View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF10190_low_20 (Length: 284)
Name: NF10190_low_20
Description: NF10190
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF10190_low_20 |
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Alignment Details
Target: chr8 (Bit Score: 248; Significance: 1e-138; HSPs: 1)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 248; E-Value: 1e-138
Query Start/End: Original strand, 1 - 271
Target Start/End: Complemental strand, 11845420 - 11845145
Alignment:
| Q |
1 |
tcaacaagatagggaaaaaagcatacagagaagacgctagttgtggatctata-----cttaatcacatactaaaaaagacaaagtttagccaagatgtc |
95 |
Q |
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|||||||||||||||||||| || ||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||| |
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| T |
11845420 |
tcaacaagatagggaaaaaaacagacagagaagacgctagttgtggatctatagtatacttaatcacatactaaaaaagacaaagtttagccaagatgtc |
11845321 |
T |
|
| Q |
96 |
tctcataagacaaagcttggtcaactatatgtcacaagtgttaacatataatatataatacaatactgtattttaccgtgaaatccttcatttttctact |
195 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
11845320 |
tctcataagacaaagcttggtcaactatatgtcacaagtgttaacatataatatataatacaatactgtattttaccgtgaaatccttcatttttctact |
11845221 |
T |
|
| Q |
196 |
ttctagatagataggtaaggtatgaagtaacctgaaaaagtaatacagaaaatgtagctcgtccatgtcgtgatgt |
271 |
Q |
| |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
11845220 |
ttctagatagataggtaaggtatgaagtaacctgaaaaagtaatacagaaaatgtagctcgtccatgtcgtgatgt |
11845145 |
T |
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Target: chr7 (Bit Score: 39; Significance: 0.0000000000004; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 225 - 271
Target Start/End: Original strand, 28914664 - 28914710
Alignment:
| Q |
225 |
acctgaaaaagtaatacagaaaatgtagctcgtccatgtcgtgatgt |
271 |
Q |
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|||||||||||||| ||||||||||||||||||||||| |||||||| |
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| T |
28914664 |
acctgaaaaagtaaaacagaaaatgtagctcgtccatgccgtgatgt |
28914710 |
T |
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