View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

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 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF10191_low_10 (Length: 372)

Name: NF10191_low_10
Description: NF10191
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF10191_low_10
NF10191_low_10
[»] chr7 (1 HSPs)
chr7 (36-323)||(33302982-33303273)


Alignment Details
Target: chr7 (Bit Score: 252; Significance: 1e-140; HSPs: 1)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 252; E-Value: 1e-140
Query Start/End: Original strand, 36 - 323
Target Start/End: Complemental strand, 33303273 - 33302982
Alignment:
Q  36 cacaaatgcatcatttttcactcaaaattaagaaaacagcttttattatacaaaacaaaattaagca--attatattatatgattacagtaaatgatcat 133  Q
    ||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||  |||||||||||||||||||||||||||||||    
T  33303273 cacaaatgcatcatttttcactcaaaattaagaaaacagcttt-attatacaaaacaaaattaagcattattatattatatgattacagtaaatgatcat 33303175  T
Q  134 ccatggtattctgaactgctgtgctatatatctcttacttgtccttcacgttaatatcttgacctccatcttcacctt---taatctgcctttctagatc 230  Q
    |||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||   |||||||||||||||||||    
T  33303174 ccatggtattctgaactgttgtgctatatatctcttacttgtccttcacgttaatatcttgacctccatcttcaccttctttaatctgcctttctagatc 33303075  T
Q  231 agccttcttttccaagagtgcttctaactttgcattcactttttcaagcttctgtttcagcttattaggatcattggtcttatcctttccaga 323  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||    
T  33303074 agccttcttttccaagagtgcttctaactttgcattcactttttcaagcttctgtttcagcttactaggatcattggtcttatcctttccaga 33302982  T

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