View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF10191_high_7 (Length: 356)
Name: NF10191_high_7
Description: NF10191
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF10191_high_7 |
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Alignment Details
Target: chr1 (Bit Score: 294; Significance: 1e-165; HSPs: 1)
Name: chr1
Description:
Target: chr1; HSP #1
Raw Score: 294; E-Value: 1e-165
Query Start/End: Original strand, 19 - 344
Target Start/End: Complemental strand, 33306194 - 33305862
Alignment:
| Q |
19 |
taattacactttaccaccctctctcaaggtggaatatatatccaatgttccaagcttgttttccaatgaggtaaatggtcatggatgaagaggtttggtg |
118 |
Q |
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| T |
33306194 |
taattacactttaccaccctctctcaaggtggaatatatatccaatgttccaagcttgttttccaatgaggtaaatggtcatggatgaagaggtttggtg |
33306095 |
T |
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| Q |
119 |
agaatatctgccacttgttcatttgaggagataggcagtaggtgaagaattcctgattgaaatttatctctcactacatggcagtctatttctatgtgat |
218 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||| |
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| T |
33306094 |
agaatatctgccacttgttcatttgaggagataggcagtaggtgaagaattcctgattgaaatttatctctcaccacatggcagtctatttctatgtgat |
33305995 |
T |
|
| Q |
219 |
ttgta--ctcatgaaaactggattagctgctatgtgcatagctgatttattgtcacagt-----atgattggtgaagaatgagatatttgaaaatcctgc |
311 |
Q |
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||||| |||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||| |
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| T |
33305994 |
ttgtactctcatgaaaactggattagctgctatgtgcatagctgatttattgtcacagtagatgatgattggtgaagaatgagatatttgaaaatcctgc |
33305895 |
T |
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| Q |
312 |
aataagtatggcagcaattacccttcacaggtt |
344 |
Q |
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||||||||||||||||||| ||||||||||||| |
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| T |
33305894 |
aataagtatggcagcaattgcccttcacaggtt |
33305862 |
T |
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