View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF10189_low_11 (Length: 322)
Name: NF10189_low_11
Description: NF10189
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF10189_low_11 |
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Alignment Details
Target: chr4 (Bit Score: 267; Significance: 1e-149; HSPs: 1)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 267; E-Value: 1e-149
Query Start/End: Original strand, 13 - 307
Target Start/End: Complemental strand, 2620342 - 2620049
Alignment:
| Q |
13 |
cataatgcatatttctaaataatcctacaaattctttattcagaacaatcaatcacattgaacactgataaagaaacggttcgtttgggagagtggccat |
112 |
Q |
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| T |
2620342 |
cataatgcatatttctaaataatcctacaaattctttattcagaacaatcaatcacattgaacactcataaagaaacggtttgtttgggagagtggccat |
2620243 |
T |
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| Q |
113 |
caacctccaagtcgaagaaggcatgtcaattcaccgtgatataaaaaagctgcaataaatagcttctaactcaacatgcgttcaccattcccccaacgcc |
212 |
Q |
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||||||| |||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||| |
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| T |
2620242 |
caacctc-aagtcgaagaagccatgtcaattcaccgtgatataaaaaagctgcaataaatagcttctaactcaacatgcgttcaccattccccaaacgcc |
2620144 |
T |
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| Q |
213 |
aaaacaaacacataaaatcagctggttacatatggttatgcttgcattatcaccaacaaaatttgtcaagttccaagacacggacctgttgcatt |
307 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||| |
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| T |
2620143 |
aaaacaaacacataaaatcagctggttacatatggttatgcttgcattatcaccaacaaaatttggcaagttccaagacacggacctgttgcatt |
2620049 |
T |
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