View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF10189_high_8 (Length: 339)

Name: NF10189_high_8
Description: NF10189
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF10189_high_8
NF10189_high_8
[»] chr1 (43 HSPs)
chr1 (1-324)||(5572647-5572977)
chr1 (132-300)||(35772075-35772242)
chr1 (132-300)||(26176954-26177121)
chr1 (149-293)||(4098292-4098434)
chr1 (172-300)||(30369881-30370007)
chr1 (132-295)||(35892107-35892269)
chr1 (132-302)||(27413391-27413560)
chr1 (149-292)||(2859516-2859657)
chr1 (160-300)||(33156779-33156918)
chr1 (132-301)||(38668170-38668338)
chr1 (132-278)||(38733219-38733360)
chr1 (131-300)||(51460312-51460480)
chr1 (132-300)||(4112877-4113044)
chr1 (133-295)||(25145592-25145753)
chr1 (134-300)||(31496244-31496409)
chr1 (250-302)||(51589850-51589902)
chr1 (136-241)||(369734-369841)
chr1 (249-300)||(3169812-3169863)
chr1 (149-300)||(12376562-12376711)
chr1 (250-300)||(29265999-29266049)
chr1 (150-300)||(39348242-39348390)
chr1 (132-240)||(25713262-25713371)
chr1 (199-279)||(32783220-32783298)
chr1 (131-237)||(39100453-39100560)
chr1 (132-205)||(8870795-8870869)
chr1 (250-300)||(51589272-51589322)
chr1 (247-300)||(8870895-8870948)
chr1 (149-226)||(12325421-12325497)
chr1 (132-240)||(17412436-17412545)
chr1 (133-240)||(7307825-7307933)
chr1 (132-226)||(16163051-16163145)
chr1 (261-300)||(17452678-17452717)
chr1 (255-298)||(51460043-51460086)
chr1 (253-300)||(51589038-51589085)
chr1 (250-300)||(17452816-17452866)
chr1 (263-301)||(42586440-42586478)
chr1 (247-300)||(9499291-9499344)
chr1 (263-300)||(25255357-25255394)
chr1 (263-300)||(26177189-26177226)
chr1 (263-300)||(35772310-35772347)
chr1 (263-300)||(40079198-40079235)
chr1 (263-295)||(20208230-20208262)
chr1 (263-295)||(20208529-20208561)
[»] chr4 (43 HSPs)
chr4 (132-300)||(35788705-35788872)
chr4 (134-300)||(35796850-35797015)
chr4 (132-300)||(22231179-22231346)
chr4 (133-281)||(28245633-28245780)
chr4 (135-300)||(50543439-50543605)
chr4 (157-292)||(35819025-35819158)
chr4 (132-300)||(40717312-40717479)
chr4 (133-300)||(6218250-6218416)
chr4 (132-240)||(27634187-27634296)
chr4 (250-300)||(53814917-53814967)
chr4 (247-300)||(12869248-12869301)
chr4 (247-300)||(17111609-17111662)
chr4 (132-226)||(5398581-5398676)
chr4 (250-300)||(14783175-14783225)
chr4 (250-300)||(25052898-25052948)
chr4 (157-300)||(52559613-52559756)
chr4 (132-240)||(5398317-5398425)
chr4 (141-240)||(12005587-12005689)
chr4 (250-302)||(53828511-53828563)
chr4 (132-222)||(6778549-6778640)
chr4 (250-300)||(1518210-1518260)
chr4 (250-292)||(9685452-9685494)
chr4 (250-300)||(21498400-21498450)
chr4 (209-307)||(26030351-26030448)
chr4 (177-227)||(26549541-26549591)
chr4 (250-300)||(50543318-50543368)
chr4 (263-300)||(9685678-9685715)
chr4 (160-216)||(1215883-1215939)
chr4 (149-300)||(4645688-4645837)
chr4 (250-302)||(52827466-52827518)
chr4 (263-302)||(21685042-21685081)
chr4 (245-292)||(52827408-52827455)
chr4 (263-302)||(53559291-53559330)
chr4 (263-300)||(21498841-21498878)
chr4 (263-300)||(22845448-22845485)
chr4 (263-300)||(22863520-22863557)
chr4 (263-300)||(35788940-35788977)
chr4 (250-295)||(40716609-40716654)
chr4 (263-308)||(41187933-41187978)
chr4 (263-300)||(54054806-54054843)
chr4 (250-302)||(4464339-4464391)
chr4 (150-226)||(13495581-13495657)
chr4 (157-300)||(43743035-43743171)
[»] chr3 (38 HSPs)
chr3 (132-300)||(4155370-4155537)
chr3 (149-300)||(13574809-13574959)
chr3 (136-300)||(20327724-20327887)
chr3 (132-300)||(35038300-35038466)
chr3 (133-300)||(16239637-16239804)
chr3 (132-300)||(31317274-31317444)
chr3 (160-300)||(20303285-20303423)
chr3 (171-300)||(8142558-8142685)
chr3 (136-237)||(20303174-20303276)
chr3 (247-300)||(16926934-16926987)
chr3 (132-226)||(34992724-34992819)
chr3 (250-300)||(1723064-1723114)
chr3 (250-300)||(11589831-11589881)
chr3 (250-296)||(21833398-21833444)
chr3 (131-189)||(29215694-29215752)
chr3 (250-300)||(54368562-54368612)
chr3 (250-300)||(54567938-54567988)
chr3 (251-300)||(9273007-9273056)
chr3 (132-216)||(39683374-39683459)
chr3 (132-240)||(19954324-19954432)
chr3 (247-302)||(17001406-17001461)
chr3 (263-300)||(39620372-39620409)
chr3 (250-294)||(17638286-17638330)
chr3 (132-227)||(52724092-52724188)
chr3 (253-300)||(12930119-12930166)
chr3 (247-293)||(27783111-27783157)
chr3 (147-205)||(29575792-29575850)
chr3 (250-300)||(45138959-45139009)
chr3 (259-300)||(20327611-20327652)
chr3 (251-292)||(22729154-22729195)
chr3 (263-300)||(24866243-24866280)
chr3 (263-300)||(35038195-35038232)
chr3 (250-291)||(39620147-39620188)
chr3 (263-300)||(47702410-47702447)
chr3 (263-300)||(50052540-50052577)
chr3 (264-300)||(13574686-13574722)
chr3 (250-302)||(15019504-15019556)
chr3 (150-300)||(49629651-49629800)
[»] chr2 (39 HSPs)
chr2 (132-300)||(15124654-15124821)
chr2 (133-290)||(40149110-40149264)
chr2 (132-300)||(40379315-40379482)
chr2 (132-300)||(16533358-16533525)
chr2 (132-300)||(5711545-5711713)
chr2 (132-300)||(2029815-2029982)
chr2 (132-300)||(16419313-16419480)
chr2 (134-300)||(14466283-14466448)
chr2 (132-300)||(93228-93392)
chr2 (132-300)||(33606160-33606327)
chr2 (132-240)||(37812374-37812483)
chr2 (195-300)||(93562-93665)
chr2 (247-300)||(21591828-21591881)
chr2 (133-240)||(44404033-44404142)
chr2 (133-240)||(19110347-19110455)
chr2 (249-300)||(10571016-10571067)
chr2 (250-300)||(2324286-2324336)
chr2 (250-300)||(5509125-5509175)
chr2 (133-226)||(17525206-17525300)
chr2 (250-300)||(28407781-28407831)
chr2 (133-300)||(36352033-36352197)
chr2 (255-300)||(10523065-10523110)
chr2 (247-300)||(27897591-27897644)
chr2 (250-302)||(24395907-24395959)
chr2 (261-300)||(5594286-5594325)
chr2 (250-293)||(27036403-27036446)
chr2 (261-300)||(30701124-30701163)
chr2 (158-240)||(18607142-18607224)
chr2 (250-300)||(21383658-21383708)
chr2 (250-300)||(29718374-29718424)
chr2 (149-292)||(33381077-33381221)
chr2 (263-300)||(5711440-5711477)
chr2 (263-300)||(8424934-8424971)
chr2 (263-300)||(16419548-16419585)
chr2 (263-300)||(17719612-17719649)
chr2 (247-300)||(17854914-17854967)
chr2 (263-300)||(19191611-19191648)
chr2 (263-300)||(40379210-40379247)
chr2 (263-303)||(13486377-13486417)
[»] chr5 (44 HSPs)
chr5 (132-300)||(41666863-41667031)
chr5 (136-300)||(18333575-18333737)
chr5 (137-302)||(24531643-24531807)
chr5 (132-300)||(15480368-15480535)
chr5 (132-300)||(24346607-24346775)
chr5 (133-287)||(95373-95526)
chr5 (132-300)||(24269976-24270143)
chr5 (132-300)||(32908824-32908990)
chr5 (132-300)||(9368641-9368808)
chr5 (132-240)||(13700696-13700805)
chr5 (134-300)||(25258174-25258339)
chr5 (134-300)||(25321964-25322129)
chr5 (132-295)||(43117698-43117859)
chr5 (134-295)||(17150341-17150501)
chr5 (132-292)||(6919300-6919459)
chr5 (250-300)||(8098363-8098413)
chr5 (209-300)||(2063683-2063772)
chr5 (132-216)||(17015982-17016066)
chr5 (171-300)||(6413568-6413695)
chr5 (133-226)||(15590056-15590150)
chr5 (250-300)||(21209909-21209959)
chr5 (250-292)||(24487633-24487675)
chr5 (132-300)||(24528586-24528753)
chr5 (137-225)||(38731714-38731803)
chr5 (132-198)||(8081220-8081287)
chr5 (135-225)||(20510751-20510841)
chr5 (132-222)||(33337344-33337435)
chr5 (245-295)||(1028381-1028431)
chr5 (250-300)||(8081101-8081151)
chr5 (250-291)||(17016385-17016426)
chr5 (254-293)||(13296725-13296764)
chr5 (132-198)||(18885373-18885440)
chr5 (253-308)||(20225079-20225134)
chr5 (250-300)||(1564555-1564605)
chr5 (250-308)||(26137333-26137391)
chr5 (132-205)||(30770155-30770229)
chr5 (132-188)||(17352540-17352597)
chr5 (263-300)||(21209709-21209746)
chr5 (263-300)||(25258095-25258132)
chr5 (263-300)||(25321885-25321922)
chr5 (263-300)||(27132994-27133031)
chr5 (263-300)||(28510137-28510174)
chr5 (263-300)||(41666758-41666795)
chr5 (247-295)||(6415594-6415642)
[»] chr6 (31 HSPs)
chr6 (132-300)||(13353247-13353414)
chr6 (132-300)||(33796372-33796539)
chr6 (132-300)||(4868683-4868851)
chr6 (133-300)||(6542815-6542981)
chr6 (132-292)||(12330050-12330209)
chr6 (132-300)||(33494585-33494752)
chr6 (132-237)||(17147766-17147872)
chr6 (132-308)||(3680050-3680224)
chr6 (133-227)||(6400727-6400822)
chr6 (132-300)||(9705066-9705232)
chr6 (171-292)||(6237618-6237737)
chr6 (250-300)||(8026435-8026485)
chr6 (250-300)||(30256858-30256908)
chr6 (247-307)||(8001535-8001595)
chr6 (249-301)||(20373615-20373667)
chr6 (250-300)||(27653263-27653313)
chr6 (250-300)||(30256624-30256674)
chr6 (177-290)||(2736318-2736430)
chr6 (253-302)||(21690766-21690815)
chr6 (132-240)||(31961047-31961156)
chr6 (133-300)||(24554163-24554327)
chr6 (261-300)||(8566958-8566997)
chr6 (149-240)||(33631694-33631785)
chr6 (263-300)||(4161847-4161884)
chr6 (263-300)||(4223467-4223504)
chr6 (263-300)||(4868578-4868615)
chr6 (250-295)||(5572604-5572649)
chr6 (263-300)||(8026650-8026687)
chr6 (263-300)||(11721951-11721988)
chr6 (251-300)||(15082133-15082182)
chr6 (264-300)||(5572386-5572422)
[»] chr8 (51 HSPs)
chr8 (134-292)||(20301315-20301472)
chr8 (134-292)||(21087947-21088104)
chr8 (132-293)||(41790711-41790871)
chr8 (132-300)||(11232300-11232467)
chr8 (132-300)||(39052800-39052967)
chr8 (132-300)||(5932055-5932222)
chr8 (132-300)||(20094666-20094832)
chr8 (132-293)||(31197668-31197825)
chr8 (133-300)||(3157431-3157597)
chr8 (132-240)||(18004202-18004309)
chr8 (132-226)||(39052643-39052738)
chr8 (133-226)||(3157116-3157210)
chr8 (132-226)||(39960075-39960169)
chr8 (132-291)||(8084182-8084340)
chr8 (171-300)||(15042795-15042924)
chr8 (149-303)||(10615437-10615589)
chr8 (134-240)||(35682889-35682996)
chr8 (250-300)||(19256808-19256858)
chr8 (141-302)||(422334-422493)
chr8 (250-303)||(12317089-12317142)
chr8 (174-302)||(8716158-8716285)
chr8 (149-201)||(42049575-42049627)
chr8 (132-226)||(5675840-5675935)
chr8 (250-293)||(10884117-10884160)
chr8 (251-294)||(28213093-28213136)
chr8 (250-300)||(4828114-4828164)
chr8 (250-300)||(11232182-11232232)
chr8 (250-300)||(17469864-17469914)
chr8 (250-300)||(24532409-24532459)
chr8 (250-300)||(34842724-34842774)
chr8 (250-300)||(36917427-36917477)
chr8 (251-292)||(5590357-5590398)
chr8 (263-300)||(22638180-22638217)
chr8 (261-302)||(39743573-39743614)
chr8 (149-279)||(5675945-5676073)
chr8 (250-300)||(10615144-10615194)
chr8 (250-300)||(16050075-16050125)
chr8 (250-300)||(26208237-26208287)
chr8 (250-300)||(37001272-37001322)
chr8 (132-240)||(12688176-12688285)
chr8 (263-300)||(19256587-19256624)
chr8 (263-300)||(24075307-24075344)
chr8 (263-300)||(27205010-27205047)
chr8 (263-300)||(27205108-27205145)
chr8 (263-300)||(27205206-27205243)
chr8 (263-300)||(34653196-34653233)
chr8 (263-300)||(35682782-35682819)
chr8 (263-300)||(37001510-37001547)
chr8 (263-300)||(39960238-39960275)
chr8 (263-300)||(42846606-42846643)
chr8 (247-299)||(29005911-29005963)
[»] chr7 (35 HSPs)
chr7 (132-300)||(25620182-25620349)
chr7 (132-300)||(29469651-29469818)
chr7 (132-295)||(1596644-1596806)
chr7 (132-300)||(2404280-2404446)
chr7 (133-308)||(36277098-36277272)
chr7 (134-300)||(21861340-21861505)
chr7 (132-300)||(33834237-33834404)
chr7 (132-300)||(33996185-33996349)
chr7 (133-300)||(4506978-4507142)
chr7 (149-292)||(4886383-4886524)
chr7 (133-226)||(31892270-31892364)
chr7 (132-226)||(40746139-40746233)
chr7 (132-223)||(3519831-3519923)
chr7 (245-300)||(40121907-40121962)
chr7 (160-290)||(48661455-48661583)
chr7 (250-300)||(31257255-31257305)
chr7 (134-279)||(36993182-36993325)
chr7 (209-302)||(44874527-44874618)
chr7 (250-295)||(10882227-10882272)
chr7 (250-302)||(21821850-21821902)
chr7 (250-300)||(6782907-6782957)
chr7 (250-300)||(17202225-17202275)
chr7 (250-300)||(34027439-34027489)
chr7 (263-308)||(43085538-43085583)
chr7 (252-300)||(2544437-2544485)
chr7 (250-302)||(40746309-40746361)
chr7 (171-278)||(20305358-20305467)
chr7 (149-226)||(3519928-3520005)
chr7 (250-287)||(6001658-6001695)
chr7 (250-295)||(26239904-26239949)
chr7 (247-300)||(26562058-26562111)
chr7 (263-308)||(43075311-43075356)
chr7 (247-300)||(48243422-48243475)
chr7 (250-302)||(23796011-23796063)
chr7 (263-295)||(43688161-43688193)
[»] scaffold0692 (1 HSPs)
scaffold0692 (149-294)||(5643-5786)
[»] scaffold0519 (1 HSPs)
scaffold0519 (132-300)||(1962-2129)
[»] scaffold0048 (1 HSPs)
scaffold0048 (132-300)||(81888-82054)
[»] scaffold0092 (1 HSPs)
scaffold0092 (138-300)||(5701-5862)
[»] scaffold0005 (1 HSPs)
scaffold0005 (250-300)||(56505-56555)
[»] scaffold0366 (2 HSPs)
scaffold0366 (133-240)||(14508-14617)
scaffold0366 (133-240)||(10842-10951)
[»] scaffold0729 (1 HSPs)
scaffold0729 (132-222)||(2616-2707)
[»] scaffold0129 (1 HSPs)
scaffold0129 (250-300)||(14349-14399)
[»] scaffold0459 (1 HSPs)
scaffold0459 (133-240)||(13201-13310)
[»] scaffold0181 (1 HSPs)
scaffold0181 (263-300)||(20985-21022)
[»] scaffold0211 (1 HSPs)
scaffold0211 (250-302)||(24622-24674)
[»] scaffold0481 (1 HSPs)
scaffold0481 (250-300)||(3459-3509)
[»] scaffold0766 (1 HSPs)
scaffold0766 (265-302)||(6318-6355)
[»] scaffold0400 (1 HSPs)
scaffold0400 (251-300)||(3891-3940)
[»] scaffold0365 (1 HSPs)
scaffold0365 (251-300)||(4535-4584)
[»] scaffold0045 (1 HSPs)
scaffold0045 (250-302)||(41194-41246)


Alignment Details
Target: chr1 (Bit Score: 231; Significance: 1e-127; HSPs: 43)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 231; E-Value: 1e-127
Query Start/End: Original strand, 1 - 324
Target Start/End: Complemental strand, 5572977 - 5572647
Alignment:
Q  1 atgttgtctgaattatgcctaattaatcagtgacattgtccacgatgtatacaaaatcatacgtagttatatatcaatagatgttaaattaatttattta 100  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  5572977 atgttgtctgaattatgcctaattaatcagtgacattgtccacgatgtatacaaaatcatacgtagttatatatcaatagatgttaaattaatttattta 5572878  T
Q  101 gaagacacac--------taataatattgtaatttcaatggactcttaacacacctctcacgatcagcactattggaattggttcgtggacataaatagt 192  Q
    ||||||||||        ||||||||||||||||||| |||| |||||||||||||||||||| ||| | ||||| ||||||||||||||||||||||||    
T  5572877 gaagacacacactaataataataatattgtaatttca-tggattcttaacacacctctcacgaccagtattattgaaattggttcgtggacataaatagt 5572779  T
Q  193 gtgtggcctgataacagaaacctggtagcaggtgatctaatggatcttaattatagactctgataccattttagaaatcgtggttgggcttaacacaacc 292  Q
    ||||||||||||| |||||| || ||||||||||||||||||||||||||||| || |||| ||||||||||||||||||| ||||||||||||||||||    
T  5572778 gtgtggcctgatagcagaaatctagtagcaggtgatctaatggatcttaattacaggctctaataccattttagaaatcgtagttgggcttaacacaacc 5572679  T
Q  293 ccataaaatcaacttgcaggtactattgtttt 324  Q
    ||| |||| |||||||| || |||||||||||    
T  5572678 ccacaaaaccaacttgcggggactattgtttt 5572647  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 59; E-Value: 6e-25
Query Start/End: Original strand, 132 - 300
Target Start/End: Complemental strand, 35772242 - 35772075
Alignment:
Q  132 ggactcttaacacacct-ctcacgatcagcactattggaattggttcgtggacataaatagtgtgtggcctgataacagaaacctggtagcaggtgatct 230  Q
    ||||||||||||||||  ||||| | | ||||||||||  ||||||||||||||||||| ||| |||||| |||| | |||||||| |||||| ||  |     
T  35772242 ggactcttaacacacccgctcacaaccggcactattgggcttggttcgtggacataaatggtgggtggcccgatagcggaaacctgatagcagatggccc 35772143  T
Q  231 aatggatcttaattatagactctgataccattttagaaatcgtggttgggcttaacacaaccccataaaa 300  Q
    |||||||||| |  |  | |||||||||||| ||||||||||||||||||| ||||||||||||| ||||    
T  35772142 aatggatcttgagaa--ggctctgataccatcttagaaatcgtggttgggcctaacacaaccccacaaaa 35772075  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 132 - 300
Target Start/End: Complemental strand, 26177121 - 26176954
Alignment:
Q  132 ggactcttaacacacctc-tcacgatcagcactattggaattggttcgtggacataaatagtgtgtggcctgataacagaaacctggtagcaggtgatct 230  Q
    |||||||||||||||| | |||||| ||||||||||||| |||||||||||| |||||| ||| |||| | |||| | |||| ||| |||||||||  |     
T  26177121 ggactcttaacacaccccgtcacgaccagcactattggacttggttcgtggatataaatggtgggtggtccgatagcggaaatctgatagcaggtggccc 26177022  T
Q  231 aatggatcttaattatagactctgataccattttagaaatcgtggttgggcttaacacaaccccataaaa 300  Q
    ||||||||||    | || |||||||| ||| |||||||||| |||||||| ||||||||||||| ||||    
T  26177021 aatggatctt--ggagaggctctgatatcatcttagaaatcgcggttgggcctaacacaaccccacaaaa 26176954  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 149 - 293
Target Start/End: Original strand, 4098292 - 4098434
Alignment:
Q  149 ctcacgatcagcactattggaattggttcgtggacataaatagtgtgtggcctgataacagaaacctggtagcaggtgatctaatggatcttaattatag 248  Q
    ||||||| || || ||||||  ||||||||||||||||||  ||| |||||| |||| |||||||||| | |||||||  | |||||||||| |  | ||    
T  4098292 ctcacgaccaacattattgggcttggttcgtggacataaagggtgggtggcccgatagcagaaacctgattgcaggtggcccaatggatcttga--agag 4098389  T
Q  249 actctgataccattttagaaatcgtggttgggcttaacacaaccc 293  Q
     |||||||||||  ||||||||||||||||||| |||||||||||    
T  4098390 tctctgataccaacttagaaatcgtggttgggcctaacacaaccc 4098434  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 172 - 300
Target Start/End: Complemental strand, 30370007 - 30369881
Alignment:
Q  172 tggttcgtggacataaatagtgtgtggcctgataacagaaacctggtagcaggtgatctaatggatcttaattatagactctgataccattttagaaatc 271  Q
    |||||||||||||||||| ||| |||||| ||||   |||||||| |||||||||| | ||||||||||    | || ||||||||| || |||||||||    
T  30370007 tggttcgtggacataaatggtgggtggcccgatagtggaaacctgatagcaggtgacccaatggatcttgg--agaggctctgatacaatcttagaaatc 30369910  T
Q  272 gtggttgggcttaacacaaccccataaaa 300  Q
    |||||||||| ||||||||||||| ||||    
T  30369909 gtggttgggcctaacacaaccccacaaaa 30369881  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 132 - 295
Target Start/End: Complemental strand, 35892269 - 35892107
Alignment:
Q  132 ggactcttaacacacc-tctcacgatcagcactattggaattggttcgtggacataaatagtgtgtggcctgataacagaaacctggtagcaggtgatct 230  Q
    |||||||||||||||| |||||||| |||||| |||||  ||  ||||||||||||||| ||| ||| || |||| ||||||  || ||||| |||  |     
T  35892269 ggactcttaacacaccctctcacgaccagcacaattgggcttaattcgtggacataaatggtgggtgccccgatagcagaaatatgatagcaagtggccc 35892170  T
Q  231 aatggatcttaattatagactctgataccattttagaaatcgtggttgggcttaacacaacccca 295  Q
    |||| ||||| |  | ||||||||||||| | ||||||||||||| |||||||||||||||||||    
T  35892169 aatgaatcttga--agagactctgataccttcttagaaatcgtggatgggcttaacacaacccca 35892107  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 132 - 302
Target Start/End: Complemental strand, 27413560 - 27413391
Alignment:
Q  132 ggactcttaacacacc-tctcacgatcagcactattggaattggttcgtggacataaatagtgtgtggcctgataacagaaacctggtagcaggtgatct 230  Q
    ||||| |||||||||| |||||||| || |||||||||  ||| ||||||||||||||| ||| |||||| |||| | |||| ||| || |||||| |||    
T  27413560 ggacttttaacacaccctctcacgaccaacactattgggcttgattcgtggacataaatggtgggtggcccgatagcggaaatctgataacaggtggtct 27413461  T
Q  231 aatggatcttaattatagactctgataccattttagaaatcgtggttgggcttaacacaaccccataaaatc 302  Q
    ||| ||||||    | || |||||||| ||| ||||||||||||||||| | |||||||||| || ||||||    
T  27413460 aatagatctt--ggagaggctctgatatcatcttagaaatcgtggttggacctaacacaacctcacaaaatc 27413391  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 149 - 292
Target Start/End: Original strand, 2859516 - 2859657
Alignment:
Q  149 ctcacgatcagcactattggaattggttcgtggacataaatagtgtgtggcctgataacagaaacctggtagcaggtgatctaatggatcttaattatag 248  Q
    ||||||| ||||||||||||  ||||||||||||||||||| ||| |||||| |||| |||||||||  ||| |||||  | |||||||||| |  | ||    
T  2859516 ctcacgaccagcactattgggcttggttcgtggacataaatggtgggtggcccgatagcagaaacctaatagaaggtggcccaatggatcttga--agag 2859613  T
Q  249 actctgataccattttagaaatcgtggttgggcttaacacaacc 292  Q
     |||| ||||||| ||||||||  ||||||||  ||||||||||    
T  2859614 gctctaataccatcttagaaatgatggttggggctaacacaacc 2859657  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 160 - 300
Target Start/End: Complemental strand, 33156918 - 33156779
Alignment:
Q  160 cactattggaattggttcgtggacataaatagtgtgtggcctgataacagaaacctggtagcaggtgatctaatggatcttaattatagactctgatacc 259  Q
    |||||||||  ||| ||||||||||||||| |||  ||||| |||| | |||||||| |||||||||| | || |||||||     ||| |||| |||||    
T  33156918 cactattgggcttgattcgtggacataaatggtggatggcccgatagcggaaacctgatagcaggtgaaccaacggatcttggag-taggctctaatacc 33156820  T
Q  260 attttagaaatcgtggttgggcttaacacaaccccataaaa 300  Q
    || ||||||||||||||||||| ||||||||||||| ||||    
T  33156819 atcttagaaatcgtggttgggcctaacacaaccccacaaaa 33156779  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 132 - 301
Target Start/End: Complemental strand, 38668338 - 38668170
Alignment:
Q  132 ggactcttaacacacct-ctcacgatcagcactattggaattggttcgtggacataaatagtgtgtggcctgataacagaaacctggtagcaggtgatct 230  Q
    ||||||||||||||||  ||||||| ||||| ||||||  ||||||| |||||||||||  |  ||| || |||| |||||||||| || ||||||| |     
T  38668338 ggactcttaacacacccactcacgaccagcaatattgggcttggttcatggacataaatgataggtgacccgatagcagaaacctgataacaggtgaccc 38668239  T
Q  231 aatggatcttaattatagactctgataccattttagaaatcgtggttgggcttaacacaaccccataaaat 301  Q
    |||||||| |    | || |||||||||||| |||||||| ||| |||||| ||||||||||||| |||||    
T  38668238 aatggatcatgg--agaggctctgataccatcttagaaattgtgattgggcctaacacaaccccacaaaat 38668170  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 132 - 278
Target Start/End: Complemental strand, 38733360 - 38733219
Alignment:
Q  132 ggactcttaacacacctc-tcacgatcagcactattggaattggttcgtggacataaatagtgtgtggcctgataacagaaacctggtagcaggtgatct 230  Q
    |||||||||||||||||| |||||| ||||||||||||  || |||||| || |||||| ||| |||    |||| | |||||||| ||||||||| ||     
T  38733360 ggactcttaacacacctcttcacgaccagcactattgggcttagttcgtagatataaatggtgggtg----gatagcggaaacctgatagcaggtggtcc 38733265  T
Q  231 aatggatcttaattatagactctgataccattttagaaatcgtggttg 278  Q
    ||||||||||    | ||||||||||||||| ||||||||||||||||    
T  38733264 aatggatctt--ggagagactctgataccatcttagaaatcgtggttg 38733219  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 131 - 300
Target Start/End: Original strand, 51460312 - 51460480
Alignment:
Q  131 tggactcttaacacacct-ctcacgatcagcactattggaattggttcgtggacataaatagtgtgtggcctgataacagaaacctggtagcaggtgatc 229  Q
    |||||||||||||||| | |||||||  ||||| ||||   |||||||||||||| |||| ||| || ||| |||| | |||||||| |||||||||  |    
T  51460312 tggactcttaacacacatactcacgactagcacaattgagtttggttcgtggacacaaatggtgggtcgcccgatagcggaaacctgatagcaggtggcc 51460411  T
Q  230 taatggatcttaattatagactctgataccattttagaaatcgtggttgggcttaacacaaccccataaaa 300  Q
     ||||||||||    | || |||||||| ||||||||||||  ||||||||| ||||||||||||| ||||    
T  51460412 caatggatctt--ggagaggctctgatatcattttagaaattatggttgggcctaacacaaccccacaaaa 51460480  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 132 - 300
Target Start/End: Original strand, 4112877 - 4113044
Alignment:
Q  132 ggactcttaacacacctc-tcacgatcagcactattggaattggttcgtggacataaatagtgtgtggcctgataacagaaacctggtagcaggtgatct 230  Q
    |||||||||||||||| | |||||| |||||||||||   ||||||||||||||||||| ||| |||| |  ||| | |||||||| |||  ||||        
T  4112877 ggactcttaacacaccccctcacgaccagcactattgagcttggttcgtggacataaatggtgggtggtccaatagcggaaacctgatagatggtggctc 4112976  T
Q  231 aatggatcttaattatagactctgataccattttagaaatcgtggttgggcttaacacaaccccataaaa 300  Q
    ||||||||||    | || ||| |||||||| ||||||||||||||||||| ||||||||||||| ||||    
T  4112977 aatggatcttgg--agaggctccgataccatcttagaaatcgtggttgggcctaacacaaccccacaaaa 4113044  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 133 - 295
Target Start/End: Original strand, 25145592 - 25145753
Alignment:
Q  133 gactcttaacacacctc-tcacgatcagcactattggaattggttcgtggacataaatagtgtgtggcctgataacagaaacctggtagcaggtgatcta 231  Q
    ||||||||||||||| | |||||| |||||||||||   ||| ||||||||||| ||| ||| |||| | |||||| |||||||| |||||||||    |    
T  25145592 gactcttaacacaccccctcacgaccagcactattgagcttgattcgtggacattaatggtgggtggtccgataacggaaacctgatagcaggtgggtca 25145691  T
Q  232 atggatcttaattatagactctgataccattttagaaatcgtggttgggcttaacacaacccca 295  Q
    || ||||||    | || |||||||| ||| ||||||||| ||||||||| |||||||||||||    
T  25145692 atagatctt--ggagaggctctgatatcatcttagaaatcatggttgggcctaacacaacccca 25145753  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 134 - 300
Target Start/End: Original strand, 31496244 - 31496409
Alignment:
Q  134 actcttaacacacctct-cacgatcagcactattggaattggttcgtggacataaatagtgtgtggcctgataacagaaacctggtagcaggtgatctaa 232  Q
    |||||||||||||| || ||||| |||||||| ||   ||| || ||| |||||||| ||| |||| | |||| | | |||||| ||||||||| || ||    
T  31496244 actcttaacacaccccttcacgaccagcactactgagcttgattagtgcacataaatggtgggtggtccgatagcgggaacctgatagcaggtggtccaa 31496343  T
Q  233 tggatcttaattatagactctgataccattttagaaatcgtggttgggcttaacacaaccccataaaa 300  Q
    ||||||||||  | ||||||| |||| || |||||||||||| ||| |  ||||||||||||||||||    
T  31496344 tggatcttaa--agagactctaatactatcttagaaatcgtgattgagtctaacacaaccccataaaa 31496409  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 250 - 302
Target Start/End: Complemental strand, 51589902 - 51589850
Alignment:
Q  250 ctctgataccattttagaaatcgtggttgggcttaacacaaccccataaaatc 302  Q
    |||||||||||| ||||||||||||||||||| ||||||||||||| ||||||    
T  51589902 ctctgataccatattagaaatcgtggttgggcctaacacaaccccacaaaatc 51589850  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 136 - 241
Target Start/End: Complemental strand, 369841 - 369734
Alignment:
Q  136 tcttaacaca-cctctcacgatcagcactattggaattggttcgtggacataaatagtgtgtg-gcctgataacagaaacctggtagcaggtgatctaat 233  Q
    |||||||||| || ||||||| ||||||||||||  ||||||||||||||||||| ||| |||  || |||| | |||||||| |||||| ||||| |||    
T  369841 tcttaacacatcccctcacgaccagcactattgggcttggttcgtggacataaatggtgggtgaccccgatagcggaaacctgatagcagctgatccaat 369742  T
Q  234 ggatctta 241  Q
    ||||||||    
T  369741 ggatctta 369734  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 249 - 300
Target Start/End: Complemental strand, 3169863 - 3169812
Alignment:
Q  249 actctgataccattttagaaatcgtggttgggcttaacacaaccccataaaa 300  Q
    ||||||||||||| ||||||||||||||||||| ||||||||||||| ||||    
T  3169863 actctgataccatattagaaatcgtggttgggcctaacacaaccccacaaaa 3169812  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 149 - 300
Target Start/End: Original strand, 12376562 - 12376711
Alignment:
Q  149 ctcacgatcagcactattggaattggttcgtggacataaatagtgtgtggcctgataacagaaacctggtagcaggtgatctaatggatcttaattatag 248  Q
    ||||||| || |||||||||  ||||||||||||||||||| ||  ||||||||||| ||| |||||| |||||||||  | ||||||||||||    |     
T  12376562 ctcacgaccaacactattgggcttggttcgtggacataaatggtaggtggcctgatagcag-aacctgatagcaggtggcccaatggatcttaa-cggat 12376659  T
Q  249 actctgataccattttagaaatcgtggttgggcttaacacaaccccataaaa 300  Q
     |||| ||||||  ||||||||||| ||||| | |||| |||||||||||||    
T  12376660 gctctaataccaacttagaaatcgtcgttggacctaactcaaccccataaaa 12376711  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 250 - 300
Target Start/End: Complemental strand, 29266049 - 29265999
Alignment:
Q  250 ctctgataccattttagaaatcgtggttgggcttaacacaaccccataaaa 300  Q
    |||||||||||| ||||||||||||||||||| ||||||||||||| ||||    
T  29266049 ctctgataccatcttagaaatcgtggttgggcctaacacaaccccacaaaa 29265999  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 150 - 300
Target Start/End: Original strand, 39348242 - 39348390
Alignment:
Q  150 tcacgatcagcactattggaattggttcgtggacataaatagtgtgtggcctgataacagaaacctggtagcaggtgatctaatggatcttaattataga 249  Q
    |||||| ||||||||||||  ||||||||||||||||||| ||| |||| | ||||   |||||||| |||||||||  | |||||| |||      ||     
T  39348242 tcacgaccagcactattgggcttggttcgtggacataaatggtgggtggtccgatagtggaaacctgatagcaggtggcccaatggacctt-ggaggagg 39348340  T
Q  250 ctctgataccattttagaaatcgtggttgggcttaacacaaccccataaaa 300  Q
    |||||||||||| ||||||||||| ||||||| ||||||||||||| ||||    
T  39348341 ctctgataccatcttagaaatcgt-gttgggcctaacacaaccccacaaaa 39348390  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 132 - 240
Target Start/End: Complemental strand, 25713371 - 25713262
Alignment:
Q  132 ggactcttaacacacctc-tcacgatcagcactattggaattggttcgtggacataaatagtgtgtggcctgataacagaaacctggtagcaggtgatct 230  Q
    ||||||||||||| || | |||||| || |||||||||  ||||||||||||||||||| ||| |||||| |||| | ||||| || |||||||||  |     
T  25713371 ggactcttaacaccccccctcacgaccaacactattgggcttggttcgtggacataaatggtgggtggcccgatagcggaaacttgatagcaggtggccc 25713272  T
Q  231 aatggatctt 240  Q
    ||||||||||    
T  25713271 aatggatctt 25713262  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 199 - 279
Target Start/End: Original strand, 32783220 - 32783298
Alignment:
Q  199 cctgataacagaaacctggtagcaggtgatctaatggatcttaattatagactctgataccattttagaaatcgtggttgg 279  Q
    ||||||| |||||||||| ||||||||| |  |||||||||| |  | ||||||||||||||| |||||||||||||||||    
T  32783220 cctgatagcagaaacctgatagcaggtggtacaatggatcttga--agagactctgataccatcttagaaatcgtggttgg 32783298  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 131 - 237
Target Start/End: Complemental strand, 39100560 - 39100453
Alignment:
Q  131 tggactcttaacacacc-tctcacgatcagcactattggaattggttcgtggacataaatagtgtgtggcctgataacagaaacctggtagcaggtgatc 229  Q
    |||||||||||||| || |||||||| |||  |||||||  ||| ||||||||||||||||||| ||| || ||||| | ||||||| |||||| ||| |    
T  39100560 tggactcttaacaccccctctcacgaccagttctattgggtttgattcgtggacataaatagtgggtgacccgataataaaaacctgatagcagatgacc 39100461  T
Q  230 taatggat 237  Q
     |||||||    
T  39100460 caatggat 39100453  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 132 - 205
Target Start/End: Original strand, 8870795 - 8870869
Alignment:
Q  132 ggactcttaacacacctc-tcacgatcagcactattggaattggttcgtggacataaatagtgtgtggcctgata 205  Q
    |||||||||||||||| | |||||| |||||| |||||  ||||||||||||||||||| ||| ||||| |||||    
T  8870795 ggactcttaacacaccccctcacgaccagcacaattgggtttggttcgtggacataaatggtgggtggcttgata 8870869  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 250 - 300
Target Start/End: Complemental strand, 51589322 - 51589272
Alignment:
Q  250 ctctgataccattttagaaatcgtggttgggcttaacacaaccccataaaa 300  Q
    |||||||||||| ||||||||||||||| ||| ||||||||||||| ||||    
T  51589322 ctctgataccatattagaaatcgtggttaggcctaacacaaccccacaaaa 51589272  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 247 - 300
Target Start/End: Original strand, 8870895 - 8870948
Alignment:
Q  247 agactctgataccattttagaaatcgtggttgggcttaacacaaccccataaaa 300  Q
    ||||||||||||||| |||||||| |||||||| | ||||||||||||| ||||    
T  8870895 agactctgataccatcttagaaatggtggttggacctaacacaaccccacaaaa 8870948  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 149 - 226
Target Start/End: Original strand, 12325421 - 12325497
Alignment:
Q  149 ctcacgatcagcactattggaattggttcgtggacataaatagtgtgtggcctgataacagaaacctggtagcaggtg 226  Q
    ||||||| || |||||||||  ||||||||||||||||||| ||  |||||| |||||||| |||||| |||||||||    
T  12325421 ctcacgaccaacactattgggcttggttcgtggacataaatggtaggtggcccgataacag-aacctgatagcaggtg 12325497  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 132 - 240
Target Start/End: Complemental strand, 17412545 - 17412436
Alignment:
Q  132 ggactcttaacacacctc-tcacgatcagcactattggaattggttcgtggacataaatagtgtgtggcctgataacagaaacctggtagcaggtgatct 230  Q
    ||||| |||||||||| | |||||| || |||||||||  ||| |||||||||||||||  || |||||  ||||||  ||| ||| ||||| |||||||    
T  17412545 ggacttttaacacaccccatcacgaccaacactattgggcttgattcgtggacataaatgatgggtggctcgataacgaaaatctgatagcaagtgatct 17412446  T
Q  231 aatggatctt 240  Q
    ||||||||||    
T  17412445 aatggatctt 17412436  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 133 - 240
Target Start/End: Complemental strand, 7307933 - 7307825
Alignment:
Q  133 gactcttaacacacctc-tcacgatcagcactattggaattggttcgtggacataaatagtgtgtggcctgataacagaaacctggtagcaggtgatcta 231  Q
    ||||||||| ||||| | |||||| || |||||||||| ||||||||||||||||||| ||| |||| |  ||| | |||||||| ||||||  || | |    
T  7307933 gactcttaatacaccccctcacgaccaacactattggatttggttcgtggacataaatggtgggtggtccaatagcggaaacctgatagcagacgaccca 7307834  T
Q  232 atggatctt 240  Q
    |||||||||    
T  7307833 atggatctt 7307825  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 132 - 226
Target Start/End: Complemental strand, 16163145 - 16163051
Alignment:
Q  132 ggactcttaacacac-ctctcacgatcagcactattggaattggttcgtggacataaatagtgtgtggcctgataacagaaacctggtagcaggtg 226  Q
    ||||||||||||||| | ||||||| ||||||||| ||  |||| |||||||||||||| ||  |||||| |||| | |||||||| |||||||||    
T  16163145 ggactcttaacacacaccctcacgaccagcactatgggc-ttggctcgtggacataaatggtaggtggcccgatagcggaaacctgatagcaggtg 16163051  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 261 - 300
Target Start/End: Original strand, 17452678 - 17452717
Alignment:
Q  261 ttttagaaatcgtggttgggcttaacacaaccccataaaa 300  Q
    ||||||||||||||||||||| ||||||||||||| ||||    
T  17452678 ttttagaaatcgtggttgggcctaacacaaccccacaaaa 17452717  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 255 - 298
Target Start/End: Original strand, 51460043 - 51460086
Alignment:
Q  255 ataccattttagaaatcgtggttgggcttaacacaaccccataa 298  Q
    ||||||| |||||||| |||||||||| ||||||||||||||||    
T  51460043 ataccatcttagaaattgtggttgggcctaacacaaccccataa 51460086  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 253 - 300
Target Start/End: Complemental strand, 51589085 - 51589038
Alignment:
Q  253 tgataccattttagaaatcgtggttgggcttaacacaaccccataaaa 300  Q
    ||||||||| |||||||| |||||||||| ||||||||||||| ||||    
T  51589085 tgataccatattagaaatggtggttgggcctaacacaaccccacaaaa 51589038  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 250 - 300
Target Start/End: Original strand, 17452816 - 17452866
Alignment:
Q  250 ctctgataccattttagaaatcgtggttgggcttaacacaaccccataaaa 300  Q
    |||| ||||||| ||||||||||||||| ||| ||||||||||||| ||||    
T  17452816 ctctaataccatcttagaaatcgtggttaggcctaacacaaccccacaaaa 17452866  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 263 - 301
Target Start/End: Original strand, 42586440 - 42586478
Alignment:
Q  263 ttagaaatcgtggttgggcttaacacaaccccataaaat 301  Q
    ||||||||||||||||||| ||||||||||||| |||||    
T  42586440 ttagaaatcgtggttgggcctaacacaaccccacaaaat 42586478  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 247 - 300
Target Start/End: Complemental strand, 9499344 - 9499291
Alignment:
Q  247 agactctgataccattttagaaatcgtggttgggcttaacacaaccccataaaa 300  Q
    ||||||||||| |||||||||||||||||||| |   |||||||||||| ||||    
T  9499344 agactctgatatcattttagaaatcgtggttgagtcgaacacaaccccacaaaa 9499291  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 263 - 300
Target Start/End: Complemental strand, 25255394 - 25255357
Alignment:
Q  263 ttagaaatcgtggttgggcttaacacaaccccataaaa 300  Q
    ||||||||||||||||||| ||||||||||||| ||||    
T  25255394 ttagaaatcgtggttgggcctaacacaaccccacaaaa 25255357  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 263 - 300
Target Start/End: Complemental strand, 26177226 - 26177189
Alignment:
Q  263 ttagaaatcgtggttgggcttaacacaaccccataaaa 300  Q
    ||||||||||||||||||| ||||||||||||| ||||    
T  26177226 ttagaaatcgtggttgggcctaacacaaccccacaaaa 26177189  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 263 - 300
Target Start/End: Complemental strand, 35772347 - 35772310
Alignment:
Q  263 ttagaaatcgtggttgggcttaacacaaccccataaaa 300  Q
    ||||||||||||||||||| ||||||||||||| ||||    
T  35772347 ttagaaatcgtggttgggcctaacacaaccccacaaaa 35772310  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 263 - 300
Target Start/End: Complemental strand, 40079235 - 40079198
Alignment:
Q  263 ttagaaatcgtggttgggcttaacacaaccccataaaa 300  Q
    ||||||||||||||||||| ||||||||||||| ||||    
T  40079235 ttagaaatcgtggttgggcctaacacaaccccacaaaa 40079198  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 263 - 295
Target Start/End: Original strand, 20208230 - 20208262
Alignment:
Q  263 ttagaaatcgtggttgggcttaacacaacccca 295  Q
    ||||||||||||||||||| |||||||||||||    
T  20208230 ttagaaatcgtggttgggcctaacacaacccca 20208262  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 263 - 295
Target Start/End: Original strand, 20208529 - 20208561
Alignment:
Q  263 ttagaaatcgtggttgggcttaacacaacccca 295  Q
    ||||||||||||||||||| |||||||||||||    
T  20208529 ttagaaatcgtggttgggcctaacacaacccca 20208561  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 77; Significance: 1e-35; HSPs: 43)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 132 - 300
Target Start/End: Complemental strand, 35788872 - 35788705
Alignment:
Q  132 ggactcttaacacacctctcacgatcagcactattggaattggttcgtggacataaatagtgtgtggcctgataacagaaacctggtagcaggtgatcta 231  Q
    ||||||||||||| || ||||||| ||||||||||||  ||||||||||||||||||| ||| ||||||||||||| |||||||| |||||||||  | |    
T  35788872 ggactcttaacacccccctcacgaccagcactattgggcttggttcgtggacataaatggtgggtggcctgataacggaaacctgatagcaggtggccca 35788773  T
Q  232 atggatcttaattatagactctgataccattttagaaatcgtggttgggcttaacacaaccccataaaa 300  Q
    | |||||||      || |||||||||||| ||||||||||||||||||| ||||||||||||||||||    
T  35788772 acggatctt-ggaggaggctctgataccatcttagaaatcgtggttgggcctaacacaaccccataaaa 35788705  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 134 - 300
Target Start/End: Original strand, 35796850 - 35797015
Alignment:
Q  134 actcttaacacacctc-tcacgatcagcactattggaattggttcgtggacataaatagtgtgtggcctgataacagaaacctggtagcaggtgatctaa 232  Q
    |||||||||||||| | |||||| ||||||||||||  |||||||||||| |||||| ||| |||||| |||| | |||||||| ||||||||  || ||    
T  35796850 actcttaacacaccccctcacgaccagcactattgggcttggttcgtggagataaatggtgggtggcccgatagcggaaacctgatagcaggtagtccaa 35796949  T
Q  233 tggatcttaattatagactctgataccattttagaaatcgtggttgggcttaacacaaccccataaaa 300  Q
    |||||||  |  | || |||||||||||| |||||||| || ||||||||||||||||||||| ||||    
T  35796950 tggatctcga--agaggctctgataccatcttagaaatggtagttgggcttaacacaaccccacaaaa 35797015  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 59; E-Value: 6e-25
Query Start/End: Original strand, 132 - 300
Target Start/End: Original strand, 22231179 - 22231346
Alignment:
Q  132 ggactcttaacaca-cctctcacgatcagcactattggaattggttcgtggacataaatagtgtgtggcctgataacagaaacctggtagcaggtgatct 230  Q
    |||||||||||||| || |||| ||| |||||||||||  ||||||||||||||||||| ||  |||||| |||| | |||||||| |||||||||  |     
T  22231179 ggactcttaacacatcccctcatgatgagcactattgggcttggttcgtggacataaatggtaggtggcccgatagcggaaacctgatagcaggtggccc 22231278  T
Q  231 aatggatcttaattatagactctgataccattttagaaatcgtggttgggcttaacacaaccccataaaa 300  Q
    ||||||| ||    | || |||||||||||| ||||||||||||||||||| ||||||||||||| ||||    
T  22231279 aatggatttt--ggagaggctctgataccatcttagaaatcgtggttgggcctaacacaaccccacaaaa 22231346  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 59; E-Value: 6e-25
Query Start/End: Original strand, 133 - 281
Target Start/End: Original strand, 28245633 - 28245780
Alignment:
Q  133 gactcttaacacacctc-tcacgatcagcactattggaattggttcgtggacataaatagtgtgtggcctgataacagaaacctggtagcaggtgatcta 231  Q
    ||||||||||||||| | |||||| ||||||||||||  ||||||||||||||||||| ||| |||||| |||| | |||||||| |||||||||  | |    
T  28245633 gactcttaacacaccccatcacgaccagcactattgggcttggttcgtggacataaatggtgggtggcccgatagcggaaacctgatagcaggtggccca 28245732  T
Q  232 atggatcttaattatagactctgataccattttagaaatcgtggttgggc 281  Q
    |||||||||    | || |||||||||||| |||||||||||||||||||    
T  28245733 atggatctt--ggagaggctctgataccatattagaaatcgtggttgggc 28245780  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 135 - 300
Target Start/End: Original strand, 50543439 - 50543605
Alignment:
Q  135 ctcttaacacacctc-tcacgatcagcactattggaattggttcgtggacataaatagtgtgtggcctgataacagaaacctggtagcaggtgatcta-- 231  Q
    ||||||||||||| | |||||| || |||||||||  ||||||||||||||||||| ||| |||||| |||||| |||||||| ||||||||| || |      
T  50543439 ctcttaacacaccccctcacgaccaacactattgggcttggttcgtggacataaatggtgggtggcccgataacggaaacctgatagcaggtggtcaaat 50543538  T
Q  232 atggatcttaattatagactctgataccattttagaaatcgtggttgggcttaacacaaccccataaaa 300  Q
    |||||||||    | || |||||||| ||| ||||||||||||||||||| ||||||||| ||| ||||    
T  50543539 atggatctt--ggagaggctctgatatcatcttagaaatcgtggttgggcctaacacaactccacaaaa 50543605  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 157 - 292
Target Start/End: Original strand, 35819025 - 35819158
Alignment:
Q  157 cagcactattggaattggttcgtggacataaatagtgtgtggcctgataacagaaacctggtagcaggtgatctaatggatcttaattatagactctgat 256  Q
    ||||||||||||  ||||||||||||||||||| ||| ||| || |||| | |||||||| |||||||||  | |||||||||||   | ||||||||||    
T  35819025 cagcactattgggcttggttcgtggacataaatggtgggtgacccgatagcggaaacctgatagcaggtggcccaatggatctta--gagagactctgat 35819122  T
Q  257 accattttagaaatcgtggttgggcttaacacaacc 292  Q
     |||| ||| ||||||||||||||| ||||||||||    
T  35819123 gccatcttaaaaatcgtggttgggcctaacacaacc 35819158  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 132 - 300
Target Start/End: Original strand, 40717312 - 40717479
Alignment:
Q  132 ggactcttaacacacctc-tcacgatcagcactattggaattggttcgtggacataaatagtgtgtggcctgataacagaaacctggtagcaggtgatct 230  Q
    |||||||||||||||| | |||||| |||||||||| |  |||||| |||||||||||| ||| |||| | |||| | |||||||| | |||||||  |     
T  40717312 ggactcttaacacaccccctcacgaccagcactattaggcttggtttgtggacataaatggtgggtggtccgatagcggaaacctgatggcaggtggccc 40717411  T
Q  231 aatggatcttaattatagactctgataccattttagaaatcgtggttgggcttaacacaaccccataaaa 300  Q
    ||||||| ||    | || |||||||||||| ||||||||||||||||||| ||||||||||||| ||||    
T  40717412 aatggatattgg--agaggctctgataccatcttagaaatcgtggttgggcctaacacaaccccacaaaa 40717479  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 133 - 300
Target Start/End: Complemental strand, 6218416 - 6218250
Alignment:
Q  133 gactcttaacacacctc-tcacgatcagcactattggaattggttcgtggacataaatagtgtgtggcctgataacagaaacctggtagcaggtgatcta 231  Q
    ||||||||||||||| | |||||| ||||||||||||  ||||||| || ||||||||  || ||| ||||||| | |||||||| ||| |||||||| |    
T  6218416 gactcttaacacaccccctcacgaccagcactattgggcttggttcttgtacataaatgatgggtgacctgatagcggaaacctgatagtaggtgatcca 6218317  T
Q  232 atggatcttaattatagactctgataccattttagaaatcgtggttgggcttaacacaaccccataaaa 300  Q
    |||||||||    | || |||||||||||| |||||||||||||||| |  ||||||||| ||| ||||    
T  6218316 atggatctt--ggagaggctctgataccatcttagaaatcgtggttgtgtctaacacaactccacaaaa 6218250  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 132 - 240
Target Start/End: Original strand, 27634187 - 27634296
Alignment:
Q  132 ggactcttaacacacctc-tcacgatcagcactattggaattggttcgtggacataaatagtgtgtggcctgataacagaaacctggtagcaggtgatct 230  Q
    ||||||||||||| || | |||||| ||||||||||||  |||||||||||||||||| |||| |||| | |||| |||||||||| ||||| ||| ||     
T  27634187 ggactcttaacaccccccctcacgaccagcactattgggcttggttcgtggacataaacagtgggtggtccgatagcagaaacctgatagcaagtggtcc 27634286  T
Q  231 aatggatctt 240  Q
    ||||||||||    
T  27634287 aatggatctt 27634296  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 250 - 300
Target Start/End: Original strand, 53814917 - 53814967
Alignment:
Q  250 ctctgataccattttagaaatcgtggttgggcttaacacaaccccataaaa 300  Q
    |||||||||||| ||||||||||||||||||||||||||||||||| ||||    
T  53814917 ctctgataccatattagaaatcgtggttgggcttaacacaaccccacaaaa 53814967  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 247 - 300
Target Start/End: Original strand, 12869248 - 12869301
Alignment:
Q  247 agactctgataccattttagaaatcgtggttgggcttaacacaaccccataaaa 300  Q
    ||||||||||||||| ||||||||||||||||||| ||||||||||||| ||||    
T  12869248 agactctgataccatcttagaaatcgtggttgggcctaacacaaccccacaaaa 12869301  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 247 - 300
Target Start/End: Complemental strand, 17111662 - 17111609
Alignment:
Q  247 agactctgataccattttagaaatcgtggttgggcttaacacaaccccataaaa 300  Q
    ||||||||||||||| ||||||||||||||||||| ||||||||||||| ||||    
T  17111662 agactctgataccatcttagaaatcgtggttgggcctaacacaaccccacaaaa 17111609  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 132 - 226
Target Start/End: Original strand, 5398581 - 5398676
Alignment:
Q  132 ggactcttaacacacctc-tcacgatcagcactattggaattggttcgtggacataaatagtgtgtggcctgataacagaaacctggtagcaggtg 226  Q
    |||||||||||||||| | |||||| |||||||||| |  ||||||||||||||||||| ||| |||| | |||| | |||||||| |||||||||    
T  5398581 ggactcttaacacaccccctcacgaccagcactatttggcttggttcgtggacataaatggtgggtggtccgatagcggaaacctgatagcaggtg 5398676  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 250 - 300
Target Start/End: Original strand, 14783175 - 14783225
Alignment:
Q  250 ctctgataccattttagaaatcgtggttgggcttaacacaaccccataaaa 300  Q
    |||||||||||| ||||||||||||||||||| ||||||||||||| ||||    
T  14783175 ctctgataccatattagaaatcgtggttgggcctaacacaaccccacaaaa 14783225  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 250 - 300
Target Start/End: Complemental strand, 25052948 - 25052898
Alignment:
Q  250 ctctgataccattttagaaatcgtggttgggcttaacacaaccccataaaa 300  Q
    |||||||||||| ||||||||||||||||||| ||||||||||||| ||||    
T  25052948 ctctgataccatgttagaaatcgtggttgggcctaacacaaccccacaaaa 25052898  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 157 - 300
Target Start/End: Complemental strand, 52559756 - 52559613
Alignment:
Q  157 cagcactattggaattggttcgtggacataaatagtgtgtggcctgataacagaaacctggtagcaggt-gatctaatggatcttaatta-tagactctg 254  Q
    ||||||||||||  ||||||||||||||||||| ||| |||||| ||||||| |||| || |||||||| |  | || |||||||  | |  || |||||    
T  52559756 cagcactattgggcttggttcgtggacataaatggtgggtggcccgataacataaacttgatagcaggtggcccaaacggatctt--tgaggaggctctg 52559659  T
Q  255 ataccattttagaaatcgtggttgggcttaacacaaccccataaaa 300  Q
    |||| || ||||||||| ||||||||| ||||||||||||| ||||    
T  52559658 atactatcttagaaatcatggttgggcctaacacaaccccacaaaa 52559613  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 132 - 240
Target Start/End: Original strand, 5398317 - 5398425
Alignment:
Q  132 ggactcttaacacacctctcacgatcagcactattggaattggttcgtggacataaatagtgtgtggcctgataacagaaacctggtagcaggtgatcta 231  Q
    |||||||||||||||| ||||||| || || ||||||  ||||||||||||||||||| ||| |||| | ||||   |||||||| |||||| ||| | |    
T  5398317 ggactcttaacacacccctcacgaccaacattattgggcttggttcgtggacataaatggtgggtggtccgataggggaaacctgatagcagatgaccca 5398416  T
Q  232 atggatctt 240  Q
     ||||||||    
T  5398417 ttggatctt 5398425  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 141 - 240
Target Start/End: Original strand, 12005587 - 12005689
Alignment:
Q  141 acacacctctcacgatcagcactattgg---aattggttcgtggacataaatagtgtgtggcctgataacagaaacctggtagcaggtgatctaatggat 237  Q
    ||||||| ||||||| ||||||||||||     ||||||||| ||||||||| ||||||||||||||| | |||||||| ||| |||||| | | |||||    
T  12005587 acacacccctcacgaccagcactattgggcttgttggttcgttgacataaatggtgtgtggcctgatagcggaaacctgatagtaggtgacccagtggat 12005686  T
Q  238 ctt 240  Q
    |||    
T  12005687 ctt 12005689  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 250 - 302
Target Start/End: Original strand, 53828511 - 53828563
Alignment:
Q  250 ctctgataccattttagaaatcgtggttgggcttaacacaaccccataaaatc 302  Q
    |||||||||||| |||||||| |||||||||| ||||||||||||| ||||||    
T  53828511 ctctgataccatcttagaaattgtggttgggcctaacacaaccccacaaaatc 53828563  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 132 - 222
Target Start/End: Original strand, 6778549 - 6778640
Alignment:
Q  132 ggactcttaacacacctc-tcacgatcagcactattggaattggttcgtggacataaatagtgtgtggcctgataacagaaacctggtagca 222  Q
    |||||||||||||||| | ||||||||||||||||| |  ||||||||| ||||||||| | | |||||| |||| | |||||||| |||||    
T  6778549 ggactcttaacacaccccctcacgatcagcactattaggtttggttcgtagacataaatggggggtggcccgatagcggaaacctgatagca 6778640  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 250 - 300
Target Start/End: Complemental strand, 1518260 - 1518210
Alignment:
Q  250 ctctgataccattttagaaatcgtggttgggcttaacacaaccccataaaa 300  Q
    |||||||||||| ||||||||||||||| ||| ||||||||||||| ||||    
T  1518260 ctctgataccatcttagaaatcgtggttaggcctaacacaaccccacaaaa 1518210  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 250 - 292
Target Start/End: Complemental strand, 9685494 - 9685452
Alignment:
Q  250 ctctgataccattttagaaatcgtggttgggcttaacacaacc 292  Q
    |||||||||||| ||||||||||||||||||| ||||||||||    
T  9685494 ctctgataccatattagaaatcgtggttgggcctaacacaacc 9685452  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 250 - 300
Target Start/End: Complemental strand, 21498450 - 21498400
Alignment:
Q  250 ctctgataccattttagaaatcgtggttgggcttaacacaaccccataaaa 300  Q
    |||||||||||| ||||||||||||||||||| ||||| ||||||| ||||    
T  21498450 ctctgataccatattagaaatcgtggttgggcctaacataaccccacaaaa 21498400  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 209 - 307
Target Start/End: Complemental strand, 26030448 - 26030351
Alignment:
Q  209 gaaacctggtagcaggtgatctaatggatcttaattatagactctgataccattttagaaatcgtggttgggcttaacacaaccccataaaatcaactt 307  Q
    ||||||| |||||||||| |  |||||||||||| ||  || ||||||||||| |||||||| |||||||  |||||| |||||| | |||||||||||    
T  26030448 gaaacctcgtagcaggtggttcaatggatcttaactaagga-tctgataccatcttagaaattgtggttgaacttaactcaaccctacaaaatcaactt 26030351  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 177 - 227
Target Start/End: Complemental strand, 26549591 - 26549541
Alignment:
Q  177 cgtggacataaatagtgtgtggcctgataacagaaacctggtagcaggtga 227  Q
    |||||||||||||  || |||||||||||||||||||||| ||||||||||    
T  26549591 cgtggacataaatgatgggtggcctgataacagaaacctgatagcaggtga 26549541  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 250 - 300
Target Start/End: Original strand, 50543318 - 50543368
Alignment:
Q  250 ctctgataccattttagaaatcgtggttgggcttaacacaaccccataaaa 300  Q
    |||||||| ||| ||||||||||||||||||| ||||||||||||| ||||    
T  50543318 ctctgataacatcttagaaatcgtggttgggcctaacacaaccccacaaaa 50543368  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 263 - 300
Target Start/End: Complemental strand, 9685715 - 9685678
Alignment:
Q  263 ttagaaatcgtggttgggcttaacacaaccccataaaa 300  Q
    ||||||||||||||||||| ||||||||||||||||||    
T  9685715 ttagaaatcgtggttgggcctaacacaaccccataaaa 9685678  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 160 - 216
Target Start/End: Complemental strand, 1215939 - 1215883
Alignment:
Q  160 cactattggaattggttcgtggacataaatagtgtgtggcctgataacagaaacctg 216  Q
    |||||||||| ||||||||||||||||||| ||| ||  ||||||| ||||||||||    
T  1215939 cactattggacttggttcgtggacataaatggtgggtaacctgatatcagaaacctg 1215883  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 149 - 300
Target Start/End: Complemental strand, 4645837 - 4645688
Alignment:
Q  149 ctcacgatcagcactattggaattggttcgtggacataaatagtgtgtggcctgataacagaaacctggtagcaggtgatctaatggatcttaattatag 248  Q
    ||||||| || |||| ||||  ||| ||||||||||||| | ||| |||||| |||| | |||||||| |||||||||| | ||||||||||  | | ||    
T  4645837 ctcacgaccaacacttttgggcttgattcgtggacataattggtgggtggcccgatagcggaaacctgatagcaggtgacccaatggatctt--tgagag 4645740  T
Q  249 actctgataccattttagaaatcgtggttgggcttaacacaaccccataaaa 300  Q
     ||||||||| || ||| ||||| |||||| |  |||||||| |||| ||||    
T  4645739 gctctgatactatcttataaatcatggttgagtctaacacaatcccacaaaa 4645688  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 250 - 302
Target Start/End: Complemental strand, 52827518 - 52827466
Alignment:
Q  250 ctctgataccattttagaaatcgtggttgggcttaacacaaccccataaaatc 302  Q
    |||||||||||| ||| ||||||||||||||||| |||||||| || ||||||    
T  52827518 ctctgataccatcttaaaaatcgtggttgggcttgacacaacctcacaaaatc 52827466  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 263 - 302
Target Start/End: Complemental strand, 21685081 - 21685042
Alignment:
Q  263 ttagaaatcgtggttgggcttaacacaaccccataaaatc 302  Q
    |||||||| |||||||||||||||||||||||| ||||||    
T  21685081 ttagaaattgtggttgggcttaacacaaccccacaaaatc 21685042  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 245 - 292
Target Start/End: Original strand, 52827408 - 52827455
Alignment:
Q  245 atagactctgataccattttagaaatcgtggttgggcttaacacaacc 292  Q
    |||| |||||||||||| ||||||||| ||||||||| ||||||||||    
T  52827408 ataggctctgataccatcttagaaatcatggttgggcctaacacaacc 52827455  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 263 - 302
Target Start/End: Original strand, 53559291 - 53559330
Alignment:
Q  263 ttagaaatcgtggttgggcttaacacaaccccataaaatc 302  Q
    ||||||||||||||||||| ||||||||||||| ||||||    
T  53559291 ttagaaatcgtggttgggcctaacacaaccccacaaaatc 53559330  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 263 - 300
Target Start/End: Complemental strand, 21498878 - 21498841
Alignment:
Q  263 ttagaaatcgtggttgggcttaacacaaccccataaaa 300  Q
    ||||||||||||||||||| ||||||||||||| ||||    
T  21498878 ttagaaatcgtggttgggcctaacacaaccccacaaaa 21498841  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 263 - 300
Target Start/End: Original strand, 22845448 - 22845485
Alignment:
Q  263 ttagaaatcgtggttgggcttaacacaaccccataaaa 300  Q
    ||||||||||||||||||| ||||||||||||| ||||    
T  22845448 ttagaaatcgtggttgggcctaacacaaccccacaaaa 22845485  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 263 - 300
Target Start/End: Complemental strand, 22863557 - 22863520
Alignment:
Q  263 ttagaaatcgtggttgggcttaacacaaccccataaaa 300  Q
    ||||||||||||||||||| ||||||||||||| ||||    
T  22863557 ttagaaatcgtggttgggcctaacacaaccccacaaaa 22863520  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 263 - 300
Target Start/End: Complemental strand, 35788977 - 35788940
Alignment:
Q  263 ttagaaatcgtggttgggcttaacacaaccccataaaa 300  Q
    ||||||||||||||||||| ||||||||||||| ||||    
T  35788977 ttagaaatcgtggttgggcctaacacaaccccacaaaa 35788940  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 250 - 295
Target Start/End: Original strand, 40716609 - 40716654
Alignment:
Q  250 ctctgataccattttagaaatcgtggttgggcttaacacaacccca 295  Q
    |||||||||||| ||||||| | ||||||||| |||||||||||||    
T  40716609 ctctgataccatcttagaaaccatggttgggcctaacacaacccca 40716654  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 263 - 308
Target Start/End: Original strand, 41187933 - 41187978
Alignment:
Q  263 ttagaaatcgtggttgggcttaacacaaccccataaaatcaacttg 308  Q
    ||||||||||||||||||| |||| |||||||| |||| |||||||    
T  41187933 ttagaaatcgtggttgggcataactcaaccccacaaaaccaacttg 41187978  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 263 - 300
Target Start/End: Original strand, 54054806 - 54054843
Alignment:
Q  263 ttagaaatcgtggttgggcttaacacaaccccataaaa 300  Q
    ||||||||||||||||||| ||||||||||||| ||||    
T  54054806 ttagaaatcgtggttgggcctaacacaaccccacaaaa 54054843  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 250 - 302
Target Start/End: Complemental strand, 4464391 - 4464339
Alignment:
Q  250 ctctgataccattttagaaatcgtggttgggcttaacacaaccccataaaatc 302  Q
    |||||||||||| |||||| |||||||||||  ||||| ||||||| ||||||    
T  4464391 ctctgataccatcttagaattcgtggttgggtctaacaaaaccccacaaaatc 4464339  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 150 - 226
Target Start/End: Original strand, 13495581 - 13495657
Alignment:
Q  150 tcacgatcagcactattggaattggttcgtggacataaatagtgtgtggcctgataacagaaacctggtagcaggtg 226  Q
    |||||||||||| ||||||  ||| ||||||||||||||| |||  || ||||||| | |||||||| || ||||||    
T  13495581 tcacgatcagcattattgggcttgattcgtggacataaatggtggctgacctgatagccgaaacctgataacaggtg 13495657  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 157 - 300
Target Start/End: Complemental strand, 43743171 - 43743035
Alignment:
Q  157 cagcactattggaattggttcgtggacataaatagtgtgtggcctgataacagaaacctggtagcaggtgatctaatggatcttaattatagactctgat 256  Q
    ||||| ||||||  |||||||||||||||||||  || ||| ||||||     ||||||| ||||||||| || ||||||||||  | | || |||||||    
T  43743171 cagcattattgggtttggttcgtggacataaatgatgagtgacctgat-----aaacctgatagcaggtggtcaaatggatctt--tgagaggctctgat 43743079  T
Q  257 accattttagaaatcgtggttgggcttaacacaaccccataaaa 300  Q
    || || ||| ||||||||||| ||  ||||| ||||||| ||||    
T  43743078 actatcttataaatcgtggttaggtctaacataaccccaaaaaa 43743035  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 67; Significance: 1e-29; HSPs: 38)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 132 - 300
Target Start/End: Complemental strand, 4155537 - 4155370
Alignment:
Q  132 ggactcttaacacacc-tctcacgatcagcactattggaattggttcgtggacataaatagtgtgtggcctgataacagaaacctggtagcaggtgatct 230  Q
    |||||||||||||||| |||||||| ||||||||||||  ||||||||| ||||||||  ||| |||||| |||| | |||||||| |||||||||  |     
T  4155537 ggactcttaacacaccctctcacgaccagcactattgggcttggttcgtcgacataaacggtgggtggcccgatagcggaaacctgatagcaggtggccc 4155438  T
Q  231 aatggatcttaattatagactctgataccattttagaaatcgtggttgggcttaacacaaccccataaaa 300  Q
    |||| |||||    | ||||||||||||||| ||||||||||||||||||| ||||||||||||| ||||    
T  4155437 aatgaatctt--ggagagactctgataccatcttagaaatcgtggttgggcctaacacaaccccacaaaa 4155370  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 149 - 300
Target Start/End: Original strand, 13574809 - 13574959
Alignment:
Q  149 ctcacgatcagcactattggaattggttcgtggacataaatagtgtgtggcctgataacagaaacctggtagcaggtgatctaatggatcttaattatag 248  Q
    |||||||  |||||||||||  ||||||||||||||||||| ||| ||| |  |||| | |||||||| |||||||||  | |||||||||||| |  ||    
T  13574809 ctcacgactagcactattgggcttggttcgtggacataaatggtgggtgacacgatagcggaaacctgatagcaggtggcccaatggatcttaact-gag 13574907  T
Q  249 actctgataccattttagaaatcgtggttgggcttaacacaaccccataaaa 300  Q
     || ||||||||| |||||||| |||||||||| ||||||||||||| ||||    
T  13574908 gctttgataccatattagaaattgtggttgggcctaacacaaccccacaaaa 13574959  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 136 - 300
Target Start/End: Original strand, 20327724 - 20327887
Alignment:
Q  136 tcttaacacacct-ctcacgatcagcactattggaattggttcgtggacataaatagtgtgtggcctgataacagaaacctggtagcaggtgatctaatg 234  Q
    ||||||||||||  ||||||| || |||||||||  ||||||| ||||||||||| ||| |||||| |||| | |||||||| |||||||||  | ||||    
T  20327724 tcttaacacacccgctcacgaccaacactattgggcttggttcctggacataaatggtgggtggcccgatagcggaaacctgatagcaggtggcccaatg 20327823  T
Q  235 gatcttaattatagactctgataccattttagaaatcgtggttgggcttaacacaaccccataaaa 300  Q
    ||| |||   | || | |||||||||| ||||||||| ||||||||| ||||||||||||| ||||    
T  20327824 gatttta--gagaggcactgataccatattagaaatcatggttgggcctaacacaaccccacaaaa 20327887  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 132 - 300
Target Start/End: Original strand, 35038300 - 35038466
Alignment:
Q  132 ggactcttaacacacctc-tcacgatcagcactattggaattggttcgtggacataaatagtgtgtggcctgataacagaaacctggtagcaggtgatct 230  Q
    |||||||||||||||| | |||||| ||| ||||||||  ||||||||||||||||||| ||| |||||| |||| | |||||||| | |||||||  |     
T  35038300 ggactcttaacacaccccctcacgaccagtactattgggcttggttcgtggacataaatggtgggtggcc-gatagcggaaacctgattgcaggtggccc 35038398  T
Q  231 aatggatcttaattatagactctgataccattttagaaatcgtggttgggcttaacacaaccccataaaa 300  Q
    ||||||||||    | || | |||||||||| |||||| |||||||||||| ||||||||||||| ||||    
T  35038399 aatggatctt--ggagaggcactgataccatcttagaagtcgtggttgggcctaacacaaccccacaaaa 35038466  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 133 - 300
Target Start/End: Complemental strand, 16239804 - 16239637
Alignment:
Q  133 gactcttaacacacctc-tcacgatcagcactattggaattggttcgtggacataaatagtgtgtggcctgataacagaaacctggtagcaggtgatcta 231  Q
    ||||||||||||||| | |||||| || ||||||||   ||||||||||||||||||| ||| |||||  |||||| |||||||| |||||||||  | |    
T  16239804 gactcttaacacaccccctcacgaccatcactattgagcttggttcgtggacataaatggtgggtggctcgataacggaaacctgatagcaggtggccaa 16239705  T
Q  232 atggatcttaattatagactctgataccattttagaaatcgtggttgggcttaacacaaccccataaaa 300  Q
    | |||||||      || |||||||||||| ||||||||||||||||||| |||||||| |||| ||||    
T  16239704 acggatctt-ggaggaggctctgataccatcttagaaatcgtggttgggcctaacacaatcccacaaaa 16239637  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 132 - 300
Target Start/End: Complemental strand, 31317444 - 31317274
Alignment:
Q  132 ggactcttaacacacctc-tcacgatcagcactattggaattggttcgtggacataaatagtgtgtggcctgataacagaaacctggtagcaggtgatct 230  Q
    |||||||||||||||| | |||||| |||||||||||   ||||||||||||||||||| ||| |||||| ||||||| ||||||| ||| ||||| ||     
T  31317444 ggactcttaacacaccccctcacgaccagcactattgagtttggttcgtggacataaatggtgggtggcccgataaca-aaacctgatagtaggtggtcc 31317346  T
Q  231 aatggatcttaattatagactctgat---accattttagaaatcgtggttgggcttaacacaaccccataaaa 300  Q
    || |||||||    | ||||||||||   ||||| |||||||||||||||| || |||||||| |||| ||||    
T  31317345 aacggatctt-ggaagagactctgataccaccatcttagaaatcgtggttgagcctaacacaatcccacaaaa 31317274  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 160 - 300
Target Start/End: Original strand, 20303285 - 20303423
Alignment:
Q  160 cactattggaattggttcgtggacataaatagtgtgtggcctgataacagaaacctggtagcaggtgatctaatggatcttaattatagactctgatacc 259  Q
    |||||||||| ||||||||||||||||||| ||| |||| | ||||   |||||||| |||||||||  | ||||||| |||   | || ||||||||||    
T  20303285 cactattggacttggttcgtggacataaatggtgggtggaccgatagtggaaacctgatagcaggtggcccaatggatttta--gagaggctctgatacc 20303382  T
Q  260 attttagaaatcgtggttgggcttaacacaaccccataaaa 300  Q
    || |||||||| |||||||| | ||||||||||||| ||||    
T  20303383 atattagaaattgtggttggacctaacacaaccccacaaaa 20303423  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 171 - 300
Target Start/End: Original strand, 8142558 - 8142685
Alignment:
Q  171 ttggttcgtggacataaatagtgtgtggcctgataacagaaacctggtagcaggtgatctaatggatcttaattatagactctgataccattttagaaat 270  Q
    ||||||||||||||||||| ||| |||| |||||    |||| ||| |||||| ||| ||||||||| ||||  | || |||||||||||| ||||||||    
T  8142558 ttggttcgtggacataaatggtgggtggtctgattgaggaaatctgatagcagatgacctaatggattttaa--agaggctctgataccatcttagaaat 8142655  T
Q  271 cgtggttgggcttaacacaaccccataaaa 300  Q
    ||||||| | | ||||||||||||| ||||    
T  8142656 cgtggttagacctaacacaaccccacaaaa 8142685  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 136 - 237
Target Start/End: Original strand, 20303174 - 20303276
Alignment:
Q  136 tcttaacacacct-ctcacgatcagcactattggaattggttcgtggacataaatagtgtgtggcctgataacagaaacctggtagcaggtgatctaatg 234  Q
    ||||||||||||  ||||||| ||||||| ||||| ||||||||||||||||||| ||| |||| | |||| | |||||||| |||||||||| | ||||    
T  20303174 tcttaacacacccgctcacgaccagcactgttggacttggttcgtggacataaatggtgggtggaccgatagcggaaacctgatagcaggtgacccaatg 20303273  T
Q  235 gat 237  Q
    |||    
T  20303274 gat 20303276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 247 - 300
Target Start/End: Original strand, 16926934 - 16926987
Alignment:
Q  247 agactctgataccattttagaaatcgtggttgggcttaacacaaccccataaaa 300  Q
    ||||||||||||||| |||||||||||||||| |||||||||||||||| ||||    
T  16926934 agactctgataccatcttagaaatcgtggttgagcttaacacaaccccacaaaa 16926987  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 132 - 226
Target Start/End: Complemental strand, 34992819 - 34992724
Alignment:
Q  132 ggactcttaacacacctc-tcacgatcagcactattggaattggttcgtggacataaatagtgtgtggcctgataacagaaacctggtagcaggtg 226  Q
    |||||||||||||||| | |||||| ||||||||||||  ||||||||||||||||||| ||| ||| || || | | |||||||| |||||||||    
T  34992819 ggactcttaacacaccccctcacgaccagcactattgggcttggttcgtggacataaatggtgggtgacccgacagcggaaacctgatagcaggtg 34992724  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 250 - 300
Target Start/End: Original strand, 1723064 - 1723114
Alignment:
Q  250 ctctgataccattttagaaatcgtggttgggcttaacacaaccccataaaa 300  Q
    |||||||||||| ||||||||||||||||||| ||||||||||||| ||||    
T  1723064 ctctgataccatcttagaaatcgtggttgggcctaacacaaccccacaaaa 1723114  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 250 - 300
Target Start/End: Complemental strand, 11589881 - 11589831
Alignment:
Q  250 ctctgataccattttagaaatcgtggttgggcttaacacaaccccataaaa 300  Q
    |||||||||||| ||||||||||||||||||| ||||||||||||| ||||    
T  11589881 ctctgataccatattagaaatcgtggttgggcctaacacaaccccacaaaa 11589831  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 250 - 296
Target Start/End: Complemental strand, 21833444 - 21833398
Alignment:
Q  250 ctctgataccattttagaaatcgtggttgggcttaacacaaccccat 296  Q
    |||||||||||| ||||||||||||||||||| ||||||||||||||    
T  21833444 ctctgataccatgttagaaatcgtggttgggcctaacacaaccccat 21833398  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 131 - 189
Target Start/End: Original strand, 29215694 - 29215752
Alignment:
Q  131 tggactcttaacacacctctcacgatcagcactattggaattggttcgtggacataaat 189  Q
    ||||||||||||||||| ||||||| || |||||||||  |||||||||||||||||||    
T  29215694 tggactcttaacacacccctcacgaccaacactattgggtttggttcgtggacataaat 29215752  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 250 - 300
Target Start/End: Complemental strand, 54368612 - 54368562
Alignment:
Q  250 ctctgataccattttagaaatcgtggttgggcttaacacaaccccataaaa 300  Q
    |||||||||||| ||||||||||||||||||  ||||||||||||||||||    
T  54368612 ctctgataccatcttagaaatcgtggttgggtctaacacaaccccataaaa 54368562  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 250 - 300
Target Start/End: Complemental strand, 54567988 - 54567938
Alignment:
Q  250 ctctgataccattttagaaatcgtggttgggcttaacacaaccccataaaa 300  Q
    |||||||||||| ||||||||||||||||||| ||||||||||||| ||||    
T  54567988 ctctgataccatcttagaaatcgtggttgggcctaacacaaccccacaaaa 54567938  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 251 - 300
Target Start/End: Complemental strand, 9273056 - 9273007
Alignment:
Q  251 tctgataccattttagaaatcgtggttgggcttaacacaaccccataaaa 300  Q
    ||||||||||| |||||||| |||||||||||||||||||||||| ||||    
T  9273056 tctgataccatattagaaatggtggttgggcttaacacaaccccacaaaa 9273007  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 132 - 216
Target Start/End: Original strand, 39683374 - 39683459
Alignment:
Q  132 ggactcttaacacac-ctctcacgatcagcactattggaattggttcgtggacataaatagtgtgtggcctgataacagaaacctg 216  Q
    ||||||||||||||  | ||||||| ||||| ||||||  ||||||||||||||||||| ||| |||||| |||| ||||||||||    
T  39683374 ggactcttaacacagtccctcacgaccagcattattgggcttggttcgtggacataaatggtgggtggcccgatagcagaaacctg 39683459  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 132 - 240
Target Start/End: Original strand, 19954324 - 19954432
Alignment:
Q  132 ggactcttaacacacctctcacgatcagcactattggaattggttcgtggacataaatagtgtgtggcctgataacagaaacctggtagcaggtgatcta 231  Q
    ||||||||||||| || ||||||| ||| ||||||||  ||||||||||||||||||| ||| |||| | |||| |  ||||||| |||||| ||  | |    
T  19954324 ggactcttaacacccccctcacgaccagtactattgggcttggttcgtggacataaatggtgggtggtcagatagcgaaaacctgatagcagatggccca 19954423  T
Q  232 atggatctt 240  Q
    |||||||||    
T  19954424 atggatctt 19954432  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 247 - 302
Target Start/End: Original strand, 17001406 - 17001461
Alignment:
Q  247 agactctgataccattttagaaatcgtggttgggcttaacacaaccccataaaatc 302  Q
    ||||||||||||||||||||||||| ||||||| | |||||| |||||| ||||||    
T  17001406 agactctgataccattttagaaatcatggttggacctaacactaccccacaaaatc 17001461  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 263 - 300
Target Start/End: Complemental strand, 39620409 - 39620372
Alignment:
Q  263 ttagaaatcgtggttgggcttaacacaaccccataaaa 300  Q
    ||||||||||||||||||||||||||||||||| ||||    
T  39620409 ttagaaatcgtggttgggcttaacacaaccccacaaaa 39620372  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 250 - 294
Target Start/End: Complemental strand, 17638330 - 17638286
Alignment:
Q  250 ctctgataccattttagaaatcgtggttgggcttaacacaacccc 294  Q
    |||| ||||||| ||||||||||||||||||| ||||||||||||    
T  17638330 ctcttataccatcttagaaatcgtggttgggcctaacacaacccc 17638286  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 132 - 227
Target Start/End: Original strand, 52724092 - 52724188
Alignment:
Q  132 ggactcttaacacacctct-cacgatcagcactattggaattggttcgtggacataaatagtgtgtggcctgataacagaaacctggtagcaggtga 227  Q
    ||||||||||||||||||| |||||||| |||||| |   ||||||| ||||||||||| ||| |||||| |||| |  ||||||| ||||| ||||    
T  52724092 ggactcttaacacacctcttcacgatcaacactatcgagtttggttcatggacataaatggtgggtggcccgatagcgaaaacctgatagcatgtga 52724188  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 253 - 300
Target Start/End: Original strand, 12930119 - 12930166
Alignment:
Q  253 tgataccattttagaaatcgtggttgggcttaacacaaccccataaaa 300  Q
    ||||||||| |||||||| |||||||||| ||||||||||||| ||||    
T  12930119 tgataccatcttagaaatggtggttgggcctaacacaaccccacaaaa 12930166  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 247 - 293
Target Start/End: Complemental strand, 27783157 - 27783111
Alignment:
Q  247 agactctgataccattttagaaatcgtggttgggcttaacacaaccc 293  Q
    ||||||||||||||| ||||||||| || |||||| |||||||||||    
T  27783157 agactctgataccatcttagaaatcatgattgggcctaacacaaccc 27783111  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 147 - 205
Target Start/End: Original strand, 29575792 - 29575850
Alignment:
Q  147 ctctcacgatcagcactattggaattggttcgtggacataaatagtgtgtggcctgata 205  Q
    |||||||||  || ||||||||  ||||||||| ||||||||||||| |||||||||||    
T  29575792 ctctcacgacaagtactattgggcttggttcgtagacataaatagtgggtggcctgata 29575850  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 250 - 300
Target Start/End: Original strand, 45138959 - 45139009
Alignment:
Q  250 ctctgataccattttagaaatcgtggttgggcttaacacaaccccataaaa 300  Q
    |||||||||||| ||||||||||||||||||  | ||||||||||| ||||    
T  45138959 ctctgataccatcttagaaatcgtggttgggtcttacacaaccccacaaaa 45139009  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 259 - 300
Target Start/End: Original strand, 20327611 - 20327652
Alignment:
Q  259 cattttagaaatcgtggttgggcttaacacaaccccataaaa 300  Q
    ||||||| ||||||||||||||| ||||||||||||| ||||    
T  20327611 cattttaaaaatcgtggttgggcctaacacaaccccacaaaa 20327652  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 251 - 292
Target Start/End: Complemental strand, 22729195 - 22729154
Alignment:
Q  251 tctgataccattttagaaatcgtggttgggcttaacacaacc 292  Q
    ||||||||||| |||||||| |||||||||| ||||||||||    
T  22729195 tctgataccatcttagaaattgtggttgggcctaacacaacc 22729154  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 263 - 300
Target Start/End: Complemental strand, 24866280 - 24866243
Alignment:
Q  263 ttagaaatcgtggttgggcttaacacaaccccataaaa 300  Q
    ||||||||||||||||||| ||||||||||||| ||||    
T  24866280 ttagaaatcgtggttgggcctaacacaaccccacaaaa 24866243  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 263 - 300
Target Start/End: Original strand, 35038195 - 35038232
Alignment:
Q  263 ttagaaatcgtggttgggcttaacacaaccccataaaa 300  Q
    ||||||||||||||||||| ||||||||||||| ||||    
T  35038195 ttagaaatcgtggttgggcctaacacaaccccacaaaa 35038232  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 250 - 291
Target Start/End: Complemental strand, 39620188 - 39620147
Alignment:
Q  250 ctctgataccattttagaaatcgtggttgggcttaacacaac 291  Q
    |||||||||||| ||||||||||||||||  |||||||||||    
T  39620188 ctctgataccatcttagaaatcgtggttgaacttaacacaac 39620147  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 263 - 300
Target Start/End: Original strand, 47702410 - 47702447
Alignment:
Q  263 ttagaaatcgtggttgggcttaacacaaccccataaaa 300  Q
    ||||||||||||||||||| ||||||||||||| ||||    
T  47702410 ttagaaatcgtggttgggcctaacacaaccccacaaaa 47702447  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 263 - 300
Target Start/End: Original strand, 50052540 - 50052577
Alignment:
Q  263 ttagaaatcgtggttgggcttaacacaaccccataaaa 300  Q
    ||||||||||||||||||| ||||||||||||| ||||    
T  50052540 ttagaaatcgtggttgggcctaacacaaccccacaaaa 50052577  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 264 - 300
Target Start/End: Original strand, 13574686 - 13574722
Alignment:
Q  264 tagaaatcgtggttgggcttaacacaaccccataaaa 300  Q
    |||||||||||||||||| ||||||||||||| ||||    
T  13574686 tagaaatcgtggttgggcctaacacaaccccacaaaa 13574722  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 250 - 302
Target Start/End: Original strand, 15019504 - 15019556
Alignment:
Q  250 ctctgataccattttagaaatcgtggttgggcttaacacaaccccataaaatc 302  Q
    |||| ||||||| ||||||||||||||||  | |||||||||| |||||||||    
T  15019504 ctctaataccatcttagaaatcgtggttgaacataacacaacctcataaaatc 15019556  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 150 - 300
Target Start/End: Complemental strand, 49629800 - 49629651
Alignment:
Q  150 tcacgatcagcactattggaattggttcgtggacataaatagtgtgtggc-ctgataacagaaacctggtagcaggtgatctaatggatcttaattatag 248  Q
    |||||| || |||||||||  ||||||  ||||||||||| ||| |  || | |||| |||||||||| ||||||||| || |||||||||| |  | ||    
T  49629800 tcacgaccaacactattgggcttggtttatggacataaatggtgggatgctccgatagcagaaacctgatagcaggtggtccaatggatcttga--agag 49629703  T
Q  249 actctgataccattttagaaatcgtggttgggcttaacacaaccccataaaa 300  Q
     |||| ||||||||||| |||| ||  |||||  ||||||||||||| ||||    
T  49629702 gctctaataccattttaaaaatggtaattgggtctaacacaaccccacaaaa 49629651  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 67; Significance: 1e-29; HSPs: 39)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 132 - 300
Target Start/End: Original strand, 15124654 - 15124821
Alignment:
Q  132 ggactcttaacaca-cctctcacgatcagcactattggaattggttcgtggacataaatagtgtgtggcctgataacagaaacctggtagcaggtgatct 230  Q
    |||||||||||||| || ||||| | ||||||||||||| ||||||||||||||||||| |||  || || ||||||  ||||||| ||||||||| ||     
T  15124654 ggactcttaacacatcccctcacaaccagcactattggacttggttcgtggacataaatggtggatgacccgataacgaaaacctgatagcaggtggtcc 15124753  T
Q  231 aatggatcttaattatagactctgataccattttagaaatcgtggttgggcttaacacaaccccataaaa 300  Q
    ||||||||||    | ||||||||||||||| ||||||||||||||||||  ||||||||||||| ||||    
T  15124754 aatggatctt--ggagagactctgataccatcttagaaatcgtggttgggtctaacacaaccccacaaaa 15124821  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 133 - 290
Target Start/End: Original strand, 40149110 - 40149264
Alignment:
Q  133 gactcttaacacacctctcacgatcagcactattggaattggttcgtggacataaatagtgtgtggcctgataacagaaacctggtagcaggtgatctaa 232  Q
    ||||||||||||||| ||||||| ||||||||||||  ||||||||||||||||||||||| |||| | |||| | |||| ||| |||||||||| | ||    
T  40149110 gactcttaacacacc-ctcacgaccagcactattgggcttggttcgtggacataaatagtgggtggtccgatagctgaaatctgatagcaggtgacccaa 40149208  T
Q  233 tggatcttaattatagactctgataccattttagaaatcgtggttgggcttaacacaa 290  Q
    |||||||| |  | || |||||||||||| |||||||| |||||||||| ||||||||    
T  40149209 tggatcttga--agaggctctgataccatcttagaaattgtggttgggcctaacacaa 40149264  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 132 - 300
Target Start/End: Original strand, 40379315 - 40379482
Alignment:
Q  132 ggactcttaacacacctc-tcacgatcagcactattggaattggttcgtggacataaatagtgtgtggcctgataacagaaacctggtagcaggtgatct 230  Q
    |||||||||||||||||| |||||| ||||||| ||||  |||||||||||| |||||| ||| |||||| ||||   |||||||| |||||||||  ||    
T  40379315 ggactcttaacacacctcctcacgaccagcacttttgggcttggttcgtggatataaatggtgggtggcccgatagaggaaacctgatagcaggtggcct 40379414  T
Q  231 aatggatcttaattatagactctgataccattttagaaatcgtggttgggcttaacacaaccccataaaa 300  Q
    ||||||||||    | || |||||||||||| ||||||||||||||||||| ||||||||||||| ||||    
T  40379415 aatggatctt--ggaaaggctctgataccatcttagaaatcgtggttgggcctaacacaaccccacaaaa 40379482  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 132 - 300
Target Start/End: Complemental strand, 16533525 - 16533358
Alignment:
Q  132 ggactcttaacacacc-tctcacgatcagcactattggaattggttcgtggacataaatagtgtgtggcctgataacagaaacctggtagcaggtgatct 230  Q
    |||||||||||||||| |||||||| ||||||||||||  ||||||||||||||||||| ||| |||||| |||| |  ||||||| ||||||||   |     
T  16533525 ggactcttaacacaccctctcacgaccagcactattggccttggttcgtggacataaatggtgggtggcccgatagcgaaaacctgatagcaggtagccc 16533426  T
Q  231 aatggatcttaattatagactctgataccattttagaaatcgtggttgggcttaacacaaccccataaaa 300  Q
    |||||||||| |  | || ||||||||||||||||||| |||| ||||||  |||||||||| |||||||    
T  16533425 aatggatcttga--agaggctctgataccattttagaagtcgtagttgggtgtaacacaacctcataaaa 16533358  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 62; E-Value: 9e-27
Query Start/End: Original strand, 132 - 300
Target Start/End: Original strand, 5711545 - 5711713
Alignment:
Q  132 ggactcttaacacacctc-tcacgatcagcactattggaattggttcgtggacataaatagtgtgtggcctgataacagaaacctggtagcaggtgatct 230  Q
    |||||||||||||||| | |||||| ||||||||||||  ||||||||||||||||||| ||| |||||| |||||| |||||||| ||||||||| ||     
T  5711545 ggactcttaacacaccccctcacgaccagcactattgggcttggttcgtggacataaatggtgggtggcccgataacggaaacctgatagcaggtggtcc 5711644  T
Q  231 aatggatcttaattatagactctgataccattttagaaatcgtggttgggcttaacacaaccccataaaa 300  Q
    || |||||||      || ||||||||| || |||||||| |||||||||| ||||||||||||| ||||    
T  5711645 aacggatctt-ggaggaggctctgatactatcttagaaatggtggttgggcctaacacaaccccacaaaa 5711713  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 59; E-Value: 6e-25
Query Start/End: Original strand, 132 - 300
Target Start/End: Complemental strand, 2029982 - 2029815
Alignment:
Q  132 ggactcttaacacacctc-tcacgatcagcactattggaattggttcgtggacataaatagtgtgtggcctgataacagaaacctggtagcaggtgatct 230  Q
    |||||||||||||||| | |||||| ||||||||||||  ||||||||||||||||||| ||| |||| | |||| | |||||||  |||||||||  |     
T  2029982 ggactcttaacacaccccctcacgaccagcactattgggcttggttcgtggacataaatggtgggtggtccgatagcggaaacctaatagcaggtggccc 2029883  T
Q  231 aatggatcttaattatagactctgataccattttagaaatcgtggttgggcttaacacaaccccataaaa 300  Q
    ||||||||||    | || |||||||||||| ||||||||||||||||||| ||| ||||||||| ||||    
T  2029882 aatggatctt--ggagaggctctgataccatcttagaaatcgtggttgggcctaaaacaaccccacaaaa 2029815  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 59; E-Value: 6e-25
Query Start/End: Original strand, 132 - 300
Target Start/End: Complemental strand, 16419480 - 16419313
Alignment:
Q  132 ggactcttaacacacctc-tcacgatcagcactattggaattggttcgtggacataaatagtgtgtggcctgataacagaaacctggtagcaggtgatct 230  Q
    |||||||||||||||| | |||||| |||||||||||   ||||||||||||||||||| ||| |||||  |||| | |||||||| |||||||||  |     
T  16419480 ggactcttaacacaccccctcacgaccagcactattgagcttggttcgtggacataaatggtgggtggctcgatagcggaaacctgatagcaggtggccc 16419381  T
Q  231 aatggatcttaattatagactctgataccattttagaaatcgtggttgggcttaacacaaccccataaaa 300  Q
    ||||||||||    | || |||||||||||| ||||||||||||||||||| ||| ||||||||| ||||    
T  16419380 aatggatctt--ggagaggctctgataccatcttagaaatcgtggttgggcctaatacaaccccacaaaa 16419313  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 57; E-Value: 9e-24
Query Start/End: Original strand, 134 - 300
Target Start/End: Original strand, 14466283 - 14466448
Alignment:
Q  134 actcttaacacacctc-tcacgatcagcactattggaattggttcgtggacataaatagtgtgtggcctgataacagaaacctggtagcaggtgatctaa 232  Q
    |||||||||||||| | |||||| ||||||||||||  ||||||||||||||||||| ||| |||||| |||| | |||||||| || || |||  | ||    
T  14466283 actcttaacacaccccctcacgaccagcactattgggcttggttcgtggacataaatggtgggtggcccgatagcggaaacctgataacaagtggcccaa 14466382  T
Q  233 tggatcttaattatagactctgataccattttagaaatcgtggttgggcttaacacaaccccataaaa 300  Q
    ||||||||    | || |||||||||||| |||||||| |||||||||| ||||||||||||| ||||    
T  14466383 tggatctt--ggagaggctctgataccatcttagaaatggtggttgggcctaacacaaccccacaaaa 14466448  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 132 - 300
Target Start/End: Original strand, 93228 - 93392
Alignment:
Q  132 ggactcttaacacacctctcacgatcagcactattggaattggttcgtggacataaatagtgtgtggcctgataacagaaacctggtagcaggtgatcta 231  Q
    |||||||||||||||| |  |||| ||||||||||||  ||| ||||||||||||| | ||| |||||| |||||| |||| ||| |||||||||  | |    
T  93228 ggactcttaacacacccc--acgaccagcactattgggcttgattcgtggacataattggtgggtggcccgataacggaaagctgatagcaggtggccca 93325  T
Q  232 atggatcttaattatagactctgataccattttagaaatcgtggttgggcttaacacaaccccataaaa 300  Q
    |||||||||    | || |||||||||||| ||| ||||||||||||||| ||||||||||||| ||||    
T  93326 atggatctt--ggagaggctctgataccatcttaaaaatcgtggttgggcctaacacaaccccacaaaa 93392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 132 - 300
Target Start/End: Original strand, 33606160 - 33606327
Alignment:
Q  132 ggactcttaacacacctc-tcacgatcagcactattggaattggttcgtggacataaatagtgtgtggcctgataacagaaacctggtagcaggtgatct 230  Q
    |||||||||||||||| | |||||| || ||||||| |  ||||||||||||||||||| ||| ||||||||||| | |||||||| ||||| |||| |     
T  33606160 ggactcttaacacaccacctcacgaccatcactattaggcttggttcgtggacataaatggtgggtggcctgatagcggaaacctgatagcaagtgaccc 33606259  T
Q  231 aatggatcttaattatagactctgataccattttagaaatcgtggttgggcttaacacaaccccataaaa 300  Q
    ||| |||||| |  | ||||| ||||| ||| |||||||||||||||| || ||||| ||| ||| ||||    
T  33606260 aatagatcttga--agagactttgatatcatcttagaaatcgtggttgtgcctaacataacgccacaaaa 33606327  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 132 - 240
Target Start/End: Original strand, 37812374 - 37812483
Alignment:
Q  132 ggactcttaacacacctc-tcacgatcagcactattggaattggttcgtggacataaatagtgtgtggcctgataacagaaacctggtagcaggtgatct 230  Q
    |||||||||||||||| | |||||| ||||| ||||||  |||||||||||||||||| |||| |||||| |||| |||||||||| |||||||||  |     
T  37812374 ggactcttaacacaccccctcacgaccagcattattgggcttggttcgtggacataaacagtgggtggcccgatagcagaaacctgatagcaggtggccc 37812473  T
Q  231 aatggatctt 240  Q
    ||||||||||    
T  37812474 aatggatctt 37812483  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 195 - 300
Target Start/End: Original strand, 93562 - 93665
Alignment:
Q  195 gtggcctgataacagaaacctggtagcaggtgatctaatggatcttaattatagactctgataccattttagaaatcgtggttgggcttaacacaacccc 294  Q
    |||||| |||||| |||||||| ||| |||||| | ||||||||||    | ||  ||||||||||| ||||||||||||||||||| ||||||||||||    
T  93562 gtggcccgataacggaaacctgatagtaggtgacccaatggatcttgg--aaaggttctgataccatcttagaaatcgtggttgggcctaacacaacccc 93659  T
Q  295 ataaaa 300  Q
    | ||||    
T  93660 acaaaa 93665  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 247 - 300
Target Start/End: Complemental strand, 21591881 - 21591828
Alignment:
Q  247 agactctgataccattttagaaatcgtggttgggcttaacacaaccccataaaa 300  Q
    |||||||| |||||  ||||||||||||||||||| ||||||||||||||||||    
T  21591881 agactctgctaccaacttagaaatcgtggttgggcctaacacaaccccataaaa 21591828  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 133 - 240
Target Start/End: Original strand, 44404033 - 44404142
Alignment:
Q  133 gactcttaacacacctc-tcacgatcagcactattggaattggttcgtggacataaatagtgtgtggcctgata-acagaaacctggtagcaggtgatct 230  Q
    ||||||||||||||| | |||||| || |||||||||  ||||||| ||||||||||||||| ||| || ||||  | |||||||| ||||||||| ||     
T  44404033 gactcttaacacaccccatcacgaccaacactattgggcttggttcatggacataaatagtgggtgacccgataggcggaaacctgatagcaggtggtcc 44404132  T
Q  231 aatggatctt 240  Q
    ||||||||||    
T  44404133 aatggatctt 44404142  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 133 - 240
Target Start/End: Complemental strand, 19110455 - 19110347
Alignment:
Q  133 gactcttaacacac-ctctcacgatcagcactattggaattggttcgtggacataaatagtgtgtggcctgataacagaaacctggtagcaggtgatcta 231  Q
    |||||||||||||| |||||||||||||||||||||   ||||||||||| |||||||  ||  ||||| |||| || ||||||  |||||||||| | |    
T  19110455 gactcttaacacacactctcacgatcagcactattgagcttggttcgtgggcataaatgatgaatggcccgatagcaaaaacctaatagcaggtgaccca 19110356  T
Q  232 atggatctt 240  Q
    | |||||||    
T  19110355 acggatctt 19110347  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 249 - 300
Target Start/End: Complemental strand, 10571067 - 10571016
Alignment:
Q  249 actctgataccattttagaaatcgtggttgggcttaacacaaccccataaaa 300  Q
    ||||||||||||| |||||||||||||||| || ||||||||||||| ||||    
T  10571067 actctgataccatcttagaaatcgtggttgagcctaacacaaccccacaaaa 10571016  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 250 - 300
Target Start/End: Complemental strand, 2324336 - 2324286
Alignment:
Q  250 ctctgataccattttagaaatcgtggttgggcttaacacaaccccataaaa 300  Q
    |||||||||||| ||| ||||||||||||||| ||||||||||||| ||||    
T  2324336 ctctgataccatattaaaaatcgtggttgggcctaacacaaccccacaaaa 2324286  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 250 - 300
Target Start/End: Complemental strand, 5509175 - 5509125
Alignment:
Q  250 ctctgataccattttagaaatcgtggttgggcttaacacaaccccataaaa 300  Q
    |||||||||||| ||||||||| ||||||||| ||||||||||||| ||||    
T  5509175 ctctgataccatattagaaatcatggttgggcctaacacaaccccacaaaa 5509125  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 133 - 226
Target Start/End: Original strand, 17525206 - 17525300
Alignment:
Q  133 gactcttaacacacct-ctcacgatcagcactattggaattggttcgtggacataaatagtgtgtggcctgataacagaaacctggtagcaggtg 226  Q
    |||| ||||||||||  ||||||| || |||||||||  ||||||||||||||||||| ||| |||||| |||| | || ||||| |||||||||    
T  17525206 gacttttaacacacccactcacgaccatcactattgggcttggttcgtggacataaatggtgggtggcccgatagcggatacctgatagcaggtg 17525300  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 250 - 300
Target Start/End: Original strand, 28407781 - 28407831
Alignment:
Q  250 ctctgataccattttagaaatcgtggttgggcttaacacaaccccataaaa 300  Q
    |||||||||||| ||||||||||||||||||| ||||||||| ||| ||||    
T  28407781 ctctgataccatcttagaaatcgtggttgggcctaacacaactccacaaaa 28407831  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 133 - 300
Target Start/End: Original strand, 36352033 - 36352197
Alignment:
Q  133 gactcttaacacacctc-tcacgatcagcactattggaattggttcgtggacataaatagtgtgtggcctgataacagaaacctggtagcaggtgatcta 231  Q
    ||||||||||||||| | |||||| || |||||||||  || |||||||||  ||||| ||| |||||| |||||| |||||||| || ||||||  |      
T  36352033 gactcttaacacaccccatcacgaccaacactattgggcttcgttcgtgga--taaatggtgggtggcccgataacggaaacctgataacaggtggcccg 36352130  T
Q  232 atggatcttaattatagactctgataccattttagaaatcgtggttgggcttaacacaaccccataaaa 300  Q
    ||||||||| |  | ||||||| ||||||| ||| |||| |||||||  | ||||||||||||| ||||    
T  36352131 atggatcttga--agagactctaataccatcttaaaaattgtggttgaacctaacacaaccccacaaaa 36352197  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 255 - 300
Target Start/End: Complemental strand, 10523110 - 10523065
Alignment:
Q  255 ataccattttagaaatcgtggttgggcttaacacaaccccataaaa 300  Q
    ||||||||||||||||||||||||||| |||||||| |||| ||||    
T  10523110 ataccattttagaaatcgtggttgggcctaacacaatcccacaaaa 10523065  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 247 - 300
Target Start/End: Original strand, 27897591 - 27897644
Alignment:
Q  247 agactctgataccattttagaaatcgtggttgggcttaacacaaccccataaaa 300  Q
    ||||| ||||||||| |||||||| |||||||||| ||||||||||||| ||||    
T  27897591 agactttgataccatcttagaaatggtggttgggcctaacacaaccccacaaaa 27897644  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 250 - 302
Target Start/End: Complemental strand, 24395959 - 24395907
Alignment:
Q  250 ctctgataccattttagaaatcgtggttgggcttaacacaaccccataaaatc 302  Q
    |||||||||| | ||||||||||||||| ||| ||||||||||||| ||||||    
T  24395959 ctctgataccctcttagaaatcgtggtttggcctaacacaaccccacaaaatc 24395907  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 261 - 300
Target Start/End: Complemental strand, 5594325 - 5594286
Alignment:
Q  261 ttttagaaatcgtggttgggcttaacacaaccccataaaa 300  Q
    |||||||||||||||||| |||||||||||| ||||||||    
T  5594325 ttttagaaatcgtggttgagcttaacacaactccataaaa 5594286  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 250 - 293
Target Start/End: Original strand, 27036403 - 27036446
Alignment:
Q  250 ctctgataccattttagaaatcgtggttgggcttaacacaaccc 293  Q
    |||||||||||| ||||||||| ||||||||| |||||||||||    
T  27036403 ctctgataccatattagaaatcatggttgggcctaacacaaccc 27036446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 261 - 300
Target Start/End: Original strand, 30701124 - 30701163
Alignment:
Q  261 ttttagaaatcgtggttgggcttaacacaaccccataaaa 300  Q
    |||||||||| |||||||||||||||||||||||| ||||    
T  30701124 ttttagaaattgtggttgggcttaacacaaccccacaaaa 30701163  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 158 - 240
Target Start/End: Original strand, 18607142 - 18607224
Alignment:
Q  158 agcactattggaattggttcgtggacataaatagtgtgtggcctgataacagaaacctggtagcaggtgatctaatggatctt 240  Q
    |||||||||||  ||||||||| ||||||||| ||| || ||| |||||| |||||||| ||||| |||  | ||||||||||    
T  18607142 agcactattgggcttggttcgtagacataaatggtgggttgcccgataacggaaacctgatagcatgtggcccaatggatctt 18607224  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 250 - 300
Target Start/End: Original strand, 21383658 - 21383708
Alignment:
Q  250 ctctgataccattttagaaatcgtggttgggcttaacacaaccccataaaa 300  Q
    |||||||||||| ||||||||||||||||||| |||| ||| |||| ||||    
T  21383658 ctctgataccatcttagaaatcgtggttgggcctaactcaatcccacaaaa 21383708  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 250 - 300
Target Start/End: Complemental strand, 29718424 - 29718374
Alignment:
Q  250 ctctgataccattttagaaatcgtggttgggcttaacacaaccccataaaa 300  Q
    |||||||||||  ||||||||||||||| ||| ||||||||||||| ||||    
T  29718424 ctctgataccaacttagaaatcgtggttaggcctaacacaaccccacaaaa 29718374  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 149 - 292
Target Start/End: Original strand, 33381077 - 33381221
Alignment:
Q  149 ctcacgatcagcactattggaattggttcgtggacataaatagtgtgtggcctga--taacagaaacctggtagcaggtgatctaatggatcttaattat 246  Q
    ||||||| |||||||| |||  |||||||||||||||||||  || ||| |  ||  || |||||||||| ||||| |||  |||||| ||||| |        
T  33381077 ctcacgaccagcactactgggtttggttcgtggacataaatgatgggtgactcgagatagcagaaacctgttagcatgtggcctaatgaatcttgaagg- 33381175  T
Q  247 agactctgataccattttagaaatcgtggttgggcttaacacaacc 292  Q
    ||||||| ||||||| ||||||||||||||||||  ||||||||||    
T  33381176 agactctaataccatcttagaaatcgtggttgggactaacacaacc 33381221  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 263 - 300
Target Start/End: Original strand, 5711440 - 5711477
Alignment:
Q  263 ttagaaatcgtggttgggcttaacacaaccccataaaa 300  Q
    ||||||||||||||||||| ||||||||||||| ||||    
T  5711440 ttagaaatcgtggttgggcctaacacaaccccacaaaa 5711477  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 263 - 300
Target Start/End: Complemental strand, 8424971 - 8424934
Alignment:
Q  263 ttagaaatcgtggttgggcttaacacaaccccataaaa 300  Q
    |||||||||||||||| |||||||||||||||| ||||    
T  8424971 ttagaaatcgtggttgagcttaacacaaccccacaaaa 8424934  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 263 - 300
Target Start/End: Complemental strand, 16419585 - 16419548
Alignment:
Q  263 ttagaaatcgtggttgggcttaacacaaccccataaaa 300  Q
    ||||||||||||||||||| ||||||||||||| ||||    
T  16419585 ttagaaatcgtggttgggcctaacacaaccccacaaaa 16419548  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 263 - 300
Target Start/End: Complemental strand, 17719649 - 17719612
Alignment:
Q  263 ttagaaatcgtggttgggcttaacacaaccccataaaa 300  Q
    ||||||||||||||||||| ||||||||||||| ||||    
T  17719649 ttagaaatcgtggttgggcctaacacaaccccacaaaa 17719612  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 247 - 300
Target Start/End: Original strand, 17854914 - 17854967
Alignment:
Q  247 agactctgataccattttagaaatcgtggttgggcttaacacaaccccataaaa 300  Q
    ||||||||||| ||| ||||||||||||||||||  || |||||||||| ||||    
T  17854914 agactctgatatcatattagaaatcgtggttgggtctagcacaaccccacaaaa 17854967  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 263 - 300
Target Start/End: Original strand, 19191611 - 19191648
Alignment:
Q  263 ttagaaatcgtggttgggcttaacacaaccccataaaa 300  Q
    ||||||||||||||||||| ||||||||||||| ||||    
T  19191611 ttagaaatcgtggttgggcctaacacaaccccacaaaa 19191648  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 263 - 300
Target Start/End: Original strand, 40379210 - 40379247
Alignment:
Q  263 ttagaaatcgtggttgggcttaacacaaccccataaaa 300  Q
    ||||||||||||||||||| ||||||||||||| ||||    
T  40379210 ttagaaatcgtggttgggcctaacacaaccccacaaaa 40379247  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 263 - 303
Target Start/End: Complemental strand, 13486417 - 13486377
Alignment:
Q  263 ttagaaatcgtggttgggcttaacacaaccccataaaatca 303  Q
    ||||||||||||||| ||| ||||||||||||| |||||||    
T  13486417 ttagaaatcgtggttaggcctaacacaaccccacaaaatca 13486377  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 66; Significance: 4e-29; HSPs: 44)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 132 - 300
Target Start/End: Original strand, 41666863 - 41667031
Alignment:
Q  132 ggactcttaacacacctc-tcacgatcagcactattggaattggttcgtggacataaatagtgtgtggcctgataacagaaacctggtagcaggtgatct 230  Q
    |||||||||||||||| | |||||| ||||||||||||  ||||||||||||||||||| ||| |||||| |||||| |||||||| |||||||||  |     
T  41666863 ggactcttaacacaccccctcacgaccagcactattgggcttggttcgtggacataaatggtgggtggcccgataacggaaacctgatagcaggtggccc 41666962  T
Q  231 aatggatcttaattatagactctgataccattttagaaatcgtggttgggcttaacacaaccccataaaa 300  Q
    || |||||||      || |||||||||||| ||||||||||||||||||| ||||||||||||| ||||    
T  41666963 aacggatctt-ggaggaggctctgataccatcttagaaatcgtggttgggcctaacacaaccccacaaaa 41667031  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 62; E-Value: 9e-27
Query Start/End: Original strand, 136 - 300
Target Start/End: Original strand, 18333575 - 18333737
Alignment:
Q  136 tcttaacacacctctcacgatcagcactattggaattggttcgtggacataaatagtgtgtggcctgataacagaaacctggtagcaggtgatctaatgg 235  Q
    |||||||||||| ||||||| |||||||| |||  ||||||||||||||||||| ||| |||||| |||| |  ||||||| |||||||||  |  ||||    
T  18333575 tcttaacacacccctcacgaccagcactaatgggcttggttcgtggacataaatggtgggtggcccgatagcgaaaacctgatagcaggtggcccgatgg 18333674  T
Q  236 atcttaattatagactctgataccattttagaaatcgtggttgggcttaacacaaccccataaaa 300  Q
    ||||| |  | || |||||||||||| |||||| |||||||||||| ||||||||||||| ||||    
T  18333675 atcttga--agaggctctgataccatcttagaattcgtggttgggcctaacacaaccccacaaaa 18333737  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 137 - 302
Target Start/End: Complemental strand, 24531807 - 24531643
Alignment:
Q  137 cttaacacacctc-tcacgatcagcactattggaattggttcgtggacataaatagtgtgtggcctgataacagaaacctggtagcaggtgatctaatgg 235  Q
    ||||||||||| | |||||| ||||||||||||  |||||||||||||||||||  || ||||   ||||||||||| ||| |||||||||  | |||||    
T  24531807 cttaacacaccccctcacgaccagcactattgggcttggttcgtggacataaatgttgggtggttcgataacagaaaactgatagcaggtggcccaatgg 24531708  T
Q  236 atcttaattatagactctgataccattttagaaatcgtggttgggcttaacacaaccccataaaatc 302  Q
    ||| ||   | || |||||||||||| ||||||||||||||||||| ||||||||||||| ||||||    
T  24531707 atcatag--agaggctctgataccatcttagaaatcgtggttgggcataacacaaccccacaaaatc 24531643  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 59; E-Value: 6e-25
Query Start/End: Original strand, 132 - 300
Target Start/End: Complemental strand, 15480535 - 15480368
Alignment:
Q  132 ggactcttaacacacctc-tcacgatcagcactattggaattggttcgtggacataaatagtgtgtggcctgataacagaaacctggtagcaggtgatct 230  Q
    |||||||||||||||||| |||||| |||||| ||| |  ||||||| ||||||||||| ||| ||||||  ||| | |||||||| |||||||||  |     
T  15480535 ggactcttaacacacctcctcacgaccagcacgattaggcttggttcatggacataaatggtgggtggcccaatagcggaaacctgatagcaggtggccc 15480436  T
Q  231 aatggatcttaattatagactctgataccattttagaaatcgtggttgggcttaacacaaccccataaaa 300  Q
    |||||||||| |  | || |||||||||||| ||||||||||||||||||| ||||| ||||||| ||||    
T  15480435 aatggatcttga--agaggctctgataccatcttagaaatcgtggttgggcctaacagaaccccacaaaa 15480368  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 132 - 300
Target Start/End: Original strand, 24346607 - 24346775
Alignment:
Q  132 ggactcttaacacacctc-tcacgatcagcactattggaattggttcgtggacataaatagtgtgtggcctgataacagaaacctggtagcaggtgatct 230  Q
    |||||||||||||||| | |||||| |||||||||||   ||||||||||||||||||| ||| |||||| |||||| |||||||| |||||||||  |     
T  24346607 ggactcttaacacaccccctcacgaccagcactattgagcttggttcgtggacataaatggtgggtggcccgataacggaaacctgatagcaggtggccc 24346706  T
Q  231 aatggatcttaattatagactctgataccattttagaaatcgtggttgggcttaacacaaccccataaaa 300  Q
    ||||||||||      || |||||||||||| ||| ||||||||||||||  ||||||||||||| ||||    
T  24346707 aatggatctt-ggaggaggctctgataccatcttaaaaatcgtggttgggtctaacacaaccccacaaaa 24346775  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 57; E-Value: 9e-24
Query Start/End: Original strand, 133 - 287
Target Start/End: Original strand, 95373 - 95526
Alignment:
Q  133 gactcttaacacacctc-tcacgatcagcactattggaattggttcgtggacataaatagtgtgtggcctgataacagaaacctggtagcaggtgatcta 231  Q
    ||||||||||||||| | |||||| ||||||||||||  ||||||||||||||||||| ||| |||||| |||  | |||||||| |||||||||  | |    
T  95373 gactcttaacacaccccctcacgaccagcactattgggcttggttcgtggacataaatggtgggtggcccgatggcggaaacctgatagcaggtggccca 95472  T
Q  232 atggatcttaattatagactctgataccattttagaaatcgtggttgggcttaaca 287  Q
    |||||||||    | || |||||||||||| ||||||||||||||||||| |||||    
T  95473 atggatctt--ggagaggctctgataccatcttagaaatcgtggttgggcctaaca 95526  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 132 - 300
Target Start/End: Original strand, 24269976 - 24270143
Alignment:
Q  132 ggactcttaacacacctc-tcacgatcagcactattggaattggttcgtggacataaatagtgtgtggcctgataacagaaacctggtagcaggtgatct 230  Q
    |||||||||||||||| | |||||| |||||||||||   ||||||||||||||||||| ||| |||||| |||||| |||||||| |||||||||  |     
T  24269976 ggactcttaacacaccccctcacgaccagcactattgagcttggttcgtggacataaatggtgggtggcccgataacggaaacctgatagcaggtggccc 24270075  T
Q  231 aatggatcttaattatagactctgataccattttagaaatcgtggttgggcttaacacaaccccataaaa 300  Q
    ||||||||||      || |||||||||||| ||| ||||||||||||| | ||||||||||||| ||||    
T  24270076 aatggatctt-ggaggaggctctgataccatcttaaaaatcgtggttggtc-taacacaaccccacaaaa 24270143  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 132 - 300
Target Start/End: Original strand, 32908824 - 32908990
Alignment:
Q  132 ggactcttaacacacctctcacgatcagcactattggaattggttcgtggacataaatagtgtgtggcctgataacagaaacctggtagcaggtgatcta 231  Q
    |||||||||||||||| ||||||| ||||||||||||  ||||||||| ||||||||| ||| ||| || |||| |||||||||| |||||| ||  | |    
T  32908824 ggactcttaacacacccctcacgaccagcactattgggtttggttcgttgacataaatggtgggtgacccgatagcagaaacctgatagcagatggccca 32908923  T
Q  232 atggatcttaattatagactctgataccattttagaaatcgtggttgggcttaacacaaccccataaaa 300  Q
    ||||||||| |  | || |||| ||| ||| |||||||| ||||||| |  ||||||||||||| ||||    
T  32908924 atggatcttga--agaggctctaatatcatcttagaaattgtggttgagtctaacacaaccccacaaaa 32908990  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 132 - 300
Target Start/End: Complemental strand, 9368808 - 9368641
Alignment:
Q  132 ggactcttaacacacctc-tcacgatcagcactattggaattggttcgtggacataaatagtgtgtggcctgataacagaaacctggtagcaggtgatct 230  Q
    |||||||||| ||||| | |||||| ||||||||||||  |||||||||||||||| || ||| |||| |  ||| | |||||||| |||||||||  |     
T  9368808 ggactcttaagacaccccctcacgaccagcactattgggtttggttcgtggacatacatggtgggtggtccaatagcggaaacctgatagcaggtggccc 9368709  T
Q  231 aatggatcttaattatagactctgataccattttagaaatcgtggttgggcttaacacaaccccataaaa 300  Q
    |||||||||| |  | || |||||||||||  ||||||||  ||||||||| ||||||||||||| ||||    
T  9368708 aatggatcttga--agaggctctgataccaccttagaaattatggttgggcctaacacaaccccacaaaa 9368641  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 132 - 240
Target Start/End: Original strand, 13700696 - 13700805
Alignment:
Q  132 ggactcttaacacacct-ctcacgatcagcactattggaattggttcgtggacataaatagtgtgtggcctgataacagaaacctggtagcaggtgatct 230  Q
    ||||||||||||||||| || |||| || |||||||||  ||||||||||  ||||||| ||| ||||||||||| | |||||||| |||||||||| |     
T  13700696 ggactcttaacacaccttcttacgaccaacactattgggtttggttcgtgatcataaatggtgggtggcctgatagcggaaacctgatagcaggtgaccc 13700795  T
Q  231 aatggatctt 240  Q
    ||||||||||    
T  13700796 aatggatctt 13700805  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 134 - 300
Target Start/End: Original strand, 25258174 - 25258339
Alignment:
Q  134 actcttaacacacctc-tcacgatcagcactattggaattggttcgtggacataaatagtgtgtggcctgataacagaaacctggtagcaggtgatctaa 232  Q
    |||||||||||||| | ||| || ||||| |||| |  ||||||||||||||||||| ||| |||| | |||| | |||||||| |||||||||  | ||    
T  25258174 actcttaacacaccccctcatgaccagcattatttggcttggttcgtggacataaattgtgggtggtccgatagcggaaacctgatagcaggtggcccaa 25258273  T
Q  233 tggatcttaattatagactctgataccattttagaaatcgtggttgggcttaacacaaccccataaaa 300  Q
    ||||||||    | |  |||||||||||| |||||||||||||||| | |||||||||||||| ||||    
T  25258274 tggatcttgg--agaagctctgataccatcttagaaatcgtggttgagtttaacacaaccccacaaaa 25258339  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 134 - 300
Target Start/End: Original strand, 25321964 - 25322129
Alignment:
Q  134 actcttaacacacctc-tcacgatcagcactattggaattggttcgtggacataaatagtgtgtggcctgataacagaaacctggtagcaggtgatctaa 232  Q
    |||||||||||||| | ||| || ||||| |||| |  ||||||||||||||||||| ||| |||| | |||| | |||||||| |||||||||  | ||    
T  25321964 actcttaacacaccccctcatgaccagcattatttggcttggttcgtggacataaattgtgggtggtccgatagcggaaacctgatagcaggtggcccaa 25322063  T
Q  233 tggatcttaattatagactctgataccattttagaaatcgtggttgggcttaacacaaccccataaaa 300  Q
    ||||||||    | |  |||||||||||| |||||||||||||||| | |||||||||||||| ||||    
T  25322064 tggatcttgg--agaagctctgataccatcttagaaatcgtggttgagtttaacacaaccccacaaaa 25322129  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 132 - 295
Target Start/End: Complemental strand, 43117859 - 43117698
Alignment:
Q  132 ggactcttaacacacctctcacgatcagcactattggaattggttcgtggacataaatagtgtgtggcctgataacagaaacctggtagcaggtgatcta 231  Q
    ||||||||||||| || ||||||| || ||||||||   |||||||||||||||||||  || |||| | |||| | |||||||| |||||||||  | |    
T  43117859 ggactcttaacacccccctcacgaccaacactattgagcttggttcgtggacataaatgatgggtggtccgatagcggaaacctgatagcaggtggccca 43117760  T
Q  232 atggatcttaattatagactctgataccattttagaaatcgtggttgggcttaacacaacccca 295  Q
    || ||||||    | || ||||||||| || ||||||||||| ||||||| |||||||||||||    
T  43117759 atagatctt--ggaaaggctctgatactatcttagaaatcgttgttgggcctaacacaacccca 43117698  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 134 - 295
Target Start/End: Original strand, 17150341 - 17150501
Alignment:
Q  134 actcttaacacacctc-tcacgatcagcactattggaattggttcgtggacataaatagtgtgtggcctgataacagaaacctggtagcaggtgatctaa 232  Q
    |||||||||||||| | |||| | || ||||||||| |||||||  ||||||||||| ||| |||||| |||| | |||||||| ||| |||||  | ||    
T  17150341 actcttaacacaccccctcacaaacaacactattggtattggtttctggacataaatggtgggtggcccgatagcggaaacctgatagtaggtggcccaa 17150440  T
Q  233 tggatcttaattatagactctgataccattttagaaatcgtggttgggcttaacacaacccca 295  Q
    |||||||| |  | || |||||||||||| ||| ||||||| |||| || |||||||||||||    
T  17150441 tggatcttga--agaggctctgataccatcttaaaaatcgtagttgagcctaacacaacccca 17150501  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 132 - 292
Target Start/End: Original strand, 6919300 - 6919459
Alignment:
Q  132 ggactcttaacacacctc-tcacgatcagcactattggaattggttcgtggacataaatagtgtgtggcctgataacagaaacctggtagcaggtgatct 230  Q
    |||||||||||||||  | |||||| ||||||||||||  ||||||||||||||||||| ||| |||| | || | | |||||||| |||||| |||       
T  6919300 ggactcttaacacacaccatcacgaccagcactattgggcttggttcgtggacataaatggtgagtggtccgaaagcggaaacctgatagcagatgactc 6919399  T
Q  231 aatggatcttaattatagactctgataccattttagaaatcgtggttgggcttaacacaacc 292  Q
    |||||||||| |  | || || ||||||||| ||| |||||||||||| || ||||||||||    
T  6919400 aatggatcttga--agaggctttgataccatcttaaaaatcgtggttgagcctaacacaacc 6919459  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 250 - 300
Target Start/End: Complemental strand, 8098413 - 8098363
Alignment:
Q  250 ctctgataccattttagaaatcgtggttgggcttaacacaaccccataaaa 300  Q
    |||||||||||| ||||||||||||||||||||||||||||||||| ||||    
T  8098413 ctctgataccatattagaaatcgtggttgggcttaacacaaccccacaaaa 8098363  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 209 - 300
Target Start/End: Original strand, 2063683 - 2063772
Alignment:
Q  209 gaaacctggtagcaggtgatctaatggatcttaattatagactctgataccattttagaaatcgtggttgggcttaacacaaccccataaaa 300  Q
    |||||||| || || |||||| |||||||||| |  | || |||||||||||| ||||||||||||||||||| ||||||||||||| ||||    
T  2063683 gaaacctgataacatgtgatccaatggatcttga--agaggctctgataccatcttagaaatcgtggttgggcctaacacaaccccacaaaa 2063772  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 132 - 216
Target Start/End: Original strand, 17015982 - 17016066
Alignment:
Q  132 ggactcttaacacacctctcacgatcagcactattggaattggttcgtggacataaatagtgtgtggcctgataacagaaacctg 216  Q
    |||||||||||||| | ||||||| || |||||||||| ||||||||||||||||||| ||| |||| | |||| | ||||||||    
T  17015982 ggactcttaacacaaccctcacgaccaacactattggacttggttcgtggacataaatggtgggtggtccgatagcggaaacctg 17016066  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 171 - 300
Target Start/End: Original strand, 6413568 - 6413695
Alignment:
Q  171 ttggttcgtggacataaatagtgtgtggcctgataacagaaacctggtagcaggtgatctaatggatcttaattatagactctgataccattttagaaat 270  Q
    ||||||||||||||||||| ||| |||||  ||||   || ||||| |||||||||  | |||||||||| |  | || || ||||||||| ||||||||    
T  6413568 ttggttcgtggacataaatggtgggtggctcgatagtggatacctgatagcaggtggcccaatggatcttga--agaggctttgataccatattagaaat 6413665  T
Q  271 cgtggttgggcttaacacaaccccataaaa 300  Q
    ||| |||||| |||||||||||||| ||||    
T  6413666 cgttgttgggtttaacacaaccccaaaaaa 6413695  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 133 - 226
Target Start/End: Complemental strand, 15590150 - 15590056
Alignment:
Q  133 gactcttaacacacctc-tcacgatcagcactattggaattggttcgtggacataaatagtgtgtggcctgataacagaaacctggtagcaggtg 226  Q
    ||||||||||||||| | |||||| ||||||||||||  ||||||||||||||||||| ||| || ||| |||| | ||||| || |||||||||    
T  15590150 gactcttaacacaccccctcacgaccagcactattgggtttggttcgtggacataaatggtgagtagcccgatagcggaaacttgatagcaggtg 15590056  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 250 - 300
Target Start/End: Original strand, 21209909 - 21209959
Alignment:
Q  250 ctctgataccattttagaaatcgtggttgggcttaacacaaccccataaaa 300  Q
    |||| ||||||| ||||||||||||||||||||||||||||||||| ||||    
T  21209909 ctctaataccatattagaaatcgtggttgggcttaacacaaccccacaaaa 21209959  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 250 - 292
Target Start/End: Original strand, 24487633 - 24487675
Alignment:
Q  250 ctctgataccattttagaaatcgtggttgggcttaacacaacc 292  Q
    |||||||||||| ||||||||||||||||||||||||||||||    
T  24487633 ctctgataccatattagaaatcgtggttgggcttaacacaacc 24487675  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 132 - 300
Target Start/End: Complemental strand, 24528753 - 24528586
Alignment:
Q  132 ggactcttaacacacctc-tcacgatcagcactattggaattggttcgtggacataaatagtgtgtggcctgataacagaaacctggtagcaggtgatct 230  Q
    |||||||||||||||| | ||| ||  ||||||||| |  |||||||||||||||||||  || ||||   ||||| ||||| ||  ||||||||| ||     
T  24528753 ggactcttaacacaccccctcatgacaagcactattaggcttggttcgtggacataaatgttgggtggttcgataatagaaaactaatagcaggtggtcc 24528654  T
Q  231 aatggatcttaattatagactctgataccattttagaaatcgtggttgggcttaacacaaccccataaaa 300  Q
    |||||||| |    | || |||||||||||| ||||||||| ||||||||| ||||||||||||| ||||    
T  24528653 aatggatcatgg--agaggctctgataccatcttagaaatcatggttgggcctaacacaaccccacaaaa 24528586  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 137 - 225
Target Start/End: Original strand, 38731714 - 38731803
Alignment:
Q  137 cttaacacacctctcacgatcagcactattggaattggttcgtggacataaatagtgtgtggcc-tgataacagaaacctggtagcaggt 225  Q
    ||||||||||| ||||||| ||||||||||||  ||||||| |||||||||||  || ||| || ||||| |||||||||| ||||||||    
T  38731714 cttaacacacccctcacgaccagcactattgggcttggttcatggacataaatgatgggtgcccgtgatagcagaaacctgatagcaggt 38731803  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 132 - 198
Target Start/End: Original strand, 8081220 - 8081287
Alignment:
Q  132 ggactcttaacacacctc-tcacgatcagcactattggaattggttcgtggacataaatagtgtgtgg 198  Q
    |||||||||||||||| | |||||| ||||||||||||  ||||||||||||||||||| ||| ||||    
T  8081220 ggactcttaacacaccccctcacgaccagcactattgggcttggttcgtggacataaatggtgggtgg 8081287  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 135 - 225
Target Start/End: Original strand, 20510751 - 20510841
Alignment:
Q  135 ctcttaacacacctc-tcacgatcagcactattggaattggttcgtggacataaatagtgtgtggcctgataacagaaacctggtagcaggt 225  Q
    ||||||||||||| | ||||||||| |||||||||  ||||||||||||||||||| | | ||||||  ||| |||||||||| ||||||||    
T  20510751 ctcttaacacaccccctcacgatcatcactattgggcttggttcgtggacataaat-gggggtggcccaatagcagaaacctgatagcaggt 20510841  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 132 - 222
Target Start/End: Original strand, 33337344 - 33337435
Alignment:
Q  132 ggactcttaacacacctc-tcacgatcagcactattggaattggttcgtggacataaatagtgtgtggcctgataacagaaacctggtagca 222  Q
    |||||||||||||||| | ||| || ||||||||||||  ||||||||||||||||||| ||| |||||| |||  | |||||||| |||||    
T  33337344 ggactcttaacacaccccctcatgaccagcactattgggcttggttcgtggacataaatggtgggtggcccgatggcggaaacctgatagca 33337435  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 245 - 295
Target Start/End: Original strand, 1028381 - 1028431
Alignment:
Q  245 atagactctgataccattttagaaatcgtggttgggcttaacacaacccca 295  Q
    |||| |||||||||||| |||||||| |||||||||| |||||||||||||    
T  1028381 ataggctctgataccatgttagaaatggtggttgggcctaacacaacccca 1028431  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 250 - 300
Target Start/End: Original strand, 8081101 - 8081151
Alignment:
Q  250 ctctgataccattttagaaatcgtggttgggcttaacacaaccccataaaa 300  Q
    |||||||||||| ||||||||| ||||||||| ||||||||||||| ||||    
T  8081101 ctctgataccatcttagaaatcatggttgggcctaacacaaccccacaaaa 8081151  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 250 - 291
Target Start/End: Original strand, 17016385 - 17016426
Alignment:
Q  250 ctctgataccattttagaaatcgtggttgggcttaacacaac 291  Q
    |||||||||||| ||||||||||||||||||| |||||||||    
T  17016385 ctctgataccatgttagaaatcgtggttgggcctaacacaac 17016426  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 254 - 293
Target Start/End: Complemental strand, 13296764 - 13296725
Alignment:
Q  254 gataccattttagaaatcgtggttgggcttaacacaaccc 293  Q
    |||||||| ||||||||||||||||||| |||||||||||    
T  13296764 gataccatcttagaaatcgtggttgggcctaacacaaccc 13296725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 132 - 198
Target Start/End: Complemental strand, 18885440 - 18885373
Alignment:
Q  132 ggactcttaacacacc-tctcacgatcagcactattggaattggttcgtggacataaatagtgtgtgg 198  Q
    |||||||||||||||| |||||||| ||||||||||||  ||||||| | ||||||||| ||| ||||    
T  18885440 ggactcttaacacaccctctcacgaccagcactattgggcttggttcatagacataaatggtgggtgg 18885373  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 253 - 308
Target Start/End: Complemental strand, 20225134 - 20225079
Alignment:
Q  253 tgataccattttagaaatcgtggttgggcttaacacaaccccataaaatcaacttg 308  Q
    ||||| ||||||||||||||||||||  | ||||||||||||| |||||| |||||    
T  20225134 tgatatcattttagaaatcgtggttgaacctaacacaaccccacaaaatcgacttg 20225079  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 250 - 300
Target Start/End: Original strand, 1564555 - 1564605
Alignment:
Q  250 ctctgataccattttagaaatcgtggttgggcttaacacaaccccataaaa 300  Q
    |||||||| ||| |||||||||||||||| || ||||||||||||| ||||    
T  1564555 ctctgatatcatcttagaaatcgtggttgagcctaacacaaccccacaaaa 1564605  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 250 - 308
Target Start/End: Original strand, 26137333 - 26137391
Alignment:
Q  250 ctctgataccattttagaaatcgtggttgggcttaacacaaccccataaaatcaacttg 308  Q
    |||||||||||  ||||||||||||||||||| ||||| || |||| |||| |||||||    
T  26137333 ctctgataccaccttagaaatcgtggttgggcctaacataatcccacaaaaccaacttg 26137391  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 132 - 205
Target Start/End: Original strand, 30770155 - 30770229
Alignment:
Q  132 ggactcttaacacacctc-tcacgatcagcactattggaattggttcgtggacataaatagtgtgtggcctgata 205  Q
    |||||||||||||||| | |||| | |||| |||||||  ||||||||||||||||||| ||| |||||| ||||    
T  30770155 ggactcttaacacaccccctcacaaccagcgctattgggcttggttcgtggacataaatggtgggtggcccgata 30770229  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 132 - 188
Target Start/End: Original strand, 17352540 - 17352597
Alignment:
Q  132 ggactcttaacacacctc-tcacgatcagcactattggaattggttcgtggacataaa 188  Q
    |||||||||||||||||| | |||| ||||| ||||||  ||||||||||||||||||    
T  17352540 ggactcttaacacacctccttacgaccagcattattgggcttggttcgtggacataaa 17352597  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 263 - 300
Target Start/End: Original strand, 21209709 - 21209746
Alignment:
Q  263 ttagaaatcgtggttgggcttaacacaaccccataaaa 300  Q
    |||||||||||||||| |||||||||||||||| ||||    
T  21209709 ttagaaatcgtggttgtgcttaacacaaccccacaaaa 21209746  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 263 - 300
Target Start/End: Original strand, 25258095 - 25258132
Alignment:
Q  263 ttagaaatcgtggttgggcttaacacaaccccataaaa 300  Q
    ||||||||||||||||||| ||||||||||||| ||||    
T  25258095 ttagaaatcgtggttgggcctaacacaaccccacaaaa 25258132  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 263 - 300
Target Start/End: Original strand, 25321885 - 25321922
Alignment:
Q  263 ttagaaatcgtggttgggcttaacacaaccccataaaa 300  Q
    ||||||||||||||||||| ||||||||||||| ||||    
T  25321885 ttagaaatcgtggttgggcctaacacaaccccacaaaa 25321922  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #41
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 263 - 300
Target Start/End: Original strand, 27132994 - 27133031
Alignment:
Q  263 ttagaaatcgtggttgggcttaacacaaccccataaaa 300  Q
    ||||||||||||||||||| ||||||||||||| ||||    
T  27132994 ttagaaatcgtggttgggcctaacacaaccccacaaaa 27133031  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #42
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 263 - 300
Target Start/End: Complemental strand, 28510174 - 28510137
Alignment:
Q  263 ttagaaatcgtggttgggcttaacacaaccccataaaa 300  Q
    ||||||||||||||||||| ||||||||||||| ||||    
T  28510174 ttagaaatcgtggttgggcctaacacaaccccacaaaa 28510137  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #43
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 263 - 300
Target Start/End: Original strand, 41666758 - 41666795
Alignment:
Q  263 ttagaaatcgtggttgggcttaacacaaccccataaaa 300  Q
    ||||||||||||||||||| ||||||||||||| ||||    
T  41666758 ttagaaatcgtggttgggcctaacacaaccccacaaaa 41666795  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #44
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 247 - 295
Target Start/End: Complemental strand, 6415642 - 6415594
Alignment:
Q  247 agactctgataccattttagaaatcgtggttgggcttaacacaacccca 295  Q
    ||||||||||||||||||| ||||| |||||| |  |||||||||||||    
T  6415642 agactctgataccattttaaaaatcatggttgaggctaacacaacccca 6415594  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 63; Significance: 2e-27; HSPs: 31)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 132 - 300
Target Start/End: Complemental strand, 13353414 - 13353247
Alignment:
Q  132 ggactcttaacacacctc-tcacgatcagcactattggaattggttcgtggacataaatagtgtgtggcctgataacagaaacctggtagcaggtgatct 230  Q
    |||||||||||||||| | |||||| ||||||||||||  ||||||||||||||||||| ||| |||||| |||| | |||||||| || ||||||  |     
T  13353414 ggactcttaacacaccccctcacgaccagcactattgggcttggttcgtggacataaatggtgggtggcccgatagcggaaacctgataacaggtggccc 13353315  T
Q  231 aatggatcttaattatagactctgataccattttagaaatcgtggttgggcttaacacaaccccataaaa 300  Q
    ||||||||||    | || |||||||||||| |||||||| |||||||||| ||||||||||||| ||||    
T  13353314 aatggatctt--ggagaggctctgataccatcttagaaatggtggttgggcctaacacaaccccacaaaa 13353247  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 132 - 300
Target Start/End: Complemental strand, 33796539 - 33796372
Alignment:
Q  132 ggactcttaacacacctc-tcacgatcagcactattggaattggttcgtggacataaatagtgtgtggcctgataacagaaacctggtagcaggtgatct 230  Q
    |||||||||||||||| | |||||| ||||||||||||  ||||||||||||||||||| ||| |||||| |||| | |||||||| || ||||||  |     
T  33796539 ggactcttaacacaccccctcacgaccagcactattgggcttggttcgtggacataaatggtgggtggcccgatagcggaaacctgataacaggtggccc 33796440  T
Q  231 aatggatcttaattatagactctgataccattttagaaatcgtggttgggcttaacacaaccccataaaa 300  Q
    ||||||||||    | || |||||||||||| |||||||| |||||||||| ||||||||||||| ||||    
T  33796439 aatggatctt--ggagaggctctgataccatcttagaaatggtggttgggcctaacacaaccccacaaaa 33796372  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 62; E-Value: 9e-27
Query Start/End: Original strand, 132 - 300
Target Start/End: Original strand, 4868683 - 4868851
Alignment:
Q  132 ggactcttaacacacctc-tcacgatcagcactattggaattggttcgtggacataaatagtgtgtggcctgataacagaaacctggtagcaggtgatct 230  Q
    |||||||||||||||| | |||||| ||||||||||||  ||||||||||||||||||| ||| |||||| |||||| |||||||| |||||||||  |     
T  4868683 ggactcttaacacaccccctcacgaccagcactattgggcttggttcgtggacataaatggtgggtggcccgataacggaaacctgatagcaggtggccc 4868782  T
Q  231 aatggatcttaattatagactctgataccattttagaaatcgtggttgggcttaacacaaccccataaaa 300  Q
    |  |||||||      || |||||||||||| ||||||||||||||||||| ||||||||||||| ||||    
T  4868783 agcggatctt-ggaggaggctctgataccatcttagaaatcgtggttgggcctaacacaaccccacaaaa 4868851  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 133 - 300
Target Start/End: Original strand, 6542815 - 6542981
Alignment:
Q  133 gactcttaacacac-ctctcacgatcagcactattggaattggttcgtggacataaatagtgtgtggcctgataacagaaacctggtagcaggtgatcta 231  Q
    |||||||||||||| | ||||||| || |  ||||||| ||||||||||||||||||| ||| ||| || |||||| |||||||| ||||| |||| | |    
T  6542815 gactcttaacacacaccctcacgaccaacgatattggacttggttcgtggacataaatggtgggtgacccgataacggaaacctgatagcaagtgaccca 6542914  T
Q  232 atggatcttaattatagactctgataccattttagaaatcgtggttgggcttaacacaaccccataaaa 300  Q
    ||||||||| |  | || |||||||||||| || |||||||||||||||  ||||||||||||| ||||    
T  6542915 atggatcttga--agaggctctgataccatctttgaaatcgtggttgggtctaacacaaccccacaaaa 6542981  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 132 - 292
Target Start/End: Original strand, 12330050 - 12330209
Alignment:
Q  132 ggactcttaacacacctc-tcacgatcagcactattggaattggttcgtggacataaatagtgtgtggcctgataacagaaacctggtagcaggtgatct 230  Q
    |||||||||||||||| | |||||| |||||  |||||  ||||||||||||||||||| ||| |||||| |||  | |||||||| |||||||||  |     
T  12330050 ggactcttaacacaccccctcacgaccagcataattgggcttggttcgtggacataaatggtgggtggcccgatggcggaaacctgatagcaggtggccc 12330149  T
Q  231 aatggatcttaattatagactctgataccattttagaaatcgtggttgggcttaacacaacc 292  Q
    ||||||||||    | || |||||||||||| ||||||||||||||||||| ||||||||||    
T  12330150 aatggatctt--ggagaggctctgataccatattagaaatcgtggttgggcctaacacaacc 12330209  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 132 - 300
Target Start/End: Complemental strand, 33494752 - 33494585
Alignment:
Q  132 ggactcttaacacacct-ctcacgatcagcactattggaattggttcgtggacataaatagtgtgtggcctgataacagaaacctggtagcaggtgatct 230  Q
    ||||||||||||||||  ||||||| ||||||||||||  |||||||||| |||||||  ||| |||||| ||||   |||||||| |||||||||| |     
T  33494752 ggactcttaacacaccaactcacgaccagcactattgggcttggttcgtgaacataaacggtgggtggcccgatagtggaaacctgatagcaggtgaccc 33494653  T
Q  231 aatggatcttaattatagactctgataccattttagaaatcgtggttgggcttaacacaaccccataaaa 300  Q
    |||||||||  |  | ||  ||||||||||| |||||||| |||||||||| ||||||||||||| ||||    
T  33494652 aatggatctcga--agaggttctgataccatcttagaaatggtggttgggcctaacacaaccccacaaaa 33494585  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 132 - 237
Target Start/End: Original strand, 17147766 - 17147872
Alignment:
Q  132 ggactcttaacacacctc-tcacgatcagcactattggaattggttcgtggacataaatagtgtgtggcctgataacagaaacctggtagcaggtgatct 230  Q
    |||||||||||||||| | |||| | ||||||||||||  ||||||||||||||||||| ||| ||| ||||||| | |||||||| |||||||||| |     
T  17147766 ggactcttaacacaccccctcacaaccagcactattgggcttggttcgtggacataaatggtgggtgacctgatagcggaaacctgatagcaggtgaccc 17147865  T
Q  231 aatggat 237  Q
    |||||||    
T  17147866 aatggat 17147872  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 132 - 308
Target Start/End: Complemental strand, 3680224 - 3680050
Alignment:
Q  132 ggactcttaacacacctctcacgatcagcactattggaattggttcgtggacataaatagtgtgtggcctgataacagaaacctggtagcaggtgatcta 231  Q
    ||||||||||||| || ||||||| || |||||||||  |||||| |||||||||||| |||  || || |||| | |||||||  |||||||||| |      
T  3680224 ggactcttaacacccccctcacgaccaacactattgggcttggtttgtggacataaatggtggatgacccgatagcggaaacctaatagcaggtgacccg 3680125  T
Q  232 atggatcttaattatagactctgataccattttagaaatcgtggttgggcttaacacaaccccataaaatcaacttg 308  Q
    |||||| ||    | ||  ||||||||||| |||||||| |||||||||| ||||||||||||| |||||| |||||    
T  3680124 atggattttgg--agagggtctgataccatcttagaaattgtggttgggcctaacacaaccccacaaaatcgacttg 3680050  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 133 - 227
Target Start/End: Original strand, 6400727 - 6400822
Alignment:
Q  133 gactcttaacacacctc-tcacgatcagcactattggaattggttcgtggacataaatagtgtgtggcctgataacagaaacctggtagcaggtga 227  Q
    |||||||||||| || | |||||| ||||||||||||  ||||||||||||||||||| ||| |||| | |||| |||||||||| ||||||||||    
T  6400727 gactcttaacaccccccctcacgaccagcactattgggcttggttcgtggacataaatggtgggtggtccgatagcagaaacctgatagcaggtga 6400822  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 132 - 300
Target Start/End: Complemental strand, 9705232 - 9705066
Alignment:
Q  132 ggactcttaacacacctc-tcacgatcagcactattggaattggttcgtggacataaatagtgtgtggcctgataacagaaacctggtagcaggtgatct 230  Q
    |||||||||||||||| | |||||| ||||||||||||| ||||||  ||||||||||| ||| |||||| |||||  |||||||| |||||||||  |     
T  9705232 ggactcttaacacaccccctcacgaccagcactattggacttggtt--tggacataaatggtgggtggcccgataatggaaacctgatagcaggtggccc 9705135  T
Q  231 aatggatcttaattatagactctgataccattttagaaatcgtggttgggcttaacacaaccccataaaa 300  Q
    ||   |||||      || |||||||||||| |||||||| |||||||||| ||||||||||||| ||||    
T  9705134 aacaaatctt-ggaggaggctctgataccatcttagaaatggtggttgggcctaacacaaccccacaaaa 9705066  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 171 - 292
Target Start/End: Original strand, 6237618 - 6237737
Alignment:
Q  171 ttggttcgtggacataaatagtgtgtggcctgataacagaaacctggtagcaggtgatctaatggatcttaattatagactctgataccattttagaaat 270  Q
    ||||||||||||||||||| ||| |||| | |||| | |||||||||||||| ||| || |||||||||| |  | ||||||| ||||||| |||||| |    
T  6237618 ttggttcgtggacataaatggtgggtggtccgatagcggaaacctggtagcaagtggtccaatggatcttga--agagactctaataccatcttagaagt 6237715  T
Q  271 cgtggttgggcttaacacaacc 292  Q
    |||| ||| |  ||||||||||    
T  6237716 cgtgattgagtctaacacaacc 6237737  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 250 - 300
Target Start/End: Complemental strand, 8026485 - 8026435
Alignment:
Q  250 ctctgataccattttagaaatcgtggttgggcttaacacaaccccataaaa 300  Q
    |||||||||||| ||||||||||||||||||| ||||||||||||| ||||    
T  8026485 ctctgataccatattagaaatcgtggttgggcctaacacaaccccacaaaa 8026435  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 250 - 300
Target Start/End: Complemental strand, 30256908 - 30256858
Alignment:
Q  250 ctctgataccattttagaaatcgtggttgggcttaacacaaccccataaaa 300  Q
    |||||||||||| ||||||||||||||||||| ||||||||||||| ||||    
T  30256908 ctctgataccatattagaaatcgtggttgggcctaacacaaccccacaaaa 30256858  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 247 - 307
Target Start/End: Original strand, 8001535 - 8001595
Alignment:
Q  247 agactctgataccattttagaaatcgtggttgggcttaacacaaccccataaaatcaactt 307  Q
    ||||||||||||||| |||||||| |||||||||| ||||||||||| | |||||| ||||    
T  8001535 agactctgataccatcttagaaattgtggttgggcctaacacaacccaacaaaatcgactt 8001595  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 249 - 301
Target Start/End: Complemental strand, 20373667 - 20373615
Alignment:
Q  249 actctgataccattttagaaatcgtggttgggcttaacacaaccccataaaat 301  Q
    ||||||||||||| ||| ||||||||||||||| ||||||||||||| |||||    
T  20373667 actctgataccatcttataaatcgtggttgggcctaacacaaccccacaaaat 20373615  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 250 - 300
Target Start/End: Complemental strand, 27653313 - 27653263
Alignment:
Q  250 ctctgataccattttagaaatcgtggttgggcttaacacaaccccataaaa 300  Q
    |||||||||||| ||||||||||||||||||| |||||||| |||| ||||    
T  27653313 ctctgataccatattagaaatcgtggttgggcctaacacaatcccacaaaa 27653263  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 250 - 300
Target Start/End: Complemental strand, 30256674 - 30256624
Alignment:
Q  250 ctctgataccattttagaaatcgtggttgggcttaacacaaccccataaaa 300  Q
    |||||||||||  ||||||||||||||||||| ||||||||||||| ||||    
T  30256674 ctctgataccaccttagaaatcgtggttgggcctaacacaaccccacaaaa 30256624  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 177 - 290
Target Start/End: Original strand, 2736318 - 2736430
Alignment:
Q  177 cgtggacataaatagtgtgtggcctgataacagaaacctggtagcaggtgatctaatggatcttaattatagactctgataccattttagaaatcgtggt 276  Q
    |||||||||||||  || |||| | |||||| |||||||  |||||||||  | ||| |||||| | |  || |||||||| ||||||||||||||||||    
T  2736318 cgtggacataaatgatgggtggtccgataacggaaacctaatagcaggtggcccaatagatcttgaatc-aggctctgatatcattttagaaatcgtggt 2736416  T
Q  277 tgggcttaacacaa 290  Q
    | ||||||||||||    
T  2736417 taggcttaacacaa 2736430  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 253 - 302
Target Start/End: Complemental strand, 21690815 - 21690766
Alignment:
Q  253 tgataccattttagaaatcgtggttgggcttaacacaaccccataaaatc 302  Q
    ||||||||| |||||||||||||||| || ||||||||||||| ||||||    
T  21690815 tgataccatattagaaatcgtggttgagcctaacacaaccccacaaaatc 21690766  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 132 - 240
Target Start/End: Complemental strand, 31961156 - 31961047
Alignment:
Q  132 ggactcttaacaca-cctctcacgatcagcactattggaattggttcgtggacataaatagtgtgtggcctgataacagaaacctggtagcaggtgatct 230  Q
    |||||||||||||| || |||||||  || ||||||||  ||||| ||||||||||||| ||| | |||  |||| |||||||||| |||||||||  |     
T  31961156 ggactcttaacacatcccctcacgactagtactattgggcttggtccgtggacataaatggtggggggcacgatagcagaaacctgatagcaggtggccc 31961057  T
Q  231 aatggatctt 240  Q
    ||||||||||    
T  31961056 aatggatctt 31961047  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 133 - 300
Target Start/End: Complemental strand, 24554327 - 24554163
Alignment:
Q  133 gactcttaacacacctctcacgatcagcactattggaattggttcgtggacataaatagtgtgtggcctgataacagaaacctggtagcaggtgatctaa 232  Q
    ||||||||||||||  | ||| ||||||| |||||   ||||||||| ||||||||| ||| |||| |||||| | | |||||| |||||||||  | ||    
T  24554327 gactcttaacacactccccacaatcagcattattgagcttggttcgttgacataaatggtgggtggtctgatagcggtaacctgatagcaggtg-gccaa 24554229  T
Q  233 tggatcttaattatagactctgataccattttagaaatcgtggttgggcttaacacaaccccataaaa 300  Q
    |||||||| |  | | ||||||||||||| ||||||||  |||||| |  ||||||||| ||| ||||    
T  24554228 tggatcttga--agacactctgataccatgttagaaattatggttgagactaacacaactccacaaaa 24554163  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 261 - 300
Target Start/End: Original strand, 8566958 - 8566997
Alignment:
Q  261 ttttagaaatcgtggttgggcttaacacaaccccataaaa 300  Q
    ||||||||||||||||||||| ||||||||||||| ||||    
T  8566958 ttttagaaatcgtggttgggcctaacacaaccccacaaaa 8566997  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 149 - 240
Target Start/End: Original strand, 33631694 - 33631785
Alignment:
Q  149 ctcacgatcagcactattggaattggttcgtggacataaatagtgtgtggcctgataacagaaacctggtagcaggtgatctaatggatctt 240  Q
    ||||||| |||||||||||   |||||| |||||||||||| ||| ||| || |||| |||||||||| || ||||||| | ||| ||||||    
T  33631694 ctcacgaccagcactattgagcttggttagtggacataaatggtgggtgtcccgatagcagaaacctgatatcaggtgacccaatagatctt 33631785  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 263 - 300
Target Start/End: Original strand, 4161847 - 4161884
Alignment:
Q  263 ttagaaatcgtggttgggcttaacacaaccccataaaa 300  Q
    ||||||||||||||||||| ||||||||||||| ||||    
T  4161847 ttagaaatcgtggttgggcctaacacaaccccacaaaa 4161884  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 263 - 300
Target Start/End: Original strand, 4223467 - 4223504
Alignment:
Q  263 ttagaaatcgtggttgggcttaacacaaccccataaaa 300  Q
    ||||||||||||||||||| ||||||||||||| ||||    
T  4223467 ttagaaatcgtggttgggcctaacacaaccccacaaaa 4223504  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 263 - 300
Target Start/End: Original strand, 4868578 - 4868615
Alignment:
Q  263 ttagaaatcgtggttgggcttaacacaaccccataaaa 300  Q
    ||||||||||||||||||| ||||||||||||| ||||    
T  4868578 ttagaaatcgtggttgggcctaacacaaccccacaaaa 4868615  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 250 - 295
Target Start/End: Original strand, 5572604 - 5572649
Alignment:
Q  250 ctctgataccattttagaaatcgtggttgggcttaacacaacccca 295  Q
    |||||||||||| |||||||||||||||||||  |||| |||||||    
T  5572604 ctctgataccatattagaaatcgtggttgggccgaacaaaacccca 5572649  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 263 - 300
Target Start/End: Complemental strand, 8026687 - 8026650
Alignment:
Q  263 ttagaaatcgtggttgggcttaacacaaccccataaaa 300  Q
    ||||||||||||||||||| ||||||||||||| ||||    
T  8026687 ttagaaatcgtggttgggcctaacacaaccccacaaaa 8026650  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 263 - 300
Target Start/End: Complemental strand, 11721988 - 11721951
Alignment:
Q  263 ttagaaatcgtggttgggcttaacacaaccccataaaa 300  Q
    ||||||||||||||||||| ||||||||||||| ||||    
T  11721988 ttagaaatcgtggttgggcctaacacaaccccacaaaa 11721951  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 251 - 300
Target Start/End: Original strand, 15082133 - 15082182
Alignment:
Q  251 tctgataccattttagaaatcgtggttgggcttaacacaaccccataaaa 300  Q
    ||||||||||| |||||||||||| |||||| |||||||| |||| ||||    
T  15082133 tctgataccatattagaaatcgtgtttgggcctaacacaatcccacaaaa 15082182  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 264 - 300
Target Start/End: Original strand, 5572386 - 5572422
Alignment:
Q  264 tagaaatcgtggttgggcttaacacaaccccataaaa 300  Q
    |||||||||||||||||| ||||||||||||| ||||    
T  5572386 tagaaatcgtggttgggcctaacacaaccccacaaaa 5572422  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 61; Significance: 4e-26; HSPs: 51)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 134 - 292
Target Start/End: Complemental strand, 20301472 - 20301315
Alignment:
Q  134 actcttaacacacctc-tcacgatcagcactattggaattggttcgtggacataaatagtgtgtggcctgataacagaaacctggtagcaggtgatctaa 232  Q
    |||||||||||||| | |||||| ||||||||||||  ||||||||| ||||||||| ||| |||| | |||| | |||||||| |||||||||  | ||    
T  20301472 actcttaacacaccccctcacgaccagcactattgggcttggttcgtagacataaatggtgggtggtccgatagcggaaacctgatagcaggtggcccaa 20301373  T
Q  233 tggatcttaattatagactctgataccattttagaaatcgtggttgggcttaacacaacc 292  Q
    |||||||| |  | || |||||||||||| ||||||||||||||||||| ||||||||||    
T  20301372 tggatcttga--agaggctctgataccatcttagaaatcgtggttgggcctaacacaacc 20301315  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 134 - 292
Target Start/End: Complemental strand, 21088104 - 21087947
Alignment:
Q  134 actcttaacacacctc-tcacgatcagcactattggaattggttcgtggacataaatagtgtgtggcctgataacagaaacctggtagcaggtgatctaa 232  Q
    |||||||||||||| | |||||| ||||||||||||  ||||||||| ||||||||| ||| |||| | |||| | |||||||| |||||||||  | ||    
T  21088104 actcttaacacaccccctcacgaccagcactattgggcttggttcgtagacataaatggtgggtggtccgatagcggaaacctgatagcaggtggcccaa 21088005  T
Q  233 tggatcttaattatagactctgataccattttagaaatcgtggttgggcttaacacaacc 292  Q
    |||||||| |  | || |||||||||||| ||||||||||||||||||| ||||||||||    
T  21088004 tggatcttga--agaggctctgataccatcttagaaatcgtggttgggcctaacacaacc 21087947  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 132 - 293
Target Start/End: Complemental strand, 41790871 - 41790711
Alignment:
Q  132 ggactcttaacacacctc-tcacgatcagcactattggaattggttcgtggacataaatagtgtgtggcctgataacagaaacctggtagcaggtgatct 230  Q
    |||||||||||||||| | |||||| ||||||| ||||  ||||||| ||||||||||| ||| |||||  |||| | |||||||| |||||||||  |     
T  41790871 ggactcttaacacaccccctcacgaccagcactcttgggcttggttcatggacataaatggtgggtggctcgatagcggaaacctgatagcaggtggccc 41790772  T
Q  231 aatggatcttaattatagactctgataccattttagaaatcgtggttgggcttaacacaaccc 293  Q
    |||||||||| |  | || |||||||||||| ||||||||||||||||||| |||||||||||    
T  41790771 aatggatcttga--agaggctctgataccatcttagaaatcgtggttgggcctaacacaaccc 41790711  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 132 - 300
Target Start/End: Original strand, 11232300 - 11232467
Alignment:
Q  132 ggactcttaacacacctc-tcacgatcagcactattggaattggttcgtggacataaatagtgtgtggcctgataacagaaacctggtagcaggtgatct 230  Q
    |||||||||||||||| | |||||| ||||||||||||  ||||||||||||||||||| ||| ||| |  |||| | |||||||| || ||||||  |     
T  11232300 ggactcttaacacaccccctcacgaccagcactattgggcttggttcgtggacataaatggtgggtgactcgatagcggaaacctgataacaggtggccc 11232399  T
Q  231 aatggatcttaattatagactctgataccattttagaaatcgtggttgggcttaacacaaccccataaaa 300  Q
    ||||||||||    | || |||||||||||| |||||||| |||||||||| ||||||||||||| ||||    
T  11232400 aatggatctt--ggagaggctctgataccatcttagaaatggtggttgggcctaacacaaccccacaaaa 11232467  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 132 - 300
Target Start/End: Original strand, 39052800 - 39052967
Alignment:
Q  132 ggactcttaacacacctc-tcacgatcagcactattggaattggttcgtggacataaatagtgtgtggcctgataacagaaacctggtagcaggtgatct 230  Q
    |||||||||||||||| | |||||| || |||||||||  ||||||||||||||||||| ||| |||||| |||| | |||||||| ||||||| |  |     
T  39052800 ggactcttaacacaccccctcacgaccaacactattgggcttggttcgtggacataaatggtgggtggccggatagcggaaacctgatagcagggggcca 39052899  T
Q  231 aatggatcttaattatagactctgataccattttagaaatcgtggttgggcttaacacaaccccataaaa 300  Q
    ||||||||||    | || |||| ||||||| ||||||||||| ||||||| ||||||||||||| ||||    
T  39052900 aatggatctt--ggagaggctctaataccatcttagaaatcgttgttgggcctaacacaaccccacaaaa 39052967  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 132 - 300
Target Start/End: Original strand, 5932055 - 5932222
Alignment:
Q  132 ggactcttaacacacc-tctcacgatcagcactattggaattggttcgtggacataaatagtgtgtggcctgataacagaaacctggtagcaggtgatct 230  Q
    |||||||||||||||| | |||||| |||||||||||   |||||| || ||||||||| ||| |||||| |||||| ||||| || ||| ||||| ||     
T  5932055 ggactcttaacacaccctttcacgaccagcactattgcgcttggtttgtcgacataaatggtgggtggcccgataacggaaacgtgatagtaggtggtcc 5932154  T
Q  231 aatggatcttaattatagactctgataccattttagaaatcgtggttgggcttaacacaaccccataaaa 300  Q
    ||||||||||    | || |||||||||||| ||| |||| |||||||||| ||||||||||||| ||||    
T  5932155 aatggatctt--ggagaggctctgataccatcttaaaaatggtggttgggcctaacacaaccccacaaaa 5932222  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 132 - 300
Target Start/End: Original strand, 20094666 - 20094832
Alignment:
Q  132 ggactcttaacacacctc-tcacgatcagcactattggaattggttcgtggacataaatagtgtgtggcctgataacagaaacctggtagcaggtgatct 230  Q
    ||||||||||||| || | |||||| ||||||||||||  ||||||||||||||||||| ||| ||||||||||| |  ||||||| ||| |||||  |     
T  20094666 ggactcttaacacgccccctcacgaccagcactattgggcttggttcgtggacataaatggtgggtggcctgatagcgaaaacctgataggaggtggccc 20094765  T
Q  231 aatggatcttaattatagactctgataccattttagaaatcgtggttgggcttaacacaaccccataaaa 300  Q
    |||||||||| |  | | ||||||||||||  ||| ||||||||||||||| ||| ||||||||| ||||    
T  20094766 aatggatcttga--agaaactctgataccaacttataaatcgtggttgggcctaa-acaaccccacaaaa 20094832  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 132 - 293
Target Start/End: Complemental strand, 31197825 - 31197668
Alignment:
Q  132 ggactcttaacacacctctcacgatcagcactattggaattggttcgtggacataaatagtgtgtggcctgataacagaaacctggtagcaggtgatcta 231  Q
    ||||||||||||| || ||||| |||||||||||||   ||||||||||||||||||| ||| |||| | |||| | |||||||| |||||||||  | |    
T  31197825 ggactcttaacacccc-ctcacaatcagcactattgagcttggttcgtggacataaatggtgggtggtccgatagcggaaacctgatagcaggtggccca 31197727  T
Q  232 atggatcttaattatagactctgataccattttagaaatcgtggttgggcttaacacaaccc 293  Q
    ||||||||     | || |||||||||||| ||||||||| ||||||||| |||||||||||    
T  31197726 atggatct--cggagaggctctgataccatcttagaaatc-tggttgggcctaacacaaccc 31197668  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 133 - 300
Target Start/End: Original strand, 3157431 - 3157597
Alignment:
Q  133 gactcttaacacacct-ctcacgatcagcactattggaattggttcgtggacataaatagtgtgtggcctgataacagaaacctggtagcaggtgatcta 231  Q
    |||||||||||||||  ||||||| ||||||||||||  ||||||||||||||||||| ||| ||| || |||| |  ||||||| ||||||||| || |    
T  3157431 gactcttaacacacccactcacgaccagcactattgggcttggttcgtggacataaatggtgggtgtcccgatagcgaaaacctgatagcaggtggtcca 3157530  T
Q  232 atggatcttaattatagactctgataccattttagaaatcgtggttgggcttaacacaaccccataaaa 300  Q
    |||||| ||    | || |||||||| ||| ||| |||| ||||||| || ||||||||||||| ||||    
T  3157531 atggatttt--ggagaggctctgatatcatcttataaatggtggttgagcctaacacaaccccacaaaa 3157597  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 132 - 240
Target Start/End: Original strand, 18004202 - 18004309
Alignment:
Q  132 ggactcttaacacacctctcacgatcagcactattggaattggttcgtggacataaatagtgtgtggcctgataacagaaacctggtagcaggtgatcta 231  Q
    ||||||||||||| || ||||||| |||||||||| |  ||||||||||||||||||| ||| |||||| |||| | |||||||| |||||||||  | |    
T  18004202 ggactcttaacacccc-ctcacgaccagcactattaggcttggttcgtggacataaatggtgggtggcccgatagcggaaacctgatagcaggtggccca 18004300  T
Q  232 atggatctt 240  Q
    |||||||||    
T  18004301 atggatctt 18004309  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 132 - 226
Target Start/End: Original strand, 39052643 - 39052738
Alignment:
Q  132 ggactcttaacacacctc-tcacgatcagcactattggaattggttcgtggacataaatagtgtgtggcctgataacagaaacctggtagcaggtg 226  Q
    |||||||||||||||| | |||||| || |||||||||  ||||||||||||||||||| ||| |||||| |||| | |||||||| |||||||||    
T  39052643 ggactcttaacacaccccctcacgaccaacactattgggcttggttcgtggacataaatggtgggtggccggatagcggaaacctgatagcaggtg 39052738  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 133 - 226
Target Start/End: Original strand, 3157116 - 3157210
Alignment:
Q  133 gactcttaacacacctc-tcacgatcagcactattggaattggttcgtggacataaatagtgtgtggcctgataacagaaacctggtagcaggtg 226  Q
    ||||||||||||||| | |||||| ||||||||||||  ||||||||||||||||||| ||| ||| || |||| | |||||||| |||||||||    
T  3157116 gactcttaacacaccccctcacgaccagcactattgggcttggttcgtggacataaatggtgggtgtcccgatagcggaaacctgatagcaggtg 3157210  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 132 - 226
Target Start/End: Complemental strand, 39960169 - 39960075
Alignment:
Q  132 ggactcttaacacacctctcacgatcagcactattggaattggttcgtggacataaatagtgtgtggcctgataacagaaacctggtagcaggtg 226  Q
    ||||||||||||| || ||||||| ||||||||||||  ||||||||||||||||||| ||| || ||  |||| | |||||||| |||||||||    
T  39960169 ggactcttaacacccccctcacgaccagcactattgggcttggttcgtggacataaatggtgggtagctcgatagcggaaacctgatagcaggtg 39960075  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 132 - 291
Target Start/End: Complemental strand, 8084340 - 8084182
Alignment:
Q  132 ggactcttaacacacctc-tcacgatcagcactattggaattggttcgtggacataaatagtgtgtggcctgataacagaaacctggtagcaggtgatct 230  Q
    |||||||||||||||| | |||||| ||||||||||||  ||||||||||||||||||| ||| |||  |  ||| |  ||||||| ||||| |||  |     
T  8084340 ggactcttaacacaccccctcacgaccagcactattgggcttggttcgtggacataaatggtgggtgatccaatagcgaaaacctgatagcatgtggccc 8084241  T
Q  231 aatggatcttaattatagactctgataccattttagaaatcgtggttgggcttaacacaac 291  Q
    ||||||||||    | || |||||||||||| ||||||||||||||||||  |||||||||    
T  8084240 aatggatctt--ggagaggctctgataccatcttagaaatcgtggttgggtctaacacaac 8084182  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 171 - 300
Target Start/End: Original strand, 15042795 - 15042924
Alignment:
Q  171 ttggttcgtggacataaatagtgtgtggcctgataacagaaacctggtagcaggtgatctaatggatcttaattatagactctgataccattttagaaat 270  Q
    ||||||||||||||||||  ||| ||||||||||| | |||||||| |||||||||  | |||| |||||    | || || ||||| ||| ||||||||    
T  15042795 ttggttcgtggacataaacggtgggtggcctgatagcggaaacctgatagcaggtggcccaatgaatcttggagagaggctatgataacatcttagaaat 15042894  T
Q  271 cgtggttgggcttaacacaaccccataaaa 300  Q
    ||||||| ||| ||||||||||||| ||||    
T  15042895 cgtggttaggcctaacacaaccccacaaaa 15042924  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 149 - 303
Target Start/End: Complemental strand, 10615589 - 10615437
Alignment:
Q  149 ctcacgatcagcactattggaattggttcgtggacataaatagtgtgtggcctgataacagaaacctggtagcaggtgatctaatggatcttaattatag 248  Q
    |||||||  |||||||||||| |||||||||||| |||||||||  ||| || |||| | |||||||| || |||||| |  ||||||||||    | ||    
T  10615589 ctcacgactagcactattggacttggttcgtggagataaatagttggtgacccgatagcggaaacctgatatcaggtggtacaatggatctt--ggagag 10615492  T
Q  249 actctgataccattttagaaatcgtggttgggcttaacacaaccccataaaatca 303  Q
     |||||||||||| ||||||||  ||||| | | ||||||||||||| |||||||    
T  10615491 gctctgataccatcttagaaattatggtttgacctaacacaaccccacaaaatca 10615437  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 134 - 240
Target Start/End: Original strand, 35682889 - 35682996
Alignment:
Q  134 actcttaacac-acctctcacgatcagcactattggaattggttcgtggacataaatagtgtgtggcctgataacagaaacctggtagcaggtgatctaa 232  Q
    ||||||||||| ||| ||||||| |||||||||||   ||||||||||||||||||| ||| |||||| |||| | |||||||  |||||||||  | ||    
T  35682889 actcttaacaccacccctcacgaccagcactattgagcttggttcgtggacataaatggtgggtggcccgatagcggaaacctaatagcaggtggcccaa 35682988  T
Q  233 tggatctt 240  Q
    ||||||||    
T  35682989 tggatctt 35682996  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 250 - 300
Target Start/End: Original strand, 19256808 - 19256858
Alignment:
Q  250 ctctgataccattttagaaatcgtggttgggcttaacacaaccccataaaa 300  Q
    |||||||||||| ||||||||||||||||||| ||||||||||||| ||||    
T  19256808 ctctgataccatattagaaatcgtggttgggcctaacacaaccccacaaaa 19256858  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 141 - 302
Target Start/End: Original strand, 422334 - 422493
Alignment:
Q  141 acacacctctcacgatcagcactattggaattggttcgtggacataaatagtgtgtggcctgataacagaaacctggtagcaggtgatctaatggatctt 240  Q
    |||| ||||||| || || || ||||| | |||||||||||||| |||| ||| |||||| || | | |||||||| |||||||||  | || | |||||    
T  422334 acacccctctcatgaccaacattattgaacttggttcgtggacaaaaatggtgggtggcccgagagcggaaacctgatagcaggtggcccaacg-atctt 422432  T
Q  241 aattatagactctgataccattttagaaatcgtggttgggcttaacacaaccccataaaatc 302  Q
      || ||| |||||||||||| |||||||| ||||||||||  |||||||||||| ||||||    
T  422433 gttt-taggctctgataccatcttagaaattgtggttgggccaaacacaaccccacaaaatc 422493  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 250 - 303
Target Start/End: Complemental strand, 12317142 - 12317089
Alignment:
Q  250 ctctgataccattttagaaatcgtggttgggcttaacacaaccccataaaatca 303  Q
    |||||||||||| ||||||||||||||||||| |||||||| |||| |||||||    
T  12317142 ctctgataccatcttagaaatcgtggttgggcctaacacaatcccacaaaatca 12317089  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 174 - 302
Target Start/End: Complemental strand, 8716285 - 8716158
Alignment:
Q  174 gttcgtggacataaatagtgtgtggcctgataacagaaacctggtagcaggtgatctaatggatcttaattatagactctgataccattttagaaatcgt 273  Q
    |||||||||||||||| ||  ||| || |||| | |||||||  ||||| ||||   ||||||||||||  | || |||||||||||| ||||||||| |    
T  8716285 gttcgtggacataaatggtcggtgacccgatagcggaaacctaatagcatgtgactcaatggatcttaacga-aggctctgataccatattagaaatctt 8716187  T
Q  274 ggttgggcttaacacaaccccataaaatc 302  Q
    |||||||  ||||||||||||| ||||||    
T  8716186 ggttgggtctaacacaaccccacaaaatc 8716158  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 149 - 201
Target Start/End: Original strand, 42049575 - 42049627
Alignment:
Q  149 ctcacgatcagcactattggaattggttcgtggacataaatagtgtgtggcct 201  Q
    ||||||| || |||||||||| ||||||||||||||||||||||| |||||||    
T  42049575 ctcacgagcaacactattggacttggttcgtggacataaatagtgggtggcct 42049627  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 132 - 226
Target Start/End: Original strand, 5675840 - 5675935
Alignment:
Q  132 ggactcttaacacacctc-tcacgatcagcactattggaattggttcgtggacataaatagtgtgtggcctgataacagaaacctggtagcaggtg 226  Q
    |||||||| ||||||||| || ||| ||||||||||||| ||||||||||||||||||| ||| ||| || |||| |  |||| || |||||||||    
T  5675840 ggactctttacacacctcctctcgaccagcactattggacttggttcgtggacataaatggtgggtgacccgatagcgaaaacttgatagcaggtg 5675935  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 250 - 293
Target Start/End: Complemental strand, 10884160 - 10884117
Alignment:
Q  250 ctctgataccattttagaaatcgtggttgggcttaacacaaccc 293  Q
    |||||||||||| ||||||||||||||||||| |||||||||||    
T  10884160 ctctgataccatcttagaaatcgtggttgggcctaacacaaccc 10884117  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 251 - 294
Target Start/End: Original strand, 28213093 - 28213136
Alignment:
Q  251 tctgataccattttagaaatcgtggttgggcttaacacaacccc 294  Q
    ||||||||||| ||||||||||||||||||| ||||||||||||    
T  28213093 tctgataccatattagaaatcgtggttgggcctaacacaacccc 28213136  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 250 - 300
Target Start/End: Complemental strand, 4828164 - 4828114
Alignment:
Q  250 ctctgataccattttagaaatcgtggttgggcttaacacaaccccataaaa 300  Q
    |||||||||||| ||||| ||||||||||||| ||||||||||||| ||||    
T  4828164 ctctgataccatattagagatcgtggttgggcctaacacaaccccacaaaa 4828114  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 250 - 300
Target Start/End: Original strand, 11232182 - 11232232
Alignment:
Q  250 ctctgataccattttagaaatcgtggttgggcttaacacaaccccataaaa 300  Q
    |||||||||||| |||||||| |||||||||| ||||||||||||| ||||    
T  11232182 ctctgataccatcttagaaatggtggttgggcctaacacaaccccacaaaa 11232232  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 250 - 300
Target Start/End: Complemental strand, 17469914 - 17469864
Alignment:
Q  250 ctctgataccattttagaaatcgtggttgggcttaacacaaccccataaaa 300  Q
    |||||||||||| |||||||||||||||| || ||||||||||||| ||||    
T  17469914 ctctgataccatattagaaatcgtggttgagcctaacacaaccccacaaaa 17469864  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 250 - 300
Target Start/End: Original strand, 24532409 - 24532459
Alignment:
Q  250 ctctgataccattttagaaatcgtggttgggcttaacacaaccccataaaa 300  Q
    |||||||||||| ||||||||| ||||||||| ||||||||||||| ||||    
T  24532409 ctctgataccatcttagaaatcatggttgggcctaacacaaccccacaaaa 24532459  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 250 - 300
Target Start/End: Complemental strand, 34842774 - 34842724
Alignment:
Q  250 ctctgataccattttagaaatcgtggttgggcttaacacaaccccataaaa 300  Q
    |||||||||||| |||||||||||||||| || ||||||||||||| ||||    
T  34842774 ctctgataccatattagaaatcgtggttgagcctaacacaaccccacaaaa 34842724  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 250 - 300
Target Start/End: Original strand, 36917427 - 36917477
Alignment:
Q  250 ctctgataccattttagaaatcgtggttgggcttaacacaaccccataaaa 300  Q
    |||||||||||| |||||||| ||||||| |||||||||||||||| ||||    
T  36917427 ctctgataccatcttagaaatggtggttgtgcttaacacaaccccacaaaa 36917477  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 251 - 292
Target Start/End: Original strand, 5590357 - 5590398
Alignment:
Q  251 tctgataccattttagaaatcgtggttgggcttaacacaacc 292  Q
    |||||||||||||||||||| |||||||||| ||||||||||    
T  5590357 tctgataccattttagaaattgtggttgggcctaacacaacc 5590398  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 263 - 300
Target Start/End: Original strand, 22638180 - 22638217
Alignment:
Q  263 ttagaaatcgtggttgggcttaacacaaccccataaaa 300  Q
    ||||||||||||||||||||||||||||||||| ||||    
T  22638180 ttagaaatcgtggttgggcttaacacaaccccacaaaa 22638217  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 261 - 302
Target Start/End: Complemental strand, 39743614 - 39743573
Alignment:
Q  261 ttttagaaatcgtggttgggcttaacacaaccccataaaatc 302  Q
    ||||||||||||||||||||| ||||||||||||| ||||||    
T  39743614 ttttagaaatcgtggttgggcctaacacaaccccacaaaatc 39743573  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 149 - 279
Target Start/End: Original strand, 5675945 - 5676073
Alignment:
Q  149 ctcacgatcagcactattggaattggttcgtggacataaatagtgtgtggcctgataacagaaacctggtagcaggtgatctaatggatcttaattatag 248  Q
    ||||||| ||||| ||||||  ||||||||| ||||||||| ||| ||| ||  ||| |  ||||||| |||||||||  ||| || ||||| |  | ||    
T  5675945 ctcacgaccagcagtattgggcttggttcgtagacataaatggtgggtgacccaatatcgaaaacctgatagcaggtggcctagtgaatcttga--agag 5676042  T
Q  249 actctgataccattttagaaatcgtggttgg 279  Q
    ||||||||| ||| |||||||||||||||||    
T  5676043 actctgatatcatcttagaaatcgtggttgg 5676073  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 250 - 300
Target Start/End: Original strand, 10615144 - 10615194
Alignment:
Q  250 ctctgataccattttagaaatcgtggttgggcttaacacaaccccataaaa 300  Q
    |||||| ||||| |||||||| ||||||||||||||| |||||||| ||||    
T  10615144 ctctgacaccatcttagaaattgtggttgggcttaacgcaaccccacaaaa 10615194  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 250 - 300
Target Start/End: Complemental strand, 16050125 - 16050075
Alignment:
Q  250 ctctgataccattttagaaatcgtggttgggcttaacacaaccccataaaa 300  Q
    |||||||||||| |||||| |||||||||||  ||||||||||||| ||||    
T  16050125 ctctgataccatattagaagtcgtggttgggtctaacacaaccccacaaaa 16050075  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 250 - 300
Target Start/End: Original strand, 26208237 - 26208287
Alignment:
Q  250 ctctgataccattttagaaatcgtggttgggcttaacacaaccccataaaa 300  Q
    |||||||||||| |||||||| |||| ||| | ||||||||||||||||||    
T  26208237 ctctgataccatcttagaaattgtggatggacctaacacaaccccataaaa 26208287  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 250 - 300
Target Start/End: Complemental strand, 37001322 - 37001272
Alignment:
Q  250 ctctgataccattttagaaatcgtggttgggcttaacacaaccccataaaa 300  Q
    |||||||||||| || |||||||||||||||| ||||||||| ||| ||||    
T  37001322 ctctgataccatctttgaaatcgtggttgggcctaacacaactccacaaaa 37001272  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 132 - 240
Target Start/End: Complemental strand, 12688285 - 12688176
Alignment:
Q  132 ggactcttaacacacctc-tcacgatcagcactattggaattggttcgtggacataaatagtgtgtggcctgataacagaaacctggtagcaggtgatct 230  Q
    ||||||||| |||||| | ||| || || |||||||||  || |||||||||||||||| ||| ||||||  |||  ||||||||| |||||||||  |     
T  12688285 ggactcttatcacaccccctcatgaccatcactattgggcttagttcgtggacataaatggtgggtggcccaatagaagaaacctgatagcaggtggccc 12688186  T
Q  231 aatggatctt 240  Q
    ||||||||||    
T  12688185 aatggatctt 12688176  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 263 - 300
Target Start/End: Original strand, 19256587 - 19256624
Alignment:
Q  263 ttagaaatcgtggttgggcttaacacaaccccataaaa 300  Q
    ||||||||||||||||||| ||||||||||||| ||||    
T  19256587 ttagaaatcgtggttgggcctaacacaaccccacaaaa 19256624  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #42
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 263 - 300
Target Start/End: Original strand, 24075307 - 24075344
Alignment:
Q  263 ttagaaatcgtggttgggcttaacacaaccccataaaa 300  Q
    ||||||||||||||||||| ||||||||||||| ||||    
T  24075307 ttagaaatcgtggttgggcctaacacaaccccacaaaa 24075344  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #43
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 263 - 300
Target Start/End: Complemental strand, 27205047 - 27205010
Alignment:
Q  263 ttagaaatcgtggttgggcttaacacaaccccataaaa 300  Q
    ||||||||||||||||||| ||||||||||||| ||||    
T  27205047 ttagaaatcgtggttgggcctaacacaaccccacaaaa 27205010  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #44
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 263 - 300
Target Start/End: Complemental strand, 27205145 - 27205108
Alignment:
Q  263 ttagaaatcgtggttgggcttaacacaaccccataaaa 300  Q
    ||||||||||||||||||| ||||||||||||| ||||    
T  27205145 ttagaaatcgtggttgggcctaacacaaccccacaaaa 27205108  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #45
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 263 - 300
Target Start/End: Complemental strand, 27205243 - 27205206
Alignment:
Q  263 ttagaaatcgtggttgggcttaacacaaccccataaaa 300  Q
    ||||||||||||||||||| ||||||||||||| ||||    
T  27205243 ttagaaatcgtggttgggcctaacacaaccccacaaaa 27205206  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #46
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 263 - 300
Target Start/End: Complemental strand, 34653233 - 34653196
Alignment:
Q  263 ttagaaatcgtggttgggcttaacacaaccccataaaa 300  Q
    ||||||||||||||||||| ||||||||||||| ||||    
T  34653233 ttagaaatcgtggttgggcctaacacaaccccacaaaa 34653196  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #47
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 263 - 300
Target Start/End: Original strand, 35682782 - 35682819
Alignment:
Q  263 ttagaaatcgtggttgggcttaacacaaccccataaaa 300  Q
    ||||||||||||||||||| ||||||||||||| ||||    
T  35682782 ttagaaatcgtggttgggcctaacacaaccccacaaaa 35682819  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #48
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 263 - 300
Target Start/End: Complemental strand, 37001547 - 37001510
Alignment:
Q  263 ttagaaatcgtggttgggcttaacacaaccccataaaa 300  Q
    ||||||||||||||||||| ||||||||||||| ||||    
T  37001547 ttagaaatcgtggttgggcctaacacaaccccacaaaa 37001510  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #49
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 263 - 300
Target Start/End: Complemental strand, 39960275 - 39960238
Alignment:
Q  263 ttagaaatcgtggttgggcttaacacaaccccataaaa 300  Q
    ||||||||||||||||||| ||||||||||||| ||||    
T  39960275 ttagaaatcgtggttgggcctaacacaaccccacaaaa 39960238  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #50
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 263 - 300
Target Start/End: Original strand, 42846606 - 42846643
Alignment:
Q  263 ttagaaatcgtggttgggcttaacacaaccccataaaa 300  Q
    ||||||||||||||||||| ||||||||||||| ||||    
T  42846606 ttagaaatcgtggttgggcctaacacaaccccacaaaa 42846643  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #51
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 247 - 299
Target Start/End: Complemental strand, 29005963 - 29005911
Alignment:
Q  247 agactctgataccattttagaaatcgtggttgggcttaacacaaccccataaa 299  Q
    ||||||| ||||| | ||||||||||||||||||  |||||||||| ||||||    
T  29005963 agactctaataccgtcttagaaatcgtggttgggtctaacacaacctcataaa 29005911  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 59; Significance: 6e-25; HSPs: 35)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 59; E-Value: 6e-25
Query Start/End: Original strand, 132 - 300
Target Start/End: Complemental strand, 25620349 - 25620182
Alignment:
Q  132 ggactcttaacacacctct-cacgatcagcactattggaattggttcgtggacataaatagtgtgtggcctgataacagaaacctggtagcaggtgatct 230  Q
    |||||||||||||||  || ||||| || |||||||||  ||||||||||||||||||| ||| ||||||  ||| | |||||||| |||||||||  |     
T  25620349 ggactcttaacacacaccttcacgaccaacactattgggcttggttcgtggacataaatggtgggtggcccaatagcggaaacctgatagcaggtggccc 25620250  T
Q  231 aatggatcttaattatagactctgataccattttagaaatcgtggttgggcttaacacaaccccataaaa 300  Q
    ||||||||||    | || |||||||||||| ||||||||||||||||||| ||||||||||||| ||||    
T  25620249 aatggatcttgg--agaggctctgataccatcttagaaatcgtggttgggcctaacacaaccccacaaaa 25620182  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 59; E-Value: 6e-25
Query Start/End: Original strand, 132 - 300
Target Start/End: Complemental strand, 29469818 - 29469651
Alignment:
Q  132 ggactcttaacacacctc-tcacgatcagcactattggaattggttcgtggacataaatagtgtgtggcctgataacagaaacctggtagcaggtgatct 230  Q
    |||||||||||||||| | |||||| ||||||||||||  ||| ||||||||||||||| ||| |||||| |||| | ||| |||| || ||||||  |     
T  29469818 ggactcttaacacaccccctcacgaccagcactattgggcttgattcgtggacataaatggtgggtggcccgatagcggaagcctgataacaggtggccc 29469719  T
Q  231 aatggatcttaattatagactctgataccattttagaaatcgtggttgggcttaacacaaccccataaaa 300  Q
    ||||||||||    | || |||||||||||| ||||||||||||||||||| ||||||||||||| ||||    
T  29469718 aatggatcttgg--agaggctctgataccatattagaaatcgtggttgggcctaacacaaccccacaaaa 29469651  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 132 - 295
Target Start/End: Complemental strand, 1596806 - 1596644
Alignment:
Q  132 ggactcttaacacac-ctctcacgatcagcactattggaattggttcgtggacataaatagtgtgtggcctgataacagaaacctggtagcaggtgatct 230  Q
    ||||||||||||||| ||||||||| ||||||||||||  ||||||||||||||||||| ||| |||||| |||| | |||||||| || || |||  |     
T  1596806 ggactcttaacacacactctcacgaccagcactattgggcttggttcgtggacataaatggtgggtggcccgatagcggaaacctgataacatgtggccc 1596707  T
Q  231 aatggatcttaattatagactctgataccattttagaaatcgtggttgggcttaacacaacccca 295  Q
    ||||||||||    | || |||||||||||| |||||||| |||||| ||| |||||||||||||    
T  1596706 aatggatctt--ggagaggctctgataccatcttagaaattgtggttaggcctaacacaacccca 1596644  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 132 - 300
Target Start/End: Original strand, 2404280 - 2404446
Alignment:
Q  132 ggactcttaacacacctctcacgatcagcactattggaattggttcgtggacataaatagtgtgtggcctgataacagaaacctggtagcaggtgatcta 231  Q
    |||||||||||||||||||||||| |||||||||||   ||||||||||||||||||  ||  |||| |  ||| | |||||||| |||||||||| | |    
T  2404280 ggactcttaacacacctctcacgaccagcactattgcgcttggttcgtggacataaacggtaggtggtccaatagcggaaacctgatagcaggtgaccca 2404379  T
Q  232 atggatcttaattatagactctgataccattttagaaatcgtggttgggcttaacacaaccccataaaa 300  Q
    |||||| |  |  | || |||||||||||| |||||||||||||||| |||||||||| ||| ||||||    
T  2404380 atggatttcga--agaggctctgataccatcttagaaatcgtggttgagcttaacacagccctataaaa 2404446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 133 - 308
Target Start/End: Original strand, 36277098 - 36277272
Alignment:
Q  133 gactcttaacacacctc-tcacgatcagcactattggaattggttcgtggacataaatagtgtgtggcctgataacagaaacctggtagcaggtgatcta 231  Q
    ||||||||||||||| | |||||| ||||||||||||  ||||||||||||||||||| ||| |||| | |||| | |||||||| ||| |||||  | |    
T  36277098 gactcttaacacaccccctcacgaccagcactattgggcttggttcgtggacataaatggtgggtggtccgatagcggaaacctgatagtaggtggccca 36277197  T
Q  232 atggatcttaattatagactctgataccattttagaaatcgtggttgggcttaacacaaccccataaaatcaacttg 308  Q
    |||||||||    | || |||||||| ||| ||||||||||||||||||  ||||||||||||| |||||| |||||    
T  36277198 atggatctt--ggagaggctctgataacatcttagaaatcgtggttgggactaacacaaccccacaaaatcgacttg 36277272  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 134 - 300
Target Start/End: Complemental strand, 21861505 - 21861340
Alignment:
Q  134 actcttaacacacctc-tcacgatcagcactattggaattggttcgtggacataaatagtgtgtggcctgataacagaaacctggtagcaggtgatctaa 232  Q
    |||||||||||||| | |||||| |||||||||| |  ||||||||||||||||||| ||| |||||| |||| | |||||||| || ||||||  | ||    
T  21861505 actcttaacacaccccctcacgaccagcactattaggcttggttcgtggacataaatggtgggtggcccgatagcggaaacctgataacaggtggcccaa 21861406  T
Q  233 tggatcttaattatagactctgataccattttagaaatcgtggttgggcttaacacaaccccataaaa 300  Q
    ||||||||    | || |||||||||||| |||||||| |||||||||| |||||||| |||| ||||    
T  21861405 tggatctt--ggagaggctctgataccatcttagaaatggtggttgggcctaacacaatcccacaaaa 21861340  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 132 - 300
Target Start/End: Complemental strand, 33834404 - 33834237
Alignment:
Q  132 ggactcttaacacacctct-cacgatcagcactattggaattggttcgtggacataaatagtgtgtggcctgataacagaaacctggtagcaggtgatct 230  Q
    ||||||||||| |||| || ||||| || |||||||||  ||||||||||||||||||| ||| |||||| ||||    ||||||| |||||||||  |     
T  33834404 ggactcttaacccaccccttcacgaccaacactattgggcttggttcgtggacataaatggtgggtggcccgatagggaaaacctgatagcaggtggccc 33834305  T
Q  231 aatggatcttaattatagactctgataccattttagaaatcgtggttgggcttaacacaaccccataaaa 300  Q
    ||||||||||    | || |||||||||||| |||||||| |||||||||| ||||||||||||| ||||    
T  33834304 aatggatcttgg--agaggctctgataccatcttagaaatggtggttgggcctaacacaaccccacaaaa 33834237  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 132 - 300
Target Start/End: Original strand, 33996185 - 33996349
Alignment:
Q  132 ggactcttaacacac-ctctcacgatcagcactattggaattggttcgtggacataaatagtgtgtggcctgataacagaaacctggtagcaggtgatct 230  Q
    ||||||||||| ||| | |||||||||| |||||||||  ||||||||||||||||||| ||| |||||| |||  | |||||||| |||||||||  |     
T  33996185 ggactcttaactcacaccctcacgatcaacactattgggcttggttcgtggacataaatggtgggtggcccgattgcggaaacctgatagcaggtggccc 33996284  T
Q  231 aatggatcttaattatagactctgataccattttagaaatcgtggttgggcttaacacaaccccataaaa 300  Q
    |||||||       | || |||||||||||| ||||||||||||||||||| ||||||||| ||| ||||    
T  33996285 aatggat-----ggagaggctctgataccatcttagaaatcgtggttgggcctaacacaactccacaaaa 33996349  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 133 - 300
Target Start/End: Complemental strand, 4507142 - 4506978
Alignment:
Q  133 gactcttaacacacctctcacgatcagcactattggaattggttcgtggacataaatagtgtgtggcctgataacagaaacctggtagcaggtgatctaa 232  Q
    ||||||||||||||  ||||||| || ||||||| |  |||||| |||||||||| | ||  |||| |||||||| |||| ||| |||||||||| | ||    
T  4507142 gactcttaacacactcctcacgaccaacactattagg-ttggtttgtggacataactggttggtggtctgataacggaaatctgatagcaggtgacccaa 4507044  T
Q  233 tggatcttaattatagactctgataccattttagaaatcgtggttgggcttaacacaaccccataaaa 300  Q
    |||||||| |  | || ||||||||| || ||||||||||| ||||||  ||||||||||||||||||    
T  4507043 tggatcttga--aaaggctctgatacaatcttagaaatcgtagttgggtctaacacaaccccataaaa 4506978  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 149 - 292
Target Start/End: Complemental strand, 4886524 - 4886383
Alignment:
Q  149 ctcacgatcagcactattggaattggttcgtggacataaatagtgtgtggcctgataacagaaacctggtagcaggtgatctaatggatcttaattatag 248  Q
    ||||||| ||| ||||||||  ||||||||||||||||||| ||| |||||  ||||  |||||| || |||||||||  | ||||||||||    | ||    
T  4886524 ctcacgaccagtactattgggcttggttcgtggacataaatggtgggtggctcgatagtagaaacttgatagcaggtggcccaatggatcttgg--agag 4886427  T
Q  249 actctgataccattttagaaatcgtggttgggcttaacacaacc 292  Q
    || |||||||||| ||||||||||||||||||| ||||||||||    
T  4886426 accctgataccatcttagaaatcgtggttgggcctaacacaacc 4886383  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 133 - 226
Target Start/End: Complemental strand, 31892364 - 31892270
Alignment:
Q  133 gactcttaacacacctc-tcacgatcagcactattggaattggttcgtggacataaatagtgtgtggcctgataacagaaacctggtagcaggtg 226  Q
    ||||||||||||||| | |||||| || || ||||||  ||||||||||||||||||| ||| ||||||||||||| |||||||| |||||||||    
T  31892364 gactcttaacacaccccctcacgaccatcattattgggcttggttcgtggacataaatggtgggtggcctgataacggaaacctgatagcaggtg 31892270  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 132 - 226
Target Start/End: Original strand, 40746139 - 40746233
Alignment:
Q  132 ggactcttaacacacctctcacgatcagcactattggaattggttcgtggacataaatagtgtgtggcctgataacagaaacctggtagcaggtg 226  Q
    |||||||||||||||| ||||||| ||||||||||||  ||||||||||||||||||| ||| ||||   ||||||  ||||||| |||||||||    
T  40746139 ggactcttaacacacccctcacgaccagcactattgggcttggttcgtggacataaatggtgggtggttcgataacgaaaacctgatagcaggtg 40746233  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 132 - 223
Target Start/End: Original strand, 3519831 - 3519923
Alignment:
Q  132 ggactcttaacacacctc-tcacgatcagcactattggaattggttcgtggacataaatagtgtgtggcctgataacagaaacctggtagcag 223  Q
    |||||||||||||||| | |||||| ||||| ||||||  ||||||||||||||||||| ||| |||||| |||| | |||||||| ||||||    
T  3519831 ggactcttaacacaccccctcacgaccagcattattgggcttggttcgtggacataaatggtgggtggcccgatagcggaaacctgatagcag 3519923  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 245 - 300
Target Start/End: Original strand, 40121907 - 40121962
Alignment:
Q  245 atagactctgataccattttagaaatcgtggttgggcttaacacaaccccataaaa 300  Q
    |||| |||||||||||| ||||||||||||||||||| ||||||||||||| ||||    
T  40121907 ataggctctgataccatcttagaaatcgtggttgggcctaacacaaccccacaaaa 40121962  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 160 - 290
Target Start/End: Original strand, 48661455 - 48661583
Alignment:
Q  160 cactattggaattggttcgtggacataaatagtgtgtggcctgataacagaaacctggtagcaggtgatctaatggatcttaattatagactctgatacc 259  Q
    |||||||||  ||||||||||||||||||| ||| |||||| || | | |||||||| |||||||||    ||||| ||||||  | || |||||||| |    
T  48661455 cactattgggcttggttcgtggacataaatggtgggtggcccgaaagcggaaacctgatagcaggtggctcaatggttcttaa--agaggctctgatatc 48661552  T
Q  260 attttagaaatcgtggttgggcttaacacaa 290  Q
    || ||||||||||||||||||  ||||||||    
T  48661553 atattagaaatcgtggttgggtctaacacaa 48661583  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 250 - 300
Target Start/End: Original strand, 31257255 - 31257305
Alignment:
Q  250 ctctgataccattttagaaatcgtggttgggcttaacacaaccccataaaa 300  Q
    |||||||||||| ||||||||||||||||||| ||||||||||||| ||||    
T  31257255 ctctgataccatattagaaatcgtggttgggcctaacacaaccccacaaaa 31257305  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 134 - 279
Target Start/End: Original strand, 36993182 - 36993325
Alignment:
Q  134 actcttaacacacctctcacgatcagcactattggaattggttcgtggacataaatagtgtgtggcctgataacagaaacctggtagcaggtgatctaat 233  Q
    |||||||||||||  ||||||| ||||||||||| | ||| |||||| |||||||||||| |||| |  ||| | |||| ||| ||||| |||  | |||    
T  36993182 actcttaacacacacctcacgaccagcactattgaacttgattcgtgaacataaatagtgggtggtccaatagcggaaatctgatagcacgtggcccaat 36993281  T
Q  234 ggatcttaattatagactctgataccattttagaaatcgtggttgg 279  Q
    ||||||| |  | || |||||||||||| ||||||||| |||||||    
T  36993282 ggatcttga--agaggctctgataccatcttagaaatcatggttgg 36993325  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 209 - 302
Target Start/End: Original strand, 44874527 - 44874618
Alignment:
Q  209 gaaacctggtagcaggtgatctaatggatcttaattatagactctgataccattttagaaatcgtggttgggcttaacacaaccccataaaatc 302  Q
    |||||||| |||||||||| | |||||||||| |  | ||||||||||||||| ||||| || |||||| ||| |||||||| |||||||||||    
T  44874527 gaaacctgatagcaggtgacccaatggatcttga--agagactctgataccatcttagacattgtggtttggcctaacacaagcccataaaatc 44874618  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 250 - 295
Target Start/End: Original strand, 10882227 - 10882272
Alignment:
Q  250 ctctgataccattttagaaatcgtggttgggcttaacacaacccca 295  Q
    |||||||||||| ||||||||||||||||||| |||||||||||||    
T  10882227 ctctgataccatcttagaaatcgtggttgggcctaacacaacccca 10882272  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 250 - 302
Target Start/End: Complemental strand, 21821902 - 21821850
Alignment:
Q  250 ctctgataccattttagaaatcgtggttgggcttaacacaaccccataaaatc 302  Q
    |||||||||||| ||||||||||||||||||| |||||||| |||| ||||||    
T  21821902 ctctgataccatcttagaaatcgtggttgggcctaacacaatcccacaaaatc 21821850  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 250 - 300
Target Start/End: Complemental strand, 6782957 - 6782907
Alignment:
Q  250 ctctgataccattttagaaatcgtggttgggcttaacacaaccccataaaa 300  Q
    |||||||||||| |||||||||||||||| || ||||||||||||| ||||    
T  6782957 ctctgataccatgttagaaatcgtggttgagcctaacacaaccccacaaaa 6782907  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 250 - 300
Target Start/End: Complemental strand, 17202275 - 17202225
Alignment:
Q  250 ctctgataccattttagaaatcgtggttgggcttaacacaaccccataaaa 300  Q
    |||||||||||| ||| ||||||||||||||| ||||||||||||| ||||    
T  17202275 ctctgataccatattaaaaatcgtggttgggcctaacacaaccccacaaaa 17202225  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 250 - 300
Target Start/End: Complemental strand, 34027489 - 34027439
Alignment:
Q  250 ctctgataccattttagaaatcgtggttgggcttaacacaaccccataaaa 300  Q
    |||| ||||||| ||||||||||||||||||| ||||||||||||| ||||    
T  34027489 ctctaataccatattagaaatcgtggttgggcctaacacaaccccacaaaa 34027439  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 263 - 308
Target Start/End: Original strand, 43085538 - 43085583
Alignment:
Q  263 ttagaaatcgtggttgggcttaacacaaccccataaaatcaacttg 308  Q
    |||||||||||||||| |||||||||||||||| |||| |||||||    
T  43085538 ttagaaatcgtggttgagcttaacacaaccccacaaaaccaacttg 43085583  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 252 - 300
Target Start/End: Original strand, 2544437 - 2544485
Alignment:
Q  252 ctgataccattttagaaatcgtggttgggcttaacacaaccccataaaa 300  Q
    |||||||||| ||| ||||||||||||||| ||||||||||||| ||||    
T  2544437 ctgataccatattaaaaatcgtggttgggcctaacacaaccccacaaaa 2544485  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 250 - 302
Target Start/End: Complemental strand, 40746361 - 40746309
Alignment:
Q  250 ctctgataccattttagaaatcgtggttgggcttaacacaaccccataaaatc 302  Q
    |||| ||||||| |||||||| |||||||||| ||||||||||||| ||||||    
T  40746361 ctctaataccatattagaaattgtggttgggcctaacacaaccccacaaaatc 40746309  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 171 - 278
Target Start/End: Complemental strand, 20305467 - 20305358
Alignment:
Q  171 ttggttcgtggacataaatagtgtgtggcctgataacagaaacctggtagcaggtg----atctaatggatcttaattatagactctgataccattttag 266  Q
    ||||||||||||||||||| ||| |||||| |||| | |||||||| |||||| ||    ||| |||||||||| |  | || |||||||||||| |||     
T  20305467 ttggttcgtggacataaatggtgggtggcccgatagcggaaacctgatagcagatgacccatccaatggatcttga--agaggctctgataccatcttaa 20305370  T
Q  267 aaatcgtggttg 278  Q
    ||||||||||||    
T  20305369 aaatcgtggttg 20305358  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 149 - 226
Target Start/End: Original strand, 3519928 - 3520005
Alignment:
Q  149 ctcacgatcagcactattggaattggttcgtggacataaatagtgtgtggcctgataacagaaacctggtagcaggtg 226  Q
    ||||||| ||||||||||||  ||||||||||||||||||| ||| ||| || |||| |  ||||| | |||||||||    
T  3519928 ctcacgaccagcactattgggcttggttcgtggacataaatggtgggtgtcccgatagcgaaaaccagatagcaggtg 3520005  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 250 - 287
Target Start/End: Original strand, 6001658 - 6001695
Alignment:
Q  250 ctctgataccattttagaaatcgtggttgggcttaaca 287  Q
    |||||||||||| ||||||||||||||||| |||||||    
T  6001658 ctctgataccatcttagaaatcgtggttggacttaaca 6001695  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 250 - 295
Target Start/End: Original strand, 26239904 - 26239949
Alignment:
Q  250 ctctgataccattttagaaatcgtggttgggcttaacacaacccca 295  Q
    |||||||||||| |||||||| |||||||||  |||||||||||||    
T  26239904 ctctgataccatcttagaaattgtggttgggtctaacacaacccca 26239949  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 247 - 300
Target Start/End: Original strand, 26562058 - 26562111
Alignment:
Q  247 agactctgataccattttagaaatcgtggttgggcttaacacaaccccataaaa 300  Q
    ||||||||||||||| |||||||| ||||||| || ||||| ||||||| ||||    
T  26562058 agactctgataccatattagaaatggtggttgagcctaacataaccccacaaaa 26562111  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 263 - 308
Target Start/End: Original strand, 43075311 - 43075356
Alignment:
Q  263 ttagaaatcgtggttgggcttaacacaaccccataaaatcaacttg 308  Q
    |||||||||||||||| ||| |||||||||||| |||| |||||||    
T  43075311 ttagaaatcgtggttgagctcaacacaaccccacaaaaccaacttg 43075356  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 247 - 300
Target Start/End: Original strand, 48243422 - 48243475
Alignment:
Q  247 agactctgataccattttagaaatcgtggttgggcttaacacaaccccataaaa 300  Q
    ||||||||||||||| ||| ||||| ||||||||  ||||||||||||| ||||    
T  48243422 agactctgataccatcttaaaaatcatggttgggtctaacacaaccccacaaaa 48243475  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 250 - 302
Target Start/End: Original strand, 23796011 - 23796063
Alignment:
Q  250 ctctgataccattttagaaatcgtggttgggcttaacacaaccccataaaatc 302  Q
    |||||||||||| ||| ||||| |||||| || ||||||| ||||||||||||    
T  23796011 ctctgataccatcttaaaaatcatggttgagcctaacacatccccataaaatc 23796063  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 263 - 295
Target Start/End: Original strand, 43688161 - 43688193
Alignment:
Q  263 ttagaaatcgtggttgggcttaacacaacccca 295  Q
    ||||||||||||||||||| |||||||||||||    
T  43688161 ttagaaatcgtggttgggcctaacacaacccca 43688193  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0692 (Bit Score: 55; Significance: 1e-22; HSPs: 1)
Name: scaffold0692
Description:

Target: scaffold0692; HSP #1
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 149 - 294
Target Start/End: Original strand, 5643 - 5786
Alignment:
Q  149 ctcacgatcagcactattggaattggttcgtggacataaatagtgtgtggcctgataacagaaacctggtagcaggtgatctaatggatcttaattatag 248  Q
    ||||||| ||||||||||||  ||||||||||||||||||| ||| |||| | |||| | |||||||| |||||||||    ||||||||||    | ||    
T  5643 ctcacgaccagcactattgggcttggttcgtggacataaatggtgggtggtccgatagcggaaacctgatagcaggtggctcaatggatctt--ggagag 5740  T
Q  249 actctgataccattttagaaatcgtggttgggcttaacacaacccc 294  Q
     |||||||||||| ||||||||||||||||||| ||||||||||||    
T  5741 gctctgataccatcttagaaatcgtggttgggcctaacacaacccc 5786  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0519 (Bit Score: 55; Significance: 1e-22; HSPs: 1)
Name: scaffold0519
Description:

Target: scaffold0519; HSP #1
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 132 - 300
Target Start/End: Complemental strand, 2129 - 1962
Alignment:
Q  132 ggactcttaacacacctc-tcacgatcagcactattggaattggttcgtggacataaatagtgtgtggcctgataacagaaacctggtagcaggtgatct 230  Q
    |||||||||||||||| | |||||| ||||||||||||  ||||||||||||||||||| ||| ||| |  |||| | |||||||| || ||||||  |     
T  2129 ggactcttaacacaccccctcacgaccagcactattgggcttggttcgtggacataaatggtgggtgactcgatagcggaaacctgataacaggtggccc 2030  T
Q  231 aatggatcttaattatagactctgataccattttagaaatcgtggttgggcttaacacaaccccataaaa 300  Q
    ||||||||||    | || |||||||||||| |||||||| |||||||||| ||||||||||||| ||||    
T  2029 aatggatctt--ggagaggctctgataccatcttagaaatggtggttgggcctaacacaaccccacaaaa 1962  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0048 (Bit Score: 47; Significance: 8e-18; HSPs: 1)
Name: scaffold0048
Description:

Target: scaffold0048; HSP #1
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 132 - 300
Target Start/End: Complemental strand, 82054 - 81888
Alignment:
Q  132 ggactcttaacacacctc-tcacgatcagcactattggaattggttcgtggacataaatagtgtgtggcctgataacagaaacctggtagcaggtgatct 230  Q
    |||||||||||||||| | |||||| ||||||||||||  ||||||| ||||||||||| ||| |||||  |||    |||||||| || |||||  ||     
T  82054 ggactcttaacacaccccctcacgaccagcactattgggcttggttcatggacataaatggtgcgtggctcgatgtg-gaaacctgataacaggtagtcc 81956  T
Q  231 aatggatcttaattatagactctgataccattttagaaatcgtggttgggcttaacacaaccccataaaa 300  Q
    ||||||||||    | || |||||||||||| ||||||||||||||||||| ||||||||||||| ||||    
T  81955 aatggatcttgg--agaggctctgataccatcttagaaatcgtggttgggcctaacacaaccccacaaaa 81888  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0092 (Bit Score: 41; Significance: 0.00000000000003; HSPs: 1)
Name: scaffold0092
Description:

Target: scaffold0092; HSP #1
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 138 - 300
Target Start/End: Complemental strand, 5862 - 5701
Alignment:
Q  138 ttaacacacctctcacgatcagcactatt-ggaattggttcgtggacataaatagtgtgtggcctgataacagaaacctggtagcaggtgatctaatgga 236  Q
    |||||||||| ||||||| ||||| |||| ||  ||||||||||| ||||||  ||| |||    |||||| |||||||| |||||||||  | ||||||    
T  5862 ttaacacacccctcacgaccagcattatttgggcttggttcgtgggcataaacggtgggtgattcgataacggaaacctgatagcaggtggcccaatgga 5763  T
Q  237 tcttaattatagactctgataccattttagaaatcgtggttgggcttaacacaaccccataaaa 300  Q
    | || |  | || |||||||||||| ||||||||||||||||||  ||||||||||||| ||||    
T  5762 ttttga--agaggctctgataccatcttagaaatcgtggttgggtctaacacaaccccacaaaa 5701  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0005 (Bit Score: 39; Significance: 0.0000000000005; HSPs: 1)
Name: scaffold0005
Description:

Target: scaffold0005; HSP #1
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 250 - 300
Target Start/End: Complemental strand, 56555 - 56505
Alignment:
Q  250 ctctgataccattttagaaatcgtggttgggcttaacacaaccccataaaa 300  Q
    |||||||||||| ||||||||||||||||||| ||||||||||||| ||||    
T  56555 ctctgataccatattagaaatcgtggttgggcctaacacaaccccacaaaa 56505  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0366 (Bit Score: 38; Significance: 0.000000000002; HSPs: 2)
Name: scaffold0366
Description:

Target: scaffold0366; HSP #1
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 133 - 240
Target Start/End: Complemental strand, 14617 - 14508
Alignment:
Q  133 gactcttaacacacctc-tcacgatcagcactattggaattggttcgtggacataaatagtgtgtggcctgata-acagaaacctggtagcaggtgatct 230  Q
    ||||||||||||||| | |||||| || |||||||||  ||||||| ||||||||||||||| ||| || ||||  | |||||||| ||||||||| ||     
T  14617 gactcttaacacaccccatcacgaccaacactattgggcttggttcatggacataaatagtgggtgacccgataggcggaaacctgatagcaggtggtcc 14518  T
Q  231 aatggatctt 240  Q
    ||||||||||    
T  14517 aatggatctt 14508  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0366; HSP #2
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 133 - 240
Target Start/End: Complemental strand, 10951 - 10842
Alignment:
Q  133 gactcttaacacacctc-tcacgatcagcactattggaattggttcgtggacataaatagtgtgtggcctgata-acagaaacctggtagcaggtgatct 230  Q
    ||||||||||||||| | |||||| || |||||||||  ||||||| ||||||||||||||| ||| ||  |||  | |||||||| ||||||||| ||     
T  10951 gactcttaacacaccccatcacgaccaacactattgggcttggttcatggacataaatagtgggtgacccaataggcggaaacctgatagcaggtggtcc 10852  T
Q  231 aatggatctt 240  Q
    ||||||||||    
T  10851 aatggatctt 10842  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0729 (Bit Score: 36; Significance: 0.00000000003; HSPs: 1)
Name: scaffold0729
Description:

Target: scaffold0729; HSP #1
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 132 - 222
Target Start/End: Complemental strand, 2707 - 2616
Alignment:
Q  132 ggactcttaacacacctc-tcacgatcagcactattggaattggttcgtggacataaatagtgtgtggcctgataacagaaacctggtagca 222  Q
    |||||||||||||||| | ||||||||||||||||| |  ||||||||| ||||||||| | | |||||| |||| | |||||||| |||||    
T  2707 ggactcttaacacaccccctcacgatcagcactattaggtttggttcgtagacataaatggggggtggcccgatagcggaaacctgatagca 2616  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0129 (Bit Score: 35; Significance: 0.0000000001; HSPs: 1)
Name: scaffold0129
Description:

Target: scaffold0129; HSP #1
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 250 - 300
Target Start/End: Complemental strand, 14399 - 14349
Alignment:
Q  250 ctctgataccattttagaaatcgtggttgggcttaacacaaccccataaaa 300  Q
    |||||||||||| ||||||| ||||||||||| ||||||||||||| ||||    
T  14399 ctctgataccatcttagaaaacgtggttgggcctaacacaaccccacaaaa 14349  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0459 (Bit Score: 34; Significance: 0.0000000005; HSPs: 1)
Name: scaffold0459
Description:

Target: scaffold0459; HSP #1
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 133 - 240
Target Start/End: Complemental strand, 13310 - 13201
Alignment:
Q  133 gactcttaacacacctc-tcacgatcagcactattggaattggttcgtggacataaatagtgtgtggcctgata-acagaaacctggtagcaggtgatct 230  Q
    ||||||||||||||| | |||||| || |||||||||  ||||||| ||||||||||||||| ||| ||  |||  | |||||||| ||||||||| ||     
T  13310 gactcttaacacaccccatcacgaccaacactattgggcttggttcatggacataaatagtgggtgacccaataggcggaaacctgatagcaggtggtcc 13211  T
Q  231 aatggatctt 240  Q
    ||||||||||    
T  13210 aatggatctt 13201  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0181 (Bit Score: 34; Significance: 0.0000000005; HSPs: 1)
Name: scaffold0181
Description:

Target: scaffold0181; HSP #1
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 263 - 300
Target Start/End: Complemental strand, 21022 - 20985
Alignment:
Q  263 ttagaaatcgtggttgggcttaacacaaccccataaaa 300  Q
    ||||||||||||||||||||||||||||||||| ||||    
T  21022 ttagaaatcgtggttgggcttaacacaaccccacaaaa 20985  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0211 (Bit Score: 33; Significance: 0.000000002; HSPs: 1)
Name: scaffold0211
Description:

Target: scaffold0211; HSP #1
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 250 - 302
Target Start/End: Original strand, 24622 - 24674
Alignment:
Q  250 ctctgataccattttagaaatcgtggttgggcttaacacaaccccataaaatc 302  Q
    |||||||||||| |||||| | |||||||||||||| ||||| ||||||||||    
T  24622 ctctgataccatcttagaatttgtggttgggcttaatacaacgccataaaatc 24674  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0481 (Bit Score: 31; Significance: 0.00000003; HSPs: 1)
Name: scaffold0481
Description:

Target: scaffold0481; HSP #1
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 250 - 300
Target Start/End: Original strand, 3459 - 3509
Alignment:
Q  250 ctctgataccattttagaaatcgtggttgggcttaacacaaccccataaaa 300  Q
    |||||||||||| |||||||||||| |||||  ||||||||||||| ||||    
T  3459 ctctgataccatattagaaatcgtgattgggtctaacacaaccccacaaaa 3509  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0766 (Bit Score: 30; Significance: 0.0000001; HSPs: 1)
Name: scaffold0766
Description:

Target: scaffold0766; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 265 - 302
Target Start/End: Complemental strand, 6355 - 6318
Alignment:
Q  265 agaaatcgtggttgggcttaacacaaccccataaaatc 302  Q
    ||||||||||||||||| ||||||||||||| ||||||    
T  6355 agaaatcgtggttgggcctaacacaaccccacaaaatc 6318  T

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Target: scaffold0400 (Bit Score: 30; Significance: 0.0000001; HSPs: 1)
Name: scaffold0400
Description:

Target: scaffold0400; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 251 - 300
Target Start/End: Complemental strand, 3940 - 3891
Alignment:
Q  251 tctgataccattttagaaatcgtggttgggcttaacacaaccccataaaa 300  Q
    ||||||||||| |||||||| ||||||| || ||||||||||||| ||||    
T  3940 tctgataccatattagaaattgtggttgtgcctaacacaaccccacaaaa 3891  T

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Target: scaffold0365 (Bit Score: 30; Significance: 0.0000001; HSPs: 1)
Name: scaffold0365
Description:

Target: scaffold0365; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 251 - 300
Target Start/End: Complemental strand, 4584 - 4535
Alignment:
Q  251 tctgataccattttagaaatcgtggttgggcttaacacaaccccataaaa 300  Q
    ||||||||||| |||||||| ||||||| || ||||||||||||| ||||    
T  4584 tctgataccatattagaaattgtggttgtgcctaacacaaccccacaaaa 4535  T

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Target: scaffold0045 (Bit Score: 29; Significance: 0.0000005; HSPs: 1)
Name: scaffold0045
Description:

Target: scaffold0045; HSP #1
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 250 - 302
Target Start/End: Original strand, 41194 - 41246
Alignment:
Q  250 ctctgataccattttagaaatcgtggttgggcttaacacaaccccataaaatc 302  Q
    |||||||||||| ||||||||||| |||| || ||| ||||||||| ||||||    
T  41194 ctctgataccatcttagaaatcgtagttgagcctaatacaaccccacaaaatc 41246  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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