View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF10190_low_24 (Length: 259)
Name: NF10190_low_24
Description: NF10190
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF10190_low_24 |
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Alignment Details
Target: chr4 (Bit Score: 224; Significance: 1e-123; HSPs: 1)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 224; E-Value: 1e-123
Query Start/End: Original strand, 18 - 249
Target Start/End: Original strand, 25377756 - 25377986
Alignment:
| Q |
18 |
gtttgaagaaattgaagtggtgatcaaattaatccatgctgtttagagtagtataatgattactcatgtttggtctacaatagttataagcttcattgtt |
117 |
Q |
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| T |
25377756 |
gtttgaagaaattgaagtggtgatcaaattaatccatgctgtttagagtagtataatgattactcatgtttggtctacaatagttataagcttcattgtt |
25377855 |
T |
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| Q |
118 |
ccgccttaagtcacaagcgagtaattcttctattacttgaagattgaatgaagttagggcctagtcggtcttctcctttctgctttaattaccaaaaacc |
217 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||| |
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| T |
25377856 |
ccgccttaagtcacaagcgagtaattcttctattacttgaagattgaatgaagttagggcctagtcggtcttctcctttctgctttaattacc-aaaacc |
25377954 |
T |
|
| Q |
218 |
gaccttaaataaaccacctctctatctctctg |
249 |
Q |
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|||||||||||||||||||||||||||||||| |
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| T |
25377955 |
gaccttaaataaaccacctctctatctctctg |
25377986 |
T |
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