View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF10190_high_10 (Length: 242)
Name: NF10190_high_10
Description: NF10190
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF10190_high_10 |
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Alignment Details
Target: chr5 (Bit Score: 185; Significance: 1e-100; HSPs: 1)
Name: chr5
Description:
Target: chr5; HSP #1
Raw Score: 185; E-Value: 1e-100
Query Start/End: Original strand, 1 - 223
Target Start/End: Original strand, 7559574 - 7559799
Alignment:
| Q |
1 |
tcattgcacttgtggatgtggttgctccatgcatgtatcttagtaatatcattttccattgcctcttgtt---attaatttttgtgtgtaaaaatgttgt |
97 |
Q |
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| T |
7559574 |
tcattgcacttgtggatgtggttgctccatgcatgtatcttagtaatatcattttccactgcctcttgttgttattaatttttgtgtgtaaaaatgttgt |
7559673 |
T |
|
| Q |
98 |
gatggtaaatggaaatttc-ttgtgtcaacattagttttaatttgtggtatgcccaatttaagtgagatcacagtcaatggttttagcattcatcaattt |
196 |
Q |
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||||||||||||||||||| ||||||| |||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
7559674 |
gatggtaaatggaaatttccttgtgtctacattagttttaatttgtggcatgcccaatttaagtgagatcacagtcaatggttttagcattcatcaattt |
7559773 |
T |
|
| Q |
197 |
aagtggagacctgtcagatatgttggg |
223 |
Q |
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|||| |||||||||||||||||||||| |
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| T |
7559774 |
aagt-gagacctgtcagatatgttggg |
7559799 |
T |
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