtgcatcaatacaatacaaattcaaagtcgctaaaaa 416  Q
    ||||||| ||||||||| |||||| |||||||||||  ||| |||| |||||||||||||  ||| ||||||||||    
T  17544359 gacaaaagtaaatgatattcattcttttaaattgatagagtacatcgatacaatacaaatctaaattcgctaaaaa 17544284  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 341 - 416
Target Start/End: Complemental strand, 21991132 - 21991057
Alignment:
Q  341 gacaaaaataaatgatactcattcgtttaaattgatgtagtgcatcaatacaatacaaattcaaagtcgctaaaaa 416  Q
    |||||||||||| |||| |||||| || ||||||||  ||| |||| ||||||||||||| |||| ||||||||||    
T  21991132 gacaaaaataaacgatattcattcattcaaattgatagagtacatcgatacaatacaaatccaaattcgctaaaaa 21991057  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 341 - 416
Target Start/End: Complemental strand, 36253400 - 36253325
Alignment:
Q  341 gacaaaaataaatgatactcattcgtttaaattgatgtagtgcatcaatacaatacaaattcaaagtcgctaaaaa 416  Q
    |||||||||||| ||||||||||| || ||||||||  ||| |||| ||||||||||||| |||| | ||||||||    
T  36253400 gacaaaaataaacgatactcattcattcaaattgatagagtacatcgatacaatacaaatccaaatttgctaaaaa 36253325  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 341 - 416
Target Start/End: Complemental strand, 43847443 - 43847368
Alignment:
Q  341 gacaaaaataaatgatactcattcgtttaaattgatgtagtgcatcaatacaatacaaattcaaagtcgctaaaaa 416  Q
    ||||||||||||||||| |||||| || ||||||||  |||  ||| ||||||||||||| |||| ||||||||||    
T  43847443 gacaaaaataaatgatattcattcattcaaattgatagagtatatcgatacaatacaaatccaaattcgctaaaaa 43847368  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 341 - 416
Target Start/End: Original strand, 46025706 - 46025781
Alignment:
Q  341 gacaaaaataaatgatactcattcgtttaaattgatgtagtgcatcaatacaatacaaattcaaagtcgctaaaaa 416  Q
    |||||||||||| |||| |||||| || ||||||||  ||| |||| ||||||||||||| |||| ||||||||||    
T  46025706 gacaaaaataaacgatattcattcattcaaattgataaagtacatcgatacaatacaaatccaaattcgctaaaaa 46025781  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 342 - 416
Target Start/End: Complemental strand, 37593552 - 37593478
Alignment:
Q  342 acaaaaataaatgatactcattcgtttaaattgatgtagtgcatcaatacaatacaaattcaaagtcgctaaaaa 416  Q
    ||||||||||| |||| |||||| || ||||||||| ||| |||| |||||||||||||  ||| ||||||||||    
T  37593552 acaaaaataaacgatattcattcattcaaattgatggagtacatcgatacaatacaaatctaaattcgctaaaaa 37593478  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 342 - 416
Target Start/End: Complemental strand, 39707737 - 39707663
Alignment:
Q  342 acaaaaataaatgatactcattcgtttaaattgatgtagtgcatcaatacaatacaaattcaaagtcgctaaaaa 416  Q
    ||||||||||| |||| |||||| || ||||||||  |||| |||||||||||||| ||  ||||||||||||||    
T  39707737 acaaaaataaacgatattcattcattcaaattgatagagtggatcaatacaatacatatcgaaagtcgctaaaaa 39707663  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 345 - 418
Target Start/End: Complemental strand, 10574831 - 10574758
Alignment:
Q  345 aaaataaatgatactcattcgtttaaattgatgtagtgcatcaatacaatacaaattcaaagtcgctaaaaaat 418  Q
    ||||||||||||| |||||| || ||||||||  ||| ||||||||||||| ||||  ||| ||||||||||||    
T  10574831 aaaataaatgatattcattcattcaaattgatagagtacatcaatacaatataaatctaaattcgctaaaaaat 10574758  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 344 - 416
Target Start/End: Original strand, 24319877 - 24319949
Alignment:
Q  344 aaaaataaatgatactcattcgtttaaattgatgtagtgcatcaatacaatacaaattcaaagtcgctaaaaa 416  Q
    ||||||||| |||| |||||| |||||||||||  ||| |||| |||||||||||||  ||| ||||||||||    
T  24319877 aaaaataaacgatattcattcatttaaattgatagagtacatcgatacaatacaaatctaaattcgctaaaaa 24319949  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 344 - 416
Target Start/End: Original strand, 31254785 - 31254857
Alignment:
Q  344 aaaaataaatgatactcattcgtttaaattgatgtagtgcatcaatacaatacaaattcaaagtcgctaaaaa 416  Q
    ||||||||| |||| |||||| || ||||||||  | | |||| |||||||||||||||||||| ||||||||    
T  31254785 aaaaataaaggatattcattcattcaaattgatagattacatcgatacaatacaaattcaaagttgctaaaaa 31254857  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 342 - 405
Target Start/End: Complemental strand, 21603927 - 21603864
Alignment:
Q  342 acaaaaataaatgatactcattcgtttaaattgatgtagtgcatcaatacaatacaaattcaaa 405  Q
    |||||||| || |||| |||||| || ||||||||  ||| |||||||||||||||||||||||    
T  21603927 acaaaaattaacgatattcattcattcaaattgatagagtacatcaatacaatacaaattcaaa 21603864  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 341 - 416
Target Start/End: Complemental strand, 41288426 - 41288351
Alignment:
Q  341 gacaaaaataaatgatactcattcgtttaaattgatgtagtgcatcaatacaatacaaattcaaagtcgctaaaaa 416  Q
    |||||||||||| |||| || ||| || ||||||||  ||| |||| |||||||||||||||||| || |||||||    
T  41288426 gacaaaaataaacgatattctttcattcaaattgatagagtacatcgatacaatacaaattcaaattcactaaaaa 41288351  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 354 - 416
Target Start/End: Original strand, 36719224 - 36719286
Alignment:
Q  354 gatactcattcgtttaaattgatgtagtgcatcaatacaatacaaattcaaagtcgctaaaaa 416  Q
    |||| |||||| || ||||||||  |||||||| ||||||||||||| |||| ||||||||||    
T  36719224 gatattcattcattcaaattgatagagtgcatcgatacaatacaaatccaaattcgctaaaaa 36719286  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 342 - 416
Target Start/End: Original strand, 39532627 - 39532701
Alignment:
Q  342 acaaaaataaatgatactcattcgtttaaattgatgtagtgcatcaatacaatacaaattcaaagtcgctaaaaa 416  Q
    ||||||||||| |||| | |||| || ||||||||  ||| || | |||||||||||||||||| ||||||||||    
T  39532627 acaaaaataaacgatattaattcattcaaattgatagagtacaccgatacaatacaaattcaaattcgctaaaaa 39532701  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 342 - 416
Target Start/End: Original strand, 39989841 - 39989915
Alignment:
Q  342 acaaaaataaatgatactcattcgtttaaattgatgtagtgcatcaatacaatacaaattcaaagtcgctaaaaa 416  Q
    |||||||||||||||| |||| | || ||||||||  ||| | ||||||||||| ||||| ||||| ||||||||    
T  39989841 acaaaaataaatgatattcatgcattcaaattgatagagtacgtcaatacaatataaatttaaagttgctaaaaa 39989915  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 343 - 416
Target Start/End: Complemental strand, 25112955 - 25112882
Alignment:
Q  343 caaaaataaatgatactcattcgtttaaattgatgtagtgcatcaatacaatacaaattcaaagtcgctaaaaa 416  Q
    |||||||||| |||| |||||| || ||| ||||  ||| |||| |||||||| ||| ||||||||||||||||    
T  25112955 caaaaataaacgatagtcattcattcaaaatgatagagtacatcgatacaatataaaatcaaagtcgctaaaaa 25112882  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 344 - 416
Target Start/End: Complemental strand, 11833485 - 11833413
Alignment:
Q  344 aaaaataaatgatactcattcgtttaaattgatgtagtgcatcaatacaatacaaattcaaagtcgctaaaaa 416  Q
    ||||||||| |||| |||||| || ||||||||  ||| |||| |||||||||||||||  | ||||||||||    
T  11833485 aaaaataaacgatattcattcattcaaattgatagagtacatcgatacaatacaaattcgcattcgctaaaaa 11833413  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 388 - 416
Target Start/End: Complemental strand, 43398770 - 43398742
Alignment:
Q  388 atacaatacaaattcaaagtcgctaaaaa 416  Q
    |||||||||||||||||||||||||||||    
T  43398770 atacaatacaaattcaaagtcgctaaaaa 43398742  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 44; Significance: 9e-16; HSPs: 18)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 44; E-Value: 9e-16
Query Start/End: Original strand, 345 - 416
Target Start/End: Original strand, 6012716 - 6012787
Alignment:
Q  345 aaaataaatgatactcattcgtttaaattgatgtagtgcatcaatacaatacaaattcaaagtcgctaaaaa 416  Q
    ||||||||||||| |||||  |||||||||||  ||| ||| ||||||||||||||||||||||||||||||    
T  6012716 aaaataaatgataatcattaatttaaattgatagagtacattaatacaatacaaattcaaagtcgctaaaaa 6012787  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 341 - 402
Target Start/End: Complemental strand, 34866881 - 34866820
Alignment:
Q  341 gacaaaaataaatgatactcattcgtttaaattgatgtagtgcatcaatacaatacaaattc 402  Q
    ||||||||||||||||| |||||| || |||||||| ||||||||||||||||| |||||||    
T  34866881 gacaaaaataaatgatattcattcattcaaattgatatagtgcatcaatacaatgcaaattc 34866820  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 341 - 416
Target Start/End: Original strand, 11734496 - 11734571
Alignment:
Q  341 gacaaaaataaatgatactcattcgtttaaattgatgtagtgcatcaatacaatacaaattcaaagtcgctaaaaa 416  Q
    |||||||||||| |||| |||||| || ||||||||  ||| |||| |||||||||||||||||| ||||||||||    
T  11734496 gacaaaaataaacgatattcattcattcaaattgataaagtacatcgatacaatacaaattcaaattcgctaaaaa 11734571  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 341 - 416
Target Start/End: Complemental strand, 42781471 - 42781396
Alignment:
Q  341 gacaaaaataaatgatactcattcgtttaaattgatgtagtgcatcaatacaatacaaattcaaagtcgctaaaaa 416  Q
    |||||||||||| |||| | |||  || ||||||||  |||||||| |||||||||||||||||||||||||||||    
T  42781471 gacaaaaataaacgatatttatttattcaaattgatagagtgcatcgatacaatacaaattcaaagtcgctaaaaa 42781396  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 344 - 416
Target Start/End: Original strand, 177758 - 177830
Alignment:
Q  344 aaaaataaatgatactcattcgtttaaattgatgtagtgcatcaatacaatacaaattcaaagtcgctaaaaa 416  Q
    ||||| |||||||| |||||| || ||||||||| ||| |||| ||||||||||||| |||| ||||||||||    
T  177758 aaaaaaaaatgatattcattcattcaaattgatggagtacatcgatacaatacaaatccaaattcgctaaaaa 177830  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 341 - 416
Target Start/End: Original strand, 17095892 - 17095967
Alignment:
Q  341 gacaaaaataaatgatactcattcgtttaaattgatgtagtgcatcaatacaatacaaattcaaagtcgctaaaaa 416  Q
    |||||||||||| || | |||||| || ||||||||  ||| |||| |||||||||||||||||| ||||||||||    
T  17095892 gacaaaaataaacgacattcattcattcaaattgatagagtacatcgatacaatacaaattcaaattcgctaaaaa 17095967  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 341 - 416
Target Start/End: Complemental strand, 17331798 - 17331723
Alignment:
Q  341 gacaaaaataaatgatactcattcgtttaaattgatgtagtgcatcaatacaatacaaattcaaagtcgctaaaaa 416  Q
    |||||||||||| |||| |||||| || ||||||||  ||| |||| ||||||||||||| |||| ||||||||||    
T  17331798 gacaaaaataaacgatattcattcattcaaattgatagagtacatcgatacaatacaaatccaaattcgctaaaaa 17331723  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 341 - 416
Target Start/End: Original strand, 39179496 - 39179571
Alignment:
Q  341 gacaaaaataaatgatactcattcgtttaaattgatgtagtgcatcaatacaatacaaattcaaagtcgctaaaaa 416  Q
    |||||||||||| |||| |||||| || ||||||||  ||| |||| ||||||||||||| |||| ||||||||||    
T  39179496 gacaaaaataaacgatattcattcattcaaattgataaagtacatcgatacaatacaaatccaaattcgctaaaaa 39179571  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 342 - 408
Target Start/End: Complemental strand, 13161814 - 13161748
Alignment:
Q  342 acaaaaataaatgatactcattcgtttaaattgatgtagtgcatcaatacaatacaaattcaaagtc 408  Q
    |||||||||||||||  ||||||  | ||||||||  ||| ||||||||||||||||||||||||||    
T  13161814 acaaaaataaatgattttcattcactaaaattgatagagtacatcaatacaatacaaattcaaagtc 13161748  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 342 - 416
Target Start/End: Complemental strand, 34431533 - 34431459
Alignment:
Q  342 acaaaaataaatgatactcattcgtttaaattgatgtagtgcatcaatacaatacaaattcaaagtcgctaaaaa 416  Q
    ||||||||||| |||| |||||| || ||||||||  ||| |||| ||||||||||||| |||| ||||||||||    
T  34431533 acaaaaataaacgatattcattcattcaaattgatagagtacatcgatacaatacaaatccaaattcgctaaaaa 34431459  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 383 - 416
Target Start/End: Complemental strand, 11647612 - 11647579
Alignment:
Q  383 catcaatacaatacaaattcaaagtcgctaaaaa 416  Q
    ||||||||||||||||||||||||||||||||||    
T  11647612 catcaatacaatacaaattcaaagtcgctaaaaa 11647579  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 342 - 403
Target Start/End: Original strand, 42505065 - 42505126
Alignment:
Q  342 acaaaaataaatgatactcattcgtttaaattgatgtagtgcatcaatacaatacaaattca 403  Q
    ||||||||||| |||| |||||| || ||||||||  ||| |||||||||||||||||||||    
T  42505065 acaaaaataaacgatattcattcattcaaattgatagagtacatcaatacaatacaaattca 42505126  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 341 - 416
Target Start/End: Original strand, 17732038 - 17732113
Alignment:
Q  341 gacaaaaataaatgatactcattcgtttaaattgatgtagtgcatcaatacaatacaaattcaaagtcgctaaaaa 416  Q
    ||||||||||||||||| ||| || || ||||||||  ||| |||| ||||||||||||| |||| || |||||||    
T  17732038 gacaaaaataaatgatattcactcattcaaattgatagagtacatcgatacaatacaaatccaaattcactaaaaa 17732113  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 341 - 416
Target Start/End: Original strand, 23881767 - 23881842
Alignment:
Q  341 gacaaaaataaatgatactcattcgtttaaattgatgtagtgcatcaatacaatacaaattcaaagtcgctaaaaa 416  Q
    |||||||||||| |||| |||||| || ||||||||  ||| |||| ||||||||||||| |||| |||| |||||    
T  23881767 gacaaaaataaacgatattcattcattcaaattgatagagtacatcgatacaatacaaatccaaattcgcaaaaaa 23881842  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 341 - 416
Target Start/End: Complemental strand, 26294080 - 26294005
Alignment:
Q  341 gacaaaaataaatgatactcattcgtttaaattgatgtagtgcatcaatacaatacaaattcaaagtcgctaaaaa 416  Q
    |||||||||||| |||| |||||| || |||| |||  ||| | || |||||||||||||||||| ||||||||||    
T  26294080 gacaaaaataaacgatattcattcattcaaatagatagagtacgtcgatacaatacaaattcaaattcgctaaaaa 26294005  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 342 - 416
Target Start/End: Original strand, 7771473 - 7771547
Alignment:
Q  342 acaaaaataaatgatactcattcgtttaaattgatgtagtgcatcaatacaatacaaattcaaagtcgctaaaaa 416  Q
    ||||||||||| |||| | |||| || |||||||| |||| |||| |||||||||||||  ||| ||||||||||    
T  7771473 acaaaaataaacgatatttattcattcaaattgatatagtacatcgatacaatacaaatctaaattcgctaaaaa 7771547  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 344 - 416
Target Start/End: Complemental strand, 6281511 - 6281439
Alignment:
Q  344 aaaaataaatgatactcattcgtttaaattgatgtagtgcatcaatacaatacaaattcaaagtcgctaaaaa 416  Q
    |||| |||| |||| |||||| || ||||||||  |||  ||| |||||||||||||||||| ||||||||||    
T  6281511 aaaagtaaacgatattcattcattcaaattgatagagtatatcgatacaatacaaattcaaattcgctaaaaa 6281439  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 343 - 403
Target Start/End: Complemental strand, 15710991 - 15710931
Alignment:
Q  343 caaaaataaatgatactcattcgtttaaattgatgtagtgcatcaatacaatacaaattca 403  Q
    ||||||||||||||| |||||| || ||||||||  | | |||||||||||| ||||||||    
T  15710991 caaaaataaatgatattcattcattcaaattgatagaatacatcaatacaatgcaaattca 15710931  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 44; Significance: 9e-16; HSPs: 26)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 44; E-Value: 9e-16
Query Start/End: Original strand, 341 - 416
Target Start/End: Complemental strand, 14585932 - 14585857
Alignment:
Q  341 gacaaaaataaatgatactcattcgtttaaattgatgtagtgcatcaatacaatacaaattcaaagtcgctaaaaa 416  Q
    |||||||||||| |||| |||||| || ||||||||  ||| ||||||||||||||||||||||| ||||||||||    
T  14585932 gacaaaaataaacgatattcattcattcaaattgatagagtacatcaatacaatacaaattcaaattcgctaaaaa 14585857  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 342 - 416
Target Start/End: Original strand, 53155090 - 53155164
Alignment:
Q  342 acaaaaataaatgatactcattcgtttaaattgatgtagtgcatcaatacaatacaaattcaaagtcgctaaaaa 416  Q
    ||||||||||| |||| |||||| |||||||||||  ||| |||| |||||||||||||||||| ||||||||||    
T  53155090 acaaaaataaacgatattcattcatttaaattgatagagtacatcgatacaatacaaattcaaattcgctaaaaa 53155164  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 341 - 416
Target Start/End: Original strand, 13701661 - 13701736
Alignment:
Q  341 gacaaaaataaatgatactcattcgtttaaattgatgtagtgcatcaatacaatacaaattcaaagtcgctaaaaa 416  Q
    |||||||||||| |||| |||||| || ||||||||  ||| |||| |||||||||||||||||| ||||||||||    
T  13701661 gacaaaaataaacgatattcattcattcaaattgatagagtacatcgatacaatacaaattcaaattcgctaaaaa 13701736  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 341 - 416
Target Start/End: Complemental strand, 19645660 - 19645585
Alignment:
Q  341 gacaaaaataaatgatactcattcgtttaaattgatgtagtgcatcaatacaatacaaattcaaagtcgctaaaaa 416  Q
    |||||||||||| |||| |||||| || ||||||||  ||| |||||||||||| |||||||||| ||||||||||    
T  19645660 gacaaaaataaacgatattcattcattcaaattgatagagtacatcaatacaattcaaattcaaattcgctaaaaa 19645585  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 341 - 416
Target Start/End: Original strand, 30155949 - 30156024
Alignment:
Q  341 gacaaaaataaatgatactcattcgtttaaattgatgtagtgcatcaatacaatacaaattcaaagtcgctaaaaa 416  Q
    |||||||||||| ||||||||||| || ||||||||  ||| |||| ||||||||||||| |||| ||||||||||    
T  30155949 gacaaaaataaacgatactcattcattcaaattgatagagtacatcgatacaatacaaatccaaattcgctaaaaa 30156024  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 344 - 416
Target Start/End: Complemental strand, 2192545 - 2192473
Alignment:
Q  344 aaaaataaatgatactcattcgtttaaattgatgtagtgcatcaatacaatacaaattcaaagtcgctaaaaa 416  Q
    ||||||||| |||| |||||| || ||||||||  ||| |||| |||||||||||||||||| ||||||||||    
T  2192545 aaaaataaacgatattcattcattcaaattgatagagtacatcgatacaatacaaattcaaattcgctaaaaa 2192473  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 341 - 416
Target Start/End: Complemental strand, 33637864 - 33637789
Alignment:
Q  341 gacaaaaataaatgatactcattcgtttaaattgatgtagtgcatcaatacaatacaaattcaaagtcgctaaaaa 416  Q
    |||||||||||| |||| |||||| || ||||||||  ||| |||| ||||||||||||| |||| ||||||||||    
T  33637864 gacaaaaataaacgatattcattcattcaaattgataaagtacatcgatacaatacaaatccaaattcgctaaaaa 33637789  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 341 - 416
Target Start/End: Complemental strand, 45047967 - 45047892
Alignment:
Q  341 gacaaaaataaatgatactcattcgtttaaattgatgtagtgcatcaatacaatacaaattcaaagtcgctaaaaa 416  Q
    ||||||||||||||||| |||||| || ||||||||  |||  ||| ||||||||||||| |||| ||||||||||    
T  45047967 gacaaaaataaatgatattcattcattcaaattgatagagtatatcgatacaatacaaatccaaattcgctaaaaa 45047892  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 341 - 416
Target Start/End: Original strand, 48652108 - 48652183
Alignment:
Q  341 gacaaaaataaatgatactcattcgtttaaattgatgtagtgcatcaatacaatacaaattcaaagtcgctaaaaa 416  Q
    ||||||||||||||||| |||||| || ||||||||  ||| |||| ||||||||||| | |||| ||||||||||    
T  48652108 gacaaaaataaatgatattcattcattcaaattgataaagtacatcgatacaatacaactccaaattcgctaaaaa 48652183  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 341 - 416
Target Start/End: Complemental strand, 55455332 - 55455257
Alignment:
Q  341 gacaaaaataaatgatactcattcgtttaaattgatgtagtgcatcaatacaatacaaattcaaagtcgctaaaaa 416  Q
    |||||||||||| |||| |||||| || ||||||||  ||| |||  |||||||||||||||||| ||||||||||    
T  55455332 gacaaaaataaacgatattcattcattcaaattgatagagtacattgatacaatacaaattcaaattcgctaaaaa 55455257  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 345 - 407
Target Start/End: Original strand, 41598139 - 41598201
Alignment:
Q  345 aaaataaatgatactcattcgtttaaattgatgtagtgcatcaatacaatacaaattcaaagt 407  Q
    |||||||| |||| |||||  ||||||||||| |||| ||||||||| |||||||||||||||    
T  41598139 aaaataaacgatattcatttatttaaattgatatagtacatcaatacgatacaaattcaaagt 41598201  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 342 - 416
Target Start/End: Original strand, 41867993 - 41868067
Alignment:
Q  342 acaaaaataaatgatactcattcgtttaaattgatgtagtgcatcaatacaatacaaattcaaagtcgctaaaaa 416  Q
    ||||||||||| ||||  ||||| || ||||||||  ||| |||| |||||||||||||||||| ||||||||||    
T  41867993 acaaaaataaacgatatgcattcattcaaattgatagagtacatcgatacaatacaaattcaaattcgctaaaaa 41868067  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 342 - 416
Target Start/End: Original strand, 55090359 - 55090433
Alignment:
Q  342 acaaaaataaatgatactcattcgtttaaattgatgtagtgcatcaatacaatacaaattcaaagtcgctaaaaa 416  Q
    ||||||||||| |||| |||||| || ||||||||  ||| |||| ||||||||||||| |||| ||||||||||    
T  55090359 acaaaaataaacgatattcattcattcaaattgatagagtacatcgatacaatacaaatccaaattcgctaaaaa 55090433  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 341 - 402
Target Start/End: Complemental strand, 4020047 - 4019986
Alignment:
Q  341 gacaaaaataaatgatactcattcgtttaaattgatgtagtgcatcaatacaatacaaattc 402  Q
    ||||||||||||||||| |||||| || ||||||||  |||||||| ||||||| |||||||    
T  4020047 gacaaaaataaatgatattcattcattcaaattgatagagtgcatcgatacaatgcaaattc 4019986  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 344 - 416
Target Start/End: Complemental strand, 3457389 - 3457317
Alignment:
Q  344 aaaaataaatgatactcattcgtttaaattgatgtagtgcatcaatacaatacaaattcaaagtcgctaaaaa 416  Q
    ||||||||| |||| |||||| |||||||||||  ||| |||  ||||||||||||| |||| ||||||||||    
T  3457389 aaaaataaacgatattcattcatttaaattgatagagtacattgatacaatacaaatccaaattcgctaaaaa 3457317  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 341 - 417
Target Start/End: Complemental strand, 11819554 - 11819478
Alignment:
Q  341 gacaaaaataaatgatactcattcgtttaaattgatgtagtgcatcaatacaatacaaattcaaagtcgctaaaaaa 417  Q
    |||||||||||| |||| |||||| || ||||||||  ||| |||| ||||||||||||| |||| |||||| ||||    
T  11819554 gacaaaaataaacgatattcattcattcaaattgatagagtacatcgatacaatacaaatccaaattcgctataaaa 11819478  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 344 - 416
Target Start/End: Original strand, 50981128 - 50981200
Alignment:
Q  344 aaaaataaatgatactcattcgtttaaattgatgtagtgcatcaatacaatacaaattcaaagtcgctaaaaa 416  Q
    ||||||||| |||| |||||| || ||||||||  ||| |||||||| | |||||||| ||||||||||||||    
T  50981128 aaaaataaacgatattcattcattcaaattgatagagtacatcaatatagtacaaatttaaagtcgctaaaaa 50981200  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 344 - 416
Target Start/End: Original strand, 51084262 - 51084334
Alignment:
Q  344 aaaaataaatgatactcattcgtttaaattgatgtagtgcatcaatacaatacaaattcaaagtcgctaaaaa 416  Q
    ||||||||| |||| |||||| || ||||||||  ||| |||||||| | |||||||| ||||||||||||||    
T  51084262 aaaaataaacgatattcattcattcaaattgatagagtacatcaatatagtacaaatttaaagtcgctaaaaa 51084334  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 341 - 416
Target Start/End: Original strand, 24483355 - 24483430
Alignment:
Q  341 gacaaaaataaatgatactcattcgtttaaattgatgtagtgcatcaatacaatacaaattcaaagtcgctaaaaa 416  Q
    |||||||||||| |||| |||||| || ||||||||  ||| |||| ||| ||||||||| |||| ||||||||||    
T  24483355 gacaaaaataaacgatattcattcattcaaattgatagagtacatcgatagaatacaaatccaaattcgctaaaaa 24483430  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 341 - 416
Target Start/End: Complemental strand, 31270779 - 31270704
Alignment:
Q  341 gacaaaaataaatgatactcattcgtttaaattgatgtagtgcatcaatacaatacaaattcaaagtcgctaaaaa 416  Q
    |||||||||| | |||| | |||| || |||| |||  ||| ||||||||||||||||||||||| ||||||||||    
T  31270779 gacaaaaatatacgatatttattcattcaaatggatagagtacatcaatacaatacaaattcaaattcgctaaaaa 31270704  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 345 - 416
Target Start/End: Original strand, 32080426 - 32080497
Alignment:
Q  345 aaaataaatgatactcattcgtttaaattgatgtagtgcatcaatacaatacaaattcaaagtcgctaaaaa 416  Q
    |||||||| |||| || ||| || ||||||||  ||| |||| |||||||||||||||||| ||||||||||    
T  32080426 aaaataaacgatattctttcattcaaattgatagagtacatcgatacaatacaaattcaaattcgctaaaaa 32080497  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 342 - 416
Target Start/End: Original strand, 49627764 - 49627838
Alignment:
Q  342 acaaaaataaatgatactcattcgtttaaattgatgtagtgcatcaatacaatacaaattcaaagtcgctaaaaa 416  Q
    ||||||||||| |||| |||||| || ||||||||  ||| |||| |||||||| |||| |||| ||||||||||    
T  49627764 acaaaaataaacgatattcattcattcaaattgatagagtacatcgatacaatataaatccaaattcgctaaaaa 49627838  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 388 - 416
Target Start/End: Complemental strand, 550603 - 550575
Alignment:
Q  388 atacaatacaaattcaaagtcgctaaaaa 416  Q
    |||||||||||||||||||||||||||||    
T  550603 atacaatacaaattcaaagtcgctaaaaa 550575  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 388 - 416
Target Start/End: Original strand, 2522785 - 2522813
Alignment:
Q  388 atacaatacaaattcaaagtcgctaaaaa 416  Q
    |||||||||||||||||||||||||||||    
T  2522785 atacaatacaaattcaaagtcgctaaaaa 2522813  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 341 - 416
Target Start/End: Complemental strand, 19148446 - 19148370
Alignment:
Q  341 gacaaaaataaatgatact-cattcgtttaaattgatgtagtgcatcaatacaatacaaattcaaagtcgctaaaaa 416  Q
    |||||||||||| |||| | ||||| || ||||||||   || |||| |||||||||||||||||| ||||||||||    
T  19148446 gacaaaaataaacgatatttcattcattcaaattgatagtgtacatcgatacaatacaaattcaaattcgctaaaaa 19148370  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 344 - 416
Target Start/End: Original strand, 31462417 - 31462489
Alignment:
Q  344 aaaaataaatgatactcattcgtttaaattgatgtagtgcatcaatacaatacaaattcaaagtcgctaaaaa 416  Q
    |||| |||| |||| |||||| || ||||||||  ||| |||| |||||||||||||| ||| ||||||||||    
T  31462417 aaaagtaaacgatattcattcattcaaattgataaagtacatcgatacaatacaaatttaaattcgctaaaaa 31462489  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 43; Significance: 0.000000000000003; HSPs: 20)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 342 - 416
Target Start/End: Complemental strand, 32879162 - 32879088
Alignment:
Q  342 acaaaaataaatgatactcattcgtttaaattgatgtagtgcatcaatacaatacaaattcaaagtcgctaaaaa 416  Q
    ||||||||||| |||| |||||| || |||||||| |||| |||| ||||||||||||| |||||||||||||||    
T  32879162 acaaaaataaacgataatcattcattcaaattgatttagtacatcgatacaatacaaatccaaagtcgctaaaaa 32879088  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 344 - 416
Target Start/End: Original strand, 25032757 - 25032829
Alignment:
Q  344 aaaaataaatgatactcattcgtttaaattgatgtagtgcatcaatacaatacaaattcaaagtcgctaaaaa 416  Q
    ||||||||| |||| |||||| || ||||||||  ||| |||| |||||||||||||||||||||||||||||    
T  25032757 aaaaataaacgatattcattcattcaaattgatagagtacatcgatacaatacaaattcaaagtcgctaaaaa 25032829  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 341 - 417
Target Start/End: Original strand, 4882028 - 4882104
Alignment:
Q  341 gacaaaaataaatgatactcattcgtttaaattgatgtagtgcatcaatacaatacaaattcaaagtcgctaaaaaa 417  Q
    |||||||||||| |||| |||||| || ||||||||  ||| |||| ||||||||||||| |||| |||||||||||    
T  4882028 gacaaaaataaacgatattcattcattcaaattgatagagtacatcgatacaatacaaatccaaattcgctaaaaaa 4882104  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 341 - 416
Target Start/End: Original strand, 15790927 - 15791002
Alignment:
Q  341 gacaaaaataaatgatactcattcgtttaaattgatgtagtgcatcaatacaatacaaattcaaagtcgctaaaaa 416  Q
    |||||||||||| |||| |||||  || ||||||||  ||| |||| |||||||||||||||||| ||||||||||    
T  15790927 gacaaaaataaaagatattcatttattcaaattgataaagtacatcgatacaatacaaattcaaattcgctaaaaa 15791002  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 342 - 403
Target Start/End: Original strand, 22031768 - 22031829
Alignment:
Q  342 acaaaaataaatgatactcattcgtttaaattgatgtagtgcatcaatacaatacaaattca 403  Q
    |||||||||| ||||| |||||| || ||||||||  ||| |||||||||||||||||||||    
T  22031768 acaaaaataattgatattcattcattcaaattgatagagtacatcaatacaatacaaattca 22031829  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 344 - 416
Target Start/End: Original strand, 13488190 - 13488262
Alignment:
Q  344 aaaaataaatgatactcattcgtttaaattgatgtagtgcatcaatacaatacaaattcaaagtcgctaaaaa 416  Q
    |||||||| ||||| |||||| || ||||||||  ||| |||| ||||||||||||| |||| ||||||||||    
T  13488190 aaaaataattgatattcattcattcaaattgatagagtacatcgatacaatacaaatccaaattcgctaaaaa 13488262  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 344 - 403
Target Start/End: Complemental strand, 26771552 - 26771493
Alignment:
Q  344 aaaaataaatgatactcattcgtttaaattgatgtagtgcatcaatacaatacaaattca 403  Q
    |||||||||||||| |||||| || ||||||||  ||| |||| ||||||||||||||||    
T  26771552 aaaaataaatgatattcattcattcaaattgatagagtacatcgatacaatacaaattca 26771493  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 341 - 416
Target Start/End: Original strand, 28677790 - 28677865
Alignment:
Q  341 gacaaaaataaatgatactcattcgtttaaattgatgtagtgcatcaatacaatacaaattcaaagtcgctaaaaa 416  Q
    |||||||||||| |||| |||||  || ||||||||  ||| |||| ||||||||||||| |||| ||||||||||    
T  28677790 gacaaaaataaacgatattcatttattcaaattgatagagtacatcgatacaatacaaatccaaattcgctaaaaa 28677865  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 341 - 416
Target Start/End: Complemental strand, 29205738 - 29205663
Alignment:
Q  341 gacaaaaataaatgatactcattcgtttaaattgatgtagtgcatcaatacaatacaaattcaaagtcgctaaaaa 416  Q
    |||||||||||| |||| |||||| || ||||||||  ||| |||| |||||||| |||| |||| ||||||||||    
T  29205738 gacaaaaataaacgatattcattcattcaaattgatagagtacatcgatacaataaaaatccaaattcgctaaaaa 29205663  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 341 - 416
Target Start/End: Complemental strand, 32784549 - 32784474
Alignment:
Q  341 gacaaaaataaatgatactcattcgtttaaattgatgtagtgcatcaatacaatacaaattcaaagtcgctaaaaa 416  Q
    ||||||||||||  ||| |||||  || ||||||||  ||| |||| |||||||||||||||||| ||||||||||    
T  32784549 gacaaaaataaactatattcattaattcaaattgatagagtacatcgatacaatacaaattcaaattcgctaaaaa 32784474  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 341 - 416
Target Start/End: Complemental strand, 44517618 - 44517543
Alignment:
Q  341 gacaaaaataaatgatactcattcgtttaaattgatgtagtgcatcaatacaatacaaattcaaagtcgctaaaaa 416  Q
    |||||||||||| |||| |||||| || ||||||||  ||| |||| ||||||||||||| |||| || |||||||    
T  44517618 gacaaaaataaacgatattcattcattcaaattgatagagtacatcgatacaatacaaatccaaattcactaaaaa 44517543  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 341 - 415
Target Start/End: Complemental strand, 1141148 - 1141074
Alignment:
Q  341 gacaaaaataaatgatactcattcgtttaaattgatgtagtgcatcaatacaatacaaattcaaagtcgctaaaa 415  Q
    |||||||||||| |||| |||||| ||||||| |||  | | |||||||| |||| ||||||||||| |||||||    
T  1141148 gacaaaaataaacgatattcattcttttaaatcgatagaatacatcaatataatataaattcaaagttgctaaaa 1141074  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 387 - 417
Target Start/End: Complemental strand, 8737941 - 8737911
Alignment:
Q  387 aatacaatacaaattcaaagtcgctaaaaaa 417  Q
    |||||||||||||||||||||||||||||||    
T  8737941 aatacaatacaaattcaaagtcgctaaaaaa 8737911  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 342 - 416
Target Start/End: Original strand, 10188542 - 10188616
Alignment:
Q  342 acaaaaataaatgatactcattcgtttaaattgatgtagtgcatcaatacaatacaaattcaaagtcgctaaaaa 416  Q
    |||||||||||| ||| |||||| || ||||| ||  ||| |||   ||||||||||||||||||||||||||||    
T  10188542 acaaaaataaataatattcattcattcaaattaatagagtacattggtacaatacaaattcaaagtcgctaaaaa 10188616  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 342 - 416
Target Start/End: Original strand, 37822015 - 37822089
Alignment:
Q  342 acaaaaataaatgatactcattcgtttaaattgatgtagtgcatcaatacaatacaaattcaaagtcgctaaaaa 416  Q
    ||||||||||| |||| ||||||  | ||||||||  ||| |||| ||||||||||||| |||| ||||||||||    
T  37822015 acaaaaataaacgatattcattcactcaaattgatagagtacatcgatacaatacaaatccaaattcgctaaaaa 37822089  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 342 - 416
Target Start/End: Complemental strand, 27535162 - 27535092
Alignment:
Q  342 acaaaaataaatgatactcattcgtttaaattgatgtagtgcatcaatacaatacaaattcaaagtcgctaaaaa 416  Q
    ||||||||||| |||| ||||||    ||||||||  ||| |||| |||||||||||||||||| ||||||||||    
T  27535162 acaaaaataaacgatattcattc----aaattgatagagtacatcgatacaatacaaattcaaattcgctaaaaa 27535092  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 383 - 416
Target Start/End: Complemental strand, 29938628 - 29938595
Alignment:
Q  383 catcaatacaatacaaattcaaagtcgctaaaaa 416  Q
    |||| |||||||||||||||||||||||||||||    
T  29938628 catcgatacaatacaaattcaaagtcgctaaaaa 29938595  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 341 - 416
Target Start/End: Original strand, 7995230 - 7995303
Alignment:
Q  341 gacaaaaataaatgatactcattcgtttaaattgatgtagtgcatcaatacaatacaaattcaaagtcgctaaaaa 416  Q
    |||||||||||||  || |||||| ||||||||||  |||| ||||  |||||||||||| |||| ||||||||||    
T  7995230 gacaaaaataaattgtattcattcatttaaattga--tagtacatcggtacaatacaaatccaaattcgctaaaaa 7995303  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 344 - 416
Target Start/End: Complemental strand, 12537986 - 12537914
Alignment:
Q  344 aaaaataaatgatactcattcgtttaaattgatgtagtgcatcaatacaatacaaattcaaagtcgctaaaaa 416  Q
    |||||||||||||| | |||  || ||||||||  ||| ||||||||||||| |||| |||||| ||||||||    
T  12537986 aaaaataaatgatattaatttattcaaattgatagagtacatcaatacaatataaatgcaaagttgctaaaaa 12537914  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 388 - 416
Target Start/End: Original strand, 25689551 - 25689579
Alignment:
Q  388 atacaatacaaattcaaagtcgctaaaaa 416  Q
    |||||||||||||||||||||||||||||    
T  25689551 atacaatacaaattcaaagtcgctaaaaa 25689579  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 40; Significance: 0.0000000000002; HSPs: 16)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 341 - 416
Target Start/End: Complemental strand, 30813527 - 30813452
Alignment:
Q  341 gacaaaaataaatgatactcattcgtttaaattgatgtagtgcatcaatacaatacaaattcaaagtcgctaaaaa 416  Q
    |||||||||||| |||| |||||| || ||||||||  ||| |||| |||||||||||||||||| ||||||||||    
T  30813527 gacaaaaataaacgatattcattcattcaaattgatagagtacatcgatacaatacaaattcaaattcgctaaaaa 30813452  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 341 - 416
Target Start/End: Complemental strand, 31705635 - 31705560
Alignment:
Q  341 gacaaaaataaatgatactcattcgtttaaattgatgtagtgcatcaatacaatacaaattcaaagtcgctaaaaa 416  Q
    |||||||||||| |||| |||||| |||||||||||  ||| |||| |||||||||||||||||| | ||||||||    
T  31705635 gacaaaaataaacgatattcattcatttaaattgatagagtacatcgatacaatacaaattcaaattggctaaaaa 31705560  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 343 - 417
Target Start/End: Original strand, 5527301 - 5527375
Alignment:
Q  343 caaaaataaatgatactcattcgtttaaattgatgtagtgcatcaatacaatacaaattcaaagtcgctaaaaaa 417  Q
    ||||||||||||||| |||||| ||  |||||||  ||| ||||||||||||| ||||||||||||| |||||||    
T  5527301 caaaaataaatgatattcattcattcgaattgatagagtacatcaatacaatataaattcaaagtcgttaaaaaa 5527375  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 341 - 416
Target Start/End: Original strand, 6295900 - 6295975
Alignment:
Q  341 gacaaaaataaatgatactcattcgtttaaattgatgtagtgcatcaatacaatacaaattcaaagtcgctaaaaa 416  Q
    ||||||||||||| ||| |||||| || ||||||||  ||| |||| |||||||||||||||||| | ||||||||    
T  6295900 gacaaaaataaataatattcattcattcaaattgatagagtacatcgatacaatacaaattcaaatttgctaaaaa 6295975  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 341 - 416
Target Start/End: Original strand, 6302710 - 6302785
Alignment:
Q  341 gacaaaaataaatgatactcattcgtttaaattgatgtagtgcatcaatacaatacaaattcaaagtcgctaaaaa 416  Q
    ||||||||||||| ||| |||||| || ||||||||  ||| |||| |||||||||||||||||| | ||||||||    
T  6302710 gacaaaaataaataatattcattcattcaaattgatagagtacatcgatacaatacaaattcaaatttgctaaaaa 6302785  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 341 - 416
Target Start/End: Original strand, 21507505 - 21507580
Alignment:
Q  341 gacaaaaataaatgatactcattcgtttaaattgatgtagtgcatcaatacaatacaaattcaaagtcgctaaaaa 416  Q
    |||||||||||| |||| |||||| || ||| ||||  ||| |||||||||||||||||| |||| ||||||||||    
T  21507505 gacaaaaataaacgatattcattcattcaaactgatagagtacatcaatacaatacaaatccaaattcgctaaaaa 21507580  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 341 - 416
Target Start/End: Complemental strand, 23654719 - 23654644
Alignment:
Q  341 gacaaaaataaatgatactcattcgtttaaattgatgtagtgcatcaatacaatacaaattcaaagtcgctaaaaa 416  Q
    |||||||||||| |||| |||||| || ||||||||  ||| |||| ||||||||||||| |||| ||||||||||    
T  23654719 gacaaaaataaacgatattcattcattcaaattgatagagtacatcgatacaatacaaatccaaattcgctaaaaa 23654644  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 342 - 416
Target Start/End: Original strand, 12653970 - 12654044
Alignment:
Q  342 acaaaaataaatgatactcattcgtttaaattgatgtagtgcatcaatacaatacaaattcaaagtcgctaaaaa 416  Q
    ||||||||||| |||| |||||| || ||||||||  ||| |||| ||||||||||| | |||||||||||||||    
T  12653970 acaaaaataaacgatattcattcattcaaattgatagagtacatcgatacaatacaattccaaagtcgctaaaaa 12654044  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 341 - 416
Target Start/End: Original strand, 2304489 - 2304564
Alignment:
Q  341 gacaaaaataaatgatactcattcgtttaaattgatgtagtgcatcaatacaatacaaattcaaagtcgctaaaaa 416  Q
    ||||||| |||| |||| |||||| |||||||||||  ||| |||| || ||||||||||| ||| ||||||||||    
T  2304489 gacaaaagtaaacgatattcattcatttaaattgatagagtacatcgatgcaatacaaatttaaattcgctaaaaa 2304564  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 341 - 416
Target Start/End: Complemental strand, 5146396 - 5146321
Alignment:
Q  341 gacaaaaataaatgatactcattcgtttaaattgatgtagtgcatcaatacaatacaaattcaaagtcgctaaaaa 416  Q
    |||||||||||| |||| |||||| || ||||||||  ||| |||| ||| ||||||||| |||| ||||||||||    
T  5146396 gacaaaaataaacgatattcattcattcaaattgatagagtacatcgatataatacaaatccaaattcgctaaaaa 5146321  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 341 - 416
Target Start/End: Original strand, 12481030 - 12481105
Alignment:
Q  341 gacaaaaataaatgatactcattcgtttaaattgatgtagtgcatcaatacaatacaaattcaaagtcgctaaaaa 416  Q
    |||||||||||| |||| |||||| || ||||||||  ||| |||| ||||||||||||| |||| | ||||||||    
T  12481030 gacaaaaataaacgatattcattcattcaaattgataaagtacatcgatacaatacaaatccaaatttgctaaaaa 12481105  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 341 - 416
Target Start/End: Original strand, 35219564 - 35219639
Alignment:
Q  341 gacaaaaataaatgatactcattcgtttaaattgatgtagtgcatcaatacaatacaaattcaaagtcgctaaaaa 416  Q
    |||||||||||| |||| |||||| || |||||| |  ||| |||| ||||||||||||| |||| ||||||||||    
T  35219564 gacaaaaataaacgatattcattcattcaaattggtagagtacatcgatacaatacaaatccaaattcgctaaaaa 35219639  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 366 - 412
Target Start/End: Original strand, 16328766 - 16328812
Alignment:
Q  366 tttaaattgatgtagtgcatcaatacaatacaaattcaaagtcgcta 412  Q
    |||||||||||  ||| |||| |||||||||||||||||||||||||    
T  16328766 tttaaattgatagagtacatccatacaatacaaattcaaagtcgcta 16328812  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 342 - 416
Target Start/End: Original strand, 19402504 - 19402578
Alignment:
Q  342 acaaaaataaatgatactcattcgtttaaattgatgtagtgcatcaatacaatacaaattcaaagtcgctaaaaa 416  Q
    ||||||||||| |||| |||||| || ||||||||  ||| |||| ||||||||||||| |||| ||| ||||||    
T  19402504 acaaaaataaacgatattcattcattcaaattgatagagtacatcgatacaatacaaatccaaattcgttaaaaa 19402578  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 346 - 415
Target Start/End: Complemental strand, 14731070 - 14731001
Alignment:
Q  346 aaataaatgatactcattcgtttaaattgatgtagtgcatcaatacaatacaaattcaaagtcgctaaaa 415  Q
    |||||||||||| |||||| || ||||||||    | |||| |||||||||| |||||||||||||||||    
T  14731070 aaataaatgatattcattcattcaaattgataacatacatcgatacaatacatattcaaagtcgctaaaa 14731001  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 341 - 405
Target Start/End: Original strand, 21942092 - 21942156
Alignment:
Q  341 gacaaaaataaatgatactcattcgtttaaattgatgtagtgcatcaatacaatacaaattcaaa 405  Q
    ||||||||||||||||| | |||| || ||||||||||||  |||| ||| |||| |||||||||    
T  21942092 gacaaaaataaatgatattaattcattcaaattgatgtagcacatcgatataataaaaattcaaa 21942156  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 40; Significance: 0.0000000000002; HSPs: 31)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 341 - 416
Target Start/End: Complemental strand, 6912150 - 6912075
Alignment:
Q  341 gacaaaaataaatgatactcattcgtttaaattgatgtagtgcatcaatacaatacaaattcaaagtcgctaaaaa 416  Q
    |||||||||||| | || |||||| || ||||||||  ||| ||||||||||||||||||||||| ||||||||||    
T  6912150 gacaaaaataaacgttattcattcattcaaattgatagagtacatcaatacaatacaaattcaaattcgctaaaaa 6912075  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 341 - 416
Target Start/End: Original strand, 18502493 - 18502568
Alignment:
Q  341 gacaaaaataaatgatactcattcgtttaaattgatgtagtgcatcaatacaatacaaattcaaagtcgctaaaaa 416  Q
    |||||||||||| |||| |||||| |||||||||||  ||| |||| ||||||||||||| |||| ||||||||||    
T  18502493 gacaaaaataaacgatattcattcatttaaattgatagagtacatcgatacaatacaaatccaaattcgctaaaaa 18502568  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 369 - 415
Target Start/End: Original strand, 31444766 - 31444812
Alignment:
Q  369 aaattgatgtagtgcatcaatacaatacaaattcaaagtcgctaaaa 415  Q
    |||||||| ||||||||||||||||||||||||||||||| ||||||    
T  31444766 aaattgatatagtgcatcaatacaatacaaattcaaagtcactaaaa 31444812  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 342 - 416
Target Start/End: Complemental strand, 56062443 - 56062369
Alignment:
Q  342 acaaaaataaatgatactcattcgtttaaattgatgtagtgcatcaatacaatacaaattcaaagtcgctaaaaa 416  Q
    ||||| |||||| ||| |||||| || |||||||| |||| |||  |||||||||||||||||||||||||||||    
T  56062443 acaaagataaataatattcattcattaaaattgatatagtacattcatacaatacaaattcaaagtcgctaaaaa 56062369  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 341 - 416
Target Start/End: Original strand, 20887408 - 20887483
Alignment:
Q  341 gacaaaaataaatgatactcattcgtttaaattgatgtagtgcatcaatacaatacaaattcaaagtcgctaaaaa 416  Q
    |||||||||||| |||| |||||| |||||||||||  ||| |||| |||||||| |||| |||| ||||||||||    
T  20887408 gacaaaaataaacgatattcattcatttaaattgatagagtacatcgatacaatataaatccaaattcgctaaaaa 20887483  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 341 - 416
Target Start/End: Complemental strand, 24100603 - 24100528
Alignment:
Q  341 gacaaaaataaatgatactcattcgtttaaattgatgtagtgcatcaatacaatacaaattcaaagtcgctaaaaa 416  Q
    ||||||||||||||||| |||||| || ||||||||  ||| |||| ||||||||||||| |||  ||||||||||    
T  24100603 gacaaaaataaatgatattcattcattcaaattgatagagtacatcgatacaatacaaatccaatttcgctaaaaa 24100528  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 341 - 416
Target Start/End: Complemental strand, 27395286 - 27395211
Alignment:
Q  341 gacaaaaataaatgatactcattcgtttaaattgatgtagtgcatcaatacaatacaaattcaaagtcgctaaaaa 416  Q
    ||||||||||||| ||| |||||| || ||||||||  ||| |||| ||| |||||||||||||| ||||||||||    
T  27395286 gacaaaaataaataatattcattcattcaaattgatagagttcatcgatataatacaaattcaaattcgctaaaaa 27395211  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 341 - 416
Target Start/End: Complemental strand, 42198023 - 42197948
Alignment:
Q  341 gacaaaaataaatgatactcattcgtttaaattgatgtagtgcatcaatacaatacaaattcaaagtcgctaaaaa 416  Q
    |||||||||||| |||| |||||| || ||||||||  ||| |||| |||||||||||||||||| | ||||||||    
T  42198023 gacaaaaataaacgatattcattcattcaaattgatagagtacatcgatacaatacaaattcaaatttgctaaaaa 42197948  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 341 - 416
Target Start/End: Original strand, 56236482 - 56236557
Alignment:
Q  341 gacaaaaataaatgatactcattcgtttaaattgatgtagtgcatcaatacaatacaaattcaaagtcgctaaaaa 416  Q
    ||||||||||||||||| |||||| || ||||||||  ||| |||| |||||||||| || |||| ||||||||||    
T  56236482 gacaaaaataaatgatattcattcattcaaattgatagagtacatcgatacaatacatatccaaaatcgctaaaaa 56236557  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 342 - 416
Target Start/End: Original strand, 36124009 - 36124083
Alignment:
Q  342 acaaaaataaatgatactcattcgtttaaattgatgtagtgcatcaatacaatacaaattcaaagtcgctaaaaa 416  Q
    ||||||||||| |||| |||||| || ||||||||  ||| |||| ||||||||||||| |||| ||||||||||    
T  36124009 acaaaaataaacgatattcattctttcaaattgatagagtccatcgatacaatacaaatccaaattcgctaaaaa 36124083  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 342 - 416
Target Start/End: Complemental strand, 41837783 - 41837709
Alignment:
Q  342 acaaaaataaatgatactcattcgtttaaattgatgtagtgcatcaatacaatacaaattcaaagtcgctaaaaa 416  Q
    ||||||||||| |||| | |||| || ||||||||  ||| |||||||||| |||||||||||||||| ||||||    
T  41837783 acaaaaataaacgataattattcattcaaattgatagagtacatcaatacactacaaattcaaagtcgttaaaaa 41837709  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 342 - 416
Target Start/End: Original strand, 45350722 - 45350796
Alignment:
Q  342 acaaaaataaatgatactcattcgtttaaattgatgtagtgcatcaatacaatacaaattcaaagtcgctaaaaa 416  Q
    ||||||||||| |||| |||||| || ||||||||  ||| |||| ||||||||||||| |||| ||||||||||    
T  45350722 acaaaaataaacgatattcattcattcaaattgatagagtacatcgatacaatacaaatccaaattcgctaaaaa 45350796  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 342 - 416
Target Start/End: Original strand, 45360201 - 45360275
Alignment:
Q  342 acaaaaataaatgatactcattcgtttaaattgatgtagtgcatcaatacaatacaaattcaaagtcgctaaaaa 416  Q
    ||||||||||| |||| |||||| || ||||||||  ||| |||| ||||||||||||| |||| ||||||||||    
T  45360201 acaaaaataaacgatattcattcattcaaattgatagagtacatcgatacaatacaaatccaaattcgctaaaaa 45360275  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 344 - 416
Target Start/End: Original strand, 626213 - 626285
Alignment:
Q  344 aaaaataaatgatactcattcgtttaaattgatgtagtgcatcaatacaatacaaattcaaagtcgctaaaaa 416  Q
    |||||||||||| | |||||| || ||||||||  ||| |||| |||||||||||||||||| | ||||||||    
T  626213 aaaaataaatgaaattcattcattcaaattgatagagtacatcgatacaatacaaattcaaatttgctaaaaa 626285  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 344 - 416
Target Start/End: Complemental strand, 28837522 - 28837450
Alignment:
Q  344 aaaaataaatgatactcattcgtttaaattgatgtagtgcatcaatacaatacaaattcaaagtcgctaaaaa 416  Q
    |||||||| ||||| |||||| || ||||||||  ||| |||| ||||||||||||| |||| ||||||||||    
T  28837522 aaaaataactgatattcattcattcaaattgatagagtacatcgatacaatacaaatccaaattcgctaaaaa 28837450  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 341 - 416
Target Start/End: Complemental strand, 3159432 - 3159357
Alignment:
Q  341 gacaaaaataaatgatactcattcgtttaaattgatgtagtgcatcaatacaatacaaattcaaagtcgctaaaaa 416  Q
    ||||||| ||||  ||| |||||| || ||||||||  ||| |||| ||||||||||||||||||||| |||||||    
T  3159432 gacaaaattaaactatattcattcattcaaattgataaagtacatcgatacaatacaaattcaaagtcactaaaaa 3159357  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 341 - 416
Target Start/End: Complemental strand, 6882414 - 6882339
Alignment:
Q  341 gacaaaaataaatgatactcattcgtttaaattgatgtagtgcatcaatacaatacaaattcaaagtcgctaaaaa 416  Q
    ||||||| |||| |||| |||||| || ||||||||  ||| |||| ||||||||||||| |||| ||||||||||    
T  6882414 gacaaaagtaaacgatattcattcattcaaattgatagagtacatcgatacaatacaaatccaaattcgctaaaaa 6882339  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 341 - 416
Target Start/End: Complemental strand, 13966013 - 13965938
Alignment:
Q  341 gacaaaaataaatgatactcattcgtttaaattgatgtagtgcatcaatacaatacaaattcaaagtcgctaaaaa 416  Q
    |||||||||||| |||| |||||| || ||||||||  ||| |||| ||||||||||||| |||| || |||||||    
T  13966013 gacaaaaataaacgatattcattcattcaaattgatagagtacatcgatacaatacaaatccaaattccctaaaaa 13965938  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 341 - 416
Target Start/End: Original strand, 38943808 - 38943883
Alignment:
Q  341 gacaaaaataaatgatactcattcgtttaaattgatgtagtgcatcaatacaatacaaattcaaagtcgctaaaaa 416  Q
    |||| |||||||||||| |||||| || ||||||||  ||| |||| ||||||||||||| ||||  |||||||||    
T  38943808 gacacaaataaatgatattcattcattcaaattgatagagtacatcgatacaatacaaatccaaatccgctaaaaa 38943883  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 341 - 416
Target Start/End: Original strand, 43244032 - 43244107
Alignment:
Q  341 gacaaaaataaatgatactcattcgtttaaattgatgtagtgcatcaatacaatacaaattcaaagtcgctaaaaa 416  Q
    |||||||||||| |||| |||||| || ||||||||  ||| || | ||||||||||||| |||| ||||||||||    
T  43244032 gacaaaaataaacgatattcattcattcaaattgatagagtacaccgatacaatacaaatccaaattcgctaaaaa 43244107  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 342 - 416
Target Start/End: Original strand, 393926 - 394000
Alignment:
Q  342 acaaaaataaatgatactcattcgtttaaattgatgtagtgcatcaatacaatacaaattcaaagtcgctaaaaa 416  Q
    ||||||||||| |||| |||||| || ||||||||  ||| |||| ||||||||||||| |||| ||| ||||||    
T  393926 acaaaaataaacgatattcattcattcaaattgataaagtacatcgatacaatacaaatccaaattcgttaaaaa 394000  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 342 - 416
Target Start/End: Original strand, 8517111 - 8517185
Alignment:
Q  342 acaaaaataaatgatactcattcgtttaaattgatgtagtgcatcaatacaatacaaattcaaagtcgctaaaaa 416  Q
    ||||||||||| |||| |||||| || ||||||||  ||| |||  ||||||||||||| |||| ||||||||||    
T  8517111 acaaaaataaacgatattcattcattcaaattgatagagtacattgatacaatacaaatccaaattcgctaaaaa 8517185  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 342 - 416
Target Start/End: Original strand, 11209965 - 11210039
Alignment:
Q  342 acaaaaataaatgatactcattcgtttaaattgatgtagtgcatcaatacaatacaaattcaaagtcgctaaaaa 416  Q
    ||||||||||| |||| |||||| || ||||||||  ||| |||||||||||| ||||| |||| || |||||||    
T  11209965 acaaaaataaaagatattcattcattcaaattgatagagtacatcaatacaatgcaaatccaaattcactaaaaa 11210039  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 342 - 416
Target Start/End: Complemental strand, 37431625 - 37431551
Alignment:
Q  342 acaaaaataaatgatactcattcgtttaaattgatgtagtgcatcaatacaatacaaattcaaagtcgctaaaaa 416  Q
    ||||||||||| |||| || ||| |||||||||||  |||  ||| |||||||||||||||||| | ||||||||    
T  37431625 acaaaaataaacgatattctttcttttaaattgatagagtatatcgatacaatacaaattcaaaattgctaaaaa 37431551  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 342 - 400
Target Start/End: Original strand, 55600198 - 55600256
Alignment:
Q  342 acaaaaataaatgatactcattcgtttaaattgatgtagtgcatcaatacaatacaaat 400  Q
    ||||||||||| |||| |||||| || ||||||||  |||||||| |||||||||||||    
T  55600198 acaaaaataaacgatattcattcattcaaattgatagagtgcatcgatacaatacaaat 55600256  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 268 - 306
Target Start/End: Complemental strand, 56062443 - 56062405
Alignment:
Q  268 acaaagataaataatattcattcgtttaaattgatatag 306  Q
    ||||||||||||||||||||||| || ||||||||||||    
T  56062443 acaaagataaataatattcattcattaaaattgatatag 56062405  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 341 - 402
Target Start/End: Original strand, 7242451 - 7242512
Alignment:
Q  341 gacaaaaataaatgatactcattcgtttaaattgatgtagtgcatcaatacaatacaaattc 402  Q
    ||||||||||||||||| |||||  |||||||||||  ||| |||| ||||||| |||||||    
T  7242451 gacaaaaataaatgatattcatttatttaaattgatagagtacatcgatacaatgcaaattc 7242512  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 345 - 406
Target Start/End: Complemental strand, 22121898 - 22121837
Alignment:
Q  345 aaaataaatgatactcattcgtttaaattgatgtagtgcatcaatacaatacaaattcaaag 406  Q
    |||||||| |||| ||| || ||||| |||||  ||| ||||||||||||||||||||||||    
T  22121898 aaaataaacgatattcaatcatttaatttgatagagtacatcaatacaatacaaattcaaag 22121837  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 341 - 394
Target Start/End: Original strand, 30416292 - 30416345
Alignment:
Q  341 gacaaaaataaatgatactcattcgtttaaattgatgtagtgcatcaatacaat 394  Q
    ||||||||||||||||| |||||| |||||||||||  ||| |||| |||||||    
T  30416292 gacaaaaataaatgatattcattcatttaaattgatagagtacatcgatacaat 30416345  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 344 - 416
Target Start/End: Complemental strand, 7060781 - 7060709
Alignment:
Q  344 aaaaataaatgatactcattcgtttaaattgatgtagtgcatcaatacaatacaaattcaaagtcgctaaaaa 416  Q
    ||||||||| |||| |||||| || ||||||||  ||| |||  ||||||||||||| |||| ||||||||||    
T  7060781 aaaaataaacgatattcattcattcaaattgatagagtacattgatacaatacaaatccaaattcgctaaaaa 7060709  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 344 - 416
Target Start/End: Complemental strand, 50801669 - 50801597
Alignment:
Q  344 aaaaataaatgatactcattcgtttaaattgatgtagtgcatcaatacaatacaaattcaaagtcgctaaaaa 416  Q
    |||| |||| |||| |||||  || ||||||||  |||||||||||| ||||||||| |||| ||||||||||    
T  50801669 aaaagtaaacgatattcatttattcaaattgatagagtgcatcaataaaatacaaatccaaattcgctaaaaa 50801597  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 40; Significance: 0.0000000000002; HSPs: 27)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 341 - 416
Target Start/End: Original strand, 11798189 - 11798264
Alignment:
Q  341 gacaaaaataaatgatactcattcgtttaaattgatgtagtgcatcaatacaatacaaattcaaagtcgctaaaaa 416  Q
    ||||| |||||| |||| |||||| |||||||||||  ||| |||| ||||||| |||||||||||||||||||||    
T  11798189 gacaacaataaacgatattcattcatttaaattgatagagtacatcgatacaattcaaattcaaagtcgctaaaaa 11798264  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 342 - 416
Target Start/End: Original strand, 18089064 - 18089138
Alignment:
Q  342 acaaaaataaatgatactcattcgtttaaattgatgtagtgcatcaatacaatacaaattcaaagtcgctaaaaa 416  Q
    ||||||||||| |||| |||||| || |||||||| |||| |||| ||||||||||||| |||| ||||||||||    
T  18089064 acaaaaataaacgatattcattcattcaaattgatatagtacatcgatacaatacaaatccaaattcgctaaaaa 18089138  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 341 - 417
Target Start/End: Complemental strand, 19904959 - 19904883
Alignment:
Q  341 gacaaaaataaatgatactcattcgtttaaattgatgtagtgcatcaatacaatacaaattcaaagtcgctaaaaaa 417  Q
    ||||||||||| | ||| |||||| ||||||||||| |||| |||| ||| |||||||||||||| | |||||||||    
T  19904959 gacaaaaataattaatattcattcatttaaattgatatagtacatcgatataatacaaattcaaaattgctaaaaaa 19904883  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 344 - 416
Target Start/End: Original strand, 34962649 - 34962721
Alignment:
Q  344 aaaaataaatgatactcattcgtttaaattgatgtagtgcatcaatacaatacaaattcaaagtcgctaaaaa 416  Q
    |||||||||||||| |||||| || ||||||||  ||| ||| |||||||||||||| |||| ||||||||||    
T  34962649 aaaaataaatgatattcattcattcaaattgatagagtacataaatacaatacaaatccaaattcgctaaaaa 34962721  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 341 - 416
Target Start/End: Original strand, 9689636 - 9689711
Alignment:
Q  341 gacaaaaataaatgatactcattcgtttaaattgatgtagtgcatcaatacaatacaaattcaaagtcgctaaaaa 416  Q
    |||||||||||| ||||  ||||| |||||||||||  ||| |||| ||| |||||||||||||| ||||||||||    
T  9689636 gacaaaaataaacgatatacattcatttaaattgatagagtacatcgatataatacaaattcaaattcgctaaaaa 9689711  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 341 - 416
Target Start/End: Complemental strand, 25068311 - 25068236
Alignment:
Q  341 gacaaaaataaatgatactcattcgtttaaattgatgtagtgcatcaatacaatacaaattcaaagtcgctaaaaa 416  Q
    |||||||||||| |||| |||||| || ||||||||  ||| |||| ||||||||||||| |||| ||||||||||    
T  25068311 gacaaaaataaacgatattcattcattcaaattgatagagtacatcgatacaatacaaatccaaattcgctaaaaa 25068236  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 341 - 416
Target Start/End: Complemental strand, 27096159 - 27096084
Alignment:
Q  341 gacaaaaataaatgatactcattcgtttaaattgatgtagtgcatcaatacaatacaaattcaaagtcgctaaaaa 416  Q
    |||||||||||| |||| |||||| || ||||||||| ||| |||  |||||||||||||||||| || |||||||    
T  27096159 gacaaaaataaacgatattcattcattcaaattgatggagtacatagatacaatacaaattcaaattcactaaaaa 27096084  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 341 - 416
Target Start/End: Original strand, 38384117 - 38384192
Alignment:
Q  341 gacaaaaataaatgatactcattcgtttaaattgatgtagtgcatcaatacaatacaaattcaaagtcgctaaaaa 416  Q
    |||||||||||| |||| |||||| || ||||||||  ||  |||| |||||||||||||||||| ||||||||||    
T  38384117 gacaaaaataaacgatattcattcattcaaattgataaagcacatcgatacaatacaaattcaaattcgctaaaaa 38384192  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 341 - 416
Target Start/End: Complemental strand, 43696338 - 43696263
Alignment:
Q  341 gacaaaaataaatgatactcattcgtttaaattgatgtagtgcatcaatacaatacaaattcaaagtcgctaaaaa 416  Q
    |||||||||||| |||| |||||| || ||||||||  ||| ||||||||||||||||||  ||| ||||||||||    
T  43696338 gacaaaaataaacgatattcattcattcaaattgatagagtacatcaatacaatacaaatctaaattcgctaaaaa 43696263  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 342 - 416
Target Start/End: Original strand, 13548571 - 13548645
Alignment:
Q  342 acaaaaataaatgatactcattcgtttaaattgatgtagtgcatcaatacaatacaaattcaaagtcgctaaaaa 416  Q
    ||||||||||| |||| |||||| ||||||||||| |||| |||| ||||||||| |||| ||| | ||||||||    
T  13548571 acaaaaataaacgatattcattcatttaaattgatatagtacatcgatacaatacgaatttaaaattgctaaaaa 13548645  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 341 - 403
Target Start/End: Complemental strand, 15920323 - 15920261
Alignment:
Q  341 gacaaaaataaatgatactcattcgtttaaattgatgtagtgcatcaatacaatacaaattca 403  Q
    ||||||||||||||||| |||||| || ||||||||  ||| |||| ||||||||||||||||    
T  15920323 gacaaaaataaatgatattcattcattcaaattgatagagtacatcgatacaatacaaattca 15920261  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 342 - 416
Target Start/End: Original strand, 20560785 - 20560859
Alignment:
Q  342 acaaaaataaatgatactcattcgtttaaattgatgtagtgcatcaatacaatacaaattcaaagtcgctaaaaa 416  Q
    ||||||||||| |||| |||||| || ||||||||  ||| |||| ||||||||||||| |||| ||||||||||    
T  20560785 acaaaaataaacgatattcattcattcaaattgatagagtacatcgatacaatacaaatccaaattcgctaaaaa 20560859  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 342 - 416
Target Start/End: Complemental strand, 29543262 - 29543188
Alignment:
Q  342 acaaaaataaatgatactcattcgtttaaattgatgtagtgcatcaatacaatacaaattcaaagtcgctaaaaa 416  Q
    ||||||||||| |||| |||||| || ||||||||  ||| |||| |||||||||||||||||| | ||||||||    
T  29543262 acaaaaataaacgatattcattcattcaaattgatagagtacatcgatacaatacaaattcaaatttgctaaaaa 29543188  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 342 - 416
Target Start/End: Complemental strand, 33012517 - 33012443
Alignment:
Q  342 acaaaaataaatgatactcattcgtttaaattgatgtagtgcatcaatacaatacaaattcaaagtcgctaaaaa 416  Q
    ||||||||||| |||| |||||| || ||||||||  ||| |||| |||||||||||||| ||| ||||||||||    
T  33012517 acaaaaataaacgatattcattcattcaaattgatagagtacatcgatacaatacaaatttaaattcgctaaaaa 33012443  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 341 - 402
Target Start/End: Original strand, 11550331 - 11550392
Alignment:
Q  341 gacaaaaataaatgatactcattcgtttaaattgatgtagtgcatcaatacaatacaaattc 402  Q
    ||||||||||||||||| |||||| || ||||||||  ||| |||||||||||| |||||||    
T  11550331 gacaaaaataaatgatattcattcattcaaattgatagagtacatcaatacaatgcaaattc 11550392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 341 - 421
Target Start/End: Original strand, 7581758 - 7581838
Alignment:
Q  341 gacaaaaataaatgatactcattcgtttaaattgatgtagtgcatcaatacaatacaaattcaaagtcgctaaaaaatgat 421  Q
    ||||||||||||||||| | |||| || ||||||||  |||  ||| |||||| ||||||| |||||| ||||||||||||    
T  7581758 gacaaaaataaatgatatttattcattcaaattgataaagtatatcgatacaaaacaaattaaaagtctctaaaaaatgat 7581838  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 344 - 416
Target Start/End: Complemental strand, 12705153 - 12705081
Alignment:
Q  344 aaaaataaatgatactcattcgtttaaattgatgtagtgcatcaatacaatacaaattcaaagtcgctaaaaa 416  Q
    ||||||||| |||| |||||| || ||||||||  ||| |||| ||||||||||||| |||| ||||||||||    
T  12705153 aaaaataaaggatattcattcattcaaattgatagagtacatcgatacaatacaaatccaaattcgctaaaaa 12705081  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 341 - 416
Target Start/End: Complemental strand, 4703601 - 4703526
Alignment:
Q  341 gacaaaaataaatgatactcattcgtttaaattgatgtagtgcatcaatacaatacaaattcaaagtcgctaaaaa 416  Q
    |||||||||||| |||| |||||| |  |||||||   ||| |||| ||||||||||||||||||||||| |||||    
T  4703601 gacaaaaataaacgatattcattcatccaaattgacagagtacatcgatacaatacaaattcaaagtcgccaaaaa 4703526  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 341 - 416
Target Start/End: Complemental strand, 4739799 - 4739724
Alignment:
Q  341 gacaaaaataaatgatactcattcgtttaaattgatgtagtgcatcaatacaatacaaattcaaagtcgctaaaaa 416  Q
    ||||||| |||| |||| |||||| || ||||||||  ||| |||| ||||||||||||| |||| ||||||||||    
T  4739799 gacaaaagtaaacgatattcattcattcaaattgatagagtacatcgatacaatacaaatccaaattcgctaaaaa 4739724  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 341 - 416
Target Start/End: Original strand, 11937517 - 11937592
Alignment:
Q  341 gacaaaaataaatgatactcattcgtttaaattgatgtagtgcatcaatacaatacaaattcaaagtcgctaaaaa 416  Q
    ||||||||||||||||| |||||  |  ||||||||  ||| |||| |||||||||||||||||  ||||||||||    
T  11937517 gacaaaaataaatgatattcatttatccaaattgatagagtacatcgatacaatacaaattcaatttcgctaaaaa 11937592  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 341 - 416
Target Start/End: Original strand, 12890768 - 12890843
Alignment:
Q  341 gacaaaaataaatgatactcattcgtttaaattgatgtagtgcatcaatacaatacaaattcaaagtcgctaaaaa 416  Q
    |||||||||||| |||| |||||  || ||||||||  ||| |||| ||||||||||||| |||| ||||||||||    
T  12890768 gacaaaaataaacgatattcattaattcaaattgatagagtacatcgatacaatacaaatccaaattcgctaaaaa 12890843  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 341 - 416
Target Start/End: Original strand, 13878660 - 13878735
Alignment:
Q  341 gacaaaaataaatgatactcattcgtttaaattgatgtagtgcatcaatacaatacaaattcaaagtcgctaaaaa 416  Q
    |||||||||||| |||| |||||| || ||||||||  ||| |||| |||||||||||||  ||| ||||||||||    
T  13878660 gacaaaaataaacgatattcattcattcaaattgatagagtacatcgatacaatacaaatcaaaattcgctaaaaa 13878735  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 341 - 416
Target Start/End: Original strand, 14018785 - 14018860
Alignment:
Q  341 gacaaaaataaatgatactcattcgtttaaattgatgtagtgcatcaatacaatacaaattcaaagtcgctaaaaa 416  Q
    |||||||||||| |||| |||||| || ||||||||  ||| |||| |||||||||||||  ||| ||||||||||    
T  14018785 gacaaaaataaacgatattcattcattcaaattgatagagtacatcgatacaatacaaatcaaaattcgctaaaaa 14018860  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 342 - 416
Target Start/End: Original strand, 13740306 - 13740380
Alignment:
Q  342 acaaaaataaatgatactcattcgtttaaattgatgtagtgcatcaatacaatacaaattcaaagtcgctaaaaa 416  Q
    ||||||| ||| |||| || ||| || ||||||||  ||| |||||||||||||||||| |||| ||||||||||    
T  13740306 acaaaaacaaacgatattctttcattcaaattgataaagtacatcaatacaatacaaatccaaattcgctaaaaa 13740380  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 342 - 416
Target Start/End: Original strand, 28230749 - 28230823
Alignment:
Q  342 acaaaaataaatgatactcattcgtttaaattgatgtagtgcatcaatacaatacaaattcaaagtcgctaaaaa 416  Q
    ||||||||||| |||| || ||| || |||||| |  ||| |||| |||||||||||||||||| ||||||||||    
T  28230749 acaaaaataaacgatattcgttcattcaaattgttagagtacatcgatacaatacaaattcaaattcgctaaaaa 28230823  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 342 - 416
Target Start/End: Complemental strand, 35333974 - 35333900
Alignment:
Q  342 acaaaaataaatgatactcattcgtttaaattgatgtagtgcatcaatacaatacaaattcaaagtcgctaaaaa 416  Q
    ||||||||||| |||| |||||| || ||||||||  ||| |||| ||||||||||||| |||| ||| ||||||    
T  35333974 acaaaaataaacgatattcattcattcaaattgatagagtacatcgatacaatacaaatccaaattcgttaaaaa 35333900  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 383 - 416
Target Start/End: Original strand, 20607147 - 20607180
Alignment:
Q  383 catcaatacaatacaaattcaaagtcgctaaaaa 416  Q
    |||| |||||||||||||||||||||||||||||    
T  20607147 catcgatacaatacaaattcaaagtcgctaaaaa 20607180  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0007 (Bit Score: 38; Significance: 0.000000000003; HSPs: 1)
Name: scaffold0007
Description:

Target: scaffold0007; HSP #1
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 344 - 409
Target Start/End: Original strand, 201731 - 201796
Alignment:
Q  344 aaaaataaatgatactcattcgtttaaattgatgtagtgcatcaatacaatacaaattcaaagtcg 409  Q
    ||||||||||||||  ||||| |||||||||||  |||  ||||||||||||||||||||||||||    
T  201731 aaaaataaatgatatacattcatttaaattgatagagtaaatcaatacaatacaaattcaaagtcg 201796  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 37; Significance: 0.00000000001; HSPs: 21)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 341 - 417
Target Start/End: Original strand, 24790829 - 24790905
Alignment:
Q  341 gacaaaaataaatgatactcattcgtttaaattgatgtagtgcatcaatacaatacaaattcaaagtcgctaaaaaa 417  Q
    |||||||||||| |||| |||||| || ||||||||  ||| |||| ||||||||||||| |||| |||||||||||    
T  24790829 gacaaaaataaacgatattcattcattcaaattgatagagtacatcgatacaatacaaatccaaattcgctaaaaaa 24790905  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 341 - 416
Target Start/End: Original strand, 2234129 - 2234204
Alignment:
Q  341 gacaaaaataaatgatactcattcgtttaaattgatgtagtgcatcaatacaatacaaattcaaagtcgctaaaaa 416  Q
    |||||||||||| |||| |||||| || ||||||||  ||| |||| ||| |||||||||||||| ||||||||||    
T  2234129 gacaaaaataaacgatattcattcattcaaattgatagagtacatcgatataatacaaattcaaattcgctaaaaa 2234204  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 345 - 416
Target Start/End: Original strand, 28296778 - 28296849
Alignment:
Q  345 aaaataaatgatactcattcgtttaaattgatgtagtgcatcaatacaatacaaattcaaagtcgctaaaaa 416  Q
    ||||||||||||| |||||| || ||||||||  ||| |||| ||||||||||||| |||| ||||||||||    
T  28296778 aaaataaatgatattcattcattcaaattgatagagtacatcgatacaatacaaatccaaattcgctaaaaa 28296849  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 344 - 416
Target Start/End: Complemental strand, 2968982 - 2968910
Alignment:
Q  344 aaaaataaatgatactcattcgtttaaattgatgtagtgcatcaatacaatacaaattcaaagtcgctaaaaa 416  Q
    ||||||||| |||| |||||| || ||||||||  ||| |||| |||||||||| ||||||||||| ||||||    
T  2968982 aaaaataaacgatattcattcattcaaattgatagagtacatcgatacaatacatattcaaagtcgttaaaaa 2968910  T

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Target: chr8; HSP #5
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 344 - 416
Target Start/End: Original strand, 13575871 - 13575943
Alignment:
Q  344 aaaaataaatgatactcattcgtttaaattgatgtagtgcatcaatacaatacaaattcaaagtcgctaaaaa 416  Q
    ||||||| | |||| |||||| |||||||||||  ||| |||| |||||||||| || |||||||||||||||    
T  13575871 aaaaatagacgatattcattcatttaaattgatagagtacatcgatacaatacatatccaaagtcgctaaaaa 13575943  T

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Target: chr8; HSP #6
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 341 - 416
Target Start/End: Complemental strand, 9502038 - 9501963
Alignment:
Q  341 gacaaaaataaatgatactcattcgtttaaattgatgtagtgcatcaatacaatacaaattcaaagtcgctaaaaa 416  Q
    ||||||| |||| |||| |||||| || ||||||||  ||| |||| |||||||||||||||||  ||||||||||    
T  9502038 gacaaaagtaaacgatattcattcattcaaattgatagagtacatcgatacaatacaaattcaagttcgctaaaaa 9501963  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 341 - 416
Target Start/End: Complemental strand, 11162356 - 11162281
Alignment:
Q  341 gacaaaaataaatgatactcattcgtttaaattgatgtagtgcatcaatacaatacaaattcaaagtcgctaaaaa 416  Q
    ||||||| || | |||| |||||| || ||||||||| ||| |||| ||||||||||||| |||| ||||||||||    
T  11162356 gacaaaagtatacgatattcattcattcaaattgatggagtacatcgatacaatacaaatccaaattcgctaaaaa 11162281  T

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Target: chr8; HSP #8
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 344 - 403
Target Start/End: Complemental strand, 13977856 - 13977797
Alignment:
Q  344 aaaaataaatgatactcattcgtttaaattgatgtagtgcatcaatacaatacaaattca 403  Q
    |||||||||||||| ||||||||| ||||||||  ||| |||| ||||||| ||||||||    
T  13977856 aaaaataaatgatattcattcgttcaaattgatagagtacatcgatacaatgcaaattca 13977797  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 342 - 416
Target Start/End: Original strand, 15286692 - 15286767
Alignment:
Q  342 acaaaaataaatgatactcattcgtttaaattgatgtagtgcatcaatacaatac-aaattcaaagtcgctaaaaa 416  Q
    |||||||||||||||| |||||| |||||||||||  ||| |||  ||||||||| |||| |||| ||||||||||    
T  15286692 acaaaaataaatgatattcattcatttaaattgatagagtacatttatacaatacaaaatccaaattcgctaaaaa 15286767  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 342 - 416
Target Start/End: Original strand, 15467061 - 15467136
Alignment:
Q  342 acaaaaataaatgatactcattcgtttaaattgatgtagtgcatcaatacaatac-aaattcaaagtcgctaaaaa 416  Q
    |||||||||||||||| |||||| |||||||||||  ||| |||  ||||||||| |||| |||| ||||||||||    
T  15467061 acaaaaataaatgatattcattcatttaaattgatagagtacatttatacaatacaaaatccaaattcgctaaaaa 15467136  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 341 - 416
Target Start/End: Complemental strand, 31202918 - 31202843
Alignment:
Q  341 gacaaaaataaatgatactcattcgtttaaattgatgtagtgcatcaatacaatacaaattcaaagtcgctaaaaa 416  Q
    |||||||||||| |||| |||||| || ||||||||  ||| |||| ||| ||||||||| |||| ||||||||||    
T  31202918 gacaaaaataaacgatattcattcattcaaattgatagagtacatcgatataatacaaatccaaattcgctaaaaa 31202843  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 341 - 416
Target Start/End: Original strand, 39067349 - 39067424
Alignment:
Q  341 gacaaaaataaatgatactcattcgtttaaattgatgtagtgcatcaatacaatacaaattcaaagtcgctaaaaa 416  Q
    |||||||||||| |||| |||||| |||||||||||  |||  ||| |||| ||||||||| ||| ||||||||||    
T  39067349 gacaaaaataaacgatattcattcttttaaattgatagagtatatcgatactatacaaatttaaattcgctaaaaa 39067424  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 344 - 403
Target Start/End: Complemental strand, 41362200 - 41362141
Alignment:
Q  344 aaaaataaatgatactcattcgtttaaattgatgtagtgcatcaatacaatacaaattca 403  Q
    ||||||||| |||| |||||| || ||||||||  ||| |||||||||||||||||||||    
T  41362200 aaaaataaacgatattcattcattcaaattgatagagtacatcaatacaatacaaattca 41362141  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 342 - 416
Target Start/End: Complemental strand, 37613105 - 37613031
Alignment:
Q  342 acaaaaataaatgatactcattcgtttaaattgatgtagtgcatcaatacaatacaaattcaaagtcgctaaaaa 416  Q
    ||||||||||| |||| |||||| || ||||||||  |||  ||| |||||||||||||||||| ||| ||||||    
T  37613105 acaaaaataaacgatattcattcattcaaattgatagagtatatcgatacaatacaaattcaaattcgttaaaaa 37613031  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 274 - 303
Target Start/End: Original strand, 14918354 - 14918383
Alignment:
Q  274 ataaataatattcattcgtttaaattgata 303  Q
    ||||||||||||||||||||||||||||||    
T  14918354 ataaataatattcattcgtttaaattgata 14918383  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 341 - 402
Target Start/End: Complemental strand, 41996992 - 41996931
Alignment:
Q  341 gacaaaaataaatgatactcattcgtttaaattgatgtagtgcatcaatacaatacaaattc 402  Q
    ||||||||||||||||| |||||| |||||||||||  ||| |||| ||| ||| |||||||    
T  41996992 gacaaaaataaatgatattcattcatttaaattgatcgagtacatcgatataatgcaaattc 41996931  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 342 - 402
Target Start/End: Complemental strand, 5990061 - 5990001
Alignment:
Q  342 acaaaaataaatgatactcattcgtttaaattgatgtagtgcatcaatacaatacaaattc 402  Q
    |||||||||||||| | |||||| |||||||| || |||| |||||||| ||| |||||||    
T  5990061 acaaaaataaatgacattcattcatttaaattaatatagtacatcaatagaatgcaaattc 5990001  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 344 - 400
Target Start/End: Original strand, 9799679 - 9799735
Alignment:
Q  344 aaaaataaatgatactcattcgtttaaattgatgtagtgcatcaatacaatacaaat 400  Q
    |||||||||||||| |||||| || ||||||||  ||| |||||||||||| |||||    
T  9799679 aaaaataaatgatattcattcattcaaattgatagagtacatcaatacaatgcaaat 9799735  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 344 - 416
Target Start/End: Complemental strand, 9802123 - 9802051
Alignment:
Q  344 aaaaataaatgatactcattcgtttaaattgatgtagtgcatcaatacaatacaaattcaaagtcgctaaaaa 416  Q
    |||||| ||||||| | ||||||| |||||| |   || |||| ||||||||||||||||||||| |||||||    
T  9802123 aaaaatgaatgatatttattcgttcaaattggtagggtacatcgatacaatacaaattcaaagtcactaaaaa 9802051  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 341 - 401
Target Start/End: Original strand, 13570426 - 13570486
Alignment:
Q  341 gacaaaaataaatgatactcattcgtttaaattgatgtagtgcatcaatacaatacaaatt 401  Q
    |||||||||||| |||| |||||| |||||||||||  |||  ||| ||||||||||||||    
T  13570426 gacaaaaataaacgatattcattcatttaaattgatagagtatatcgatacaatacaaatt 13570486  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 360 - 416
Target Start/End: Original strand, 31407429 - 31407485
Alignment:
Q  360 cattcgtttaaattgatgtagtgcatcaatacaatacaaattcaaagtcgctaaaaa 416  Q
    ||||| || |||||||| |||| |||  |||||||||||||||||| ||||||||||    
T  31407429 cattcattcaaattgatatagtacattgatacaatacaaattcaaattcgctaaaaa 31407485  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0056 (Bit Score: 36; Significance: 0.00000000005; HSPs: 1)
Name: scaffold0056
Description:

Target: scaffold0056; HSP #1
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 341 - 416
Target Start/End: Complemental strand, 74634 - 74559
Alignment:
Q  341 gacaaaaataaatgatactcattcgtttaaattgatgtagtgcatcaatacaatacaaattcaaagtcgctaaaaa 416  Q
    |||||||||||| |||| |||||  |||||||||||  ||| |||| ||||||||||||| |||| ||||||||||    
T  74634 gacaaaaataaacgatattcatttatttaaattgatagagtacatcgatacaatacaaatccaaattcgctaaaaa 74559  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0321 (Bit Score: 33; Significance: 0.000000003; HSPs: 1)
Name: scaffold0321
Description:

Target: scaffold0321; HSP #1
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 341 - 416
Target Start/End: Original strand, 6780 - 6856
Alignment:
Q  341 gacaaaaataaatgatactcattcgttt-aaattgatgtagtgcatcaatacaatacaaattcaaagtcgctaaaaa 416  Q
    |||||| ||||| |||| |||||| ||| ||||||||  ||| |||| |||||||||||||||||| ||||||||||    
T  6780 gacaaatataaacgatattcattcatttcaaattgatagagtacatcgatacaatacaaattcaaattcgctaaaaa 6856  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0536 (Bit Score: 32; Significance: 0.00000001; HSPs: 1)
Name: scaffold0536
Description:

Target: scaffold0536; HSP #1
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 341 - 416
Target Start/End: Complemental strand, 3365 - 3290
Alignment:
Q  341 gacaaaaataaatgatactcattcgtttaaattgatgtagtgcatcaatacaatacaaattcaaagtcgctaaaaa 416  Q
    |||||||||||| |||| |||||| || ||||||||  ||| |||| |||||||| ||||| ||| ||||||||||    
T  3365 gacaaaaataaacgatattcattcattcaaattgatagagtacatcgatacaatataaatttaaattcgctaaaaa 3290  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0155 (Bit Score: 32; Significance: 0.00000001; HSPs: 1)
Name: scaffold0155
Description:

Target: scaffold0155; HSP #1
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 341 - 416
Target Start/End: Complemental strand, 35545 - 35470
Alignment:
Q  341 gacaaaaataaatgatactcattcgtttaaattgatgtagtgcatcaatacaatacaaattcaaagtcgctaaaaa 416  Q
    |||||||||||| |||| |||||| || ||||||||  ||| |||| ||||||||||||| |||| | ||||||||    
T  35545 gacaaaaataaacgatattcattcattcaaattgatagagtacatcgatacaatacaaatccaaatttgctaaaaa 35470  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0090 (Bit Score: 31; Significance: 0.00000005; HSPs: 1)
Name: scaffold0090
Description:

Target: scaffold0090; HSP #1
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 342 - 416
Target Start/End: Original strand, 11220 - 11294
Alignment:
Q  342 acaaaaataaatgatactcattcgtttaaattgatgtagtgcatcaatacaatacaaattcaaagtcgctaaaaa 416  Q
    |||||||||||||||| | |||| |||||||||||  |||  ||| |||||||| ||||| ||| ||||||||||    
T  11220 acaaaaataaatgatattaattcatttaaattgatagagtatatcgatacaataaaaatttaaaatcgctaaaaa 11294  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0001 (Bit Score: 31; Significance: 0.00000005; HSPs: 1)
Name: scaffold0001
Description:

Target: scaffold0001; HSP #1
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 342 - 416
Target Start/End: Original strand, 403900 - 403974
Alignment:
Q  342 acaaaaataaatgatactcattcgtttaaattgatgtagtgcatcaatacaatacaaattcaaagtcgctaaaaa 416  Q
    ||||||||||| |||| |||||| || ||||| ||  ||| |||| |||||||||||||||||| ||||| ||||    
T  403900 acaaaaataaacgatattcattcattcaaattaatagagtacatcgatacaatacaaattcaaattcgctgaaaa 403974  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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